vfu_A02807 f23fd3ae171fd212f163e0fdb6f4139e 550 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 271 541 2.2E-75 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 vfu_A02807 f23fd3ae171fd212f163e0fdb6f4139e 550 SUPERFAMILY SSF161098 254 531 5.89E-34 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02807 f23fd3ae171fd212f163e0fdb6f4139e 550 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 536 1.6E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02807 f23fd3ae171fd212f163e0fdb6f4139e 550 Gene3D G3DSA:1.10.3720.10 277 543 1.6E-29 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A03049 319218b4b857ff22c0d9c6f990c7884a 368 Gene3D G3DSA:3.40.50.300 98 356 2.4E-86 T 12-10-2018 vfu_A03049 319218b4b857ff22c0d9c6f990c7884a 368 Gene3D G3DSA:3.30.450.90 1 97 5.7E-21 T 12-10-2018 vfu_A03049 319218b4b857ff22c0d9c6f990c7884a 368 SUPERFAMILY SSF52540 5 334 1.11E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03049 319218b4b857ff22c0d9c6f990c7884a 368 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 9.4E-126 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 vfu_A03049 319218b4b857ff22c0d9c6f990c7884a 368 Pfam PF00437 Type II/IV secretion system protein 116 268 8.3E-36 T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_B01381 13d72d8e3ff59929ea142e07b72b634d 394 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 3.1E-97 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_B01381 13d72d8e3ff59929ea142e07b72b634d 394 SUPERFAMILY SSF51735 42 147 5.0E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01381 13d72d8e3ff59929ea142e07b72b634d 394 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 394 50.847 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_B01381 13d72d8e3ff59929ea142e07b72b634d 394 Gene3D G3DSA:3.40.50.720 1 393 2.3E-165 T 12-10-2018 vfu_B01381 13d72d8e3ff59929ea142e07b72b634d 394 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.9E-25 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_B01381 13d72d8e3ff59929ea142e07b72b634d 394 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 3 81 3.8E-34 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.291 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 117 282 3.3E-56 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 Pfam PF07549 SecD/SecF GG Motif 35 60 7.3E-11 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 3.5E-86 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 Pfam PF02355 Protein export membrane protein 111 292 2.8E-70 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 Gene3D G3DSA:1.20.1640.10 105 299 6.7E-11 T 12-10-2018 vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 SUPERFAMILY SSF82866 74 293 5.49E-40 T 12-10-2018 vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_A02792 6507878b154491dda0ca40b3e759dac2 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_A00688 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00688 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00688 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00688 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00688 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00688 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 12-10-2018 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 588 2.0E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 Pfam PF00672 HAMP domain 291 341 3.4E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 Gene3D G3DSA:1.10.287.950 291 622 2.2E-69 T 12-10-2018 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 SUPERFAMILY SSF103190 69 183 2.51E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 SMART SM00304 291 345 5.1E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 Gene3D G3DSA:3.30.450.20 62 172 5.3E-67 T 12-10-2018 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 SUPERFAMILY SSF58104 313 622 6.93E-73 T 12-10-2018 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 Pfam PF02743 Cache domain 33 253 4.6E-26 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 SMART SM00283 360 621 6.6E-68 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00142 e1835929ad2cd1beebe493dc644589f9 622 Gene3D G3DSA:3.30.450.20 49 264 5.3E-67 T 12-10-2018 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 SUPERFAMILY SSF52540 295 526 7.43E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 Gene3D G3DSA:3.40.50.300 282 535 1.2E-69 T 12-10-2018 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 535 7.3E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 264 1.4E-5 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 SMART SM00382 35 235 3.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 SMART SM00382 312 504 3.8E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 Gene3D G3DSA:3.40.50.300 4 281 1.2E-82 T 12-10-2018 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 SUPERFAMILY SSF52540 6 256 1.57E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 Pfam PF00005 ABC transporter 304 455 1.8E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00812 bc5ea51e016db622c9754e1177a69190 539 Pfam PF00005 ABC transporter 26 185 2.9E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 SUPERFAMILY SSF47413 1 58 4.5E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.8E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 Gene3D G3DSA:1.10.260.40 1 61 2.0E-25 T 12-10-2018 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 2.1E-137 T 12-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 Gene3D G3DSA:3.40.50.2300 155 326 5.7E-25 T 12-10-2018 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 SMART SM00354 1 73 1.3E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 12-10-2018 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 Gene3D G3DSA:3.40.50.2300 62 154 9.9E-20 T 12-10-2018 vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 207 9.2E-13 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_B00273 1c37d2970e7e4d5e867458d98b0239bf 326 SUPERFAMILY SSF53822 61 312 1.39E-37 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A02466 aefc893ccaec7b865a381d350206ddb9 323 SUPERFAMILY SSF53955 8 322 6.94E-102 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A02466 aefc893ccaec7b865a381d350206ddb9 323 Gene3D G3DSA:1.10.8.350 33 199 5.0E-93 T 12-10-2018 vfu_A02466 aefc893ccaec7b865a381d350206ddb9 323 Gene3D G3DSA:1.10.530.10 66 318 5.0E-93 T 12-10-2018 vfu_A02466 aefc893ccaec7b865a381d350206ddb9 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 2.9E-112 T 12-10-2018 IPR011970 Lytic murein transglycosylase vfu_A02466 aefc893ccaec7b865a381d350206ddb9 323 Pfam PF13406 Transglycosylase SLT domain 23 319 5.3E-110 T 12-10-2018 IPR031304 Transglycosylase SLT domain 2 vfu_A02332 7c4bd9a34bc2b7f725e8f58a39133790 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 1.3E-192 T 12-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 vfu_A02332 7c4bd9a34bc2b7f725e8f58a39133790 435 SUPERFAMILY SSF51569 4 424 3.48E-162 T 12-10-2018 vfu_A02332 7c4bd9a34bc2b7f725e8f58a39133790 435 PIRSF PIRSF009264 1 430 6.8E-198 T 12-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 vfu_A02332 7c4bd9a34bc2b7f725e8f58a39133790 435 Gene3D G3DSA:3.20.20.70 8 416 5.2E-171 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02332 7c4bd9a34bc2b7f725e8f58a39133790 435 Gene3D G3DSA:1.10.400.20 288 411 5.2E-171 T 12-10-2018 vfu_A02332 7c4bd9a34bc2b7f725e8f58a39133790 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 3.2E-206 T 12-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 Gene3D G3DSA:2.40.420.20 303 372 2.6E-108 T 12-10-2018 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 Gene3D G3DSA:1.10.287.470 102 175 2.6E-108 T 12-10-2018 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 292 9.4E-15 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 374 4.5E-88 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 Gene3D G3DSA:2.40.50.100 67 211 2.6E-108 T 12-10-2018 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 SUPERFAMILY SSF111369 56 297 2.62E-79 T 12-10-2018 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 Gene3D G3DSA:2.40.30.170 54 302 2.6E-108 T 12-10-2018 vfu_A00236 d700d03b0460479a63fc1a5bf016037b 383 Pfam PF00529 HlyD membrane-fusion protein of T1SS 293 359 5.5E-8 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 Gene3D G3DSA:1.10.10.10 5 70 4.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 Gene3D G3DSA:3.40.190.10 91 281 2.6E-19 T 12-10-2018 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.6E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 SUPERFAMILY SSF53850 87 292 1.24E-27 T 12-10-2018 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 SUPERFAMILY SSF46785 1 110 2.81E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 Pfam PF03466 LysR substrate binding domain 88 291 4.3E-29 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00093 83823ac7e6e50a254a92653338ea2230 304 Gene3D G3DSA:3.40.190.10 163 268 2.6E-19 T 12-10-2018 vfu_A00285 eec5f52b7d71f69f515b5da530e3f987 297 SMART SM00563 85 227 1.3E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A00285 eec5f52b7d71f69f515b5da530e3f987 297 Pfam PF01553 Acyltransferase 73 226 1.2E-12 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A00285 eec5f52b7d71f69f515b5da530e3f987 297 SUPERFAMILY SSF69593 4 283 1.12E-25 T 12-10-2018 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 213 254 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 SUPERFAMILY SSF51182 19 175 1.3E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 SUPERFAMILY SSF46689 212 260 2.82E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 Gene3D G3DSA:2.60.120.10 19 95 1.8E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 Gene3D G3DSA:1.10.10.60 161 262 2.6E-24 T 12-10-2018 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 Pfam PF02311 AraC-like ligand binding domain 30 79 3.9E-6 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 SUPERFAMILY SSF46689 159 210 3.51E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 SMART SM00342 176 258 6.9E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 1.3E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01145 8ff59834d5450f2b764e9c19dae35f03 263 Pfam PF12833 Helix-turn-helix domain 182 260 4.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 Gene3D G3DSA:3.40.50.1000 3 263 5.7E-82 T 12-10-2018 IPR023214 HAD superfamily vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 SUPERFAMILY SSF56784 1 266 1.28E-74 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 6.5E-28 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 12-10-2018 vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 Gene3D G3DSA:3.30.1240.10 86 191 5.7E-82 T 12-10-2018 vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 7.1E-61 T 12-10-2018 IPR000150 Cof family GO:0016787 vfu_A02004 9e72f05969d19d2269de0af237a3b788 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.2E-65 T 12-10-2018 vfu_A02132 b3eed5704d00e8630b0ef3012c4c9635 215 SUPERFAMILY SSF53335 2 213 1.26E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02132 b3eed5704d00e8630b0ef3012c4c9635 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 36.34 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 vfu_A02132 b3eed5704d00e8630b0ef3012c4c9635 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 7.0E-80 T 12-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 vfu_A02132 b3eed5704d00e8630b0ef3012c4c9635 215 Gene3D G3DSA:3.40.50.150 1 215 2.9E-62 T 12-10-2018 vfu_A02132 b3eed5704d00e8630b0ef3012c4c9635 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 7.0E-75 T 12-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 vfu_A02132 b3eed5704d00e8630b0ef3012c4c9635 215 PIRSF PIRSF023956 1 215 2.4E-75 T 12-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.0E-21 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 SUPERFAMILY SSF55653 60 149 9.94E-26 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 4.6E-25 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 9.0E-54 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 Gene3D G3DSA:3.10.430.100 61 149 2.4E-30 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 SUPERFAMILY SSF55658 1 57 1.01E-18 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 Gene3D G3DSA:3.40.5.10 1 50 1.6E-23 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03149 b75629d19a2d9bd766fb2adc87219332 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.823 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01047 9e30593de123ff597250bf606309f07b 423 PIRSF PIRSF000521 3 129 9.3E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01047 9e30593de123ff597250bf606309f07b 423 PIRSF PIRSF000521 121 422 1.2E-42 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01047 9e30593de123ff597250bf606309f07b 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01047 9e30593de123ff597250bf606309f07b 423 Gene3D G3DSA:3.90.1150.10 6 415 3.3E-158 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01047 9e30593de123ff597250bf606309f07b 423 Pfam PF00202 Aminotransferase class-III 20 417 2.6E-130 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01047 9e30593de123ff597250bf606309f07b 423 Gene3D G3DSA:3.40.640.10 58 318 3.3E-158 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01047 9e30593de123ff597250bf606309f07b 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 4.3E-180 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 vfu_A01047 9e30593de123ff597250bf606309f07b 423 SUPERFAMILY SSF53383 17 419 9.82E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 5.2E-26 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 12-10-2018 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Gene3D G3DSA:2.40.40.20 705 828 1.0E-44 T 12-10-2018 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 12-10-2018 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 12-10-2018 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 SUPERFAMILY SSF50692 688 828 7.23E-43 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 SMART SM00926 41 95 8.6E-14 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 SUPERFAMILY SSF53706 38 699 7.33E-200 T 12-10-2018 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 4.5E-92 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 46 63 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 9.8E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00312 2b4a20ecd9ce011656b4eea5b125c2d9 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.469 T 12-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 vfu_A00723 e1720cc626e07d910803feddbdc58aa5 329 Gene3D G3DSA:3.40.190.10 25 299 1.1E-118 T 12-10-2018 vfu_A00723 e1720cc626e07d910803feddbdc58aa5 329 Pfam PF13343 Bacterial extracellular solute-binding protein 76 293 1.3E-19 T 12-10-2018 vfu_A00723 e1720cc626e07d910803feddbdc58aa5 329 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 12 328 2.3E-149 T 12-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 vfu_A00723 e1720cc626e07d910803feddbdc58aa5 329 SUPERFAMILY SSF53850 23 324 7.37E-64 T 12-10-2018 vfu_A00723 e1720cc626e07d910803feddbdc58aa5 329 Gene3D G3DSA:3.40.190.10 125 324 1.1E-118 T 12-10-2018 vfu_A00723 e1720cc626e07d910803feddbdc58aa5 329 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 20 323 8.2E-145 T 12-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 SUPERFAMILY SSF143968 323 460 3.01E-52 T 12-10-2018 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.5E-165 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 Gene3D G3DSA:3.40.1670.10 479 583 3.8E-20 T 12-10-2018 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 Gene3D G3DSA:3.40.1670.10 337 454 3.3E-45 T 12-10-2018 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 Gene3D G3DSA:1.20.5.570 584 617 8.8E-16 T 12-10-2018 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 SUPERFAMILY SSF143968 480 614 6.93E-30 T 12-10-2018 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 3.5E-162 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 480 568 2.3E-15 T 12-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 vfu_A00056 d60a012a37606986269aeb91635ea0d7 617 SUPERFAMILY SSF50475 3 322 2.12E-123 T 12-10-2018 vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 255 273 - T 12-10-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 Gene3D G3DSA:3.90.1150.10 6 460 8.5E-206 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 Pfam PF01212 Beta-eliminating lyase 46 431 2.0E-95 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 PIRSF PIRSF001386 1 465 2.2E-224 T 12-10-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 SUPERFAMILY SSF53383 2 464 6.2E-144 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 Gene3D G3DSA:3.40.640.10 58 326 8.5E-206 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B01026 f7e2024ec15323578be252f90e0f6826 465 Hamap MF_00544 Tryptophanase [tnaA]. 1 465 104.814 T 12-10-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 vfu_A02967 832c39faff13648dae0a9e84ac97d039 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 515 2.5E-210 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 vfu_A02967 832c39faff13648dae0a9e84ac97d039 521 Pfam PF04262 Glutamate-cysteine ligase 13 378 1.6E-167 T 12-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 vfu_A02967 832c39faff13648dae0a9e84ac97d039 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 221.646 T 12-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 vfu_A02967 832c39faff13648dae0a9e84ac97d039 521 Gene3D G3DSA:3.30.590.20 17 521 3.9E-193 T 12-10-2018 vfu_A02967 832c39faff13648dae0a9e84ac97d039 521 SUPERFAMILY SSF55931 7 513 1.05E-201 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 vfu_B00332 f71c40970a6966a24036aa36e283f3c7 382 Gene3D G3DSA:1.20.1090.10 181 381 3.1E-32 T 12-10-2018 vfu_B00332 f71c40970a6966a24036aa36e283f3c7 382 SUPERFAMILY SSF56796 3 380 9.68E-96 T 12-10-2018 vfu_B00332 f71c40970a6966a24036aa36e283f3c7 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 354 2.7E-80 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_B00332 f71c40970a6966a24036aa36e283f3c7 382 Gene3D G3DSA:3.40.50.1970 2 180 1.2E-49 T 12-10-2018 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 Gene3D G3DSA:3.30.479.30 54 185 5.8E-47 T 12-10-2018 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 Pfam PF01145 SPFH domain / Band 7 family 31 199 1.4E-34 T 12-10-2018 IPR001107 Band 7 domain vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 SUPERFAMILY SSF117892 57 190 6.54E-43 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 80 101 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 178 199 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 203 226 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 159 177 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 33 55 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 115 132 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 PRINTS PR00721 Stomatin signature 135 158 2.0E-57 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_B00483 0cad3b57bcd2c1834e3ddc0934ef94ca 265 SMART SM00244 26 183 3.5E-58 T 12-10-2018 IPR001107 Band 7 domain vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.20.19.10 162 361 1.6E-81 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 PIRSF PIRSF036687 1 859 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 1.2E-65 T 12-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 12-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.40.1060.10 385 681 2.4E-149 T 12-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 SUPERFAMILY SSF52016 163 372 3.34E-72 T 12-10-2018 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.2E-98 T 12-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:1.25.40.310 1 161 4.6E-71 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 8.1E-43 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 SUPERFAMILY SSF53732 379 860 3.53E-148 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.30.499.10 683 865 8.5E-73 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 Gene3D G3DSA:3.30.499.10 402 529 2.4E-149 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 vfu_A00899 5aa4a3a60c8d25709b9348deff0d4829 865 SUPERFAMILY SSF74778 2 160 1.57E-67 T 12-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 PRINTS PR00160 Glutaredoxin signature 3 21 1.4E-10 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 PRINTS PR00160 Glutaredoxin signature 66 79 1.4E-10 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 PRINTS PR00160 Glutaredoxin signature 52 65 1.4E-10 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 SUPERFAMILY SSF52833 3 81 3.52E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 Gene3D G3DSA:3.40.30.10 1 84 2.1E-24 T 12-10-2018 vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 8.7E-49 T 12-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 vfu_A02309 1de8e6938ede28c0c948dbb80e83c8e5 88 Pfam PF00462 Glutaredoxin 3 69 9.1E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 vfu_A00297 3cc607522320126aea857bba7e626e21 473 SMART SM00267 300 465 5.8E-27 T 12-10-2018 IPR000160 GGDEF domain vfu_A00297 3cc607522320126aea857bba7e626e21 473 Gene3D G3DSA:3.30.70.270 298 464 3.5E-38 T 12-10-2018 vfu_A00297 3cc607522320126aea857bba7e626e21 473 Gene3D G3DSA:3.30.450.20 72 157 3.5E-8 T 12-10-2018 vfu_A00297 3cc607522320126aea857bba7e626e21 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 311 463 1.5E-28 T 12-10-2018 IPR000160 GGDEF domain vfu_A00297 3cc607522320126aea857bba7e626e21 473 SUPERFAMILY SSF55073 316 462 1.41E-33 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00297 3cc607522320126aea857bba7e626e21 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 313 461 4.6E-29 T 12-10-2018 IPR000160 GGDEF domain vfu_A00297 3cc607522320126aea857bba7e626e21 473 SUPERFAMILY SSF103190 60 162 7.38E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 490 507 2.8E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 507 527 2.8E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 SMART SM00382 213 356 3.6E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 Pfam PF00158 Sigma-54 interaction domain 193 359 1.3E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 Gene3D G3DSA:1.10.8.60 365 444 2.3E-16 T 12-10-2018 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 Gene3D G3DSA:1.10.10.60 457 528 4.2E-12 T 12-10-2018 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 406 415 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 Pfam PF02954 Bacterial regulatory protein, Fis family 484 523 9.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 SUPERFAMILY SSF52540 193 430 3.79E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 Gene3D G3DSA:3.40.50.300 181 364 1.4E-62 T 12-10-2018 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 279 294 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_B01186 dcd1e61ee1cb427ddc08a259342bb0cd 529 SUPERFAMILY SSF46689 408 526 8.24E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 Gene3D G3DSA:1.20.120.220 81 256 6.6E-60 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 SUPERFAMILY SSF81336 85 248 3.27E-44 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 PRINTS PR00123 ATP synthase A subunit signature 235 250 2.4E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 PRINTS PR00123 ATP synthase A subunit signature 90 106 2.4E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 PRINTS PR00123 ATP synthase A subunit signature 188 210 2.4E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 ProSitePatterns PS00449 ATP synthase a subunit signature. 191 200 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 255 15.495 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 Pfam PF00119 ATP synthase A chain 32 248 9.7E-55 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01332 49e0e219d1a0363cbf78ef055b20ed9e 256 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 27 250 1.2E-40 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 SUPERFAMILY SSF47928 3 108 7.98E-20 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 140 159 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 178 1.6E-40 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 180 18.378 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 8.3E-26 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 8.3E-26 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 PRINTS PR00125 ATP synthase delta subunit signature 7 26 8.3E-26 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 PRINTS PR00125 ATP synthase delta subunit signature 77 88 8.3E-26 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 PRINTS PR00125 ATP synthase delta subunit signature 88 102 8.3E-26 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 Gene3D G3DSA:1.10.520.20 2 109 1.2E-26 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01329 47925fe4203f81ea7ad1e6ce27a8779e 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 178 2.6E-44 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00995 1af3c7c7ddfa54f54dee3463e43b735f 125 Gene3D G3DSA:2.40.10.220 1 122 5.3E-29 T 12-10-2018 vfu_A00995 1af3c7c7ddfa54f54dee3463e43b735f 125 Pfam PF07238 PilZ domain 3 100 2.1E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 vfu_A00995 1af3c7c7ddfa54f54dee3463e43b735f 125 PIRSF PIRSF028141 1 120 6.6E-39 T 12-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type vfu_A00995 1af3c7c7ddfa54f54dee3463e43b735f 125 SUPERFAMILY SSF141371 1 120 6.67E-31 T 12-10-2018 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 136 8.3E-32 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 Gene3D G3DSA:3.40.50.720 155 288 3.5E-119 T 12-10-2018 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 5 342 3.0E-179 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 3 342 60.274 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 Gene3D G3DSA:3.90.180.10 22 330 3.5E-119 T 12-10-2018 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 SUPERFAMILY SSF50129 3 175 4.26E-53 T 12-10-2018 IPR011032 GroES-like superfamily vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 Pfam PF00107 Zinc-binding dehydrogenase 176 303 3.5E-27 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 SUPERFAMILY SSF51735 143 307 1.02E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00562 a3a076561f8b374deb77dca69966dcc5 343 SMART SM00829 14 340 4.8E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 vfu_A02656 40fcb86c6d1f293233c3a71d31033fc0 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.09 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 vfu_A02656 40fcb86c6d1f293233c3a71d31033fc0 92 SUPERFAMILY SSF117991 7 92 7.98E-31 T 12-10-2018 IPR027471 YbeD-like domain superfamily vfu_A02656 40fcb86c6d1f293233c3a71d31033fc0 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 1.4E-28 T 12-10-2018 IPR007454 Uncharacterised protein family UPF0250 vfu_A02656 40fcb86c6d1f293233c3a71d31033fc0 92 Gene3D G3DSA:3.30.70.260 6 92 1.3E-32 T 12-10-2018 vfu_A02821 315ae38cfd335b95d8371c5726f8fc7e 188 Gene3D G3DSA:2.30.130.40 1 106 5.7E-27 T 12-10-2018 vfu_A02821 315ae38cfd335b95d8371c5726f8fc7e 188 SMART SM00464 2 185 0.0028 T 12-10-2018 IPR003111 Lon, substrate-binding domain vfu_A02821 315ae38cfd335b95d8371c5726f8fc7e 188 Gene3D G3DSA:1.10.4060.10 117 187 1.8E-5 T 12-10-2018 vfu_A02821 315ae38cfd335b95d8371c5726f8fc7e 188 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 130 5.9E-15 T 12-10-2018 IPR003111 Lon, substrate-binding domain vfu_A02821 315ae38cfd335b95d8371c5726f8fc7e 188 SUPERFAMILY SSF88697 2 184 7.21E-46 T 12-10-2018 IPR015947 PUA-like superfamily vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 47.006 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 9.1E-138 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 SUPERFAMILY SSF51556 1 341 3.4E-147 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 Pfam PF01979 Amidohydrolase family 11 317 1.0E-19 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 Gene3D G3DSA:3.20.20.140 2 342 9.7E-115 T 12-10-2018 vfu_B01275 6227a0bd0a923785a49ba33479bddcb0 342 PIRSF PIRSF001237 1 342 3.1E-143 T 12-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02125 756b134c1453fb378545a7531247d040 901 Gene3D G3DSA:3.30.70.270 477 616 8.1E-15 T 12-10-2018 vfu_A02125 756b134c1453fb378545a7531247d040 901 Pfam PF00563 EAL domain 651 889 5.3E-72 T 12-10-2018 IPR001633 EAL domain vfu_A02125 756b134c1453fb378545a7531247d040 901 SMART SM00267 467 623 1.4E-4 T 12-10-2018 IPR000160 GGDEF domain vfu_A02125 756b134c1453fb378545a7531247d040 901 SUPERFAMILY SSF141868 651 897 8.37E-78 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02125 756b134c1453fb378545a7531247d040 901 Pfam PF00990 Diguanylate cyclase, GGDEF domain 479 589 5.3E-10 T 12-10-2018 IPR000160 GGDEF domain vfu_A02125 756b134c1453fb378545a7531247d040 901 Gene3D G3DSA:3.30.450.20 344 476 1.1E-16 T 12-10-2018 vfu_A02125 756b134c1453fb378545a7531247d040 901 Pfam PF05228 CHASE4 domain 58 208 2.3E-27 T 12-10-2018 IPR007892 CHASE4 vfu_A02125 756b134c1453fb378545a7531247d040 901 SUPERFAMILY SSF55073 484 614 3.3E-12 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A02125 756b134c1453fb378545a7531247d040 901 SMART SM00052 645 894 7.8E-97 T 12-10-2018 IPR001633 EAL domain vfu_A02125 756b134c1453fb378545a7531247d040 901 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 356 472 2.5E-10 T 12-10-2018 IPR000014 PAS domain vfu_A02125 756b134c1453fb378545a7531247d040 901 Gene3D G3DSA:3.20.20.450 648 899 5.0E-86 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02125 756b134c1453fb378545a7531247d040 901 SUPERFAMILY SSF55785 347 465 5.71E-13 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02125 756b134c1453fb378545a7531247d040 901 Pfam PF13426 PAS domain 368 466 8.3E-10 T 12-10-2018 IPR000014 PAS domain vfu_A02125 756b134c1453fb378545a7531247d040 901 SMART SM00091 357 422 8.6E-4 T 12-10-2018 IPR000014 PAS domain vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 3.6E-5 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 3.6E-5 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.4E-53 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 SUPERFAMILY SSF52317 1 191 1.13E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 Gene3D G3DSA:3.40.50.880 1 192 1.6E-61 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.6E-36 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.6E-36 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.6E-36 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.6E-36 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.6E-36 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 4.6E-36 T 12-10-2018 vfu_A00643 8a482189b5f601ecc9b05c7940ad0af6 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 7.5E-87 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 SUPERFAMILY SSF101386 139 240 1.29E-23 T 12-10-2018 vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 Gene3D G3DSA:1.10.287.1080 3 126 4.6E-44 T 12-10-2018 vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 5.9E-26 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 229 1.4E-6 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.4E-101 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 SUPERFAMILY SSF101386 2 105 6.11E-23 T 12-10-2018 vfu_A00844 95237c0b3e8a2326bf228595c20d66ec 266 Gene3D G3DSA:1.10.287.1080 132 265 2.6E-44 T 12-10-2018 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 PIRSF PIRSF001357 5 253 9.1E-77 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 53.011 T 12-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 SUPERFAMILY SSF51569 6 246 1.99E-82 T 12-10-2018 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 Pfam PF01791 DeoC/LacD family aldolase 11 239 3.0E-47 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 1.8E-80 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 Gene3D G3DSA:3.20.20.70 1 249 1.5E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02881 cdac39e4878c541bb6dc4d9207a8c71a 259 SMART SM01133 10 245 1.7E-80 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 SMART SM00304 174 226 4.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 SUPERFAMILY SSF47384 221 282 1.51E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 Pfam PF00672 HAMP domain 174 222 6.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 2.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 2.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 2.4E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 SMART SM00387 326 435 2.5E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 Gene3D G3DSA:1.10.287.130 172 282 6.3E-23 T 12-10-2018 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 SMART SM00388 227 287 1.7E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 281 3.3E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 SUPERFAMILY SSF55874 289 434 4.06E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 Gene3D G3DSA:3.30.565.10 289 435 8.3E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 433 2.9E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00539 41dc7ec918964033f0a12432ed79af69 435 SUPERFAMILY SSF158472 176 222 9.68E-5 T 12-10-2018 vfu_A01601 b818177c6790cf6f7d599b6b86bc1e58 188 SUPERFAMILY SSF46785 4 176 8.6E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01601 b818177c6790cf6f7d599b6b86bc1e58 188 Gene3D G3DSA:1.10.10.10 3 88 4.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01601 b818177c6790cf6f7d599b6b86bc1e58 188 Pfam PF03551 Transcriptional regulator PadR-like family 8 80 4.0E-15 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal vfu_A01601 b818177c6790cf6f7d599b6b86bc1e58 188 Pfam PF10400 Virulence activator alpha C-term 95 173 8.4E-16 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Pfam PF00037 4Fe-4S binding domain 446 467 5.6E-7 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Pfam PF00037 4Fe-4S binding domain 418 435 7.8E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Gene3D G3DSA:3.30.70.20 164 254 4.4E-12 T 12-10-2018 vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Gene3D G3DSA:3.30.70.20 412 485 2.4E-12 T 12-10-2018 vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 2.9E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A01881 2d3c3784cc46beb3ab3bd9854b23b1f0 553 SUPERFAMILY SSF54862 159 511 1.62E-36 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 4.8E-28 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 4.8E-28 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 4.8E-28 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 4.8E-28 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 4.8E-28 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 4.8E-28 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF56784 460 757 7.73E-52 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Pfam PF00122 E1-E2 ATPase 262 442 4.0E-49 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF81665 214 745 5.75E-19 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Pfam PF00403 Heavy-metal-associated domain 74 132 2.5E-10 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 211 759 6.3E-177 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF55008 67 134 1.14E-14 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:2.70.150.20 261 365 5.4E-33 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 234 735 1.1E-86 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.30.70.100 69 140 7.8E-15 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.40.1110.10 473 591 6.0E-84 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 211 567 9.6E-97 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Pfam PF00702 haloacid dehalogenase-like hydrolase 458 671 7.0E-41 T 12-10-2018 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 246 266 4.3E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 73 82 4.3E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 84 105 4.3E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 4.3E-8 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 SUPERFAMILY SSF81653 264 361 4.84E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 Gene3D G3DSA:3.40.50.1000 443 709 6.0E-84 T 12-10-2018 IPR023214 HAD superfamily vfu_A02571 6b9d2e12ac14cba93f16afaebf30fd7a 764 ProSitePatterns PS01047 Heavy-metal-associated domain. 75 104 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 Pfam PF00343 Carbohydrate phosphorylase 100 812 0.0 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 Gene3D G3DSA:3.40.50.2000 475 797 1.5E-145 T 12-10-2018 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 12-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 SUPERFAMILY SSF53756 8 815 0.0 T 12-10-2018 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 12-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 Gene3D G3DSA:3.40.50.2000 5 474 1.2E-191 T 12-10-2018 vfu_B01007 620320a4dc5e7553ddde4c69e2c8a375 817 PIRSF PIRSF000460 1 817 3.8E-216 T 12-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 vfu_B00940 819afc15be17ce9fbbbad942abd8e2ac 211 SUPERFAMILY SSF51735 1 207 7.59E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00940 819afc15be17ce9fbbbad942abd8e2ac 211 Gene3D G3DSA:3.40.50.720 1 209 8.0E-50 T 12-10-2018 vfu_B00940 819afc15be17ce9fbbbad942abd8e2ac 211 Pfam PF13460 NAD(P)H-binding 7 196 2.1E-34 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A00373 ec0608092e3d231c967869ca54a21869 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 8.5E-171 T 12-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 vfu_A00373 ec0608092e3d231c967869ca54a21869 370 Gene3D G3DSA:3.20.20.70 12 366 1.0E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00373 ec0608092e3d231c967869ca54a21869 370 Pfam PF04055 Radical SAM superfamily 81 219 5.4E-10 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A00373 ec0608092e3d231c967869ca54a21869 370 SMART SM00876 256 359 9.6E-30 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_A00373 ec0608092e3d231c967869ca54a21869 370 SUPERFAMILY SSF102114 37 343 2.35E-53 T 12-10-2018 vfu_A00373 ec0608092e3d231c967869ca54a21869 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 4.1E-23 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 Gene3D G3DSA:3.40.50.300 205 422 7.8E-66 T 12-10-2018 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 Pfam PF07724 AAA domain (Cdc48 subfamily) 251 418 3.5E-41 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 Gene3D G3DSA:3.40.50.300 9 199 2.0E-45 T 12-10-2018 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 424 496 5.7E-11 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 Gene3D G3DSA:1.10.8.60 424 516 5.0E-11 T 12-10-2018 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 256 274 2.4E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 301 319 2.4E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 363 377 2.4E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 330 348 2.4E-30 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 SUPERFAMILY SSF52540 1 169 8.93E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 SMART SM00382 252 423 5.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 SMART SM01086 424 519 1.4E-4 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_B00786 6ef752c941cd7e54fb213bf50a97c17c 522 SUPERFAMILY SSF52540 201 491 1.67E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04545 Sigma-70, region 4 562 615 1.9E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04546 Sigma-70, non-essential region 139 363 7.2E-67 T 12-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04542 Sigma-70 region 2 394 463 1.8E-21 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.10.10 467 543 2.7E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.220.120 1 64 2.6E-29 T 12-10-2018 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF04539 Sigma-70 region 3 473 548 1.4E-28 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 390 626 1.9E-120 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 SUPERFAMILY SSF88659 467 540 2.28E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 627 46.299 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.601.10 113 463 1.8E-138 T 12-10-2018 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 390 615 1.2E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 SUPERFAMILY SSF88659 524 626 1.13E-25 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 418 431 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 3.5E-28 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Gene3D G3DSA:1.10.10.10 544 628 3.3E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 587 602 3.4E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 418 431 3.4E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 442 450 3.4E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 566 578 3.4E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 PRINTS PR00046 Major sigma-70 factor signature 602 613 3.4E-31 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 587 613 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02999 733573a6cba0c20889b1a554dfc87e13 628 SUPERFAMILY SSF88946 115 461 1.91E-98 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_B00172 a9d39c63112f9f7fb503053276e49df8 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 215 1.6E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00172 a9d39c63112f9f7fb503053276e49df8 222 SUPERFAMILY SSF161098 15 202 3.01E-43 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00172 a9d39c63112f9f7fb503053276e49df8 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 111 3.4E-32 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_B00172 a9d39c63112f9f7fb503053276e49df8 222 Gene3D G3DSA:1.10.3720.10 3 216 6.5E-53 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 SMART SM00382 278 472 1.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 SMART SM00382 30 225 0.9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 SUPERFAMILY SSF52540 268 480 7.37E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 Pfam PF00005 ABC transporter 21 170 1.4E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 Gene3D G3DSA:3.40.50.300 1 253 1.4E-51 T 12-10-2018 vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 SUPERFAMILY SSF52540 4 229 3.07E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 Pfam PF00005 ABC transporter 270 423 1.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 Gene3D G3DSA:3.40.50.300 266 495 1.4E-46 T 12-10-2018 vfu_B01196 6ce07c7006779855d33ca2ada0b33386 501 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 Gene3D G3DSA:3.40.50.300 1 139 1.5E-49 T 12-10-2018 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 Gene3D G3DSA:1.20.272.10 213 337 2.7E-42 T 12-10-2018 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 Gene3D G3DSA:1.10.8.60 144 212 5.6E-21 T 12-10-2018 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 332 1.1E-37 T 12-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 SUPERFAMILY SSF52540 1 208 4.78E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 Pfam PF06144 DNA polymerase III, delta subunit 20 189 2.8E-45 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 7.1E-106 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 vfu_A02648 ae1143647bee743b62d38fcca4c47680 341 SUPERFAMILY SSF48019 211 333 8.33E-35 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 Gene3D G3DSA:3.20.20.70 2 329 1.7E-78 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 SUPERFAMILY SSF102114 7 278 2.88E-66 T 12-10-2018 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 6.0E-8 T 12-10-2018 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.133 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 2.6E-38 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 SMART SM00729 14 220 7.7E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 Pfam PF04055 Radical SAM superfamily 19 181 6.0E-23 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02578 86ee3eea0e1790e643a44055cce16d2e 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.5E-102 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 443 598 1.2E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.70.270 443 604 2.1E-46 T 12-10-2018 vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.450.20 329 442 6.5E-18 T 12-10-2018 vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.450.20 57 189 3.4E-19 T 12-10-2018 vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF103190 190 279 9.42E-16 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 441 2.9E-13 T 12-10-2018 IPR000014 PAS domain vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Pfam PF13426 PAS domain 333 433 7.9E-9 T 12-10-2018 IPR000014 PAS domain vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:1.20.5.170 10 56 6.1E-25 T 12-10-2018 vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF55073 450 600 1.18E-40 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Pfam PF00990 Diguanylate cyclase, GGDEF domain 447 595 9.2E-38 T 12-10-2018 IPR000160 GGDEF domain vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF103190 21 189 9.42E-32 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 SMART SM00267 434 599 7.2E-47 T 12-10-2018 IPR000160 GGDEF domain vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 Gene3D G3DSA:3.30.450.20 190 283 3.2E-24 T 12-10-2018 vfu_A03028 5f09c032212f00e52dc4168e43e2e128 606 SUPERFAMILY SSF55785 333 443 1.29E-16 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A01898 3a0aaebf307ec88d5d2a567d3f29e748 310 Gene3D G3DSA:3.40.50.620 3 262 3.6E-50 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01898 3a0aaebf307ec88d5d2a567d3f29e748 310 SUPERFAMILY SSF52402 29 255 3.05E-56 T 12-10-2018 vfu_A01898 3a0aaebf307ec88d5d2a567d3f29e748 310 PIRSF PIRSF004976 2 272 2.1E-76 T 12-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 vfu_A01898 3a0aaebf307ec88d5d2a567d3f29e748 310 Pfam PF01171 PP-loop family 43 204 2.3E-15 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 vfu_A01898 3a0aaebf307ec88d5d2a567d3f29e748 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.745 T 12-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Gene3D G3DSA:1.10.287.470 189 219 3.4E-13 T 12-10-2018 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Gene3D G3DSA:2.40.50.100 62 96 1.2E-7 T 12-10-2018 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Gene3D G3DSA:2.40.30.170 256 344 3.4E-13 T 12-10-2018 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 SUPERFAMILY SSF111369 61 136 9.02E-8 T 12-10-2018 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Gene3D G3DSA:2.40.50.100 220 255 3.4E-13 T 12-10-2018 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Pfam PF13533 Biotin-lipoyl like 64 111 1.2E-5 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Gene3D G3DSA:1.10.287.470 97 116 1.2E-7 T 12-10-2018 vfu_B01057 5a4eb62ed400988de71df760b1424896 376 Gene3D G3DSA:1.10.287.470 120 185 1.3E-9 T 12-10-2018 vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 Pfam PF03466 LysR substrate binding domain 87 288 2.3E-48 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 SUPERFAMILY SSF46785 1 85 4.67E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 Gene3D G3DSA:1.10.10.10 1 83 3.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 Gene3D G3DSA:3.40.190.290 90 292 1.9E-53 T 12-10-2018 vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.5E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01323 58fb362d175dd6c7f226403d97aa57d5 293 SUPERFAMILY SSF53850 90 290 9.05E-45 T 12-10-2018 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 79 165 2.5E-19 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 73 681 3.4E-252 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 SMART SM00642 208 553 3.2E-6 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 586 683 6.5E-19 T 12-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 SUPERFAMILY SSF51011 581 683 2.16E-29 T 12-10-2018 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 SUPERFAMILY SSF51445 137 574 5.16E-109 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Gene3D G3DSA:2.60.40.1180 581 683 1.1E-30 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 PIRSF PIRSF000463 1 685 2.0E-281 T 12-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 49 684 41.771 T 12-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Pfam PF00128 Alpha amylase, catalytic domain 233 307 2.7E-7 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Gene3D G3DSA:2.60.40.10 1 179 3.2E-44 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 SUPERFAMILY SSF81296 96 151 2.8E-7 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_B01009 1d2ff23405907642a169a6a5346e61f3 685 Gene3D G3DSA:3.20.20.80 182 580 2.1E-163 T 12-10-2018 vfu_B00819 698321917c8d3416f6108ab5af6325c2 243 Gene3D G3DSA:1.10.10.60 148 243 6.9E-18 T 12-10-2018 vfu_B00819 698321917c8d3416f6108ab5af6325c2 243 SUPERFAMILY SSF46689 191 240 3.63E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00819 698321917c8d3416f6108ab5af6325c2 243 SMART SM00342 163 238 2.0E-8 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00819 698321917c8d3416f6108ab5af6325c2 243 Pfam PF12833 Helix-turn-helix domain 166 239 8.4E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01255 d960a006c80eaca80b79a658db5c8609 238 PIRSF PIRSF002884 13 238 1.1E-90 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 vfu_A01255 d960a006c80eaca80b79a658db5c8609 238 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 238 1.1E-78 T 12-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 vfu_A01255 d960a006c80eaca80b79a658db5c8609 238 SUPERFAMILY SSF75708 26 237 8.37E-67 T 12-10-2018 vfu_A01255 d960a006c80eaca80b79a658db5c8609 238 Gene3D G3DSA:1.10.287.500 56 189 1.2E-46 T 12-10-2018 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 Gene3D G3DSA:3.60.20.10 2 411 1.1E-156 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 Pfam PF13522 Glutamine amidotransferase domain 64 207 1.5E-17 T 12-10-2018 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 Pfam PF00156 Phosphoribosyl transferase domain 292 389 1.1E-6 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 3.0E-165 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 SUPERFAMILY SSF53271 249 482 1.27E-70 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.518 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 PIRSF PIRSF000485 1 480 2.7E-168 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 Gene3D G3DSA:3.40.50.2020 276 440 1.1E-156 T 12-10-2018 vfu_A02597 1f9613b954c14e350ef424587adb63b4 504 SUPERFAMILY SSF56235 2 256 9.44E-71 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02620 e8474b8f8c00e2be3780a2f4905ba6a0 135 Gene3D G3DSA:3.10.580.10 2 134 7.4E-26 T 12-10-2018 vfu_A02620 e8474b8f8c00e2be3780a2f4905ba6a0 135 Pfam PF00571 CBS domain 78 125 3.2E-9 T 12-10-2018 IPR000644 CBS domain vfu_A02620 e8474b8f8c00e2be3780a2f4905ba6a0 135 SMART SM00116 16 65 11.0 T 12-10-2018 IPR000644 CBS domain vfu_A02620 e8474b8f8c00e2be3780a2f4905ba6a0 135 SMART SM00116 83 130 8.6E-5 T 12-10-2018 IPR000644 CBS domain vfu_A02620 e8474b8f8c00e2be3780a2f4905ba6a0 135 SUPERFAMILY SSF54631 5 126 1.04E-23 T 12-10-2018 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 ProSitePatterns PS00331 Malic enzymes signature. 261 277 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 Pfam PF00390 Malic enzyme, N-terminal domain 75 254 1.0E-77 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 SUPERFAMILY SSF53223 6 264 1.15E-107 T 12-10-2018 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 SMART SM00919 265 525 1.6E-121 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 SMART SM01274 75 255 1.3E-103 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 Pfam PF03949 Malic enzyme, NAD binding domain 265 525 4.7E-98 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 Gene3D G3DSA:3.40.50.10380 9 262 2.8E-114 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 Gene3D G3DSA:3.40.50.720 263 558 4.6E-103 T 12-10-2018 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PIRSF PIRSF000106 2 557 6.0E-220 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 SUPERFAMILY SSF51735 265 556 2.23E-88 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 236 254 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 292 308 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 141 170 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 261 277 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 403 419 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 81 105 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01702 7c0751e0aa90466b6eb7c82ec1882985 559 PRINTS PR00072 Malic enzyme signature 177 199 1.1E-74 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 SMART SM00481 7 74 1.6E-23 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF02811 PHP domain 8 172 1.8E-39 T 12-10-2018 IPR004013 PHP domain GO:0003824 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Gene3D G3DSA:2.40.50.140 986 1072 5.6E-8 T 12-10-2018 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 SUPERFAMILY SSF89550 5 263 1.53E-12 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Gene3D G3DSA:1.10.10.1600 433 510 6.3E-33 T 12-10-2018 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.4E-24 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 2.1E-10 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 735 1.5E-176 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01084 4cfb491dd00ba5367f8e6b1d16b32f6c 1159 Gene3D G3DSA:3.20.20.140 1 270 8.5E-92 T 12-10-2018 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 SUPERFAMILY SSF51011 384 448 1.69E-7 T 12-10-2018 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 Gene3D G3DSA:3.20.20.80 4 377 2.7E-78 T 12-10-2018 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 Pfam PF00128 Alpha amylase, catalytic domain 24 239 6.5E-18 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 SUPERFAMILY SSF51445 8 343 8.13E-59 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B00689 3ea83666caee0d383677af1197d8056d 457 PRINTS PR00110 Alpha-amylase signature 228 246 1.4E-13 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 PRINTS PR00110 Alpha-amylase signature 199 210 1.4E-13 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 PRINTS PR00110 Alpha-amylase signature 294 306 1.4E-13 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 PRINTS PR00110 Alpha-amylase signature 86 97 1.4E-13 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 PRINTS PR00110 Alpha-amylase signature 53 70 1.4E-13 T 12-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 vfu_B00689 3ea83666caee0d383677af1197d8056d 457 SMART SM00642 8 372 1.3E-24 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 4.2E-21 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 287 307 2.3E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 211 228 2.3E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 487 506 2.3E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 36 54 2.3E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 242 265 2.3E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 PRINTS PR01607 Apyrase family signature 420 443 2.3E-52 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 512 4.3E-33 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Gene3D G3DSA:3.90.780.10 366 552 2.1E-58 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 SUPERFAMILY SSF56300 31 364 5.36E-100 T 12-10-2018 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 SUPERFAMILY SSF55816 366 542 2.35E-51 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A01148 0fbfc34ebcba7bc472ddadb37dafa2b8 554 Gene3D G3DSA:3.60.21.10 30 365 2.9E-129 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_B00721 e9e50f3477b15e88ad8a7ea13b8a94f4 139 Pfam PF00582 Universal stress protein family 3 138 1.2E-12 T 12-10-2018 IPR006016 UspA vfu_B00721 e9e50f3477b15e88ad8a7ea13b8a94f4 139 SUPERFAMILY SSF52402 3 138 4.1E-23 T 12-10-2018 vfu_B00721 e9e50f3477b15e88ad8a7ea13b8a94f4 139 PIRSF PIRSF006276 1 139 1.9E-44 T 12-10-2018 IPR006015 Universal stress protein A vfu_B00721 e9e50f3477b15e88ad8a7ea13b8a94f4 139 Gene3D G3DSA:3.40.50.620 2 139 3.2E-35 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 SUPERFAMILY SSF52540 310 518 1.68E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Gene3D G3DSA:1.10.287.380 554 637 2.6E-28 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Gene3D G3DSA:3.40.50.300 281 550 2.7E-66 T 12-10-2018 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF12848 ABC transporter 224 294 4.4E-12 T 12-10-2018 IPR032781 ABC-transporter extension domain vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF00005 ABC transporter 19 185 3.3E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF16326 ABC transporter C-terminal domain 564 632 1.3E-21 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Gene3D G3DSA:3.40.50.300 11 279 7.8E-67 T 12-10-2018 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 Pfam PF00005 ABC transporter 336 469 1.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 SMART SM00382 344 514 1.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 SMART SM00382 28 230 1.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01925 6b81e2059fee3fbde8813dc0d8a5a276 638 SUPERFAMILY SSF52540 3 240 5.59E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF05188 MutS domain II 128 253 1.9E-31 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 SMART SM00533 283 590 1.6E-114 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF48334 267 564 7.72E-95 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF53150 114 266 4.32E-41 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF01624 MutS domain I 8 119 4.6E-41 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:3.40.1170.10 1 121 9.0E-52 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 845 25.464 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 PIRSF PIRSF037677 2 180 9.5E-26 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 PIRSF PIRSF037677 189 833 1.5E-129 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 SMART SM00534 606 793 6.5E-117 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 851 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:3.40.50.300 567 851 1.9E-99 T 12-10-2018 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF05190 MutS family domain IV 427 517 7.6E-31 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF55271 4 113 6.28E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 SUPERFAMILY SSF52540 566 797 1.04E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:3.30.420.110 127 261 2.5E-36 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:1.10.1420.10 266 558 9.8E-107 T 12-10-2018 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF05192 MutS domain III 269 558 2.1E-42 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Pfam PF00488 MutS domain V 609 796 2.3E-86 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 vfu_A02981 88d17b5052aba38efa74ccbdd7bc31ee 853 Gene3D G3DSA:1.10.1420.10 386 502 9.8E-107 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:2.20.25.90 2 52 1.7E-10 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:1.10.10.1100 812 865 6.3E-13 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 SUPERFAMILY SSF53706 7 562 1.83E-166 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 SMART SM00926 3 52 1.5E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF01568 Molydopterin dinucleotide binding domain 573 683 9.4E-19 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 8 50 2.2E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 PIRSF PIRSF036643 1 704 5.3E-123 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:3.40.228.10 129 332 7.0E-159 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF04324 BFD-like [2Fe-2S] binding domain 812 861 4.4E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:3.40.50.740 64 538 7.0E-159 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Gene3D G3DSA:2.40.40.20 567 691 2.4E-21 T 12-10-2018 vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 SUPERFAMILY SSF50692 548 690 1.08E-23 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_A01556 27c97e3adafdf856a3b9101e45e8c0ce 871 Pfam PF00384 Molybdopterin oxidoreductase 64 476 1.1E-71 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A00126 e95dc5f52820ebdda5e1e56507ff58eb 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 509 712 6.9E-51 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 vfu_A00126 e95dc5f52820ebdda5e1e56507ff58eb 720 Pfam PF02706 Chain length determinant protein 15 107 2.6E-21 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 vfu_A00126 e95dc5f52820ebdda5e1e56507ff58eb 720 SUPERFAMILY SSF52540 527 704 6.06E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00126 e95dc5f52820ebdda5e1e56507ff58eb 720 Gene3D G3DSA:3.40.50.300 442 720 8.5E-79 T 12-10-2018 vfu_A00126 e95dc5f52820ebdda5e1e56507ff58eb 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 369 449 1.4E-34 T 12-10-2018 IPR032807 Tyrosine kinase, G-rich domain vfu_A00126 e95dc5f52820ebdda5e1e56507ff58eb 720 Pfam PF13614 AAA domain 538 651 6.0E-11 T 12-10-2018 IPR025669 AAA domain vfu_B00246 65128a4a7317996a3bd876b26af5db45 189 Hamap MF_00780 Protein YceI [yceI]. 1 189 43.654 T 12-10-2018 IPR023480 Uncharacterised protein family UPF0312/YceI vfu_B00246 65128a4a7317996a3bd876b26af5db45 189 Pfam PF04264 YceI-like domain 25 173 8.5E-37 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like vfu_B00246 65128a4a7317996a3bd876b26af5db45 189 SMART SM00867 24 187 1.4E-63 T 12-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like vfu_B00246 65128a4a7317996a3bd876b26af5db45 189 Gene3D G3DSA:2.40.128.110 23 188 1.3E-49 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily vfu_B00246 65128a4a7317996a3bd876b26af5db45 189 SUPERFAMILY SSF101874 23 184 5.75E-51 T 12-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily vfu_A01741 9b0065a50dd98d332e2cc975e3a6e924 235 Gene3D G3DSA:3.40.50.150 11 234 1.7E-76 T 12-10-2018 vfu_A01741 9b0065a50dd98d332e2cc975e3a6e924 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 235 37.362 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 vfu_A01741 9b0065a50dd98d332e2cc975e3a6e924 235 Pfam PF13489 Methyltransferase domain 52 194 3.7E-25 T 12-10-2018 vfu_A01741 9b0065a50dd98d332e2cc975e3a6e924 235 SUPERFAMILY SSF53335 15 231 7.33E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01741 9b0065a50dd98d332e2cc975e3a6e924 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 2.3E-87 T 12-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 SUPERFAMILY SSF46929 159 204 2.62E-12 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 SUPERFAMILY SSF50249 2 63 3.94E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Gene3D G3DSA:1.10.8.10 158 205 8.3E-23 T 12-10-2018 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 6.3E-65 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Pfam PF07499 RuvA, C-terminal domain 161 204 7.4E-18 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.6E-14 T 12-10-2018 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Gene3D G3DSA:1.10.150.20 67 143 4.1E-26 T 12-10-2018 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Pfam PF01330 RuvA N terminal domain 2 62 3.4E-21 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Gene3D G3DSA:2.40.50.140 1 65 2.5E-27 T 12-10-2018 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.658 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 SMART SM00278 108 127 0.071 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 SMART SM00278 73 92 160.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02352 119e2bf008f69aea1dc487c1305da866 205 SUPERFAMILY SSF47781 66 136 4.89E-20 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A00144 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 SUPERFAMILY SSF56112 47 235 8.77E-20 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_A00144 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 Gene3D G3DSA:1.10.510.10 139 237 1.8E-15 T 12-10-2018 vfu_A00144 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 235 42.449 T 12-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 vfu_A00144 1c97e29cacb5f90bf4a0fdf4d3b32cd0 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 31 233 1.1E-68 T 12-10-2018 vfu_A02744 353d0b942469ab17f00a7c05070a113e 182 SUPERFAMILY SSF49401 36 182 7.46E-31 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_A02744 353d0b942469ab17f00a7c05070a113e 182 Gene3D G3DSA:2.60.40.1090 35 182 3.9E-31 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 PRINTS PR00050 Cold shock protein signature 3 18 3.0E-7 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 PRINTS PR00050 Cold shock protein signature 38 56 3.0E-7 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 PRINTS PR00050 Cold shock protein signature 24 33 3.0E-7 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 Pfam PF00313 'Cold-shock' DNA-binding domain 2 64 1.7E-16 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 Gene3D G3DSA:2.40.50.140 1 69 3.4E-20 T 12-10-2018 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 Pfam PF06961 Protein of unknown function (DUF1294) 106 160 1.4E-21 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 SUPERFAMILY SSF50249 2 66 1.82E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B01354 3e61ab089340c93cf566caa8e51d2ed9 195 SMART SM00357 2 66 3.0E-14 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:1.10.10.160 79 187 6.6E-125 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:1.10.10.990 883 959 3.3E-20 T 12-10-2018 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1162 20.767 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:3.40.50.300 349 822 5.4E-193 T 12-10-2018 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:3.40.50.10930 4 331 6.6E-125 T 12-10-2018 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 PIRSF PIRSF000980 1 1163 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1125 0.0 T 12-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Gene3D G3DSA:1.10.486.10 467 679 5.4E-193 T 12-10-2018 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 SUPERFAMILY SSF52980 843 1151 1.18E-71 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 SUPERFAMILY SSF52540 380 824 7.22E-102 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 SUPERFAMILY SSF52540 2 361 1.26E-122 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02835 9f8b977951317e5617202bad63dd4601 1173 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 820 9.7E-300 T 12-10-2018 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 SMART SM00963 1 86 1.4E-36 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 5.3E-180 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.334 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 SUPERFAMILY SSF52540 42 353 8.76E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Gene3D G3DSA:3.40.50.300 90 285 7.6E-123 T 12-10-2018 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.9E-22 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 4.4E-74 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 SMART SM00382 99 247 1.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Gene3D G3DSA:1.10.260.30 328 452 4.1E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 SMART SM00962 100 296 5.9E-115 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Gene3D G3DSA:1.20.120.140 4 305 7.6E-123 T 12-10-2018 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 SUPERFAMILY SSF47446 329 430 2.94E-38 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 vfu_A02961 460f0ac8341a8a18371cfd8e416ba00d 459 Pfam PF02978 Signal peptide binding domain 329 427 1.3E-33 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 SUPERFAMILY SSF103190 50 187 1.96E-29 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:3.30.565.10 441 595 7.8E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.4E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 439 4.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 3.0E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 PIRSF PIRSF036431 1 599 1.3E-187 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 SMART SM00387 484 592 4.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 SUPERFAMILY SSF47384 357 440 1.35E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 SMART SM00388 373 441 1.0E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:3.30.450.20 57 173 2.3E-38 T 12-10-2018 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 SUPERFAMILY SSF55874 441 594 5.5E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:3.30.450.20 174 284 3.8E-36 T 12-10-2018 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:3.30.450.20 27 56 6.5E-7 T 12-10-2018 vfu_A02432 320e8a3803b0ba6d9d556c7e9da4c065 602 Gene3D G3DSA:1.10.287.130 349 436 3.8E-20 T 12-10-2018 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 Pfam PF14814 Bifunctional transglycosylase second domain 85 168 8.7E-26 T 12-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:3.40.710.10 75 732 4.3E-259 T 12-10-2018 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 Pfam PF00905 Penicillin binding protein transpeptidase domain 444 682 7.0E-22 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 PIRSF PIRSF002799 10 782 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 Pfam PF00912 Transglycosylase 181 352 2.2E-59 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 185 719 4.1E-154 T 12-10-2018 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:1.10.3810.10 173 376 4.3E-259 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 SUPERFAMILY SSF56601 334 758 1.36E-106 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 Gene3D G3DSA:3.30.2060.10 83 172 4.3E-259 T 12-10-2018 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 40 761 0.0 T 12-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00897 1c5e9f428823948a7819d74d15df8702 782 SUPERFAMILY SSF53955 181 375 2.81E-69 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 SMART SM00267 158 330 6.3E-36 T 12-10-2018 IPR000160 GGDEF domain vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 Pfam PF00563 EAL domain 346 580 1.2E-69 T 12-10-2018 IPR001633 EAL domain vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 325 3.2E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 328 5.8E-27 T 12-10-2018 IPR000160 GGDEF domain vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 SUPERFAMILY SSF55073 174 332 1.1E-34 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 Gene3D G3DSA:3.20.20.450 344 597 1.6E-95 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 SUPERFAMILY SSF141868 345 593 1.06E-87 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 SMART SM00052 340 585 1.7E-97 T 12-10-2018 IPR001633 EAL domain vfu_B01305 50fb52b1dd34dfb14e97a3e7b085f4d9 604 Gene3D G3DSA:3.30.70.270 164 343 3.1E-42 T 12-10-2018 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 19 74 5.6E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 Gene3D G3DSA:1.10.287.1040 13 86 4.1E-23 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 PIRSF PIRSF006488 7 87 3.8E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 SUPERFAMILY SSF116842 11 82 2.35E-21 T 12-10-2018 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 19 79 15.64 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 59 2.0E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 vfu_A02694 117ca9b14146e9183b6cdf880d2e0080 89 Pfam PF02609 Exonuclease VII small subunit 20 70 1.1E-19 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 Gene3D G3DSA:3.40.50.2300 84 317 6.3E-51 T 12-10-2018 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 Gene3D G3DSA:1.10.260.40 1 59 2.1E-16 T 12-10-2018 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 SUPERFAMILY SSF53822 118 332 5.3E-33 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 SMART SM00354 3 73 9.8E-11 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 Gene3D G3DSA:3.40.50.2300 168 297 6.3E-51 T 12-10-2018 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.7E-12 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 SUPERFAMILY SSF47413 2 59 1.31E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00535 ac2423d96e4f690641b9f2b644926aca 334 Pfam PF13377 Periplasmic binding protein-like domain 177 334 2.0E-12 T 12-10-2018 vfu_A01254 a15a278aa8728d119b4383488d4df53a 126 Gene3D G3DSA:3.40.50.2300 1 126 3.7E-41 T 12-10-2018 vfu_A01254 a15a278aa8728d119b4383488d4df53a 126 SMART SM00448 5 119 4.0E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01254 a15a278aa8728d119b4383488d4df53a 126 Pfam PF00072 Response regulator receiver domain 7 119 1.5E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01254 a15a278aa8728d119b4383488d4df53a 126 SUPERFAMILY SSF52172 3 125 3.7E-38 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 334 2.7E-131 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 SUPERFAMILY SSF53671 4 335 5.63E-99 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 Gene3D G3DSA:3.40.50.1370 151 321 1.2E-141 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 332 1.5E-55 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.2E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 335 82.625 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.0E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.0E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.0E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.0E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 4.0E-32 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 Gene3D G3DSA:3.40.50.1370 5 331 1.2E-141 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 3.4E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 3.4E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 3.4E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00561 3d1429e9435f5489303771f61ec3ffdc 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 3.4E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:1.10.150.20 712 855 4.9E-114 T 12-10-2018 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SMART SM00482 689 896 5.3E-119 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF88723 7 170 2.21E-56 T 12-10-2018 IPR029060 PIN-like domain superfamily vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 696 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 879 892 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 757 782 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 816 827 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 680 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 733 746 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 726 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 805 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 PRINTS PR00868 DNA-polymerase family A (pol I) signature 848 864 1.5E-78 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 TIGRFAM TIGR00593 pola: DNA polymerase I 9 932 1.3E-285 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SMART SM00474 333 520 5.2E-43 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:1.20.1060.10 546 661 4.2E-41 T 12-10-2018 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Pfam PF01612 3'-5' exonuclease 333 520 1.0E-40 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.0E-54 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF53098 336 521 2.72E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.30.420.10 330 545 2.5E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Pfam PF00476 DNA polymerase family A 556 930 6.1E-157 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:1.10.150.20 174 253 5.1E-94 T 12-10-2018 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF56672 525 932 4.23E-159 T 12-10-2018 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SMART SM00475 7 268 1.8E-121 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SMART SM00279 173 208 1.2E-13 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.30.70.370 667 928 4.9E-114 T 12-10-2018 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 9.6E-28 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 Gene3D G3DSA:3.40.50.1010 9 284 5.1E-94 T 12-10-2018 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 ProSitePatterns PS00447 DNA polymerase family A signature. 757 776 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00423 1e3f62e2febabba525051c327bf9a873 932 SUPERFAMILY SSF47807 171 291 2.24E-29 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 474 618 5.4E-38 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 SUPERFAMILY SSF54631 154 272 2.65E-25 T 12-10-2018 vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF00571 CBS domain 223 273 9.0E-6 T 12-10-2018 IPR000644 CBS domain vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF00571 CBS domain 155 208 4.1E-8 T 12-10-2018 IPR000644 CBS domain vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 Gene3D G3DSA:2.60.120.10 2 133 1.3E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 SMART SM00116 162 211 6.4E-8 T 12-10-2018 IPR000644 CBS domain vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 SMART SM00116 228 276 2.1 T 12-10-2018 IPR000644 CBS domain vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 SUPERFAMILY SSF51206 4 134 2.23E-13 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 Pfam PF03445 Putative nucleotidyltransferase DUF294 303 435 5.8E-43 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 vfu_A01173 81a8505889a9e7ae09d3a6e4e6376376 620 Gene3D G3DSA:3.10.580.10 147 303 2.7E-27 T 12-10-2018 vfu_A02963 e22910abb06e7c7ffae47f966ae1fa2b 264 Pfam PF01578 Cytochrome C assembly protein 37 262 9.9E-48 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 576 605 1.2E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 547 574 1.2E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 674 4.9E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 SMART SM00283 445 702 7.9E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 SUPERFAMILY SSF58104 406 699 1.4E-52 T 12-10-2018 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 SMART SM00304 381 437 2.6E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01291 11c5dc9bb6ff3c21ce465615b46ad346 707 Gene3D G3DSA:1.10.287.950 381 704 6.9E-56 T 12-10-2018 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 1.9E-92 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 SUPERFAMILY SSF54675 15 128 1.84E-32 T 12-10-2018 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 Gene3D G3DSA:3.20.20.70 138 284 9.7E-125 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 SUPERFAMILY SSF51690 130 294 4.32E-60 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 PIRSF PIRSF006250 16 295 1.3E-99 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 5.2E-57 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 Gene3D G3DSA:3.90.1170.20 21 293 9.7E-125 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 vfu_A00873 ce95500657616d28802c413f7d1ba22a 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 4.6E-26 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 vfu_A02983 efb41fb67ea60f41af27fd1a1605ae51 311 Gene3D G3DSA:2.70.70.10 175 310 4.0E-37 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A02983 efb41fb67ea60f41af27fd1a1605ae51 311 SUPERFAMILY SSF51261 48 310 2.3E-50 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A02983 efb41fb67ea60f41af27fd1a1605ae51 311 Gene3D G3DSA:3.10.350.10 48 90 7.8E-12 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A02983 efb41fb67ea60f41af27fd1a1605ae51 311 SMART SM00257 48 92 2.5E-11 T 12-10-2018 IPR018392 LysM domain vfu_A02983 efb41fb67ea60f41af27fd1a1605ae51 311 Pfam PF01476 LysM domain 49 91 1.3E-11 T 12-10-2018 IPR018392 LysM domain vfu_A02983 efb41fb67ea60f41af27fd1a1605ae51 311 Pfam PF01551 Peptidase family M23 212 306 2.0E-31 T 12-10-2018 IPR016047 Peptidase M23 vfu_B00810 86f5636920d0fe88949154fff615df53 786 Gene3D G3DSA:3.40.50.300 6 179 1.6E-26 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 Gene3D G3DSA:3.40.50.300 245 449 1.2E-55 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 2.1E-7 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 2.1E-7 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 2.1E-7 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 SUPERFAMILY SSF52540 30 537 2.13E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00810 86f5636920d0fe88949154fff615df53 786 Gene3D G3DSA:3.30.230.10 541 768 9.6E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_B00810 86f5636920d0fe88949154fff615df53 786 Pfam PF13654 AAA domain 25 539 3.7E-185 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 7.7E-10 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 vfu_B00810 86f5636920d0fe88949154fff615df53 786 Gene3D G3DSA:1.10.8.60 450 537 1.3E-13 T 12-10-2018 vfu_B00810 86f5636920d0fe88949154fff615df53 786 SUPERFAMILY SSF54211 565 756 2.05E-35 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 PIRSF PIRSF005457 1 252 8.1E-97 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 SUPERFAMILY SSF56281 3 252 3.28E-70 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 5.1E-20 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 44.974 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 3.9E-103 T 12-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 SMART SM00849 12 166 6.8E-35 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 Gene3D G3DSA:3.60.15.10 1 252 3.8E-92 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A01091 422897b88f7befbe9e883261c7c9efbc 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 9.0E-25 T 12-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 SMART SM01210 330 423 1.3E-55 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 SUPERFAMILY SSF51246 329 424 1.78E-33 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.30.1490.20 121 190 6.3E-29 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 SMART SM01209 103 296 1.7E-142 T 12-10-2018 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 SUPERFAMILY SSF56059 104 323 1.29E-68 T 12-10-2018 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 4.6E-186 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 44.243 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.90.600.10 330 430 1.7E-34 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.2E-29 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.40.50.20 2 95 2.4E-37 T 12-10-2018 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 5.2E-35 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 SUPERFAMILY SSF52440 1 103 1.32E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.9E-82 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A00083 91930329d2b44ea91e37a973708b4bdb 430 Gene3D G3DSA:3.30.470.20 191 329 1.1E-61 T 12-10-2018 vfu_A01040 a9b63dde47b9a13be1ffe80d372c5b84 453 Pfam PF00209 Sodium:neurotransmitter symporter family 9 136 2.1E-21 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01040 a9b63dde47b9a13be1ffe80d372c5b84 453 Pfam PF00209 Sodium:neurotransmitter symporter family 153 451 1.2E-25 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01040 a9b63dde47b9a13be1ffe80d372c5b84 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 3.0E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01040 a9b63dde47b9a13be1ffe80d372c5b84 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 3.0E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01040 a9b63dde47b9a13be1ffe80d372c5b84 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 3.0E-10 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01040 a9b63dde47b9a13be1ffe80d372c5b84 453 SUPERFAMILY SSF161070 9 452 6.02E-118 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 SUPERFAMILY SSF55124 493 632 2.45E-26 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 670 686 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Gene3D G3DSA:1.10.10.1100 401 468 6.6E-13 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 623 759 2.5E-19 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.1E-9 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 5.1E-9 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 5.1E-9 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 5.1E-9 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 SUPERFAMILY SSF51905 148 307 5.92E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PIRSF PIRSF037149 1 826 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Gene3D G3DSA:3.50.50.60 109 244 4.4E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 SUPERFAMILY SSF51905 2 190 2.59E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.2E-17 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.2E-17 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.2E-17 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.2E-17 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.2E-17 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 5 791 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 551 612 5.4E-12 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Gene3D G3DSA:3.50.50.60 6 281 4.4E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 287 3.7E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Gene3D G3DSA:3.30.413.10 622 788 1.9E-35 T 12-10-2018 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 Pfam PF04324 BFD-like [2Fe-2S] binding domain 414 462 1.4E-14 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00397 Sirohaem Fe-binding site signature 670 688 8.5E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 PRINTS PR00397 Sirohaem Fe-binding site signature 627 645 8.5E-7 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01564 648cfb22d26d1e8fcf4580701ac9374e 829 SUPERFAMILY SSF56014 624 795 1.15E-50 T 12-10-2018 vfu_B01183 d13cb4ce2a74593a0f0e5672e8e2c90e 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 443 7.0E-155 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 vfu_B01183 d13cb4ce2a74593a0f0e5672e8e2c90e 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 442 6.8E-158 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 vfu_A00529 adcbebd8282deadb6e12b8af290c5637 233 SUPERFAMILY SSF158832 3 218 8.89E-87 T 12-10-2018 vfu_A00529 adcbebd8282deadb6e12b8af290c5637 233 Gene3D G3DSA:1.10.3500.10 110 222 7.6E-34 T 12-10-2018 IPR023323 Tex-like domain superfamily vfu_A00529 adcbebd8282deadb6e12b8af290c5637 233 Gene3D G3DSA:1.10.10.650 2 109 1.0E-41 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily vfu_A00529 adcbebd8282deadb6e12b8af290c5637 233 Pfam PF09371 Tex-like protein N-terminal domain 9 193 3.5E-71 T 12-10-2018 IPR018974 Tex-like protein, N-terminal vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:3.40.50.2300 763 909 3.9E-23 T 12-10-2018 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Pfam PF00989 PAS fold 385 507 1.4E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SUPERFAMILY SSF47384 518 599 4.51E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Pfam PF00072 Response regulator receiver domain 928 1038 4.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Pfam PF00072 Response regulator receiver domain 779 894 3.0E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:3.30.565.10 596 762 1.1E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SUPERFAMILY SSF47226 1074 1176 7.72E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:3.40.50.2300 924 1064 3.1E-41 T 12-10-2018 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SUPERFAMILY SSF52172 925 1054 7.68E-40 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SUPERFAMILY SSF55874 586 756 1.31E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:3.30.450.20 381 510 9.5E-23 T 12-10-2018 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Pfam PF00512 His Kinase A (phospho-acceptor) domain 532 597 3.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 3.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 3.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 757 3.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 738 3.5E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SUPERFAMILY SSF52172 775 912 2.13E-23 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Pfam PF03924 CHASE domain 85 269 5.3E-40 T 12-10-2018 IPR006189 CHASE domain vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:3.30.450.350 87 290 1.2E-20 T 12-10-2018 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SMART SM00387 644 760 8.7E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SUPERFAMILY SSF55785 394 521 1.12E-15 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SMART SM00091 382 449 4.6E-8 T 12-10-2018 IPR000014 PAS domain vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SMART SM00448 777 898 2.4E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SMART SM00448 925 1038 5.1E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:1.20.120.160 1070 1179 2.2E-7 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SMART SM01079 82 272 2.4E-48 T 12-10-2018 IPR006189 CHASE domain vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Gene3D G3DSA:1.10.287.130 511 595 7.9E-29 T 12-10-2018 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 383 519 2.0E-12 T 12-10-2018 IPR000014 PAS domain vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 SMART SM00388 532 597 6.5E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00704 1ab9a99356509ccd54f984cdaad2e298 1268 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 644 758 5.0E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00200 b0616c91dc3fc5c9cdb577706b94714d 92 Pfam PF10115 Transcriptional activator HlyU 2 91 2.6E-41 T 12-10-2018 IPR018772 Transcription activator HlyU vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 91 366 4.0E-21 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 Gene3D G3DSA:3.40.50.1100 101 399 4.2E-136 T 12-10-2018 vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 TIGRFAM TIGR00260 thrC: threonine synthase 51 391 6.7E-113 T 12-10-2018 IPR004450 Threonine synthase-like vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 Pfam PF14821 Threonine synthase N terminus 8 78 7.2E-9 T 12-10-2018 IPR029144 Threonine synthase, N-terminal vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 Gene3D G3DSA:3.40.50.1100 83 392 4.2E-136 T 12-10-2018 vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 SUPERFAMILY SSF53686 1 425 1.44E-129 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_A02895 29dd19a779ab7829f2c7a0aac1504e61 427 Gene3D G3DSA:3.90.1380.10 1 79 3.3E-32 T 12-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 Gene3D G3DSA:2.30.170.50 1 71 1.8E-33 T 12-10-2018 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 Pfam PF01197 Ribosomal protein L31 1 66 3.0E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 2.5E-35 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.9E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 1.9E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 1.9E-23 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 SUPERFAMILY SSF143800 1 68 7.85E-28 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00585 30d405123819eac3fb2738fe96c5a61f 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.135 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 476 2.6E-22 T 12-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 Pfam PF01464 Transglycosylase SLT domain 489 599 7.7E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 Gene3D G3DSA:1.10.530.10 478 648 3.5E-50 T 12-10-2018 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 Gene3D G3DSA:1.10.1240.20 409 476 1.1E-19 T 12-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 Gene3D G3DSA:1.25.20.10 33 393 7.2E-103 T 12-10-2018 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 SUPERFAMILY SSF48435 33 481 1.83E-121 T 12-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 vfu_A00998 81d5417e20ca627b3f87c1a20f6691ad 648 SUPERFAMILY SSF53955 483 642 8.63E-48 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 Gene3D G3DSA:2.40.280.10 7 136 4.8E-45 T 12-10-2018 IPR023620 Small protein B vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.4E-53 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 4.0E-57 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 SUPERFAMILY SSF74982 9 139 6.54E-49 T 12-10-2018 IPR023620 Small protein B vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 Pfam PF01668 SmpB protein 15 157 7.4E-57 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 vfu_A02736 0f2fd21973a84fca6c0234d807ab32e6 162 Hamap MF_00023 SsrA-binding protein [smpB]. 1 162 70.405 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SUPERFAMILY SSF57783 756 812 3.06E-21 T 12-10-2018 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 546 570 1.2E-4 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 655 692 3.8E-9 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:3.40.50.140 1 112 1.4E-42 T 12-10-2018 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SUPERFAMILY SSF56712 11 557 7.59E-183 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:1.10.290.10 229 353 6.7E-163 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Pfam PF01131 DNA topoisomerase 106 513 2.6E-128 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 263 272 1.8E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 438 452 1.8E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 339 355 1.8E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 55 68 1.8E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 140 158 1.8E-35 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Pfam PF01751 Toprim domain 27 91 3.6E-18 T 12-10-2018 IPR006171 TOPRIM domain vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Hamap MF_00952 DNA topoisomerase 1 [topA]. 8 679 50.729 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:2.70.20.10 162 421 6.7E-163 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:1.10.460.10 114 519 6.7E-163 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 12 582 2.6E-230 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Pfam PF08272 Topoisomerase I zinc-ribbon-like 771 810 2.3E-18 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Pfam PF08272 Topoisomerase I zinc-ribbon-like 704 740 5.3E-11 T 12-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 258 272 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:3.30.65.10 645 691 2.3E-6 T 12-10-2018 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:3.30.65.10 692 754 2.9E-32 T 12-10-2018 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SMART SM00493 3 81 8.3E-7 T 12-10-2018 IPR006171 TOPRIM domain vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SUPERFAMILY SSF57783 647 689 2.21E-5 T 12-10-2018 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SMART SM00437 221 475 1.5E-121 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SUPERFAMILY SSF57783 691 754 5.61E-20 T 12-10-2018 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 SMART SM00436 82 170 1.9E-48 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 vfu_A01613 3bb83923d5bfde9436f4f0b3cdca7514 817 Gene3D G3DSA:2.20.25.10 755 813 3.2E-27 T 12-10-2018 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.6E-29 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 Pfam PF01938 TRAM domain 379 440 2.8E-16 T 12-10-2018 IPR002792 TRAM domain vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 SMART SM00729 147 367 1.6E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 7.9E-150 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 Gene3D G3DSA:3.40.50.12160 3 138 5.4E-34 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 SUPERFAMILY SSF102114 123 374 7.72E-61 T 12-10-2018 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.396 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 Gene3D G3DSA:3.80.30.20 145 377 5.0E-82 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 Pfam PF04055 Radical SAM superfamily 151 325 2.1E-26 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.3E-198 T 12-10-2018 vfu_A02640 2763dc14b0d9370988d35bb886b31741 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 SMART SM00354 1 70 2.5E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.5E-11 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 SUPERFAMILY SSF47413 2 57 3.84E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 SUPERFAMILY SSF53822 56 328 2.51E-29 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 Gene3D G3DSA:3.40.50.2300 166 327 1.7E-32 T 12-10-2018 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 Gene3D G3DSA:1.10.260.40 1 58 5.7E-18 T 12-10-2018 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 Gene3D G3DSA:3.40.50.2300 77 326 1.7E-32 T 12-10-2018 vfu_B00919 eaa32980fbf793999efdbe1aa323b13f 330 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 75 264 4.7E-15 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 198 215 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 SUPERFAMILY SSF53697 1 249 9.21E-105 T 12-10-2018 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 Gene3D G3DSA:3.40.50.10490 1 211 8.8E-110 T 12-10-2018 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 PRINTS PR00662 Glucose-6-phosphate isomerase signature 39 60 1.4E-31 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 PRINTS PR00662 Glucose-6-phosphate isomerase signature 184 198 1.4E-31 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 PRINTS PR00662 Glucose-6-phosphate isomerase signature 166 184 1.4E-31 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 211 1.4E-31 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 Gene3D G3DSA:1.10.1390.10 212 249 1.4E-19 T 12-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03142 08a6747e9cbc42326efa51bd17e35567 251 Pfam PF00342 Phosphoglucose isomerase 1 242 2.9E-122 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 SUPERFAMILY SSF52540 141 385 4.8E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Pfam PF00072 Response regulator receiver domain 6 115 2.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 6.0E-16 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 SMART SM00382 162 324 6.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:3.40.50.2300 1 124 8.1E-40 T 12-10-2018 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:3.40.50.300 127 312 1.3E-67 T 12-10-2018 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:1.10.8.60 313 380 1.0E-17 T 12-10-2018 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 SMART SM00448 4 115 2.0E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Pfam PF00158 Sigma-54 interaction domain 142 309 1.3E-71 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 4.4E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 4.4E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 Gene3D G3DSA:1.10.10.60 381 467 1.1E-25 T 12-10-2018 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 3.3E-243 T 12-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 SUPERFAMILY SSF46689 382 466 4.3E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00494 0d36a8f8ed1deb5db309c2a254591a70 467 SUPERFAMILY SSF52172 2 187 1.31E-42 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01249 adf8df55450826eca4d7cd0beddb2b8d 150 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 150 6.3E-33 T 12-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 vfu_A01249 adf8df55450826eca4d7cd0beddb2b8d 150 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 73 1.6E-6 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 vfu_A01249 adf8df55450826eca4d7cd0beddb2b8d 150 Gene3D G3DSA:3.40.50.1240 1 150 1.1E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily vfu_A01249 adf8df55450826eca4d7cd0beddb2b8d 150 SUPERFAMILY SSF53254 1 139 1.2E-17 T 12-10-2018 IPR029033 Histidine phosphatase superfamily vfu_A01826 56d47c0fdae06f143bfa83277422a816 513 SMART SM00052 250 492 8.9E-74 T 12-10-2018 IPR001633 EAL domain vfu_A01826 56d47c0fdae06f143bfa83277422a816 513 Gene3D G3DSA:3.20.20.450 250 499 3.1E-71 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01826 56d47c0fdae06f143bfa83277422a816 513 Pfam PF12792 CSS motif domain associated with EAL 47 162 3.6E-7 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain vfu_A01826 56d47c0fdae06f143bfa83277422a816 513 Pfam PF00563 EAL domain 257 487 1.6E-58 T 12-10-2018 IPR001633 EAL domain vfu_A01826 56d47c0fdae06f143bfa83277422a816 513 SUPERFAMILY SSF141868 256 494 8.11E-68 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Gene3D G3DSA:3.30.70.3400 219 439 8.8E-50 T 12-10-2018 vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 596 1.8E-80 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Pfam PF07549 SecD/SecF GG Motif 115 141 3.6E-7 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 SUPERFAMILY SSF82866 412 608 7.98E-46 T 12-10-2018 vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 617 48.264 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Pfam PF13721 SecD export protein N-terminal TM region 2 103 3.5E-37 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Pfam PF02355 Protein export membrane protein 435 596 2.3E-19 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 5.9E-149 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Gene3D G3DSA:1.20.1640.10 450 602 1.4E-7 T 12-10-2018 vfu_A02793 b45df36f312d4f7490ab653375d8b5a1 617 Gene3D G3DSA:3.30.1360.200 280 433 8.8E-50 T 12-10-2018 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 9.2E-19 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 2.0E-202 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 5.1E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.1E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 5.1E-13 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 6.6E-46 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 442 3.0E-12 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF53738 4 182 1.84E-49 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.40.120.10 175 363 5.0E-63 T 12-10-2018 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF55957 358 443 1.28E-21 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.30.310.50 371 446 3.5E-24 T 12-10-2018 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.40.120.10 4 155 7.9E-49 T 12-10-2018 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF53738 259 366 2.12E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Gene3D G3DSA:3.40.120.10 258 340 5.0E-63 T 12-10-2018 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 47.192 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 SUPERFAMILY SSF53738 157 257 1.18E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00936 069aa00323d499dd76e14bd7062f10f9 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.1E-31 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 616 980 2.1E-98 T 12-10-2018 IPR010080 Thioester reductase-like domain vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Pfam PF07993 Male sterility protein 619 861 6.5E-53 T 12-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:1.10.1200.10 494 579 2.8E-21 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01824 fec5b38396f4544617990da498f13dc4 998 ProSitePatterns PS00012 Phosphopantetheine attachment site. 530 545 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site vfu_A01824 fec5b38396f4544617990da498f13dc4 998 SUPERFAMILY SSF47336 503 572 3.53E-16 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01824 fec5b38396f4544617990da498f13dc4 998 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 29 423 1.9E-114 T 12-10-2018 IPR010071 Amino acid adenylation domain vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Pfam PF00550 Phosphopantetheine attachment site 508 570 2.1E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01824 fec5b38396f4544617990da498f13dc4 998 SUPERFAMILY SSF51735 615 913 2.18E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01824 fec5b38396f4544617990da498f13dc4 998 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A01824 fec5b38396f4544617990da498f13dc4 998 SUPERFAMILY SSF56801 8 519 2.22E-135 T 12-10-2018 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.40.50.12780 3 392 7.1E-116 T 12-10-2018 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.40.50.720 590 984 8.8E-79 T 12-10-2018 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Pfam PF13193 AMP-binding enzyme C-terminal domain 407 480 2.6E-8 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A01824 fec5b38396f4544617990da498f13dc4 998 SMART SM00823 Phosphopantetheine attachment site 506 575 8.2E-10 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Gene3D G3DSA:3.30.300.30 393 493 1.7E-25 T 12-10-2018 vfu_A01824 fec5b38396f4544617990da498f13dc4 998 Pfam PF00501 AMP-binding enzyme 8 399 2.3E-90 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 SUPERFAMILY SSF55781 19 161 3.05E-20 T 12-10-2018 vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 Pfam PF00563 EAL domain 377 609 1.0E-58 T 12-10-2018 IPR001633 EAL domain vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 Gene3D G3DSA:3.20.20.450 371 623 2.5E-72 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 SUPERFAMILY SSF55073 209 355 2.28E-12 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 SMART SM00267 192 359 1.1E-4 T 12-10-2018 IPR000160 GGDEF domain vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 Gene3D G3DSA:3.30.70.270 189 358 5.9E-13 T 12-10-2018 vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 353 2.9E-12 T 12-10-2018 IPR000160 GGDEF domain vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 SUPERFAMILY SSF141868 374 621 2.88E-65 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 Gene3D G3DSA:3.30.450.40 7 160 9.9E-14 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 Pfam PF13185 GAF domain 20 142 7.6E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 SMART SM00065 14 161 1.3E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_B01380 a5a012015a00f8f3acf48cc7194d42fe 638 SMART SM00052 369 614 3.1E-68 T 12-10-2018 IPR001633 EAL domain vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 Gene3D G3DSA:3.90.1150.10 6 405 2.1E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 SUPERFAMILY SSF53383 8 410 6.59E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 Pfam PF00202 Aminotransferase class-III 16 409 2.8E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 266 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 Gene3D G3DSA:3.40.640.10 54 313 2.1E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 2 410 5.2E-198 T 12-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 PIRSF PIRSF000521 171 412 8.5E-33 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 PIRSF PIRSF000521 101 153 0.38 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 PIRSF PIRSF000521 2 128 8.2E-4 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00642 be8ac6fad5e1b93572dc9eb93cebd7bf 421 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 2 412 3.0E-149 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 vfu_B00117 9fbbd7899f3b00fd1c240ec2350e7e5a 335 SUPERFAMILY SSF53850 23 325 2.47E-62 T 12-10-2018 vfu_B00117 9fbbd7899f3b00fd1c240ec2350e7e5a 335 Gene3D G3DSA:3.40.190.10 29 296 2.0E-77 T 12-10-2018 vfu_B00117 9fbbd7899f3b00fd1c240ec2350e7e5a 335 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 6 332 1.2E-153 T 12-10-2018 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative vfu_B00117 9fbbd7899f3b00fd1c240ec2350e7e5a 335 PIRSF PIRSF002825 3 328 7.2E-76 T 12-10-2018 IPR026045 Ferric binding protein vfu_B00117 9fbbd7899f3b00fd1c240ec2350e7e5a 335 Gene3D G3DSA:3.40.190.10 132 310 2.0E-77 T 12-10-2018 vfu_B00117 9fbbd7899f3b00fd1c240ec2350e7e5a 335 Pfam PF13343 Bacterial extracellular solute-binding protein 74 293 5.4E-24 T 12-10-2018 vfu_A02971 daa0fbbb03d65bfb5987cd59f7e1d16d 376 PIRSF PIRSF015658 1 376 4.2E-179 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 vfu_A02971 daa0fbbb03d65bfb5987cd59f7e1d16d 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 2.0E-159 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 vfu_A02971 daa0fbbb03d65bfb5987cd59f7e1d16d 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 1.1E-171 T 12-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 132 140 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 Pfam PF01238 Phosphomannose isomerase type I 9 362 2.0E-82 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 39 54 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 245 264 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 229 244 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 264 283 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 11 29 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 283 302 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 87 108 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PRINTS PR00714 Phosphomannose isomerase type I signature 132 155 1.4E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 PIRSF PIRSF001480 6 398 1.6E-100 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:2.60.120.10 13 284 2.3E-130 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 SUPERFAMILY SSF51182 6 389 2.08E-102 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 8 389 1.0E-88 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:2.60.120.10 310 391 2.3E-130 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 264 289 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A00078 d5ba4ac2c96558c4c95b3404ae73c54c 398 Gene3D G3DSA:1.10.441.10 156 309 2.3E-130 T 12-10-2018 vfu_A01272 0ff1788538d3b38719e00e6e606bbcd5 222 Pfam PF00106 short chain dehydrogenase 8 185 9.1E-18 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01272 0ff1788538d3b38719e00e6e606bbcd5 222 Gene3D G3DSA:3.40.50.720 1 220 2.9E-25 T 12-10-2018 vfu_A01272 0ff1788538d3b38719e00e6e606bbcd5 222 SUPERFAMILY SSF51735 3 204 7.46E-26 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 Pfam PF02378 Phosphotransferase system, EIIC 298 525 1.4E-8 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 Gene3D G3DSA:3.40.930.10 1 158 4.6E-37 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 SUPERFAMILY SSF52794 169 265 5.41E-32 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 288 626 5.9E-81 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 Gene3D G3DSA:3.40.50.2300 163 271 8.8E-37 T 12-10-2018 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 171 262 4.3E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 170 254 1.8E-25 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 SUPERFAMILY SSF55804 1 150 2.09E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 150 1.5E-36 T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_B01212 bc2e87181b307ce434dd0a3f2a5ec989 645 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 7.6E-37 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:3.30.870.10 500 686 1.7E-73 T 12-10-2018 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:3.30.1840.10 110 307 4.4E-76 T 12-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 6.8E-264 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF56024 315 492 3.77E-53 T 12-10-2018 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Pfam PF02503 Polyphosphate kinase middle domain 119 320 9.8E-47 T 12-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:1.20.58.310 9 109 3.0E-35 T 12-10-2018 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 5.4E-30 T 12-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 27.387 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF140356 4 104 9.55E-32 T 12-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 1.1E-145 T 12-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 Gene3D G3DSA:3.30.870.10 319 499 3.5E-72 T 12-10-2018 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF56024 500 684 5.02E-69 T 12-10-2018 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 SUPERFAMILY SSF143724 107 312 5.3E-64 T 12-10-2018 vfu_A02809 ce460f5cfd4552ebea3333fbaac776c7 704 PIRSF PIRSF015589 1 697 4.6E-251 T 12-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 vfu_A00971 5e7cdf31dacd2677daaf2862c920ed92 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 1.3E-48 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 SMART SM00283 358 626 3.1E-64 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 Pfam PF02743 Cache domain 42 258 5.1E-30 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 8.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 8.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 8.3E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 Pfam PF00672 HAMP domain 300 346 1.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 Gene3D G3DSA:3.30.450.20 60 168 9.7E-58 T 12-10-2018 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 SUPERFAMILY SSF103190 89 175 2.15E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 Gene3D G3DSA:1.10.287.950 296 627 9.1E-73 T 12-10-2018 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 Gene3D G3DSA:3.30.450.20 47 269 9.7E-58 T 12-10-2018 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 SMART SM00304 353 403 15.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 SMART SM00304 296 350 3.5E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 SUPERFAMILY SSF58104 318 627 2.09E-76 T 12-10-2018 vfu_A01762 6d87c89df0fb7b3a6e9872a7c8fee938 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 593 8.2E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SMART SM00487 572 761 9.0E-34 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SUPERFAMILY SSF52540 495 755 6.17E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:3.30.2060.10 102 187 9.0E-120 T 12-10-2018 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Pfam PF00270 DEAD/DEAH box helicase 577 737 9.3E-21 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SMART SM00490 798 882 1.5E-18 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:3.40.50.300 514 753 2.2E-237 T 12-10-2018 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Pfam PF00271 Helicase conserved C-terminal domain 779 881 4.8E-16 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Pfam PF02559 CarD-like/TRCF domain 452 547 6.2E-26 T 12-10-2018 IPR003711 CarD-like/TRCF domain vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SMART SM00982 980 1080 3.4E-47 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SUPERFAMILY SSF143517 967 1119 5.23E-44 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:2.30.30.840 455 513 2.2E-237 T 12-10-2018 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:3.40.50.11180 2 305 9.0E-120 T 12-10-2018 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 2 1084 28.105 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Pfam PF03461 TRCF domain 981 1072 4.4E-28 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 120 1054 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SMART SM01058 451 548 1.2E-51 T 12-10-2018 IPR003711 CarD-like/TRCF domain vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SUPERFAMILY SSF52540 323 438 1.22E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:3.40.50.11140 327 425 7.5E-36 T 12-10-2018 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:3.40.50.300 450 962 2.2E-237 T 12-10-2018 vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SUPERFAMILY SSF52540 2 317 8.85E-99 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SUPERFAMILY SSF52540 754 962 9.8E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 SUPERFAMILY SSF141259 442 520 3.14E-25 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily vfu_A02395 279200a9b06a702d41a46b6ee7b40d7d 1125 Gene3D G3DSA:3.90.1150.50 976 1122 1.5E-45 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 Gene3D G3DSA:1.10.287.990 20 82 3.2E-25 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 PIRSF PIRSF000349 1 194 2.1E-84 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.7E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 7.4E-38 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 Gene3D G3DSA:2.40.500.20 83 194 5.0E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 SUPERFAMILY SSF54719 84 193 4.32E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A01274 a4828d40ea19f040417f74b30c8c2ae5 194 SUPERFAMILY SSF46609 1 84 4.06E-35 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00094 fc1c83a937e99c10908c1b5af6e3fd26 528 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 374 402 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 vfu_A00094 fc1c83a937e99c10908c1b5af6e3fd26 528 SUPERFAMILY SSF53955 346 523 1.28E-33 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A00094 fc1c83a937e99c10908c1b5af6e3fd26 528 Gene3D G3DSA:1.10.530.10 339 521 5.9E-51 T 12-10-2018 vfu_A00094 fc1c83a937e99c10908c1b5af6e3fd26 528 Pfam PF01464 Transglycosylase SLT domain 358 482 1.7E-27 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A00061 675072d08eec0377e87645540c34af00 497 Pfam PF02541 Ppx/GppA phosphatase family 23 302 2.9E-87 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 vfu_A00061 675072d08eec0377e87645540c34af00 497 Gene3D G3DSA:3.30.420.150 114 291 9.1E-82 T 12-10-2018 vfu_A00061 675072d08eec0377e87645540c34af00 497 SUPERFAMILY SSF53067 134 304 4.75E-42 T 12-10-2018 vfu_A00061 675072d08eec0377e87645540c34af00 497 Gene3D G3DSA:3.30.420.40 11 299 9.1E-82 T 12-10-2018 vfu_A00061 675072d08eec0377e87645540c34af00 497 PIRSF PIRSF001267 1 497 9.3E-179 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 vfu_A00061 675072d08eec0377e87645540c34af00 497 SUPERFAMILY SSF53067 9 129 1.42E-35 T 12-10-2018 vfu_A00061 675072d08eec0377e87645540c34af00 497 Gene3D G3DSA:1.10.3210.10 306 497 3.4E-46 T 12-10-2018 vfu_A00061 675072d08eec0377e87645540c34af00 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 495 52.824 T 12-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 vfu_A00061 675072d08eec0377e87645540c34af00 497 SUPERFAMILY SSF109604 309 495 3.14E-38 T 12-10-2018 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Gene3D G3DSA:3.30.60.70 131 171 1.9E-20 T 12-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Gene3D G3DSA:2.160.10.10 172 343 1.1E-70 T 12-10-2018 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 9.6E-16 T 12-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 46.219 T 12-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Gene3D G3DSA:3.30.70.2010 1 130 8.5E-39 T 12-10-2018 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 4.8E-178 T 12-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 SUPERFAMILY SSF51161 90 323 1.94E-35 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A02839 e41e53d588ad19aa9b0ba7a01c3b0d7d 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.8E-13 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00159 93c256eebb4f9bfddd0f38d9da2bf864 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 1.9E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00159 93c256eebb4f9bfddd0f38d9da2bf864 196 Gene3D G3DSA:1.10.357.10 3 196 3.0E-79 T 12-10-2018 vfu_A00159 93c256eebb4f9bfddd0f38d9da2bf864 196 SUPERFAMILY SSF48498 81 191 3.71E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A00159 93c256eebb4f9bfddd0f38d9da2bf864 196 SUPERFAMILY SSF46689 6 78 2.67E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00159 93c256eebb4f9bfddd0f38d9da2bf864 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.808 T 12-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 SMART SM00475 3 254 1.1E-58 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 254 4.0E-22 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 SUPERFAMILY SSF47807 164 254 4.78E-20 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 SMART SM00279 167 202 8.2E-10 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 155 1.8E-30 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 Gene3D G3DSA:3.40.50.1010 1 166 6.2E-51 T 12-10-2018 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 Gene3D G3DSA:1.10.150.20 167 255 6.0E-21 T 12-10-2018 vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 SUPERFAMILY SSF88723 4 164 7.06E-37 T 12-10-2018 IPR029060 PIN-like domain superfamily vfu_A02685 a9a53685f173c9b731813bf756ac2f56 258 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.734 T 12-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:3.40.50.2300 520 647 5.3E-28 T 12-10-2018 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SMART SM00387 394 510 9.8E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SMART SM00448 526 637 9.2E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF55785 140 267 1.57E-22 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF47384 270 347 1.55E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Pfam PF00072 Response regulator receiver domain 528 637 2.3E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:3.30.450.20 143 272 6.6E-23 T 12-10-2018 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Pfam PF01627 Hpt domain 691 763 1.7E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 6.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.3E-16 T 12-10-2018 IPR000014 PAS domain vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 506 2.4E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Pfam PF00989 PAS fold 157 266 6.4E-15 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:3.30.565.10 349 512 4.3E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 PIRSF PIRSF003182 1 781 0.0 T 12-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:1.10.287.130 273 348 5.4E-20 T 12-10-2018 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF52172 525 643 4.13E-26 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SMART SM00073 680 777 2.5E-8 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF55874 336 506 1.05E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SUPERFAMILY SSF47226 669 779 1.96E-27 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:1.10.287.970 1 89 6.7E-38 T 12-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SMART SM00091 155 221 1.4E-6 T 12-10-2018 IPR000014 PAS domain vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 Gene3D G3DSA:1.20.120.160 661 781 4.0E-28 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02903 b6384ef77b3e62674f180793177e51e5 781 SMART SM00388 282 347 8.4E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 Pfam PF13624 SurA N-terminal domain 1 166 7.7E-52 T 12-10-2018 vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 Gene3D G3DSA:3.10.50.40 269 363 9.8E-33 T 12-10-2018 vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 Pfam PF13616 PPIC-type PPIASE domain 262 362 5.7E-25 T 12-10-2018 vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 SUPERFAMILY SSF109998 39 244 1.11E-39 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 Gene3D G3DSA:1.10.4030.30 241 368 9.8E-33 T 12-10-2018 vfu_A02426 dbb70acd9535d9fb3e130f02729b6eab 619 SUPERFAMILY SSF54534 225 361 2.75E-30 T 12-10-2018 vfu_A01307 f167fe856abbff1cf67249d11de16092 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 2.2E-46 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain vfu_A01307 f167fe856abbff1cf67249d11de16092 307 Gene3D G3DSA:3.30.70.250 125 197 2.5E-108 T 12-10-2018 vfu_A01307 f167fe856abbff1cf67249d11de16092 307 Pfam PF00698 Acyl transferase domain 7 291 3.2E-39 T 12-10-2018 IPR014043 Acyl transferase vfu_A01307 f167fe856abbff1cf67249d11de16092 307 SUPERFAMILY SSF52151 4 305 5.23E-81 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase vfu_A01307 f167fe856abbff1cf67249d11de16092 307 PIRSF PIRSF000446 1 307 1.1E-135 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 vfu_A01307 f167fe856abbff1cf67249d11de16092 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.5E-126 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 vfu_A01307 f167fe856abbff1cf67249d11de16092 307 Gene3D G3DSA:3.40.366.10 7 286 2.5E-108 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 vfu_A01307 f167fe856abbff1cf67249d11de16092 307 SUPERFAMILY SSF55048 128 197 2.75E-18 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding vfu_A02678 435eca724501a6d2ab7a638edebf0210 258 PIRSF PIRSF029037 1 258 6.5E-114 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 vfu_A02678 435eca724501a6d2ab7a638edebf0210 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 3.4E-112 T 12-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 vfu_B00528 82572e071ec8a6c31dc589df0a254c13 667 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 48 348 2.5E-19 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 vfu_B00528 82572e071ec8a6c31dc589df0a254c13 667 Gene3D G3DSA:2.60.120.260 494 666 1.2E-44 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily vfu_B00528 82572e071ec8a6c31dc589df0a254c13 667 Gene3D G3DSA:3.20.20.80 33 391 4.1E-120 T 12-10-2018 vfu_B00528 82572e071ec8a6c31dc589df0a254c13 667 SUPERFAMILY SSF49785 501 663 7.01E-28 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily vfu_B00528 82572e071ec8a6c31dc589df0a254c13 667 Pfam PF09212 Carbohydrate binding module 27 498 664 3.0E-33 T 12-10-2018 IPR015295 Carbohydrate binding module 27 vfu_B00528 82572e071ec8a6c31dc589df0a254c13 667 SUPERFAMILY SSF51445 37 384 2.51E-69 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 43 59 3.5E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 104 3.5E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 76 3.5E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 89 3.5E-18 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 41 115 1.2E-28 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 SUPERFAMILY SSF101801 40 115 1.83E-19 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 45 113 2.6E-19 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) vfu_A01399 7429ada8c6f31f9b956833fb0ccee45c 122 Gene3D G3DSA:2.30.330.10 30 119 3.0E-23 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A02844 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 Pfam PF01544 CorA-like Mg2+ transporter protein 29 305 1.0E-48 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 vfu_A02844 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 SUPERFAMILY SSF143865 2 231 2.22E-28 T 12-10-2018 vfu_A02844 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 Gene3D G3DSA:3.30.460.20 1 124 1.9E-40 T 12-10-2018 vfu_A02844 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 SUPERFAMILY SSF144083 244 306 9.02E-14 T 12-10-2018 vfu_A02844 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 Gene3D G3DSA:1.20.58.340 252 309 1.3E-8 T 12-10-2018 vfu_A02844 0f098a6fb82ef56cd8dcaa4c6c8b1d23 313 Gene3D G3DSA:1.20.58.340 126 249 3.1E-27 T 12-10-2018 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 SMART SM00304 396 463 54.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 SMART SM00304 307 361 2.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 SMART SM00283 376 637 8.1E-87 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 SUPERFAMILY SSF58104 329 638 1.57E-79 T 12-10-2018 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 604 3.0E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 Gene3D G3DSA:3.30.450.20 151 284 9.4E-17 T 12-10-2018 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 Pfam PF00672 HAMP domain 308 357 3.0E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 Gene3D G3DSA:1.10.287.950 306 638 6.2E-76 T 12-10-2018 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 397 426 5.0E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 474 501 5.0E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00692 f3d47c71a0f3b6f0fd3a4b1a3f9a5483 638 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 503 532 5.0E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 26.19 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 Gene3D G3DSA:1.10.287.180 1 76 9.3E-29 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 SUPERFAMILY SSF46557 3 78 1.83E-25 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 SUPERFAMILY SSF54534 80 157 5.49E-19 T 12-10-2018 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 159 2.8E-73 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 PIRSF PIRSF006092 1 159 8.3E-43 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 157 1.9E-21 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 Gene3D G3DSA:3.10.50.30 77 160 7.0E-31 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 158 50.408 T 12-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 vfu_A00531 116305df2c9d320347f7166cf194dfcb 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.1E-23 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 vfu_A00508 fafad60aa6cc992255b600395e0bc5f2 100 Gene3D G3DSA:3.10.290.10 1 79 5.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A00508 fafad60aa6cc992255b600395e0bc5f2 100 SUPERFAMILY SSF55174 1 74 8.24E-18 T 12-10-2018 vfu_A01337 a4382fd1e4edbdd29732794a2c5dea80 377 SUPERFAMILY SSF53383 3 373 2.45E-91 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01337 a4382fd1e4edbdd29732794a2c5dea80 377 Gene3D G3DSA:3.40.640.10 26 267 6.0E-142 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01337 a4382fd1e4edbdd29732794a2c5dea80 377 Gene3D G3DSA:3.90.1150.10 1 371 6.0E-142 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01337 a4382fd1e4edbdd29732794a2c5dea80 377 Pfam PF00155 Aminotransferase class I and II 34 363 7.6E-48 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 37 69 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 170 4.9E-29 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 Pfam PF04542 Sigma-70 region 2 20 82 5.6E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 Pfam PF04545 Sigma-70, region 4 122 169 1.6E-14 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 SUPERFAMILY SSF88659 110 171 6.73E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 SUPERFAMILY SSF88946 3 101 4.19E-24 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 Gene3D G3DSA:1.10.1740.10 1 79 1.4E-23 T 12-10-2018 vfu_A02820 87c0d21e95c25f05932106f6d5756d00 177 Gene3D G3DSA:1.10.10.10 110 176 7.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 Pfam PF07655 Secretin N-terminal domain 145 245 6.9E-25 T 12-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 240 523 3.6E-93 T 12-10-2018 IPR013358 Pilus biogenesis, MshL vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 Gene3D G3DSA:3.55.50.30 55 145 7.1E-10 T 12-10-2018 vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 SMART SM00965 93 141 1.0E-6 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 Pfam PF00263 Bacterial type II and III secretion system protein 348 523 4.3E-42 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 511 525 2.4E-18 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 274 284 2.4E-18 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 488 506 2.4E-18 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A03115 bcdccdb0bdb3e460beb280e9baaa3be9 547 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 367 2.4E-18 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A01989 b0162ae54645516691647c002b2bff91 940 SUPERFAMILY SSF53067 6 209 8.03E-31 T 12-10-2018 vfu_A01989 b0162ae54645516691647c002b2bff91 940 Gene3D G3DSA:3.30.420.40 211 261 7.5E-33 T 12-10-2018 vfu_A01989 b0162ae54645516691647c002b2bff91 940 SUPERFAMILY SSF53067 223 456 2.25E-20 T 12-10-2018 vfu_A01989 b0162ae54645516691647c002b2bff91 940 Pfam PF00012 Hsp70 protein 130 310 6.3E-15 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01989 b0162ae54645516691647c002b2bff91 940 Gene3D G3DSA:3.30.420.40 8 210 7.5E-33 T 12-10-2018 vfu_A01989 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 165 185 4.8E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01989 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 232 242 4.8E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01989 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 398 418 4.8E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01989 b0162ae54645516691647c002b2bff91 940 PRINTS PR00301 70kDa heat shock protein signature 6 19 4.8E-9 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01989 b0162ae54645516691647c002b2bff91 940 Gene3D G3DSA:3.90.640.10 262 340 7.5E-33 T 12-10-2018 vfu_A01989 b0162ae54645516691647c002b2bff91 940 Pfam PF12531 DNA-K related protein 690 937 6.8E-103 T 12-10-2018 IPR021030 Protein of unknown function DUF3731 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 4.4E-135 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.1E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.1E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.1E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.1E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.1E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.1E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02745 aba8ffde76b94c43f466ce967a4927ea 515 Pfam PF01235 Sodium:alanine symporter family 51 472 5.8E-148 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:3.50.50.60 7 409 1.5E-160 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF51905 2 419 5.34E-72 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 6.5E-9 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.5E-9 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 PIRSF PIRSF000171 1 575 3.1E-44 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.8E-37 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:1.20.58.100 424 538 4.5E-35 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:3.90.700.10 237 363 1.5E-160 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 6.5E-236 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 Gene3D G3DSA:4.10.80.40 543 577 1.8E-13 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF56425 227 358 5.53E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 12-10-2018 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 12-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 SUPERFAMILY SSF46977 444 582 8.63E-44 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00611 e8a37c2a01a200382da93cb78d9be479 601 Pfam PF00890 FAD binding domain 7 397 2.2E-112 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 269 2.2E-77 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 PIRSF PIRSF000193 2 271 3.8E-75 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 269 6.9E-35 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 Gene3D G3DSA:1.10.3730.10 167 273 5.4E-38 T 12-10-2018 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 Gene3D G3DSA:3.40.50.720 2 166 4.4E-53 T 12-10-2018 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 SUPERFAMILY SSF48179 164 271 7.31E-34 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 269 26.045 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 SUPERFAMILY SSF51735 4 162 2.76E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01490 cb6b8220922b2a2de507c345a5a14956 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 101 6.0E-19 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 1.5E-27 T 12-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 6.3E-163 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF81665 250 761 1.7E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF55008 85 162 1.18E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 786 1.2E-124 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 1.3E-155 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF56784 500 782 4.3E-49 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 276 295 1.2E-5 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 296 314 1.2E-5 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 660 677 1.2E-5 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00943 Copper-transporting ATPase signature 135 155 1.2E-5 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Pfam PF00122 E1-E2 ATPase 318 478 5.2E-45 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 1.4E-26 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 1.4E-26 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 1.4E-26 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 1.4E-26 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 1.4E-26 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Pfam PF00403 Heavy-metal-associated domain 93 154 4.2E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 762 9.7E-76 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:3.40.1110.10 511 615 6.4E-68 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 SUPERFAMILY SSF81653 318 402 2.62E-23 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 6.3E-32 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:3.30.70.100 89 173 1.1E-14 T 12-10-2018 vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:3.40.50.1000 482 720 6.4E-68 T 12-10-2018 IPR023214 HAD superfamily vfu_A01903 00655fef4246fbebe8c265da6eeda544 790 Gene3D G3DSA:2.70.150.20 292 407 2.0E-32 T 12-10-2018 vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 SMART SM00347 23 124 1.0E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 SUPERFAMILY SSF46785 5 136 8.54E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 Gene3D G3DSA:1.10.10.10 3 140 5.5E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 Pfam PF01047 MarR family 38 88 1.6E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 4.6E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 4.6E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 4.6E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00234 5e331c9018123778b3c55a5ea94f392c 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 4.6E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00103 b1f31e9d9945edfbd6a28ab1da7c51af 374 Gene3D G3DSA:3.40.640.10 3 256 2.9E-64 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A00103 b1f31e9d9945edfbd6a28ab1da7c51af 374 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 367 9.5E-75 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase vfu_A00103 b1f31e9d9945edfbd6a28ab1da7c51af 374 SUPERFAMILY SSF53383 6 372 2.69E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A00103 b1f31e9d9945edfbd6a28ab1da7c51af 374 Gene3D G3DSA:3.90.1150.10 258 374 1.3E-26 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A00103 b1f31e9d9945edfbd6a28ab1da7c51af 374 PIRSF PIRSF000390 1 374 7.0E-68 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase vfu_A02009 9354c87c21fea5b28c6d884e893e313d 251 SUPERFAMILY SSF52540 10 244 1.52E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02009 9354c87c21fea5b28c6d884e893e313d 251 SMART SM00382 35 222 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02009 9354c87c21fea5b28c6d884e893e313d 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02009 9354c87c21fea5b28c6d884e893e313d 251 Pfam PF00005 ABC transporter 26 174 2.1E-39 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02009 9354c87c21fea5b28c6d884e893e313d 251 PIRSF PIRSF039085 7 250 7.8E-112 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 vfu_A02009 9354c87c21fea5b28c6d884e893e313d 251 Gene3D G3DSA:3.40.50.300 8 251 1.7E-80 T 12-10-2018 vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 SMART SM00866 92 231 5.8E-25 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 Gene3D G3DSA:1.10.10.10 9 75 8.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 SUPERFAMILY SSF46785 10 81 5.8E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 Gene3D G3DSA:3.40.1410.10 77 236 7.7E-33 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 Pfam PF07702 UTRA domain 93 229 6.3E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 SUPERFAMILY SSF64288 59 234 1.13E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 SMART SM00345 12 71 2.0E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 8.3E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 4.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01159 9fa8c5cba4650443a1054704261ea0fd 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 4.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01109 2d350626134ceb38ea8e63f6bc64d008 354 Pfam PF12706 Beta-lactamase superfamily domain 89 283 4.4E-41 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_B01109 2d350626134ceb38ea8e63f6bc64d008 354 PIRSF PIRSF038896 3 334 5.7E-93 T 12-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 vfu_B01109 2d350626134ceb38ea8e63f6bc64d008 354 SUPERFAMILY SSF56281 73 300 1.83E-36 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_B01109 2d350626134ceb38ea8e63f6bc64d008 354 Gene3D G3DSA:3.60.15.10 47 327 8.6E-81 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 Gene3D G3DSA:2.40.10.10 143 255 1.4E-36 T 12-10-2018 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 SUPERFAMILY SSF50494 42 265 4.05E-62 T 12-10-2018 IPR009003 Peptidase S1, PA clan vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 SMART SM00228 256 338 9.6E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 Gene3D G3DSA:2.40.10.10 29 141 1.6E-32 T 12-10-2018 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 Pfam PF13180 PDZ domain 257 346 1.7E-15 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 Pfam PF13365 Trypsin-like peptidase domain 81 215 1.3E-31 T 12-10-2018 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 Gene3D G3DSA:2.30.42.10 256 352 1.1E-23 T 12-10-2018 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 SUPERFAMILY SSF50156 239 346 2.76E-21 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 90 102 1.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 1.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 111 131 1.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 PRINTS PR00834 HtrA/DegQ protease family signature 296 308 1.9E-46 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02956 81bdf9770b40329409cbada3104d84e0 353 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 351 5.0E-174 T 12-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 vfu_B01033 968e7be0c76a0868d39230d1d0d15264 244 SUPERFAMILY SSF46785 10 64 3.25E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01033 968e7be0c76a0868d39230d1d0d15264 244 Pfam PF09339 IclR helix-turn-helix domain 13 61 2.9E-5 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_B01033 968e7be0c76a0868d39230d1d0d15264 244 Pfam PF01614 Bacterial transcriptional regulator 130 238 3.5E-13 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal vfu_B01033 968e7be0c76a0868d39230d1d0d15264 244 SUPERFAMILY SSF55781 83 240 3.63E-31 T 12-10-2018 vfu_B01033 968e7be0c76a0868d39230d1d0d15264 244 Gene3D G3DSA:3.30.450.40 80 240 8.3E-61 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B01033 968e7be0c76a0868d39230d1d0d15264 244 Gene3D G3DSA:1.10.10.10 9 79 8.3E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:3.90.400.10 113 172 7.1E-27 T 12-10-2018 vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 SMART SM00642 18 419 2.5E-162 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:2.60.40.1180 481 561 7.1E-16 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 SUPERFAMILY SSF51445 9 475 1.98E-157 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 Pfam PF16657 Maltogenic Amylase, C-terminal domain 480 555 3.1E-6 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 SUPERFAMILY SSF51011 480 559 1.2E-14 T 12-10-2018 vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:3.20.20.80 1 112 3.8E-50 T 12-10-2018 vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 557 3.8E-263 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 Pfam PF00128 Alpha amylase, catalytic domain 33 376 1.3E-126 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_A02669 0f22ff6f79cf8ff84345f43add274f19 563 Gene3D G3DSA:3.20.20.80 173 480 9.5E-115 T 12-10-2018 vfu_A02214 ee9f9a709f4cac4d046b4d3414ed7df1 423 Pfam PF14031 Putative serine dehydratase domain 314 408 2.2E-15 T 12-10-2018 IPR026956 D-serine dehydratase-like domain vfu_A02214 ee9f9a709f4cac4d046b4d3414ed7df1 423 Gene3D G3DSA:3.20.20.10 54 284 1.1E-134 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A02214 ee9f9a709f4cac4d046b4d3414ed7df1 423 SMART SM01119 314 410 2.6E-31 T 12-10-2018 IPR026956 D-serine dehydratase-like domain vfu_A02214 ee9f9a709f4cac4d046b4d3414ed7df1 423 SUPERFAMILY SSF51419 51 283 4.19E-32 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A02214 ee9f9a709f4cac4d046b4d3414ed7df1 423 Pfam PF01168 Alanine racemase, N-terminal domain 51 276 1.8E-13 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A02214 ee9f9a709f4cac4d046b4d3414ed7df1 423 Gene3D G3DSA:2.40.37.20 37 423 1.1E-134 T 12-10-2018 vfu_B01074 1d6596ee2a07741f5230d7f48775d57e 365 SMART SM00267 200 365 8.7E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B01074 1d6596ee2a07741f5230d7f48775d57e 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 212 362 1.7E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B01074 1d6596ee2a07741f5230d7f48775d57e 365 SUPERFAMILY SSF55073 217 362 9.42E-36 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01074 1d6596ee2a07741f5230d7f48775d57e 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 211 362 5.2E-32 T 12-10-2018 IPR000160 GGDEF domain vfu_B01074 1d6596ee2a07741f5230d7f48775d57e 365 Gene3D G3DSA:3.30.70.270 208 364 7.9E-38 T 12-10-2018 vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 Pfam PF13360 PQQ-like domain 76 310 1.2E-53 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SUPERFAMILY SSF50998 40 376 5.49E-81 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 3.0E-139 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 147 178 0.067 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 106 138 0.003 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 192 223 110.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 63 94 3.6E-6 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 321 353 0.0046 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 280 312 11.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 SMART SM00564 243 274 130.0 T 12-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.072 T 12-10-2018 IPR017687 Outer membrane protein assembly factor BamB vfu_A02772 0622967347d79dfced3e2aeb91d43019 385 Gene3D G3DSA:2.130.10.10 19 385 1.7E-99 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 Gene3D G3DSA:3.40.50.300 181 364 3.9E-64 T 12-10-2018 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 Gene3D G3DSA:1.10.8.60 365 429 3.4E-18 T 12-10-2018 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 SMART SM00065 21 169 4.7E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 SUPERFAMILY SSF55781 5 159 3.05E-18 T 12-10-2018 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 Pfam PF00158 Sigma-54 interaction domain 194 361 2.7E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 SUPERFAMILY SSF46689 470 517 5.38E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 SMART SM00382 214 357 3.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 Gene3D G3DSA:3.30.450.40 2 175 2.0E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 Gene3D G3DSA:1.10.10.60 465 521 1.0E-8 T 12-10-2018 vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 SUPERFAMILY SSF52540 193 429 1.7E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00683 20b7e74d3980926630b1f3e17bd80c5a 528 Pfam PF01590 GAF domain 24 157 1.5E-8 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_A00290 03162bb1f549590d828ff152dd3c15b7 313 SUPERFAMILY SSF56752 7 307 1.22E-105 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 vfu_A00290 03162bb1f549590d828ff152dd3c15b7 313 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 vfu_A00290 03162bb1f549590d828ff152dd3c15b7 313 Gene3D G3DSA:3.30.470.10 10 127 2.3E-107 T 12-10-2018 vfu_A00290 03162bb1f549590d828ff152dd3c15b7 313 Pfam PF01063 Amino-transferase class IV 36 268 2.2E-47 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 vfu_A00290 03162bb1f549590d828ff152dd3c15b7 313 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.3E-143 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 vfu_A00290 03162bb1f549590d828ff152dd3c15b7 313 Gene3D G3DSA:3.20.10.10 138 289 2.3E-107 T 12-10-2018 vfu_B00617 cfe0a44dc90494026097afbba63a6156 269 SMART SM00062 39 262 1.8E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00617 cfe0a44dc90494026097afbba63a6156 269 Gene3D G3DSA:3.40.190.10 40 259 1.9E-70 T 12-10-2018 vfu_B00617 cfe0a44dc90494026097afbba63a6156 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 2.9E-59 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00617 cfe0a44dc90494026097afbba63a6156 269 Gene3D G3DSA:3.40.190.10 124 221 1.9E-70 T 12-10-2018 vfu_B00617 cfe0a44dc90494026097afbba63a6156 269 SUPERFAMILY SSF53850 7 262 9.0E-68 T 12-10-2018 vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 4.9E-17 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 Gene3D G3DSA:1.10.10.10 1 59 3.4E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 SMART SM00420 6 58 1.4E-22 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 Pfam PF00455 DeoR C terminal sensor domain 75 231 7.6E-46 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 SUPERFAMILY SSF46785 5 62 5.81E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.9E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.9E-6 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 SUPERFAMILY SSF100950 75 232 1.17E-26 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B00944 b4f6910f4450589d2753900a16169e5e 266 SMART SM01134 73 233 7.2E-61 T 12-10-2018 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 1.2E-40 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 Gene3D G3DSA:3.30.300.30 152 247 4.2E-9 T 12-10-2018 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 8.4E-23 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 8.4E-23 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 8.4E-23 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 8.4E-23 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 8.4E-23 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 5.4E-76 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 PIRSF PIRSF004862 29 580 4.2E-160 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01190 7a6c2cf5c789bbffa820142e3c0492d0 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 3.8E-55 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF vfu_A02843 76dab1fe1b70192571d74651125d0bca 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 3.2E-12 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 vfu_A02843 76dab1fe1b70192571d74651125d0bca 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 3.3E-45 T 12-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain vfu_A02843 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.30.1490.20 293 359 1.4E-6 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A02843 76dab1fe1b70192571d74651125d0bca 483 SUPERFAMILY SSF56059 268 476 2.47E-41 T 12-10-2018 vfu_A02843 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.40.50.20 206 292 6.7E-8 T 12-10-2018 vfu_A02843 76dab1fe1b70192571d74651125d0bca 483 Gene3D G3DSA:3.30.470.20 361 473 3.3E-19 T 12-10-2018 vfu_A01222 9f519aedb55c87e7e29a6ad2bddaa6e4 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 2.5E-73 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 vfu_A01222 9f519aedb55c87e7e29a6ad2bddaa6e4 175 Pfam PF00258 Flavodoxin 6 160 5.4E-33 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 vfu_A01222 9f519aedb55c87e7e29a6ad2bddaa6e4 175 PIRSF PIRSF038996 1 172 1.3E-68 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 vfu_A01222 9f519aedb55c87e7e29a6ad2bddaa6e4 175 Gene3D G3DSA:3.40.50.360 3 175 1.2E-57 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01222 9f519aedb55c87e7e29a6ad2bddaa6e4 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 vfu_A01222 9f519aedb55c87e7e29a6ad2bddaa6e4 175 SUPERFAMILY SSF52218 4 171 2.55E-53 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B00600 1a2f64ca0bad1683910cf4d856131295 262 SUPERFAMILY SSF46894 21 104 3.12E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00600 1a2f64ca0bad1683910cf4d856131295 262 Gene3D G3DSA:1.10.10.10 8 109 6.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00600 1a2f64ca0bad1683910cf4d856131295 262 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 104 8.7E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00600 1a2f64ca0bad1683910cf4d856131295 262 SMART SM00862 27 104 1.2E-10 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02589 a47225804e8e4d50727120a6a4777886 212 SMART SM00900 100 192 2.5E-33 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 vfu_A02589 a47225804e8e4d50727120a6a4777886 212 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 25.65 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 vfu_A02589 a47225804e8e4d50727120a6a4777886 212 Pfam PF04205 FMN-binding domain 100 187 1.5E-20 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 vfu_A02589 a47225804e8e4d50727120a6a4777886 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 8.5E-64 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 vfu_A02589 a47225804e8e4d50727120a6a4777886 212 PIRSF PIRSF006091 1 206 1.3E-75 T 12-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.50.100 129 163 3.9E-11 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 112 320 1.8E-76 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.30.170 115 128 3.9E-11 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Pfam PF11604 Copper binding periplasmic protein CusF 419 484 1.4E-18 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 216 393 1.4E-30 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.420.20 103 114 3.9E-11 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.420.20 326 416 1.1E-20 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.50.320 417 485 1.1E-14 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:1.10.287.470 164 176 3.9E-11 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 SUPERFAMILY SSF111369 128 325 8.89E-16 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.30.170 248 321 2.0E-27 T 12-10-2018 vfu_A00177 9ea80c89b43d7f4b8e7a61387a8c3d9a 490 Gene3D G3DSA:2.40.50.100 211 247 2.0E-27 T 12-10-2018 vfu_B01258 b09dd9984bce5901702c3369674f2b59 158 Pfam PF07012 Curlin associated repeat 55 85 5.0E-9 T 12-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 vfu_B01258 b09dd9984bce5901702c3369674f2b59 158 Pfam PF07012 Curlin associated repeat 92 118 1.4E-4 T 12-10-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 vfu_A01725 9a28b2cc0690a456287c821c18036552 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 7.8E-29 T 12-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 vfu_A01725 9a28b2cc0690a456287c821c18036552 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 145 2.8E-32 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 vfu_A01725 9a28b2cc0690a456287c821c18036552 414 SUPERFAMILY SSF51735 1 179 1.09E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01725 9a28b2cc0690a456287c821c18036552 414 Gene3D G3DSA:3.40.50.720 4 398 8.9E-142 T 12-10-2018 vfu_A01725 9a28b2cc0690a456287c821c18036552 414 Gene3D G3DSA:3.30.360.10 159 355 8.9E-142 T 12-10-2018 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 968 1.1E-163 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF01336 OB-fold nucleic acid binding domain 933 1001 3.9E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF02811 PHP domain 8 99 1.9E-10 T 12-10-2018 IPR004013 PHP domain GO:0003824 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 1.6E-145 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 Gene3D G3DSA:3.20.20.140 1 247 4.4E-44 T 12-10-2018 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 SMART SM00481 4 73 3.2E-7 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 Pfam PF14579 Helix-hairpin-helix motif 768 854 6.2E-18 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01327 bc95e5f9619e6403391a27764e3c254a 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1023 13.199 T 12-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_B00722 80e03d14b80a65b25e49637f54b74779 137 Gene3D G3DSA:3.30.160.20 1 137 7.0E-37 T 12-10-2018 vfu_B00722 80e03d14b80a65b25e49637f54b74779 137 Pfam PF00472 RF-1 domain 8 132 2.2E-23 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 vfu_B00722 80e03d14b80a65b25e49637f54b74779 137 SUPERFAMILY SSF75620 8 116 5.89E-13 T 12-10-2018 vfu_B00722 80e03d14b80a65b25e49637f54b74779 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 vfu_A01588 ba292a4c1a5e41587c8f99b166d01ff0 531 Pfam PF03553 Na+/H+ antiporter family 165 495 1.8E-100 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 vfu_A02720 4567fe4e4a6b683522ed20fb4c33aa60 281 Pfam PF00756 Putative esterase 23 273 4.7E-63 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 vfu_A02720 4567fe4e4a6b683522ed20fb4c33aa60 281 Gene3D G3DSA:3.40.50.1820 4 281 1.5E-96 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02720 4567fe4e4a6b683522ed20fb4c33aa60 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 6 278 3.9E-120 T 12-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 vfu_A02720 4567fe4e4a6b683522ed20fb4c33aa60 281 SUPERFAMILY SSF53474 3 280 1.19E-92 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01553 e4665408db584debe054915980255519 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 4.1E-34 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01553 e4665408db584debe054915980255519 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 5.6E-172 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 Gene3D G3DSA:1.10.287.40 1 106 5.9E-21 T 12-10-2018 vfu_A01553 e4665408db584debe054915980255519 435 SUPERFAMILY SSF55681 118 433 1.4E-97 T 12-10-2018 vfu_A01553 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.0E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.0E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.0E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.0E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.0E-33 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.959 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 Gene3D G3DSA:3.30.930.10 107 434 4.7E-113 T 12-10-2018 vfu_A01553 e4665408db584debe054915980255519 435 SUPERFAMILY SSF46589 1 114 2.09E-26 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 vfu_A01553 e4665408db584debe054915980255519 435 PIRSF PIRSF001529 1 435 3.0E-189 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 vfu_A01553 e4665408db584debe054915980255519 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.7E-28 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 vfu_A00681 f5724fdc5ebb2c09b2d171a9ad2e7275 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00681 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Pfam PF00410 Ribosomal protein S8 5 129 5.7E-47 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00681 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Gene3D G3DSA:3.30.1370.30 2 72 2.8E-26 T 12-10-2018 vfu_A00681 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.746 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00681 f5724fdc5ebb2c09b2d171a9ad2e7275 130 SUPERFAMILY SSF56047 2 129 1.31E-43 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00681 f5724fdc5ebb2c09b2d171a9ad2e7275 130 Gene3D G3DSA:3.30.1490.10 73 130 2.1E-24 T 12-10-2018 vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 1.6E-49 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 328 3.6E-33 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 SUPERFAMILY SSF52283 1 136 2.55E-39 T 12-10-2018 vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 SUPERFAMILY SSF51735 103 299 2.52E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 Gene3D G3DSA:3.40.50.720 103 298 1.1E-131 T 12-10-2018 vfu_B00666 ecb9a8a341ac7bee6bb559fa5a42fdde 331 Gene3D G3DSA:3.40.50.720 4 317 1.1E-131 T 12-10-2018 vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.236 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 Gene3D G3DSA:2.40.30.60 6 102 1.0E-32 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 SUPERFAMILY SSF50447 15 102 2.15E-23 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 Pfam PF05239 PRC-barrel domain 105 179 4.4E-12 T 12-10-2018 IPR027275 PRC-barrel domain vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 SUPERFAMILY SSF50346 108 182 2.55E-19 T 12-10-2018 IPR011033 PRC-barrel-like superfamily vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 Pfam PF01782 RimM N-terminal domain 17 97 1.9E-24 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 Gene3D G3DSA:2.30.30.240 103 184 3.4E-31 T 12-10-2018 vfu_A02959 77932e88fdd448ccc60c49a26d1afae6 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 183 7.5E-56 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 SUPERFAMILY SSF53623 98 299 2.75E-52 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 436 7.2E-138 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 Pfam PF08245 Mur ligase middle domain 113 281 1.1E-29 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 438 33.201 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 Gene3D G3DSA:3.90.190.20 302 435 7.6E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 304 354 1.2E-5 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 Gene3D G3DSA:3.40.50.720 6 96 9.9E-21 T 12-10-2018 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 SUPERFAMILY SSF53244 301 437 5.49E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 Gene3D G3DSA:3.40.1190.10 97 301 1.4E-64 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02934 7e780fc9fee7c6bb1119211419fa9999 439 SUPERFAMILY SSF51984 8 97 4.45E-17 T 12-10-2018 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 SUPERFAMILY SSF53738 6 180 7.46E-37 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Gene3D G3DSA:3.30.310.50 372 454 7.1E-22 T 12-10-2018 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 256 1.4E-23 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 SUPERFAMILY SSF55957 371 454 1.38E-17 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 SUPERFAMILY SSF53738 156 259 6.28E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 452 5.1E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Gene3D G3DSA:3.40.120.10 4 148 2.9E-53 T 12-10-2018 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 SUPERFAMILY SSF53738 261 365 1.57E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 132 9.5E-36 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Gene3D G3DSA:3.40.120.10 253 369 4.1E-33 T 12-10-2018 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Gene3D G3DSA:3.40.120.10 175 252 5.1E-30 T 12-10-2018 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 366 8.1E-24 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 3.7E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 3.7E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 3.7E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00534 f3fd59a32816ff40e66ee9c67c1f3b67 454 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 3.7E-29 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00693 f972b2ba293c4b3922e3af6dd192d342 165 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 11 160 8.0E-40 T 12-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE vfu_A00693 f972b2ba293c4b3922e3af6dd192d342 165 SUPERFAMILY SSF52047 72 144 1.51E-5 T 12-10-2018 vfu_B01062 2c7f0850f09f43d55cabae905a5e5c6e 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_B01062 2c7f0850f09f43d55cabae905a5e5c6e 236 Pfam PF01048 Phosphorylase superfamily 16 232 1.2E-37 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 vfu_B01062 2c7f0850f09f43d55cabae905a5e5c6e 236 SUPERFAMILY SSF53167 3 234 9.56E-93 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 vfu_B01062 2c7f0850f09f43d55cabae905a5e5c6e 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.666 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 vfu_B01062 2c7f0850f09f43d55cabae905a5e5c6e 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 1.1E-111 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 vfu_B01062 2c7f0850f09f43d55cabae905a5e5c6e 236 Gene3D G3DSA:3.40.50.1580 1 236 1.6E-77 T 12-10-2018 vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 SUPERFAMILY SSF52540 94 362 1.85E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 6.9E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 Gene3D G3DSA:3.40.50.12240 17 439 1.8E-155 T 12-10-2018 vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 1.8E-193 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 SMART SM00382 158 342 7.6E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01193 43ecc2ee2a813b5142d83cf973c51123 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 6.9E-174 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00020 54303e8fa474347a0f52a681a55f3d2f 370 SUPERFAMILY SSF54862 165 314 1.72E-21 T 12-10-2018 vfu_A00020 54303e8fa474347a0f52a681a55f3d2f 370 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.92 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 vfu_A00020 54303e8fa474347a0f52a681a55f3d2f 370 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.1E-23 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 vfu_A00020 54303e8fa474347a0f52a681a55f3d2f 370 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 343 1.0E-152 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 vfu_A00020 54303e8fa474347a0f52a681a55f3d2f 370 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 4.2E-20 T 12-10-2018 vfu_A00020 54303e8fa474347a0f52a681a55f3d2f 370 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B00806 57e80dc16a154f864093c406d91ac805 220 SUPERFAMILY SSF116726 135 217 2.62E-15 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_B00806 57e80dc16a154f864093c406d91ac805 220 SUPERFAMILY SSF51735 6 136 5.55E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00806 57e80dc16a154f864093c406d91ac805 220 Gene3D G3DSA:3.40.50.720 2 140 9.7E-33 T 12-10-2018 vfu_B00806 57e80dc16a154f864093c406d91ac805 220 Pfam PF02080 TrkA-C domain 154 213 4.0E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_B00806 57e80dc16a154f864093c406d91ac805 220 Gene3D G3DSA:3.30.70.1450 141 216 1.3E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_B00806 57e80dc16a154f864093c406d91ac805 220 Pfam PF02254 TrkA-N domain 8 123 1.7E-25 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 Gene3D G3DSA:3.40.50.2020 148 290 6.4E-134 T 12-10-2018 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 SMART SM01400 4 121 7.5E-78 T 12-10-2018 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.1E-50 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 SUPERFAMILY SSF53271 69 299 6.39E-65 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 305 1.9E-121 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 Gene3D G3DSA:3.40.50.2020 7 300 6.4E-134 T 12-10-2018 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 304 9.9E-25 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 47.843 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 vfu_A01138 d823cb178df5eec09cf04a3b61dc3436 330 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 Pfam PF00206 Lyase 23 355 2.8E-103 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 Pfam PF10415 Fumarase C C-terminus 421 474 4.1E-18 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 SUPERFAMILY SSF48557 13 468 5.15E-143 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 Gene3D G3DSA:1.20.200.10 153 420 3.3E-111 T 12-10-2018 vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 Gene3D G3DSA:1.10.275.10 16 152 1.2E-58 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.7E-25 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.7E-25 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.7E-25 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.7E-25 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 5.5E-253 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 vfu_A00567 2db0242e62450257b1cab24feb30b1c4 483 Gene3D G3DSA:1.10.40.30 421 470 1.6E-29 T 12-10-2018 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 Pfam PF00085 Thioredoxin 5 106 1.9E-32 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 Gene3D G3DSA:3.40.30.10 1 108 1.5E-34 T 12-10-2018 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 PIRSF PIRSF000077 2 108 2.9E-42 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 SUPERFAMILY SSF52833 3 107 2.21E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.6E-37 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 12-10-2018 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 12-10-2018 vfu_A00059 5c104daaa1653a4372aabd15c77cfabf 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 12-10-2018 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 Pfam PF14842 FliG N-terminal domain 1 85 9.5E-19 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 SUPERFAMILY SSF48029 97 306 3.27E-55 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 SUPERFAMILY SSF48029 1 90 5.62E-14 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 Gene3D G3DSA:1.10.220.30 72 175 2.3E-24 T 12-10-2018 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 Gene3D G3DSA:1.10.220.30 178 311 5.0E-27 T 12-10-2018 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 Gene3D G3DSA:1.10.220.30 1 69 1.0E-13 T 12-10-2018 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 PRINTS PR00954 Flagellar motor switch protein FliG signature 17 43 5.9E-24 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 228 5.9E-24 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 280 5.9E-24 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 PRINTS PR00954 Flagellar motor switch protein FliG signature 97 120 5.9E-24 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 5.9E-24 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 Pfam PF01706 FliG C-terminal domain 200 306 7.9E-26 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal vfu_A01406 20198bf83a8b5bac1f9ebed7edf6f304 315 Pfam PF14841 FliG middle domain 99 170 7.6E-21 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF51445 332 772 2.19E-142 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF55545 208 331 3.53E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 1.1E-14 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 5.2E-108 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF49384 26 197 1.32E-65 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 8.7E-62 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:3.20.20.80 330 817 5.2E-163 T 12-10-2018 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 7.3E-48 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:2.60.40.10 818 881 6.1E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:3.30.379.10 205 329 3.1E-24 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Gene3D G3DSA:2.60.40.290 25 167 9.5E-53 T 12-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 SUPERFAMILY SSF81296 780 881 2.38E-36 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 SMART SM01081 34 195 4.9E-90 T 12-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A01106 fade360b978b3d2713c58a9f1e728ef3 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 2.0E-28 T 12-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A01938 b6b4a13e03053fcf09fa0b5141a11a1a 157 SUPERFAMILY SSF55781 4 144 1.54E-38 T 12-10-2018 vfu_A01938 b6b4a13e03053fcf09fa0b5141a11a1a 157 Gene3D G3DSA:3.30.450.40 1 157 2.3E-62 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_A01938 b6b4a13e03053fcf09fa0b5141a11a1a 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site vfu_A01938 b6b4a13e03053fcf09fa0b5141a11a1a 157 Pfam PF13185 GAF domain 42 146 9.6E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Gene3D G3DSA:3.40.50.720 1 279 3.3E-113 T 12-10-2018 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Gene3D G3DSA:3.40.50.720 93 258 3.3E-113 T 12-10-2018 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 SUPERFAMILY SSF52283 4 130 2.34E-22 T 12-10-2018 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Gene3D G3DSA:3.30.1370.170 294 381 1.7E-34 T 12-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 257 4.7E-33 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 SUPERFAMILY SSF51735 93 258 1.44E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 281 1.5E-22 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 7.8E-29 T 12-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 vfu_A01215 b92149c39b201dd259c8ec16c8bbf1a0 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 45.443 T 12-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Gene3D G3DSA:3.40.1190.10 91 313 9.1E-57 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Gene3D G3DSA:3.40.50.720 1 90 1.4E-35 T 12-10-2018 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 384 3.2E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.052 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 SUPERFAMILY SSF53623 95 308 3.27E-52 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 SUPERFAMILY SSF51984 1 89 6.15E-23 T 12-10-2018 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 8.1E-263 T 12-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Gene3D G3DSA:3.90.190.20 314 450 1.8E-31 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 SUPERFAMILY SSF53244 311 448 3.14E-38 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Pfam PF01225 Mur ligase family, catalytic domain 2 99 2.9E-18 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 vfu_A00721 86879d5a6b0f675f27b4a989f7d10bfa 456 Pfam PF08245 Mur ligase middle domain 108 291 2.4E-21 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 vfu_B00461 a41e78a0ee51c43997997320e7c81e68 310 SUPERFAMILY SSF46785 5 84 6.35E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00461 a41e78a0ee51c43997997320e7c81e68 310 SUPERFAMILY SSF53850 90 301 3.1E-32 T 12-10-2018 vfu_B00461 a41e78a0ee51c43997997320e7c81e68 310 Gene3D G3DSA:1.10.10.10 4 90 5.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00461 a41e78a0ee51c43997997320e7c81e68 310 Gene3D G3DSA:3.40.190.290 91 296 5.5E-45 T 12-10-2018 vfu_B00461 a41e78a0ee51c43997997320e7c81e68 310 Pfam PF03466 LysR substrate binding domain 90 297 7.0E-31 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00461 a41e78a0ee51c43997997320e7c81e68 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00233 26c0d8a88f711a6b15df8303add08138 563 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 7.6E-41 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain vfu_B00233 26c0d8a88f711a6b15df8303add08138 563 Gene3D G3DSA:3.40.190.10 123 312 5.7E-35 T 12-10-2018 vfu_B00233 26c0d8a88f711a6b15df8303add08138 563 SUPERFAMILY SSF53850 121 560 7.78E-57 T 12-10-2018 vfu_B00233 26c0d8a88f711a6b15df8303add08138 563 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 307 2.3E-19 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_B00229 3f9079621f043019996c929724ee756c 895 Pfam PF13380 CoA binding domain 11 136 2.1E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 vfu_B00229 3f9079621f043019996c929724ee756c 895 SMART SM00881 7 102 6.5E-22 T 12-10-2018 IPR003781 CoA-binding GO:0048037 vfu_B00229 3f9079621f043019996c929724ee756c 895 SUPERFAMILY SSF51735 2 141 5.51E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00229 3f9079621f043019996c929724ee756c 895 Gene3D G3DSA:3.30.1490.20 511 588 1.1E-56 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_B00229 3f9079621f043019996c929724ee756c 895 SUPERFAMILY SSF55729 722 878 7.5E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00229 3f9079621f043019996c929724ee756c 895 Gene3D G3DSA:3.30.470.20 493 702 1.1E-56 T 12-10-2018 vfu_B00229 3f9079621f043019996c929724ee756c 895 SUPERFAMILY SSF56059 493 699 4.91E-29 T 12-10-2018 vfu_B00229 3f9079621f043019996c929724ee756c 895 Gene3D G3DSA:3.40.50.261 295 465 2.4E-52 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_B00229 3f9079621f043019996c929724ee756c 895 Gene3D G3DSA:3.40.630.30 729 895 8.5E-40 T 12-10-2018 vfu_B00229 3f9079621f043019996c929724ee756c 895 Gene3D G3DSA:3.40.50.720 1 135 5.4E-33 T 12-10-2018 vfu_B00229 3f9079621f043019996c929724ee756c 895 SUPERFAMILY SSF52210 297 457 9.16E-43 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_B00229 3f9079621f043019996c929724ee756c 895 SUPERFAMILY SSF52210 131 292 1.96E-36 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_B00229 3f9079621f043019996c929724ee756c 895 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 2.6E-50 T 12-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain vfu_B00229 3f9079621f043019996c929724ee756c 895 Gene3D G3DSA:3.40.50.261 136 293 2.0E-50 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_B00229 3f9079621f043019996c929724ee756c 895 Pfam PF13549 ATP-grasp domain 491 706 1.8E-68 T 12-10-2018 vfu_B00229 3f9079621f043019996c929724ee756c 895 Pfam PF00583 Acetyltransferase (GNAT) family 772 875 6.9E-8 T 12-10-2018 IPR000182 GNAT domain vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF55124 351 427 9.65E-21 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF56014 154 349 2.22E-60 T 12-10-2018 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 419 6.9E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 141 1.2E-12 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF56014 434 566 1.57E-32 T 12-10-2018 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 SUPERFAMILY SSF55124 19 150 9.16E-27 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.30.413.10 431 574 8.4E-35 T 12-10-2018 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.192 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.30.413.10 205 342 1.2E-43 T 12-10-2018 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 1.9E-45 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 4.7E-9 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.90.480.10 343 429 2.2E-29 T 12-10-2018 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Gene3D G3DSA:3.90.480.10 86 172 2.2E-22 T 12-10-2018 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 436 547 6.3E-5 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03134 50529302a1fb0226a70e717d29e2acc6 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 8.2E-283 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 402 1.0E-185 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 Gene3D G3DSA:4.10.320.10 102 151 7.9E-22 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 Pfam PF00364 Biotin-requiring enzyme 4 76 1.0E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 SUPERFAMILY SSF47005 107 149 1.31E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 SUPERFAMILY SSF51230 1 94 1.07E-24 T 12-10-2018 IPR011053 Single hybrid motif vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 Pfam PF02817 e3 binding domain 113 146 3.5E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 SUPERFAMILY SSF52777 172 401 4.89E-89 T 12-10-2018 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 172 400 1.9E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 Gene3D G3DSA:2.40.50.100 1 79 1.3E-22 T 12-10-2018 vfu_A01235 6cc1dbfd06036e88f03576c199d0de5e 402 Gene3D G3DSA:3.30.559.10 170 402 1.5E-96 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_B01447 6d106a984a393b98a62c078b3a751c6c 380 Gene3D G3DSA:3.40.50.1970 1 181 2.2E-45 T 12-10-2018 vfu_B01447 6d106a984a393b98a62c078b3a751c6c 380 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 170 198 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_B01447 6d106a984a393b98a62c078b3a751c6c 380 Gene3D G3DSA:1.20.1090.10 183 379 3.3E-70 T 12-10-2018 vfu_B01447 6d106a984a393b98a62c078b3a751c6c 380 SUPERFAMILY SSF56796 4 378 1.06E-112 T 12-10-2018 vfu_B01447 6d106a984a393b98a62c078b3a751c6c 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 372 2.7E-111 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_A03043 d02a7604ccaafe863314ab201fefa11f 166 Pfam PF10263 SprT-like family 18 114 3.5E-17 T 12-10-2018 IPR006640 SprT-like vfu_A03043 d02a7604ccaafe863314ab201fefa11f 166 Pfam PF17283 SprT-like zinc ribbon domain 121 161 8.0E-10 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain vfu_A03043 d02a7604ccaafe863314ab201fefa11f 166 SMART SM00731 12 161 1.2E-51 T 12-10-2018 IPR006640 SprT-like vfu_A03043 d02a7604ccaafe863314ab201fefa11f 166 Hamap MF_00746 Protein SprT [sprT]. 8 161 39.458 T 12-10-2018 IPR023483 Uncharacterised protein family SprT vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 SUPERFAMILY SSF109604 227 399 1.75E-34 T 12-10-2018 vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 Pfam PF01966 HD domain 32 143 1.2E-4 T 12-10-2018 IPR006674 HD domain vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 Pfam PF01966 HD domain 239 359 2.0E-18 T 12-10-2018 IPR006674 HD domain vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 SUPERFAMILY SSF109604 23 184 2.92E-15 T 12-10-2018 vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 Gene3D G3DSA:1.10.3210.10 216 411 1.4E-50 T 12-10-2018 vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 SMART SM00471 25 154 3.9 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 SMART SM00471 234 369 1.8E-14 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B01415 917cb5c78458bdad612e62e0ed599fa4 424 Gene3D G3DSA:1.10.3210.10 12 192 6.3E-19 T 12-10-2018 vfu_B00787 4e81fd151d6d89124c6c394c0eab5319 303 Gene3D G3DSA:3.40.50.300 144 303 1.2E-48 T 12-10-2018 vfu_B00787 4e81fd151d6d89124c6c394c0eab5319 303 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 286 2.5E-10 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_B00787 4e81fd151d6d89124c6c394c0eab5319 303 SUPERFAMILY SSF52540 148 303 1.03E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00787 4e81fd151d6d89124c6c394c0eab5319 303 SUPERFAMILY SSF81923 7 104 2.75E-11 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_B00787 4e81fd151d6d89124c6c394c0eab5319 303 Gene3D G3DSA:1.10.1780.10 1 130 3.1E-21 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_B00787 4e81fd151d6d89124c6c394c0eab5319 303 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 282 294 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 SMART SM00895 99 223 2.7E-17 T 12-10-2018 IPR011711 GntR, C-terminal vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 70 3.3E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.6E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.6E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 SMART SM00345 11 70 1.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 SUPERFAMILY SSF46785 3 85 6.81E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 Gene3D G3DSA:1.10.10.10 2 76 5.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 Pfam PF07729 FCD domain 99 222 5.2E-16 T 12-10-2018 IPR011711 GntR, C-terminal vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 Gene3D G3DSA:1.20.120.530 98 231 2.9E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_B01470 60d5c214f91e33f57fb0cb7bc17a2160 249 SUPERFAMILY SSF48008 97 230 4.45E-22 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A01828 ce92dfb8320ff0a9a0d14f51c9200b8d 378 Gene3D G3DSA:2.60.120.10 66 167 3.5E-11 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01828 ce92dfb8320ff0a9a0d14f51c9200b8d 378 Pfam PF04209 homogentisate 1,2-dioxygenase 85 377 1.6E-23 T 12-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 vfu_A01828 ce92dfb8320ff0a9a0d14f51c9200b8d 378 SUPERFAMILY SSF51182 57 377 8.9E-90 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A01656 b5410ebb670b4e9f02fce52887335fea 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 306 2.1E-15 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A01656 b5410ebb670b4e9f02fce52887335fea 330 Pfam PF00005 ABC transporter 25 188 7.1E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01656 b5410ebb670b4e9f02fce52887335fea 330 SUPERFAMILY SSF52540 4 269 1.0E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01656 b5410ebb670b4e9f02fce52887335fea 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 1.7E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A01656 b5410ebb670b4e9f02fce52887335fea 330 Gene3D G3DSA:3.40.50.300 2 329 1.5E-71 T 12-10-2018 vfu_A02592 e0579698a8d46ac05f82b96cf75a270c 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 vfu_A02592 e0579698a8d46ac05f82b96cf75a270c 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 2.3E-68 T 12-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 vfu_A02592 e0579698a8d46ac05f82b96cf75a270c 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 vfu_A02592 e0579698a8d46ac05f82b96cf75a270c 138 Gene3D G3DSA:3.10.180.10 3 136 3.6E-51 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A02592 e0579698a8d46ac05f82b96cf75a270c 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 1.1E-23 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_A02592 e0579698a8d46ac05f82b96cf75a270c 138 SUPERFAMILY SSF54593 2 130 1.01E-36 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01305 0da649dfffa13efcad945eaa0ab64b78 341 SUPERFAMILY SSF53659 4 336 1.19E-100 T 12-10-2018 vfu_A01305 0da649dfffa13efcad945eaa0ab64b78 341 Pfam PF02504 Fatty acid synthesis protein 5 327 4.7E-101 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 vfu_A01305 0da649dfffa13efcad945eaa0ab64b78 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 7.4E-106 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 vfu_A01305 0da649dfffa13efcad945eaa0ab64b78 341 PIRSF PIRSF002465 2 339 2.5E-124 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 vfu_A01305 0da649dfffa13efcad945eaa0ab64b78 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 135.991 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 vfu_A01305 0da649dfffa13efcad945eaa0ab64b78 341 Gene3D G3DSA:3.40.718.10 2 340 1.0E-118 T 12-10-2018 vfu_A01276 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:3.40.50.140 2 157 1.5E-59 T 12-10-2018 vfu_A01276 668b25452b61858484c86231b91e4879 650 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 66.057 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 SUPERFAMILY SSF56712 3 612 7.32E-182 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain vfu_A01276 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:1.10.460.10 163 607 2.5E-163 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 vfu_A01276 668b25452b61858484c86231b91e4879 650 SMART SM00437 284 563 2.8E-90 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 2.5E-237 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:2.70.20.10 218 493 2.5E-163 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 vfu_A01276 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 1.2E-26 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 SMART SM00493 2 125 4.5E-27 T 12-10-2018 IPR006171 TOPRIM domain vfu_A01276 668b25452b61858484c86231b91e4879 650 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 vfu_A01276 668b25452b61858484c86231b91e4879 650 SMART SM00436 129 224 8.7E-30 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 Pfam PF01751 Toprim domain 4 124 5.3E-16 T 12-10-2018 IPR006171 TOPRIM domain vfu_A01276 668b25452b61858484c86231b91e4879 650 Pfam PF01131 DNA topoisomerase 159 598 1.9E-113 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 vfu_A01276 668b25452b61858484c86231b91e4879 650 Gene3D G3DSA:1.10.290.10 293 422 2.5E-163 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 SUPERFAMILY SSF46689 229 279 1.16E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 Gene3D G3DSA:1.10.10.60 177 282 1.5E-24 T 12-10-2018 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 Gene3D G3DSA:2.60.120.280 31 137 2.5E-10 T 12-10-2018 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 SMART SM00342 193 276 7.7E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 Pfam PF12833 Helix-turn-helix domain 199 276 1.2E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 Pfam PF02311 AraC-like ligand binding domain 34 121 4.8E-8 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B00646 b4970386670d9279764dcc9a1c93ba0b 285 SUPERFAMILY SSF51215 32 114 1.57E-16 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_B01249 837e0a588d30ec0b88e47dc721fd37e0 202 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 99 189 3.6E-21 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 vfu_B01249 837e0a588d30ec0b88e47dc721fd37e0 202 SMART SM00702 13 189 2.1E-38 T 12-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 vfu_B01249 837e0a588d30ec0b88e47dc721fd37e0 202 Gene3D G3DSA:2.60.120.620 2 193 3.7E-54 T 12-10-2018 vfu_A02478 ebf70bd07bfa7b1999fa36070e349f7d 233 SUPERFAMILY SSF53067 4 108 4.75E-32 T 12-10-2018 vfu_A02478 ebf70bd07bfa7b1999fa36070e349f7d 233 Gene3D G3DSA:3.30.420.40 5 202 1.2E-81 T 12-10-2018 vfu_A02478 ebf70bd07bfa7b1999fa36070e349f7d 233 SUPERFAMILY SSF53067 112 219 1.29E-27 T 12-10-2018 vfu_A02478 ebf70bd07bfa7b1999fa36070e349f7d 233 Pfam PF00814 Glycoprotease family 30 152 1.2E-31 T 12-10-2018 IPR000905 Gcp-like domain vfu_A02478 ebf70bd07bfa7b1999fa36070e349f7d 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 5.1E-69 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 vfu_A02478 ebf70bd07bfa7b1999fa36070e349f7d 233 Gene3D G3DSA:3.30.420.40 96 190 1.2E-81 T 12-10-2018 vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 SUPERFAMILY SSF46785 10 159 4.49E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 84 118 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 SMART SM00347 42 145 5.5E-23 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 Pfam PF01047 MarR family 50 110 4.4E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 Gene3D G3DSA:1.10.10.10 1 160 1.7E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 3.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 3.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 3.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00761 a7c77e508b33ae1f079f4ef77a0df9af 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 3.1E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A02467 e39d5856615179c0bcd60a5d3305deb6 92 Pfam PF05166 YcgL domain 3 74 2.6E-33 T 12-10-2018 IPR027354 YcgL domain vfu_A02467 e39d5856615179c0bcd60a5d3305deb6 92 Gene3D G3DSA:3.10.510.20 1 73 1.3E-31 T 12-10-2018 IPR038068 YcgL-like superfamily vfu_A02467 e39d5856615179c0bcd60a5d3305deb6 92 SUPERFAMILY SSF160191 1 90 4.58E-38 T 12-10-2018 IPR038068 YcgL-like superfamily vfu_A02467 e39d5856615179c0bcd60a5d3305deb6 92 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 3.0E-30 T 12-10-2018 IPR027354 YcgL domain vfu_A02467 e39d5856615179c0bcd60a5d3305deb6 92 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 27.99 T 12-10-2018 IPR027354 YcgL domain vfu_A01360 ec0d9243a21d7d4aa77182176f9c35d1 243 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.1E-31 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01360 ec0d9243a21d7d4aa77182176f9c35d1 243 Pfam PF00460 Flagella basal body rod protein 7 35 1.3E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01360 ec0d9243a21d7d4aa77182176f9c35d1 243 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 169 239 3.5E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A01360 ec0d9243a21d7d4aa77182176f9c35d1 243 SUPERFAMILY SSF117143 77 176 1.02E-12 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 PRINTS PR01008 Flagellar L-ring protein signature 173 189 2.4E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 PRINTS PR01008 Flagellar L-ring protein signature 147 162 2.4E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 PRINTS PR01008 Flagellar L-ring protein signature 210 224 2.4E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 PRINTS PR01008 Flagellar L-ring protein signature 79 91 2.4E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 PRINTS PR01008 Flagellar L-ring protein signature 194 208 2.4E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 Hamap MF_00415 Flagellar L-ring protein [flgH]. 11 231 25.893 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02259 6f4da2361cbfdd0b89d552dc87165037 234 Pfam PF02107 Flagellar L-ring protein 58 232 1.2E-59 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 Gene3D G3DSA:3.30.470.20 1 234 3.8E-92 T 12-10-2018 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 Pfam PF08442 ATP-grasp domain 2 203 2.5E-79 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 SUPERFAMILY SSF56059 1 238 1.0E-79 T 12-10-2018 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 PIRSF PIRSF001554 1 388 2.1E-154 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 3.7E-173 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 Gene3D G3DSA:3.30.1490.20 21 104 3.8E-92 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 Gene3D G3DSA:3.40.50.261 240 388 3.0E-57 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.294 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 SUPERFAMILY SSF52210 240 385 9.94E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A01236 31f859afc9f30d1e330001f80c6c1eea 388 Pfam PF00549 CoA-ligase 262 382 3.5E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 Gene3D G3DSA:2.30.30.20 101 153 1.0E-23 T 12-10-2018 vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 SUPERFAMILY SSF54893 1 100 4.71E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 7.8E-20 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 1.7E-60 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 2.7E-30 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 Gene3D G3DSA:3.30.70.140 1 100 7.8E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 SUPERFAMILY SSF57825 101 151 1.44E-15 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 8.0E-38 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal vfu_A00558 9a92c812388e3aa8bc333ecb0f6e48fd 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.533 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 vfu_B01377 f04fd1bf0a7f7a8fab58bfe2ae07007c 279 Gene3D G3DSA:2.60.120.330 1 279 1.1E-94 T 12-10-2018 IPR027443 Isopenicillin N synthase-like vfu_B01377 f04fd1bf0a7f7a8fab58bfe2ae07007c 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 11 94 1.6E-9 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain vfu_B01377 f04fd1bf0a7f7a8fab58bfe2ae07007c 279 SUPERFAMILY SSF51197 3 276 4.19E-61 T 12-10-2018 vfu_B01377 f04fd1bf0a7f7a8fab58bfe2ae07007c 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 1.4E-15 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 vfu_B00398 fc1c34a02e9ba471668d1373e9279800 154 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 124 2.2E-30 T 12-10-2018 IPR009678 Bacteriophage tail completion protein R vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 732 2.9E-170 T 12-10-2018 vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 Gene3D G3DSA:3.40.710.10 243 364 9.5E-10 T 12-10-2018 vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 Gene3D G3DSA:1.10.3810.10 48 242 1.3E-78 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 SUPERFAMILY SSF56601 211 810 1.51E-114 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 Pfam PF00905 Penicillin binding protein transpeptidase domain 434 698 8.8E-29 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 Pfam PF17092 Penicillin-binding protein OB-like domain 316 431 2.3E-32 T 12-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 Pfam PF00912 Transglycosylase 55 229 3.0E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00628 eaf20020cb3528f955c2aa9d5ccd942b 826 SUPERFAMILY SSF53955 43 255 1.15E-77 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A01304 aa331ac1838440c46a4c996cdaa0b77e 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.057 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A01304 aa331ac1838440c46a4c996cdaa0b77e 56 SUPERFAMILY SSF57829 2 55 2.87E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 vfu_A01304 aa331ac1838440c46a4c996cdaa0b77e 56 Pfam PF01783 Ribosomal L32p protein family 2 56 1.0E-19 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A01304 aa331ac1838440c46a4c996cdaa0b77e 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 5.4E-18 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF52540 6 288 5.18E-108 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 113.537 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF54211 484 604 6.07E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 8.7E-35 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF03764 Elongation factor G, domain IV 484 603 9.4E-48 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.40.50.300 1 298 1.1E-116 T 12-10-2018 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF54980 608 695 1.1E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SMART SM00838 605 693 7.6E-58 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:2.40.30.10 299 405 4.0E-48 T 12-10-2018 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.5E-67 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.30.70.870 410 488 3.1E-32 T 12-10-2018 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF50447 271 409 2.08E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SMART SM00889 485 603 1.6E-75 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF00679 Elongation factor G C-terminus 605 691 8.0E-31 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.30.70.240 609 680 8.3E-91 T 12-10-2018 vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 SUPERFAMILY SSF54980 407 485 8.63E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Gene3D G3DSA:3.30.230.10 489 693 8.3E-91 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A00001 b1eb81abcd11a063e0d965f4ec9c43e7 698 Pfam PF14492 Elongation Factor G, domain II 409 483 1.8E-33 T 12-10-2018 vfu_B00082 bf1433e4931e9232cabad5bbd0797a9b 193 Pfam PF01965 DJ-1/PfpI family 2 168 8.5E-22 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 vfu_B00082 bf1433e4931e9232cabad5bbd0797a9b 193 SUPERFAMILY SSF52317 1 189 6.67E-46 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00082 bf1433e4931e9232cabad5bbd0797a9b 193 Gene3D G3DSA:3.40.50.880 1 193 7.0E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02008 a2c06e7636f3429cffbc46c3dbc669d2 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 6.4E-22 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A02008 a2c06e7636f3429cffbc46c3dbc669d2 365 SUPERFAMILY SSF161098 155 345 5.89E-41 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02008 a2c06e7636f3429cffbc46c3dbc669d2 365 Gene3D G3DSA:1.10.3720.10 145 363 1.9E-49 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02008 a2c06e7636f3429cffbc46c3dbc669d2 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 4.0E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00129 ccdc0d977df0d1dac23056fa7c310493 347 Gene3D G3DSA:1.10.3720.10 132 345 9.9E-17 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00129 ccdc0d977df0d1dac23056fa7c310493 347 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 50 3.2E-8 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain vfu_B00129 ccdc0d977df0d1dac23056fa7c310493 347 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 162 343 1.1E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00129 ccdc0d977df0d1dac23056fa7c310493 347 SUPERFAMILY SSF161098 139 326 5.76E-19 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01473 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF56801 924 1443 6.02E-127 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.30.559.10 1 172 5.4E-34 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_A01473 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.30.559.10 449 627 2.6E-24 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_A01473 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 451 676 7.45E-12 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 Pfam PF00668 Condensation domain 657 897 1.2E-8 T 12-10-2018 IPR001242 Condensation domain vfu_A01473 99c06328f1288ed215d533b953942357 1547 Pfam PF00668 Condensation domain 5 423 2.1E-27 T 12-10-2018 IPR001242 Condensation domain vfu_A01473 99c06328f1288ed215d533b953942357 1547 Pfam PF00668 Condensation domain 485 590 3.2E-7 T 12-10-2018 IPR001242 Condensation domain vfu_A01473 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.30.559.30 662 909 1.0E-33 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.30.559.30 181 428 3.6E-55 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1089 1100 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A01473 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.40.50.12780 940 1338 3.2E-102 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 966 1370 4.7E-109 T 12-10-2018 IPR010071 Amino acid adenylation domain vfu_A01473 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 667 884 2.67E-26 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 Gene3D G3DSA:3.30.300.30 1342 1457 1.4E-20 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 4 174 5.26E-19 T 12-10-2018 vfu_A01473 99c06328f1288ed215d533b953942357 1547 Pfam PF00501 AMP-binding enzyme 951 1346 3.4E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A01473 99c06328f1288ed215d533b953942357 1547 SUPERFAMILY SSF52777 182 426 1.56E-30 T 12-10-2018 vfu_A01016 71f5208bc45af737f4f222139dc43d08 452 SUPERFAMILY SSF51338 2 423 3.7E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A01016 71f5208bc45af737f4f222139dc43d08 452 SUPERFAMILY SSF51556 52 370 1.45E-83 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A01016 71f5208bc45af737f4f222139dc43d08 452 Gene3D G3DSA:3.20.20.140 53 371 8.7E-110 T 12-10-2018 vfu_A01016 71f5208bc45af737f4f222139dc43d08 452 Pfam PF01979 Amidohydrolase family 49 420 2.1E-48 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_A01016 71f5208bc45af737f4f222139dc43d08 452 Gene3D G3DSA:2.30.40.10 18 420 8.7E-110 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 Pfam PF09107 Elongation factor SelB, winged helix 557 597 4.0E-8 T 12-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 Gene3D G3DSA:2.40.30.10 187 294 5.6E-23 T 12-10-2018 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 SUPERFAMILY SSF50447 189 272 1.1E-18 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 SUPERFAMILY SSF46785 552 597 1.64E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 11 593 6.9E-82 T 12-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 Gene3D G3DSA:3.40.50.300 5 176 2.2E-43 T 12-10-2018 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 168 5.8E-18 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 SUPERFAMILY SSF52540 7 174 4.4E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 Pfam PF00009 Elongation factor Tu GTP binding domain 12 173 2.7E-31 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A02063 7d84b57d649deac0d48614f1b6091d2a 603 Gene3D G3DSA:1.10.10.10 542 598 9.3E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 SUPERFAMILY SSF110849 44 132 5.75E-28 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 SUPERFAMILY SSF109709 122 230 8.89E-34 T 12-10-2018 vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 Pfam PF02195 ParB-like nuclease domain 44 130 2.6E-28 T 12-10-2018 IPR003115 ParB/Sulfiredoxin vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 Gene3D G3DSA:1.10.10.2830 117 230 1.7E-35 T 12-10-2018 vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 SMART SM00470 40 130 4.4E-36 T 12-10-2018 IPR003115 ParB/Sulfiredoxin vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 38 214 5.2E-57 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 vfu_A00342 7878bddd878f7dd8f70adfea832e9693 293 Gene3D G3DSA:3.90.1530.30 53 116 6.3E-28 T 12-10-2018 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 Gene3D G3DSA:1.10.1740.10 4 88 7.4E-26 T 12-10-2018 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 SUPERFAMILY SSF88659 162 240 2.62E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 PIRSF PIRSF000770 3 243 4.5E-35 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 8.7E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 Pfam PF04539 Sigma-70 region 3 100 171 2.0E-13 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 62.003 T 12-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 Pfam PF04545 Sigma-70, region 4 187 234 2.3E-19 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 Gene3D G3DSA:1.20.140.160 90 239 9.8E-46 T 12-10-2018 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 SUPERFAMILY SSF88946 6 91 8.9E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 1.1E-84 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 Pfam PF04542 Sigma-70 region 2 20 91 8.5E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 SUPERFAMILY SSF88659 92 164 6.98E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01253 ea807f22b1a0c2280af7d282dbeb5495 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.7E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 PIRSF PIRSF039102 1 334 1.7E-79 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 Pfam PF07478 D-ala D-ala ligase C-terminus 126 323 3.3E-53 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 SUPERFAMILY SSF56059 116 327 9.3E-42 T 12-10-2018 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 Pfam PF01820 D-ala D-ala ligase N-terminus 6 106 9.8E-21 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 32.911 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 SUPERFAMILY SSF52440 3 115 1.63E-27 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_B00227 204f065ea659d81e48847b25f6639b29 334 Gene3D G3DSA:3.30.470.20 105 320 1.6E-82 T 12-10-2018 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 328 1.3E-101 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 Gene3D G3DSA:3.30.1490.20 132 199 1.6E-82 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_B00227 204f065ea659d81e48847b25f6639b29 334 Gene3D G3DSA:3.40.50.20 19 325 1.6E-82 T 12-10-2018 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.420.40 23 374 2.2E-114 T 12-10-2018 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.90.640.10 238 311 2.2E-114 T 12-10-2018 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Pfam PF00012 Hsp70 protein 22 601 2.9E-193 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:3.30.420.40 194 361 2.2E-114 T 12-10-2018 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 4.9E-55 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF100934 504 616 2.75E-35 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.806 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:2.60.34.10 379 519 1.3E-49 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 2.5E-267 T 12-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF53067 200 377 5.18E-50 T 12-10-2018 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF53067 20 196 2.37E-52 T 12-10-2018 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 SUPERFAMILY SSF100920 384 537 7.72E-52 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 vfu_A02783 ed9af551b14181986e7a6925d95cd57b 617 Gene3D G3DSA:1.20.1270.10 520 616 4.5E-28 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.3E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Gene3D G3DSA:3.40.50.1370 135 292 1.3E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.1E-35 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.1E-35 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.1E-35 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.1E-35 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.1E-35 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.1E-35 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 SUPERFAMILY SSF53671 4 306 1.2E-102 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.2E-44 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Gene3D G3DSA:3.40.50.1370 8 304 1.3E-121 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 4.2E-34 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.403 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00750 ffcbbfd6e3c33885b2ef5fc157d6e36c 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 4.3E-116 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00471 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 SMART SM00450 7 102 3.0E-18 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A00471 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 SUPERFAMILY SSF52821 1 105 2.1E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A00471 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 32.233 T 12-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 vfu_A00471 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 Pfam PF00581 Rhodanese-like domain 13 98 7.0E-12 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A00471 5593a44b5cc498cfa1f07f1f2d2a5ce6 106 Gene3D G3DSA:3.40.250.10 1 102 3.0E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B01505 1c439007fbd99a7c38754308c486eaa3 212 SUPERFAMILY SSF69118 6 210 2.55E-42 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B01505 1c439007fbd99a7c38754308c486eaa3 212 Pfam PF02627 Carboxymuconolactone decarboxylase family 124 208 4.3E-13 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B01505 1c439007fbd99a7c38754308c486eaa3 212 Pfam PF02627 Carboxymuconolactone decarboxylase family 6 71 4.3E-7 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B01505 1c439007fbd99a7c38754308c486eaa3 212 Gene3D G3DSA:1.20.1290.10 3 212 8.4E-48 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_A00086 b629f9ffccdef1ea4a8b21bb21098c27 360 SUPERFAMILY SSF54631 181 315 2.59E-23 T 12-10-2018 vfu_A00086 b629f9ffccdef1ea4a8b21bb21098c27 360 Pfam PF00571 CBS domain 264 313 5.2E-5 T 12-10-2018 IPR000644 CBS domain vfu_A00086 b629f9ffccdef1ea4a8b21bb21098c27 360 Pfam PF01595 Domain of unknown function DUF21 9 177 7.8E-29 T 12-10-2018 IPR002550 CNNM, transmembrane domain vfu_A00086 b629f9ffccdef1ea4a8b21bb21098c27 360 Gene3D G3DSA:3.10.580.10 186 315 1.5E-36 T 12-10-2018 vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 Gene3D G3DSA:1.20.1250.20 18 222 5.9E-51 T 12-10-2018 vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 Gene3D G3DSA:1.20.1250.20 238 436 8.7E-45 T 12-10-2018 vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 PIRSF PIRSF002808 6 445 3.7E-147 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 SUPERFAMILY SSF103473 13 430 3.27E-81 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 412 6.4E-139 T 12-10-2018 vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 ProSitePatterns PS00942 glpT family of transporters signature. 150 166 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 vfu_A02668 58304e656ce95b9fa6ec615c6af2d20e 447 Pfam PF07690 Major Facilitator Superfamily 35 395 3.7E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02337 52bc725de355584f939952552e5ead82 796 SMART SM00448 587 701 3.3E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02337 52bc725de355584f939952552e5ead82 796 SMART SM00388 341 406 1.7E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02337 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:3.40.50.2300 581 704 2.2E-32 T 12-10-2018 vfu_A02337 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:1.10.287.130 309 404 8.4E-25 T 12-10-2018 vfu_A02337 52bc725de355584f939952552e5ead82 796 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 454 564 1.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02337 52bc725de355584f939952552e5ead82 796 SUPERFAMILY SSF47384 328 407 3.92E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02337 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02337 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02337 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02337 52bc725de355584f939952552e5ead82 796 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 521 7.0E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02337 52bc725de355584f939952552e5ead82 796 SMART SM00387 453 568 3.0E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02337 52bc725de355584f939952552e5ead82 796 SUPERFAMILY SSF52172 585 714 3.27E-29 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02337 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:3.30.565.10 405 572 6.1E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02337 52bc725de355584f939952552e5ead82 796 SUPERFAMILY SSF55874 395 565 1.24E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02337 52bc725de355584f939952552e5ead82 796 Gene3D G3DSA:3.30.450.20 20 193 1.0E-21 T 12-10-2018 vfu_A02337 52bc725de355584f939952552e5ead82 796 Pfam PF00512 His Kinase A (phospho-acceptor) domain 341 406 2.2E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02337 52bc725de355584f939952552e5ead82 796 Pfam PF00072 Response regulator receiver domain 589 701 1.9E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01066 0b7ac50d83cbbb30dd7b162f93ea70e8 126 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 1.1E-55 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 vfu_A01066 0b7ac50d83cbbb30dd7b162f93ea70e8 126 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 29.307 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 vfu_A01066 0b7ac50d83cbbb30dd7b162f93ea70e8 126 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 9.0E-60 T 12-10-2018 IPR020911 Uncharacterised protein family UPF0325 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Gene3D G3DSA:1.10.560.10 8 521 2.3E-237 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.7E-252 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF54849 137 203 1.6E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Gene3D G3DSA:3.50.7.10 173 379 2.3E-237 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF52029 185 376 1.17E-81 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 1.1E-95 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.438 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 SUPERFAMILY SSF48592 7 521 7.63E-77 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily vfu_A00602 fdd91ecafd8bbbdaadf77f6ec00b23a2 545 Gene3D G3DSA:3.30.260.10 138 410 2.3E-237 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 Gene3D G3DSA:3.30.450.20 266 408 6.7E-24 T 12-10-2018 vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 Pfam PF00990 Diguanylate cyclase, GGDEF domain 415 575 1.6E-51 T 12-10-2018 IPR000160 GGDEF domain vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 SMART SM00091 281 348 0.0052 T 12-10-2018 IPR000014 PAS domain vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 SMART SM00091 38 104 270.0 T 12-10-2018 IPR000014 PAS domain vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 Pfam PF08448 PAS fold 287 397 2.5E-19 T 12-10-2018 IPR013656 PAS fold-4 vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 Pfam PF08448 PAS fold 166 254 2.2E-5 T 12-10-2018 IPR013656 PAS fold-4 vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 SMART SM00267 403 579 1.0E-74 T 12-10-2018 IPR000160 GGDEF domain vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 578 6.5E-49 T 12-10-2018 IPR000160 GGDEF domain vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 278 403 1.1E-12 T 12-10-2018 IPR000014 PAS domain vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 SUPERFAMILY SSF55073 419 578 2.56E-49 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 SUPERFAMILY SSF55785 268 394 2.27E-17 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 Gene3D G3DSA:3.30.70.270 409 580 1.8E-53 T 12-10-2018 vfu_A02904 49537163b68de443f698a9dc9698a9fe 583 SUPERFAMILY SSF55785 163 253 4.54E-6 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A01694 846190efb5b2bbfa2cf3a620440133ff 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 212 7.0E-19 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 vfu_A01694 846190efb5b2bbfa2cf3a620440133ff 310 SUPERFAMILY SSF51735 4 301 3.51E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01694 846190efb5b2bbfa2cf3a620440133ff 310 Gene3D G3DSA:3.40.50.720 3 302 8.5E-30 T 12-10-2018 vfu_A01900 daf0baf7165be79f93e180930d69d933 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 vfu_A01900 daf0baf7165be79f93e180930d69d933 250 SUPERFAMILY SSF46785 165 244 2.54E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01900 daf0baf7165be79f93e180930d69d933 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 2.1E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A01900 daf0baf7165be79f93e180930d69d933 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.6E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A01900 daf0baf7165be79f93e180930d69d933 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.6E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A01900 daf0baf7165be79f93e180930d69d933 250 Gene3D G3DSA:1.10.10.10 165 249 3.0E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01900 daf0baf7165be79f93e180930d69d933 250 SMART SM00100 30 151 1.7E-20 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A01900 daf0baf7165be79f93e180930d69d933 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 6.8E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A01900 daf0baf7165be79f93e180930d69d933 250 SUPERFAMILY SSF51206 23 162 2.49E-31 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A01900 daf0baf7165be79f93e180930d69d933 250 Gene3D G3DSA:2.60.120.10 43 164 7.3E-49 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01900 daf0baf7165be79f93e180930d69d933 250 SMART SM00419 187 235 4.3E-15 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 7.7E-99 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 SUPERFAMILY SSF54814 2 106 1.62E-36 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.966 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 SMART SM00322 60 125 1.7E-7 T 12-10-2018 IPR004087 K Homology domain GO:0003676 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 Pfam PF07650 KH domain 38 111 4.1E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 Gene3D G3DSA:3.30.1140.32 108 208 3.3E-45 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.0E-42 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 Gene3D G3DSA:3.30.300.20 17 107 5.9E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00673 a808b53c6312089d9353babc4e32e8d6 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SUPERFAMILY SSF46689 90 137 1.52E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Pfam PF02805 Metal binding domain of Ada 12 75 5.6E-30 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SMART SM01009 198 311 4.8E-45 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Gene3D G3DSA:3.30.310.20 198 311 5.8E-29 T 12-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Pfam PF12833 Helix-turn-helix domain 110 189 3.0E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SUPERFAMILY SSF55945 199 293 3.61E-28 T 12-10-2018 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SUPERFAMILY SSF48150 301 452 3.14E-29 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SUPERFAMILY SSF46689 142 191 2.51E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SUPERFAMILY SSF57884 5 90 5.49E-34 T 12-10-2018 IPR035451 Ada-like domain superfamily vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 SMART SM00342 104 187 9.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Gene3D G3DSA:1.10.10.60 84 193 2.1E-25 T 12-10-2018 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Pfam PF06029 AlkA N-terminal domain 199 311 8.4E-36 T 12-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 141 183 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Gene3D G3DSA:3.40.10.10 1 77 2.4E-30 T 12-10-2018 IPR035451 Ada-like domain superfamily vfu_B00863 87e3aae7e0d7e8496af1f0daa503a390 454 Gene3D G3DSA:1.10.340.30 312 413 9.7E-19 T 12-10-2018 vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 Gene3D G3DSA:3.30.300.30 497 624 4.6E-24 T 12-10-2018 vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 56 8.4E-12 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 510 589 3.8E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 SUPERFAMILY SSF56801 4 623 3.92E-157 T 12-10-2018 vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 Pfam PF00501 AMP-binding enzyme 65 501 1.7E-84 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A01818 39a771019666a31c67377ec5ce7ead5f 625 Gene3D G3DSA:3.40.50.12780 32 494 2.1E-103 T 12-10-2018 vfu_B01003 5065ae8f0ed84b3acd25a6621f19c94d 104 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 15 88 1.3E-16 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 vfu_B01003 5065ae8f0ed84b3acd25a6621f19c94d 104 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 11 103 4.9E-37 T 12-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 SUPERFAMILY SSF52540 77 347 3.79E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 Gene3D G3DSA:2.40.10.170 2 75 1.5E-26 T 12-10-2018 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 SMART SM00382 142 327 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 SUPERFAMILY SSF50615 2 75 2.35E-23 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 Gene3D G3DSA:3.40.50.300 76 344 1.8E-109 T 12-10-2018 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 459 7.2E-248 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 SUPERFAMILY SSF47917 345 459 3.14E-51 T 12-10-2018 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 9.3E-63 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.1E-16 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 55.446 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 vfu_B01326 6c563fcbf05e6b7d4748e9c1a1398c6a 460 Gene3D G3DSA:1.10.1140.10 345 460 4.9E-54 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 SUPERFAMILY SSF52540 80 361 1.81E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 SMART SM00357 42 108 1.2E-17 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 SMART SM00959 1 37 4.9E-11 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 SMART SM00382 160 345 8.9E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Gene3D G3DSA:1.10.720.10 1 37 1.6E-16 T 12-10-2018 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Gene3D G3DSA:2.40.50.140 38 107 4.6E-35 T 12-10-2018 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 409 247.837 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 407 8.9E-218 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Pfam PF07497 Rho termination factor, RNA-binding domain 42 115 3.5E-32 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Pfam PF07498 Rho termination factor, N-terminal domain 1 37 3.7E-14 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 SUPERFAMILY SSF68912 2 36 1.06E-7 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 353 2.1E-23 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 SUPERFAMILY SSF50249 38 115 4.23E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00058 cfe5cf3edcb44a0f24081d785eda2494 409 Gene3D G3DSA:3.40.50.300 120 407 3.2E-134 T 12-10-2018 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 32 278 5.7E-35 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 SMART SM01064 325 358 7.7E-10 T 12-10-2018 IPR009031 Carbohydrate binding module family 10 GO:0005975|GO:0030248 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 SMART SM01064 361 394 1.3E-10 T 12-10-2018 IPR009031 Carbohydrate binding module family 10 GO:0005975|GO:0030248 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 141 150 - T 12-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 Gene3D G3DSA:2.30.32.30 322 366 7.0E-9 T 12-10-2018 IPR036601 CBM10 superfamily GO:0005975|GO:0030248 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 Gene3D G3DSA:2.30.32.30 367 401 5.8E-6 T 12-10-2018 IPR036601 CBM10 superfamily GO:0005975|GO:0030248 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 SUPERFAMILY SSF51445 21 320 5.81E-71 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 Gene3D G3DSA:3.20.20.80 17 320 1.4E-76 T 12-10-2018 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 SUPERFAMILY SSF57615 323 373 2.48E-6 T 12-10-2018 IPR036601 CBM10 superfamily GO:0005975|GO:0030248 vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 Pfam PF02013 Cellulose or protein binding domain 364 393 1.4E-9 T 12-10-2018 IPR002883 CBM10/dockerin domain vfu_B00526 5e480c4d1d28f020ee374f5e08b31bd2 401 Pfam PF02013 Cellulose or protein binding domain 326 358 6.1E-10 T 12-10-2018 IPR002883 CBM10/dockerin domain vfu_A01599 7a393b09a2c1c2023c23acf296bd5e06 183 Gene3D G3DSA:3.30.70.1560 72 171 5.1E-39 T 12-10-2018 vfu_A01599 7a393b09a2c1c2023c23acf296bd5e06 183 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 12 181 8.4E-57 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A01599 7a393b09a2c1c2023c23acf296bd5e06 183 SUPERFAMILY SSF55120 6 182 9.92E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01599 7a393b09a2c1c2023c23acf296bd5e06 183 Pfam PF00849 RNA pseudouridylate synthase 8 151 1.5E-14 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01599 7a393b09a2c1c2023c23acf296bd5e06 183 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 43 57 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A01599 7a393b09a2c1c2023c23acf296bd5e06 183 Gene3D G3DSA:3.30.70.580 1 71 4.0E-26 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 586 600 3.6E-28 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 742 3.6E-28 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 721 3.6E-28 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 785 804 3.6E-28 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 3.6E-28 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 808 820 3.6E-28 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:2.70.150.20 377 489 1.8E-39 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 588 594 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.40.50.1000 567 837 1.6E-91 T 12-10-2018 IPR023214 HAD superfamily vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.30.70.100 78 134 3.4E-8 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF55008 72 133 1.96E-8 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 ProSitePatterns PS01047 Heavy-metal-associated domain. 169 198 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 583 799 1.2E-39 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 298 895 4.9E-185 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF55008 160 226 5.5E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Pfam PF00403 Heavy-metal-associated domain 169 224 1.7E-11 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Pfam PF00403 Heavy-metal-associated domain 79 132 5.2E-6 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.30.70.100 156 230 3.6E-18 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF56784 584 891 2.06E-56 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Gene3D G3DSA:3.40.1110.10 597 717 1.6E-91 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 Pfam PF00122 E1-E2 ATPase 385 565 7.6E-53 T 12-10-2018 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 356 863 1.5E-90 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF55008 4 67 1.44E-6 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 317 894 7.1E-189 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF81665 353 580 1.57E-6 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 vfu_A00193 d746df88ef166e788c0800990ec3f774 906 SUPERFAMILY SSF81653 389 484 3.66E-28 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 Gene3D G3DSA:3.20.20.450 386 633 8.3E-35 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 SUPERFAMILY SSF141868 416 624 1.57E-37 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 SUPERFAMILY SSF55073 221 373 1.1E-14 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 27 122 8.0E-31 T 12-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 Pfam PF00990 Diguanylate cyclase, GGDEF domain 217 369 4.7E-16 T 12-10-2018 IPR000160 GGDEF domain vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 Gene3D G3DSA:3.30.70.270 199 375 7.8E-18 T 12-10-2018 vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 SMART SM00267 204 374 6.0E-7 T 12-10-2018 IPR000160 GGDEF domain vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 SMART SM00052 385 636 2.5E-16 T 12-10-2018 IPR001633 EAL domain vfu_A03119 3a5015a416e2be5c3012a1f30cabb53a 652 Pfam PF00563 EAL domain 419 624 5.4E-41 T 12-10-2018 IPR001633 EAL domain vfu_B01185 4315c886a1effbea09e66cda861f1865 870 SUPERFAMILY SSF52540 558 839 6.62E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 222 352 4.3E-9 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 769 2.3E-37 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Gene3D G3DSA:1.10.1780.10 5 159 1.3E-37 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 775 850 6.6E-10 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 24 72 5.4E-4 T 12-10-2018 IPR004176 Clp, N-terminal vfu_B01185 4315c886a1effbea09e66cda861f1865 870 SUPERFAMILY SSF81923 12 125 1.28E-12 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 SMART SM01086 775 867 6.5E-7 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Gene3D G3DSA:3.40.50.300 562 773 5.6E-62 T 12-10-2018 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 859 0.0 T 12-10-2018 IPR017729 Type VI secretion system, ATPase ClpV1 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 SMART SM00382 609 757 1.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01185 4315c886a1effbea09e66cda861f1865 870 SMART SM00382 217 363 7.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Gene3D G3DSA:3.40.50.300 362 556 2.3E-46 T 12-10-2018 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Gene3D G3DSA:1.10.8.60 775 869 1.4E-8 T 12-10-2018 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 SUPERFAMILY SSF52540 179 557 3.25E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01185 4315c886a1effbea09e66cda861f1865 870 Gene3D G3DSA:3.40.50.300 169 361 3.2E-59 T 12-10-2018 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 643 661 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 1.4E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 1.4E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 1.4E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_B01185 4315c886a1effbea09e66cda861f1865 870 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 1.4E-28 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 SUPERFAMILY SSF55073 202 362 2.12E-24 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 Gene3D G3DSA:3.20.20.450 375 625 2.0E-72 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 SUPERFAMILY SSF141868 381 625 1.57E-67 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 SMART SM00267 186 360 1.1E-16 T 12-10-2018 IPR000160 GGDEF domain vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 SMART SM00052 373 617 4.5E-76 T 12-10-2018 IPR001633 EAL domain vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 Pfam PF00563 EAL domain 382 612 4.6E-62 T 12-10-2018 IPR001633 EAL domain vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 Pfam PF00990 Diguanylate cyclase, GGDEF domain 197 352 5.8E-24 T 12-10-2018 IPR000160 GGDEF domain vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 Gene3D G3DSA:3.30.70.270 193 374 3.9E-33 T 12-10-2018 vfu_A02447 30fc9893827d707edf41c69f7119ad56 637 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 358 9.2E-22 T 12-10-2018 IPR000160 GGDEF domain vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF54980 402 516 1.77E-27 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:2.40.30.10 203 303 2.1E-33 T 12-10-2018 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF52540 5 211 1.94E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 3.3E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:2.40.50.250 487 603 4.5E-130 T 12-10-2018 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.5E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.1E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF54980 306 391 5.4E-16 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 4.2E-293 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:3.30.70.870 310 594 4.5E-130 T 12-10-2018 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Pfam PF00679 Elongation factor G C-terminus 399 480 1.8E-21 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 SUPERFAMILY SSF50447 155 303 1.19E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:3.30.70.240 393 486 4.5E-130 T 12-10-2018 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Gene3D G3DSA:3.40.50.300 5 202 4.4E-69 T 12-10-2018 vfu_A00499 84890c6dd29eb5c26d6c26ac5e202c79 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.7E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.40.1110.10 611 730 1.3E-93 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.30.70.100 66 125 2.4E-7 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.40.50.1000 581 850 1.3E-93 T 12-10-2018 IPR023214 HAD superfamily vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 583 598 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 871 885 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 832 846 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 316 335 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 388 406 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 521 535 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 775 792 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00943 Copper-transporting ATPase signature 192 206 5.4E-14 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 745 755 2.3E-29 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 600 614 2.3E-29 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 798 817 2.3E-29 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 821 833 2.3E-29 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 462 2.3E-29 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 723 734 2.3E-29 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF81665 356 862 1.83E-11 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Pfam PF00403 Heavy-metal-associated domain 182 238 2.4E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 331 907 2.5E-185 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF56784 598 904 5.34E-58 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:3.30.70.100 176 241 2.7E-19 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 ProSitePatterns PS01047 Heavy-metal-associated domain. 182 211 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 602 608 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF55008 178 244 2.49E-18 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 312 908 1.1E-183 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Pfam PF00122 E1-E2 ATPase 399 579 5.1E-49 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Gene3D G3DSA:2.70.150.20 386 502 1.0E-37 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 ProSitePatterns PS01229 Hypothetical cof family signature 2. 798 820 - T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF55008 66 129 1.83E-7 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 Pfam PF00702 haloacid dehalogenase-like hydrolase 596 812 6.7E-47 T 12-10-2018 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 SUPERFAMILY SSF81653 401 498 3.14E-24 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 vfu_A01108 d5c936e666c79705a1274abf64f555ec 916 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 370 876 4.7E-89 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 Gene3D G3DSA:3.30.420.40 196 396 3.2E-76 T 12-10-2018 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PRINTS PR00471 Acetate kinase family signature 6 17 8.3E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PRINTS PR00471 Acetate kinase family signature 299 312 8.3E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PRINTS PR00471 Acetate kinase family signature 203 224 8.3E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PRINTS PR00471 Acetate kinase family signature 322 338 8.3E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PRINTS PR00471 Acetate kinase family signature 173 186 8.3E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PRINTS PR00471 Acetate kinase family signature 377 389 8.3E-47 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 Gene3D G3DSA:3.30.420.40 3 195 3.4E-67 T 12-10-2018 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 SUPERFAMILY SSF53067 157 395 5.87E-86 T 12-10-2018 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 174.9 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 TIGRFAM TIGR00016 ackA: acetate kinase 2 395 2.3E-149 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 SUPERFAMILY SSF53067 5 195 1.17E-63 T 12-10-2018 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 Pfam PF00871 Acetokinase family 6 390 3.2E-146 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 PIRSF PIRSF000722 2 396 2.5E-137 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00489 a2a7241aa190669063cdaad270cca0c3 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_B00127 eceb471f75aefb990684dabc9e30313a 605 PIRSF PIRSF002741 12 596 7.9E-127 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 vfu_B00127 eceb471f75aefb990684dabc9e30313a 605 SUPERFAMILY SSF53850 51 593 1.54E-116 T 12-10-2018 vfu_B00127 eceb471f75aefb990684dabc9e30313a 605 Gene3D G3DSA:3.10.105.10 313 571 3.0E-224 T 12-10-2018 vfu_B00127 eceb471f75aefb990684dabc9e30313a 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 507 1.3E-80 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_B00127 eceb471f75aefb990684dabc9e30313a 605 Gene3D G3DSA:3.40.190.10 33 591 3.0E-224 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 356 500 6.3E-36 T 12-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 427 443 2.1E-27 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 365 376 2.1E-27 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 310 330 2.1E-27 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 344 360 2.1E-27 T 12-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Gene3D G3DSA:1.10.390.10 358 509 9.5E-50 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 99 2.4E-9 T 12-10-2018 IPR011096 FTP domain vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Gene3D G3DSA:3.10.450.490 30 110 7.4E-9 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Pfam PF03413 Peptidase propeptide and YPEB domain 116 193 2.3E-10 T 12-10-2018 IPR025711 PepSY domain vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Gene3D G3DSA:2.60.120.380 510 608 2.0E-39 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Gene3D G3DSA:3.10.170.10 201 357 9.1E-61 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Gene3D G3DSA:3.10.450.40 111 198 3.1E-26 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 SUPERFAMILY SSF89260 512 607 2.35E-5 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 SUPERFAMILY SSF55486 203 501 2.01E-86 T 12-10-2018 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 210 353 8.0E-36 T 12-10-2018 IPR013856 Peptidase M4 domain GO:0004222 vfu_B00520 e77556d26569dc449e7b3287eb302817 608 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 530 594 8.5E-11 T 12-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial vfu_A01348 9c654f816b9e37571f15e64edb26a260 291 SUPERFAMILY SSF54427 170 290 9.2E-15 T 12-10-2018 IPR032710 NTF2-like domain superfamily vfu_A01348 9c654f816b9e37571f15e64edb26a260 291 Pfam PF04280 Tim44-like domain 169 290 3.2E-14 T 12-10-2018 IPR007379 Tim44-like domain vfu_A01348 9c654f816b9e37571f15e64edb26a260 291 SMART SM00978 160 291 2.6E-30 T 12-10-2018 IPR007379 Tim44-like domain vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 462 1.4E-180 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 SUPERFAMILY SSF52540 184 468 3.0E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Pfam PF01926 50S ribosome-binding GTPase 209 326 2.2E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.7E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 382 461 3.1E-26 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 SMART SM00382 1 173 2.1 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 SMART SM00382 205 348 0.095 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Gene3D G3DSA:3.30.300.20 382 464 2.9E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 PIRSF PIRSF006485 1 470 9.1E-182 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.2E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 SUPERFAMILY SSF52540 4 169 2.12E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Gene3D G3DSA:3.40.50.300 2 160 2.7E-42 T 12-10-2018 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Hamap MF_00195 GTPase Der [der]. 2 465 39.104 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 Gene3D G3DSA:3.40.50.300 200 379 9.3E-50 T 12-10-2018 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 7.3E-21 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A02771 0b2690dbaa2e5a4001228a6c44d884f9 495 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 371 5.0E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_B00639 bd54474b3cec2d054f604e95dd72450d 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 232 1.6E-22 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 vfu_B00639 bd54474b3cec2d054f604e95dd72450d 267 SUPERFAMILY SSF56784 6 264 2.42E-65 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B00639 bd54474b3cec2d054f604e95dd72450d 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 260 1.6E-57 T 12-10-2018 vfu_B00639 bd54474b3cec2d054f604e95dd72450d 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 260 1.1E-50 T 12-10-2018 IPR000150 Cof family GO:0016787 vfu_B00639 bd54474b3cec2d054f604e95dd72450d 267 Gene3D G3DSA:3.40.50.1000 9 260 6.1E-78 T 12-10-2018 IPR023214 HAD superfamily vfu_B00639 bd54474b3cec2d054f604e95dd72450d 267 Gene3D G3DSA:3.30.1240.10 85 190 6.1E-78 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 Pfam PF01497 Periplasmic binding protein 37 273 1.1E-26 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 Gene3D G3DSA:3.40.50.1980 21 120 1.0E-27 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 Gene3D G3DSA:3.40.50.1980 123 297 6.9E-52 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 5.0E-17 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 5.0E-17 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 5.0E-17 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 5.0E-17 T 12-10-2018 vfu_B00457 d0b26f4dd943eaeac40b54fc5e6cab1d 297 SUPERFAMILY SSF53807 32 294 4.32E-57 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 SUPERFAMILY SSF53706 60 647 1.96E-198 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 SMART SM00926 62 116 3.9E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Gene3D G3DSA:3.40.228.10 196 395 1.5E-132 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Gene3D G3DSA:3.40.50.740 127 618 1.5E-132 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 PIRSF PIRSF036643 794 952 5.0E-16 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 PIRSF PIRSF036643 642 679 350.0 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 PIRSF PIRSF036643 26 584 3.1E-113 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Gene3D G3DSA:2.20.25.90 63 115 3.1E-12 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 20 46 1.3E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 63 113 1.7E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Gene3D G3DSA:2.40.40.20 768 952 3.5E-48 T 12-10-2018 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Pfam PF00384 Molybdopterin oxidoreductase 119 569 1.7E-53 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 Pfam PF01568 Molydopterin dinucleotide binding domain 819 945 2.5E-20 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 67 84 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 vfu_A01884 6a94659e36c476530a580ba8d176dd73 952 SUPERFAMILY SSF50692 753 952 1.02E-38 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_A02806 bb00cae83b85c01cb671baaa06526bdc 272 SUPERFAMILY SSF52540 22 258 1.54E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02806 bb00cae83b85c01cb671baaa06526bdc 272 Pfam PF00005 ABC transporter 41 197 9.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02806 bb00cae83b85c01cb671baaa06526bdc 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02806 bb00cae83b85c01cb671baaa06526bdc 272 Gene3D G3DSA:3.40.50.300 24 269 1.1E-64 T 12-10-2018 vfu_A02806 bb00cae83b85c01cb671baaa06526bdc 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 1.4E-122 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 vfu_A02806 bb00cae83b85c01cb671baaa06526bdc 272 SMART SM00382 50 252 2.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 SUPERFAMILY SSF55804 1 145 3.4E-36 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 Gene3D G3DSA:3.40.930.10 1 147 6.8E-40 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 Pfam PF02378 Phosphotransferase system, EIIC 290 566 5.3E-14 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 165 253 3.7E-14 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 8.3E-39 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 163 245 7.7E-28 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 Gene3D G3DSA:3.40.50.2300 150 261 9.8E-37 T 12-10-2018 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 5.2E-87 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 SUPERFAMILY SSF52794 162 257 1.55E-32 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 vfu_A00077 d17e4fa9a0d3394d7f6ac493237fa213 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 146 3.9E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_A03105 57a1d4e51a2658bb14003856375faa6a 234 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03105 57a1d4e51a2658bb14003856375faa6a 234 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 1.1E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03105 57a1d4e51a2658bb14003856375faa6a 234 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.7E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 SUPERFAMILY SSF81338 2 226 1.05E-69 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 5.8E-61 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.7E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.7E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.7E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.7E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.7E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 1.7E-51 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 Gene3D G3DSA:1.20.1080.10 1 230 2.0E-86 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 Pfam PF00230 Major intrinsic protein 2 222 1.7E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.6 T 12-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 vfu_A02542 a0b88d11efb264c37ae9e7ba8ed7dc30 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 Gene3D G3DSA:3.30.390.10 1 105 2.1E-19 T 12-10-2018 IPR029017 Enolase-like, N-terminal vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 SUPERFAMILY SSF51604 120 325 1.26E-51 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 SUPERFAMILY SSF54826 2 114 3.14E-20 T 12-10-2018 vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 SMART SM00922 133 224 1.9E-12 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 174 205 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 Gene3D G3DSA:3.20.20.120 109 328 2.9E-54 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 Pfam PF13378 Enolase C-terminal domain-like 142 296 7.7E-27 T 12-10-2018 IPR029065 Enolase C-terminal domain-like vfu_B00713 1befbfccb0d7890befcc4ccbb945a268 328 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 3 114 1.6E-9 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain vfu_A01823 df3bd5571b564b00c160568f6a8ad0f6 486 Pfam PF00293 NUDIX domain 34 125 8.8E-13 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A01823 df3bd5571b564b00c160568f6a8ad0f6 486 Gene3D G3DSA:3.90.79.10 35 189 9.1E-17 T 12-10-2018 vfu_A01823 df3bd5571b564b00c160568f6a8ad0f6 486 SUPERFAMILY SSF55811 35 159 1.76E-19 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A01823 df3bd5571b564b00c160568f6a8ad0f6 486 SUPERFAMILY SSF48317 168 360 1.8E-8 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily vfu_A01823 df3bd5571b564b00c160568f6a8ad0f6 486 Pfam PF01569 PAP2 superfamily 247 360 5.3E-8 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase vfu_A01823 df3bd5571b564b00c160568f6a8ad0f6 486 ProSitePatterns PS00893 Nudix box signature. 62 83 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 137 8.5E-47 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 1 345 33.58 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 SUPERFAMILY SSF53756 1 345 5.69E-124 T 12-10-2018 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 177 330 1.5E-38 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 Gene3D G3DSA:3.40.50.2000 1 153 1.2E-119 T 12-10-2018 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 Gene3D G3DSA:3.40.50.2000 154 311 1.2E-119 T 12-10-2018 vfu_A02932 2538f0ae28459d8fa6f9f55768a85564 352 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 341 4.8E-115 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02552 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF52096 3 305 8.18E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A02552 979a05940920868571979dd8491522db 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 vfu_A02552 979a05940920868571979dd8491522db 708 Gene3D G3DSA:3.90.226.10 1 303 3.8E-97 T 12-10-2018 vfu_A02552 979a05940920868571979dd8491522db 708 Gene3D G3DSA:3.40.50.720 304 498 7.6E-58 T 12-10-2018 vfu_A02552 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF51735 311 494 2.31E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02552 979a05940920868571979dd8491522db 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 315 494 6.5E-53 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A02552 979a05940920868571979dd8491522db 708 Gene3D G3DSA:1.10.1040.50 499 700 7.9E-72 T 12-10-2018 vfu_A02552 979a05940920868571979dd8491522db 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A02552 979a05940920868571979dd8491522db 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 52.827 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A02552 979a05940920868571979dd8491522db 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 225 3.7E-37 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 vfu_A02552 979a05940920868571979dd8491522db 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 692 2.7E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A02552 979a05940920868571979dd8491522db 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 589 3.7E-24 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A02552 979a05940920868571979dd8491522db 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 12-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A02552 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF48179 496 604 3.49E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A02552 979a05940920868571979dd8491522db 708 SUPERFAMILY SSF48179 612 706 4.68E-26 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00527 906531b61fac73043932ca4d5dba4c2a 424 Gene3D G3DSA:3.40.190.10 61 355 1.0E-52 T 12-10-2018 vfu_B00527 906531b61fac73043932ca4d5dba4c2a 424 Gene3D G3DSA:3.40.190.10 148 365 1.0E-52 T 12-10-2018 vfu_B00527 906531b61fac73043932ca4d5dba4c2a 424 Pfam PF13416 Bacterial extracellular solute-binding protein 58 352 5.7E-23 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_B00527 906531b61fac73043932ca4d5dba4c2a 424 SUPERFAMILY SSF53850 40 419 2.46E-50 T 12-10-2018 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 Pfam PF12833 Helix-turn-helix domain 29 107 3.8E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 Gene3D G3DSA:3.20.80.10 151 299 2.3E-30 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 SUPERFAMILY SSF46689 59 107 2.02E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 SUPERFAMILY SSF46689 6 57 1.08E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 Gene3D G3DSA:1.10.10.60 57 111 9.1E-15 T 12-10-2018 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 SMART SM00871 150 299 3.9E-17 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 SMART SM00342 23 106 1.2E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 Gene3D G3DSA:1.10.10.60 2 56 6.0E-14 T 12-10-2018 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 90 106 5.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 75 90 5.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 Pfam PF06445 GyrI-like small molecule binding domain 152 282 4.0E-21 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain vfu_B00644 f3fabf485fef62ed6cb66c30e80f641a 299 SUPERFAMILY SSF55136 154 298 4.58E-26 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_A00545 c459ac6ff2eae1b9dc6a25088a0cb58a 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-29 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00545 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00545 c459ac6ff2eae1b9dc6a25088a0cb58a 90 SUPERFAMILY SSF63562 1 78 8.89E-26 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 vfu_A00545 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Gene3D G3DSA:3.90.940.10 1 90 1.2E-29 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 vfu_A00545 c459ac6ff2eae1b9dc6a25088a0cb58a 90 Pfam PF01192 RNA polymerase Rpb6 10 60 3.7E-18 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 vfu_A00545 c459ac6ff2eae1b9dc6a25088a0cb58a 90 SMART SM01409 8 61 1.3E-16 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 vfu_B00065 70ee00b441865f6ef3b75b37fa935895 158 Gene3D G3DSA:3.40.50.1000 2 158 1.1E-31 T 12-10-2018 IPR023214 HAD superfamily vfu_B00065 70ee00b441865f6ef3b75b37fa935895 158 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 132 9.3E-12 T 12-10-2018 vfu_B00065 70ee00b441865f6ef3b75b37fa935895 158 SUPERFAMILY SSF56784 4 157 1.78E-24 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A02436 ffe69cdda1041ea0fc11242aa4bd3696 333 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 318 1.7E-106 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_A02436 ffe69cdda1041ea0fc11242aa4bd3696 333 PIRSF PIRSF006470 1 333 8.6E-124 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_A02436 ffe69cdda1041ea0fc11242aa4bd3696 333 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 284 4.7E-81 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_A02436 ffe69cdda1041ea0fc11242aa4bd3696 333 Gene3D G3DSA:3.40.190.170 28 329 1.8E-92 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_B00892 e7266d2e109ee64ac36baa70dab2e4e8 189 Gene3D G3DSA:1.10.3480.10 1 185 2.7E-41 T 12-10-2018 vfu_B00892 e7266d2e109ee64ac36baa70dab2e4e8 189 PIRSF PIRSF004690 1 178 4.9E-38 T 12-10-2018 IPR026269 Tat proofreading chaperone DmsD-type vfu_B00892 e7266d2e109ee64ac36baa70dab2e4e8 189 Pfam PF02613 Nitrate reductase delta subunit 34 141 1.1E-24 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone vfu_B00892 e7266d2e109ee64ac36baa70dab2e4e8 189 SUPERFAMILY SSF89155 2 183 7.06E-44 T 12-10-2018 IPR036411 TorD-like superfamily vfu_B00672 50442a673bbc5a113f87199f921850bd 146 Pfam PF00989 PAS fold 16 134 9.2E-7 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_B00672 50442a673bbc5a113f87199f921850bd 146 SUPERFAMILY SSF55785 10 126 1.33E-10 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00672 50442a673bbc5a113f87199f921850bd 146 Gene3D G3DSA:3.30.450.20 6 140 1.9E-30 T 12-10-2018 vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 SUPERFAMILY SSF51735 124 248 3.1E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 Pfam PF13602 Zinc-binding dehydrogenase 193 314 1.6E-21 T 12-10-2018 vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 Gene3D G3DSA:3.90.180.10 12 312 8.7E-95 T 12-10-2018 vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 Gene3D G3DSA:3.40.50.720 135 265 8.7E-95 T 12-10-2018 vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 94 1.7E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 SUPERFAMILY SSF50129 6 156 2.59E-37 T 12-10-2018 IPR011032 GroES-like superfamily vfu_A02970 3d627d2ec22932493c7db85f8e61ab5c 318 SMART SM00829 14 314 2.6E-14 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 SUPERFAMILY SSF52540 5 226 3.12E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 Pfam PF12704 MacB-like periplasmic core domain 277 494 9.6E-40 T 12-10-2018 IPR025857 MacB-like periplasmic core domain vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 Pfam PF02687 FtsX-like permease family 557 645 6.3E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 Gene3D G3DSA:3.40.50.300 3 270 2.5E-70 T 12-10-2018 vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 SMART SM00382 34 221 6.4E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01775 d49fe76273828a1a24ebfa644dfab7ac 652 Pfam PF00005 ABC transporter 25 173 5.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 SUPERFAMILY SSF161093 280 451 3.66E-44 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF03448 MgtE intracellular N domain 36 137 5.7E-25 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Gene3D G3DSA:3.10.580.10 135 262 1.5E-37 T 12-10-2018 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF00571 CBS domain 213 257 1.7E-4 T 12-10-2018 IPR000644 CBS domain vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF00571 CBS domain 140 196 4.0E-5 T 12-10-2018 IPR000644 CBS domain vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Pfam PF01769 Divalent cation transporter 323 444 7.9E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Gene3D G3DSA:1.10.357.20 277 452 1.5E-45 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 451 4.7E-87 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 SMART SM00924 36 139 5.5E-34 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 SUPERFAMILY SSF54631 138 278 5.56E-29 T 12-10-2018 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 SUPERFAMILY SSF158791 11 136 5.1E-30 T 12-10-2018 vfu_A00728 f1d028ed05d18662a843debbef2ae4f0 452 Gene3D G3DSA:1.25.60.10 8 134 1.1E-19 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily vfu_A00938 575ac661ac94f8998e6730b50f15a5f6 151 SUPERFAMILY SSF74942 84 151 1.57E-16 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily vfu_A00938 575ac661ac94f8998e6730b50f15a5f6 151 Gene3D G3DSA:3.30.300.70 1 80 1.2E-27 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily vfu_A00938 575ac661ac94f8998e6730b50f15a5f6 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 23.845 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 vfu_A00938 575ac661ac94f8998e6730b50f15a5f6 151 Pfam PF02576 RimP N-terminal domain 15 83 5.7E-30 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal vfu_A00938 575ac661ac94f8998e6730b50f15a5f6 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.1E-19 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal vfu_A00938 575ac661ac94f8998e6730b50f15a5f6 151 SUPERFAMILY SSF75420 3 83 1.14E-25 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily vfu_B00465 df5513c03e445e903cac97b204b7b57e 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 103 186 1.7E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00465 df5513c03e445e903cac97b204b7b57e 219 SUPERFAMILY SSF56784 1 212 5.91E-45 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B00465 df5513c03e445e903cac97b204b7b57e 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 185 9.6E-25 T 12-10-2018 vfu_B00465 df5513c03e445e903cac97b204b7b57e 219 Gene3D G3DSA:1.10.150.240 16 86 4.3E-50 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_B00465 df5513c03e445e903cac97b204b7b57e 219 Gene3D G3DSA:3.40.50.1000 6 191 4.3E-50 T 12-10-2018 IPR023214 HAD superfamily vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Gene3D G3DSA:3.40.50.80 262 394 4.1E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 1.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 1.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00410 Phenol hydroxylase reductase family signature 354 362 1.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Pfam PF00175 Oxidoreductase NAD-binding domain 270 367 1.9E-11 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Pfam PF00042 Globin 7 102 1.9E-13 T 12-10-2018 IPR000971 Globin GO:0020037 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 SUPERFAMILY SSF52343 250 384 1.44E-28 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 SUPERFAMILY SSF46458 1 144 3.16E-39 T 12-10-2018 IPR009050 Globin-like superfamily vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Hamap MF_01252 Flavohemoprotein [hmp]. 1 392 51.272 T 12-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 SUPERFAMILY SSF63380 151 261 1.7E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Pfam PF00970 Oxidoreductase FAD-binding domain 159 261 5.7E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Gene3D G3DSA:2.40.30.10 152 261 6.7E-33 T 12-10-2018 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 269 288 6.7E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 6.7E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 354 362 6.7E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 6.7E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 6.7E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B00682 d0f0fc20537963beaaa4e4506033e7b6 394 Gene3D G3DSA:1.10.490.10 1 144 1.7E-52 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 vfu_A02172 e96e6440f0825c1574c465983d0877da 425 SUPERFAMILY SSF51905 6 313 3.11E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02172 e96e6440f0825c1574c465983d0877da 425 Gene3D G3DSA:3.50.50.60 29 381 1.4E-68 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02172 e96e6440f0825c1574c465983d0877da 425 Gene3D G3DSA:3.30.9.10 122 342 1.4E-68 T 12-10-2018 vfu_A02172 e96e6440f0825c1574c465983d0877da 425 Pfam PF01266 FAD dependent oxidoreductase 29 379 6.2E-53 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_A00536 65fc85a7f9c12f5f3c80dbffd5db6668 201 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 4 200 4.4E-84 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A00536 65fc85a7f9c12f5f3c80dbffd5db6668 201 Pfam PF01081 KDPG and KHG aldolase 4 197 4.5E-74 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A00536 65fc85a7f9c12f5f3c80dbffd5db6668 201 Gene3D G3DSA:3.20.20.70 1 201 1.5E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00536 65fc85a7f9c12f5f3c80dbffd5db6668 201 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A00536 65fc85a7f9c12f5f3c80dbffd5db6668 201 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A00536 65fc85a7f9c12f5f3c80dbffd5db6668 201 SUPERFAMILY SSF51569 2 200 2.01E-67 T 12-10-2018 vfu_A02105 ac81cd23045ea9cb186cb9220c2268af 251 SUPERFAMILY SSF52540 16 229 5.33E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02105 ac81cd23045ea9cb186cb9220c2268af 251 SMART SM00382 22 219 3.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02105 ac81cd23045ea9cb186cb9220c2268af 251 Gene3D G3DSA:3.40.50.300 4 250 6.2E-56 T 12-10-2018 vfu_A02105 ac81cd23045ea9cb186cb9220c2268af 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 44.125 T 12-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 vfu_A02105 ac81cd23045ea9cb186cb9220c2268af 251 Pfam PF00005 ABC transporter 15 164 1.1E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 Gene3D G3DSA:3.30.420.10 1 198 4.0E-71 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 SUPERFAMILY SSF53098 6 471 4.14E-136 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 Pfam PF08411 Exonuclease C-terminal 209 469 3.2E-104 T 12-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 Pfam PF00929 Exonuclease 10 190 1.0E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 Gene3D G3DSA:2.30.30.450 211 350 1.5E-54 T 12-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 Gene3D G3DSA:1.20.1280.70 357 418 7.7E-28 T 12-10-2018 vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 PIRSF PIRSF000977 1 473 6.3E-197 T 12-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 vfu_A02120 d4a18427f78278ca64757ae9142bf86a 473 SMART SM00479 7 200 0.0089 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF50341 618 752 3.53E-29 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF01584 CheW-like domain 625 754 4.2E-22 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:1.20.120.160 2 145 1.5E-36 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:2.30.30.40 619 748 1.7E-34 T 12-10-2018 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM01231 371 431 1.7E-17 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM00073 6 103 2.7E-18 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM00260 611 752 1.0E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF47226 6 128 9.81E-32 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:3.30.565.10 432 618 5.1E-56 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 618 3.6E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 597 1.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 1.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 1.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 616 1.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SMART SM00387 476 619 6.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:1.10.287.560 372 431 2.2E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF47384 373 432 6.28E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 372 431 3.0E-12 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Gene3D G3DSA:2.40.50.180 642 707 1.7E-34 T 12-10-2018 vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 SUPERFAMILY SSF55874 434 617 5.63E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01256 2d7d400aa30c897911e7c8db8edc4778 761 Pfam PF01627 Hpt domain 8 100 5.3E-18 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A02474 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:3.30.300.310 458 558 5.0E-29 T 12-10-2018 vfu_A02474 3a8abbe00c0584994013eeb0aba4cbfe 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.7E-16 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A02474 3a8abbe00c0584994013eeb0aba4cbfe 565 Pfam PF00501 AMP-binding enzyme 29 461 1.1E-106 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A02474 3a8abbe00c0584994013eeb0aba4cbfe 565 Gene3D G3DSA:3.40.50.12780 9 457 4.7E-117 T 12-10-2018 vfu_A02474 3a8abbe00c0584994013eeb0aba4cbfe 565 SUPERFAMILY SSF56801 13 553 2.09E-148 T 12-10-2018 vfu_A02474 3a8abbe00c0584994013eeb0aba4cbfe 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_B00783 446f0b6200558fe598cd8a6e7d17ebc8 171 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 11 156 4.8E-28 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN vfu_B00783 446f0b6200558fe598cd8a6e7d17ebc8 171 Gene3D G3DSA:2.60.40.4150 31 164 3.2E-28 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily vfu_B00783 446f0b6200558fe598cd8a6e7d17ebc8 171 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 154 1.1E-31 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN vfu_A01278 ef75f1e25f51a0c013326ff158fb45aa 55 SUPERFAMILY SSF54593 2 53 1.69E-8 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01278 ef75f1e25f51a0c013326ff158fb45aa 55 Gene3D G3DSA:3.10.180.10 1 55 1.5E-10 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 Pfam PF00005 ABC transporter 276 430 1.5E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 SUPERFAMILY SSF52540 8 231 3.48E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 SUPERFAMILY SSF52540 244 491 8.62E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 Gene3D G3DSA:3.40.50.300 1 245 2.7E-55 T 12-10-2018 vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 SMART SM00382 34 229 4.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 SMART SM00382 284 479 2.6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 Gene3D G3DSA:3.40.50.300 258 498 7.3E-39 T 12-10-2018 vfu_A01804 82a39827b3cd67ecd977c9c09431d8cc 502 Pfam PF00005 ABC transporter 25 174 5.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01153 c8ec0be3046b34e2b71c8150e7c193b9 219 Gene3D G3DSA:3.40.50.1000 6 216 2.8E-58 T 12-10-2018 IPR023214 HAD superfamily vfu_B01153 c8ec0be3046b34e2b71c8150e7c193b9 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 6.0E-28 T 12-10-2018 vfu_B01153 c8ec0be3046b34e2b71c8150e7c193b9 219 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 203 1.4E-51 T 12-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like vfu_B01153 c8ec0be3046b34e2b71c8150e7c193b9 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 188 1.3E-29 T 12-10-2018 vfu_B01153 c8ec0be3046b34e2b71c8150e7c193b9 219 Gene3D G3DSA:1.20.1440.100 17 90 2.8E-58 T 12-10-2018 vfu_B01153 c8ec0be3046b34e2b71c8150e7c193b9 219 SUPERFAMILY SSF56784 4 209 1.08E-29 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SUPERFAMILY SSF50692 1210 1365 8.14E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:2.40.40.20 1244 1365 1.4E-41 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:1.10.1060.10 58 184 2.6E-27 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:3.40.50.740 751 1213 1.4E-178 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 189 485 3.2E-28 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SUPERFAMILY SSF53706 687 1224 6.94E-206 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SUPERFAMILY SSF46548 87 198 6.8E-18 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF12838 4Fe-4S dicluster domain 616 672 1.9E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:3.50.50.60 185 292 1.3E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 689 742 1.8E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 692 1361 2.5E-246 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SUPERFAMILY SSF54862 563 679 1.99E-22 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 74 1.6E-9 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1292 1319 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 ProSitePatterns PS00028 Zinc finger C2H2 type domain signature. 617 637 - T 12-10-2018 IPR013087 Zinc finger C2H2-type GO:0003676 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:2.20.25.90 687 743 9.7E-20 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SUPERFAMILY SSF51971 187 428 5.71E-59 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:3.30.70.20 596 676 3.0E-21 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF00384 Molybdopterin oxidoreductase 746 1171 1.3E-92 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:3.40.228.10 824 1024 1.4E-178 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 PRINTS PR00419 Adrenodoxin reductase family signature 213 226 1.7E-15 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 PRINTS PR00419 Adrenodoxin reductase family signature 321 335 1.7E-15 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 PRINTS PR00419 Adrenodoxin reductase family signature 190 212 1.7E-15 T 12-10-2018 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 692 710 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF01568 Molydopterin dinucleotide binding domain 1254 1357 6.9E-29 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Gene3D G3DSA:3.50.50.60 293 428 1.5E-38 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SUPERFAMILY SSF54292 2 97 1.36E-21 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 658 669 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 95 176 5.7E-20 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1117 1134 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 vfu_B01035 97c16c521f2161ec73c086a0ae48e7fc 1376 SMART SM00926 687 743 4.9E-20 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A00577 81af3bc4499956d2e51c75fc380c2637 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 4.8E-129 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 vfu_A00577 81af3bc4499956d2e51c75fc380c2637 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 6.4E-166 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 vfu_A00577 81af3bc4499956d2e51c75fc380c2637 335 PIRSF PIRSF004532 1 331 1.7E-134 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 vfu_A00577 81af3bc4499956d2e51c75fc380c2637 335 Gene3D G3DSA:3.30.540.10 7 319 1.1E-125 T 12-10-2018 vfu_A00577 81af3bc4499956d2e51c75fc380c2637 335 Gene3D G3DSA:3.40.190.90 109 276 1.1E-125 T 12-10-2018 vfu_A00577 81af3bc4499956d2e51c75fc380c2637 335 SUPERFAMILY SSF56655 1 324 6.1E-106 T 12-10-2018 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 SUPERFAMILY SSF52016 418 598 4.0E-54 T 12-10-2018 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 Pfam PF00920 Dehydratase family 67 594 3.4E-148 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.36 T 12-10-2018 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 Gene3D G3DSA:3.50.30.80 418 564 8.1E-51 T 12-10-2018 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 SUPERFAMILY SSF143975 4 417 1.31E-128 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00533 9f63d31a280a817672eec97ffb5821fe 601 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 597 3.7E-248 T 12-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 SMART SM00863 166 208 6.8E-8 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 SUPERFAMILY SSF50447 3 83 1.02E-14 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 Gene3D G3DSA:2.40.30.130 1 83 1.5E-15 T 12-10-2018 vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 Pfam PF01411 tRNA synthetases class II (A) 15 86 1.0E-8 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 Gene3D G3DSA:3.30.980.10 84 212 4.4E-28 T 12-10-2018 vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 SUPERFAMILY SSF55186 84 210 2.75E-28 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 vfu_B00076 b2fbf64e3959b282b760b7ca3c4606bd 212 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 177 208 9.5E-6 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 vfu_A00741 901db10550a89275f54493b3b93069c2 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 10 261 6.0E-98 T 12-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria vfu_A00741 901db10550a89275f54493b3b93069c2 263 Pfam PF02405 Permease MlaE 48 259 1.8E-74 T 12-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 vfu_A00089 b1154c87001e6f62483c7f8d13a48ded 308 SUPERFAMILY SSF51735 93 274 1.51E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00089 b1154c87001e6f62483c7f8d13a48ded 308 Gene3D G3DSA:3.40.50.720 34 300 8.6E-91 T 12-10-2018 vfu_A00089 b1154c87001e6f62483c7f8d13a48ded 308 Gene3D G3DSA:3.40.50.720 92 277 8.6E-91 T 12-10-2018 vfu_A00089 b1154c87001e6f62483c7f8d13a48ded 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 5.7E-42 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_A00089 b1154c87001e6f62483c7f8d13a48ded 308 SUPERFAMILY SSF52283 27 106 3.29E-7 T 12-10-2018 vfu_B01484 7248e50719ecca4760b02065e5b6f0d8 484 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 5 475 3.7E-209 T 12-10-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0036376 vfu_B01484 7248e50719ecca4760b02065e5b6f0d8 484 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site vfu_B01484 7248e50719ecca4760b02065e5b6f0d8 484 Gene3D G3DSA:1.20.1730.10 23 483 2.1E-87 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_B01484 7248e50719ecca4760b02065e5b6f0d8 484 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 436 4.2E-100 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_B01484 7248e50719ecca4760b02065e5b6f0d8 484 Pfam PF00474 Sodium:solute symporter family 36 436 1.0E-119 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 Pfam PF02954 Bacterial regulatory protein, Fis family 295 328 7.0E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 Gene3D G3DSA:1.10.8.60 177 261 1.0E-26 T 12-10-2018 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 SMART SM00382 25 177 2.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 Gene3D G3DSA:1.10.10.60 274 337 4.0E-6 T 12-10-2018 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 Gene3D G3DSA:3.40.50.300 1 176 4.8E-59 T 12-10-2018 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 SUPERFAMILY SSF52540 4 239 3.5E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 Pfam PF00158 Sigma-54 interaction domain 5 168 1.2E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 SUPERFAMILY SSF46689 282 336 1.97E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 334 1.1E-162 T 12-10-2018 IPR014317 Transcription activator PspF vfu_A01660 b45e85db3f0610e01d2c4cd4686cbc9f 342 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 Gene3D G3DSA:3.30.70.1630 29 190 1.9E-39 T 12-10-2018 vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 184 248 3.9E-24 T 12-10-2018 IPR017703 YgfZ/GcvT conserved site vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 SUPERFAMILY SSF101790 240 324 5.04E-20 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 Gene3D G3DSA:2.40.30.160 193 315 8.0E-33 T 12-10-2018 vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 Gene3D G3DSA:3.30.70.1400 32 118 1.9E-39 T 12-10-2018 vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 4 320 43.278 T 12-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 vfu_A00826 f80ef00bf824598c5c815ca10fd1a98b 326 SUPERFAMILY SSF103025 19 238 1.29E-54 T 12-10-2018 vfu_B00834 8009a402a16eeee9e7ee42d1a0008311 308 Gene3D G3DSA:1.10.10.10 3 90 5.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00834 8009a402a16eeee9e7ee42d1a0008311 308 SUPERFAMILY SSF53850 88 296 4.16E-48 T 12-10-2018 vfu_B00834 8009a402a16eeee9e7ee42d1a0008311 308 SUPERFAMILY SSF46785 4 85 1.39E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00834 8009a402a16eeee9e7ee42d1a0008311 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.7E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00834 8009a402a16eeee9e7ee42d1a0008311 308 Gene3D G3DSA:3.40.190.290 91 294 2.6E-68 T 12-10-2018 vfu_B00834 8009a402a16eeee9e7ee42d1a0008311 308 Pfam PF03466 LysR substrate binding domain 88 292 6.0E-45 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00883 acdd8d9df4bf20170789906ca9186c10 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00883 acdd8d9df4bf20170789906ca9186c10 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00883 acdd8d9df4bf20170789906ca9186c10 205 SUPERFAMILY SSF48498 90 198 2.15E-11 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A00883 acdd8d9df4bf20170789906ca9186c10 205 Gene3D G3DSA:1.10.357.10 1 203 1.5E-81 T 12-10-2018 vfu_A00883 acdd8d9df4bf20170789906ca9186c10 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 9.7E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00883 acdd8d9df4bf20170789906ca9186c10 205 SUPERFAMILY SSF46689 9 85 1.8E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 1.5E-61 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF54980 401 478 6.47E-21 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A02872 10f867742c760b6caac1b86325a9736e 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.7E-29 T 12-10-2018 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.441 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 8.6E-290 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.30.230.10 481 684 6.7E-83 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.30.70.240 601 671 6.7E-83 T 12-10-2018 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 175 5.9E-25 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF52540 3 278 6.25E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SMART SM00889 477 595 6.5E-62 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF54211 476 595 1.95E-39 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Pfam PF03764 Elongation factor G, domain IV 476 594 8.8E-44 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.40.50.300 1 290 1.3E-101 T 12-10-2018 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:2.40.30.10 292 413 1.2E-42 T 12-10-2018 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SMART SM00838 597 684 3.1E-46 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 1.1E-15 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF50447 261 399 3.53E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Pfam PF00679 Elongation factor G C-terminus 597 683 5.6E-28 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A02872 10f867742c760b6caac1b86325a9736e 695 SUPERFAMILY SSF54980 600 689 6.12E-28 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A02872 10f867742c760b6caac1b86325a9736e 695 Gene3D G3DSA:3.30.70.870 430 480 2.0E-20 T 12-10-2018 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A02872 10f867742c760b6caac1b86325a9736e 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A01246 edf447a421156547335d21b05850d749 577 SMART SM01016 5 87 7.6E-29 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A01246 edf447a421156547335d21b05850d749 577 SUPERFAMILY SSF55190 2 101 3.27E-22 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 SUPERFAMILY SSF47323 455 577 3.47E-35 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01246 edf447a421156547335d21b05850d749 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 8.7E-200 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 Gene3D G3DSA:3.30.1360.70 1 106 6.4E-34 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01246 edf447a421156547335d21b05850d749 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.5E-20 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A01246 edf447a421156547335d21b05850d749 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 4.3E-161 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 SUPERFAMILY SSF52374 111 455 8.28E-96 T 12-10-2018 vfu_A01246 edf447a421156547335d21b05850d749 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.223 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 vfu_A01246 edf447a421156547335d21b05850d749 577 Pfam PF05746 DALR anticodon binding domain 461 577 5.1E-36 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 vfu_A01246 edf447a421156547335d21b05850d749 577 Gene3D G3DSA:1.10.730.10 455 577 3.6E-36 T 12-10-2018 vfu_A01246 edf447a421156547335d21b05850d749 577 Gene3D G3DSA:3.40.50.620 108 454 1.5E-109 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01246 edf447a421156547335d21b05850d749 577 SMART SM00836 461 577 1.5E-41 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 vfu_B01241 5a0114f8e8dc0c2bc5253102848b82b6 299 SUPERFAMILY SSF53474 69 294 1.54E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B01241 5a0114f8e8dc0c2bc5253102848b82b6 299 Gene3D G3DSA:3.40.50.1820 50 298 1.4E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B01241 5a0114f8e8dc0c2bc5253102848b82b6 299 Pfam PF00326 Prolyl oligopeptidase family 124 281 3.5E-9 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 vfu_A00885 e2e3f63183fd80ddc1e42ada63d30b69 175 SUPERFAMILY SSF53271 3 173 3.93E-54 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A00885 e2e3f63183fd80ddc1e42ada63d30b69 175 Gene3D G3DSA:3.40.50.2020 1 174 7.2E-65 T 12-10-2018 vfu_A00885 e2e3f63183fd80ddc1e42ada63d30b69 175 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 4.7E-72 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 vfu_A00885 e2e3f63183fd80ddc1e42ada63d30b69 175 Pfam PF00156 Phosphoribosyl transferase domain 12 159 5.7E-26 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 491 3.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 Pfam PF00672 HAMP domain 197 244 2.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 172 192 7.0E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 10 7.0E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 7.0E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 7.0E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 Gene3D G3DSA:1.10.287.950 196 525 1.7E-72 T 12-10-2018 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 SMART SM00283 263 524 1.2E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 SUPERFAMILY SSF58104 216 525 8.37E-69 T 12-10-2018 vfu_B00809 0004f4fd09bc883dcd45bf956d6227f6 525 SMART SM00304 196 248 7.1E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:4.10.450.10 38 198 6.9E-177 T 12-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Pfam PF05199 GMC oxidoreductase 388 526 6.3E-40 T 12-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 536 6.3E-241 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 SUPERFAMILY SSF54373 292 474 2.55E-61 T 12-10-2018 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 553 60.563 T 12-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Pfam PF00732 GMC oxidoreductase 5 297 1.5E-91 T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 PIRSF PIRSF000137 1 537 9.3E-146 T 12-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:3.50.50.60 5 530 6.9E-177 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:1.10.1220.110 97 150 6.9E-177 T 12-10-2018 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 Gene3D G3DSA:3.30.410.40 151 471 6.9E-177 T 12-10-2018 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 SUPERFAMILY SSF51905 1 534 1.58E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 vfu_A00378 2a8fffcdae9b5631c8fa13db110939ac 573 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 12-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 SUPERFAMILY SSF51905 163 347 3.94E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 2.1E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 9.5E-14 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 9.5E-14 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 9.5E-14 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.5E-14 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-7 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-7 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-7 T 12-10-2018 vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 SUPERFAMILY SSF51905 3 219 8.27E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02398 f2018acbcfb519b58b4812c97e99f648 429 Gene3D G3DSA:3.50.50.100 1 406 1.3E-116 T 12-10-2018 vfu_A02445 8947ec606106cc8f962ff8d0b912f7de 509 SUPERFAMILY SSF55729 5 139 8.58E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A02445 8947ec606106cc8f962ff8d0b912f7de 509 Pfam PF00795 Carbon-nitrogen hydrolase 226 485 1.5E-31 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 vfu_A02445 8947ec606106cc8f962ff8d0b912f7de 509 Pfam PF00583 Acetyltransferase (GNAT) family 48 136 1.3E-6 T 12-10-2018 IPR000182 GNAT domain vfu_A02445 8947ec606106cc8f962ff8d0b912f7de 509 Gene3D G3DSA:3.40.630.30 4 221 1.1E-47 T 12-10-2018 vfu_A02445 8947ec606106cc8f962ff8d0b912f7de 509 SUPERFAMILY SSF56317 222 491 2.62E-58 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A02445 8947ec606106cc8f962ff8d0b912f7de 509 Gene3D G3DSA:3.60.110.10 222 506 1.0E-58 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A03078 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.8E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.8E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.8E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.8E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 SUPERFAMILY SSF82051 2 157 2.49E-54 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily vfu_A03078 c66017f7c0a6e212963d717815649134 392 Gene3D G3DSA:3.40.50.300 159 335 5.9E-51 T 12-10-2018 vfu_A03078 c66017f7c0a6e212963d717815649134 392 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.1E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 Gene3D G3DSA:2.70.210.12 1 158 7.6E-58 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily vfu_A03078 c66017f7c0a6e212963d717815649134 392 SUPERFAMILY SSF52540 151 335 2.94E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03078 c66017f7c0a6e212963d717815649134 392 Pfam PF01018 GTP1/OBG 4 156 6.2E-55 T 12-10-2018 IPR006169 GTP1/OBG domain vfu_A03078 c66017f7c0a6e212963d717815649134 392 PIRSF PIRSF002401 1 375 2.6E-135 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type vfu_A03078 c66017f7c0a6e212963d717815649134 392 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.9E-141 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 vfu_A03078 c66017f7c0a6e212963d717815649134 392 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.696 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 SUPERFAMILY SSF52374 15 175 8.16E-34 T 12-10-2018 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 SMART SM00904 183 307 9.5E-63 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 Gene3D G3DSA:2.40.30.30 188 310 1.9E-39 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 5.5E-104 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 Pfam PF01687 Riboflavin kinase 184 306 2.4E-38 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 SUPERFAMILY SSF82114 175 308 2.09E-44 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 Pfam PF06574 FAD synthetase 12 167 2.5E-57 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 PIRSF PIRSF004491 1 311 7.5E-106 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 vfu_A00980 9815b20ea0d6558487937cb8b2acb924 311 Gene3D G3DSA:3.40.50.620 1 187 9.8E-61 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Pfam PF00158 Sigma-54 interaction domain 342 497 8.5E-31 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Gene3D G3DSA:1.10.10.60 591 634 2.4E-11 T 12-10-2018 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Pfam PF02954 Bacterial regulatory protein, Fis family 591 632 1.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Gene3D G3DSA:3.30.450.40 18 202 1.0E-45 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 418 433 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 SUPERFAMILY SSF52540 342 574 1.64E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Gene3D G3DSA:3.40.50.300 328 503 5.8E-40 T 12-10-2018 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Gene3D G3DSA:1.10.8.60 504 579 4.3E-16 T 12-10-2018 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 362 375 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 SUPERFAMILY SSF46689 573 634 4.3E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Gene3D G3DSA:3.30.450.20 226 327 6.2E-19 T 12-10-2018 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 Pfam PF00989 PAS fold 220 315 1.2E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_B00881 6ab3210c9e163b1a21de21bef9688242 642 SUPERFAMILY SSF55785 220 307 6.85E-7 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00733 16db9442245f1d5c400598c62ca86f26 172 Gene3D G3DSA:1.10.357.10 2 171 6.4E-25 T 12-10-2018 vfu_B00733 16db9442245f1d5c400598c62ca86f26 172 SUPERFAMILY SSF46689 3 72 7.48E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00733 16db9442245f1d5c400598c62ca86f26 172 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.6E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00733 16db9442245f1d5c400598c62ca86f26 172 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00733 16db9442245f1d5c400598c62ca86f26 172 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00733 16db9442245f1d5c400598c62ca86f26 172 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 SUPERFAMILY SSF52540 160 288 6.76E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Gene3D G3DSA:3.40.630.30 344 545 3.5E-65 T 12-10-2018 vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Pfam PF08351 Domain of unknown function (DUF1726) 71 120 4.4E-5 T 12-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Gene3D G3DSA:3.40.50.12320 181 339 5.6E-47 T 12-10-2018 vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Pfam PF13718 GNAT acetyltransferase 2 501 546 2.3E-8 T 12-10-2018 IPR000182 GNAT domain vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Pfam PF13718 GNAT acetyltransferase 2 384 495 2.2E-17 T 12-10-2018 IPR000182 GNAT domain vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 SUPERFAMILY SSF55729 379 528 1.46E-10 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 23 675 41.607 T 12-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Gene3D G3DSA:3.40.50.11040 8 142 2.4E-16 T 12-10-2018 vfu_B00986 1f06b96f4d2daba73707194c06d5f649 681 Pfam PF05127 Helicase 183 349 3.7E-57 T 12-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 vfu_B01400 09e5f100a2d82e8043b62c8701a87f22 334 PIRSF PIRSF017617 1 334 5.7E-134 T 12-10-2018 IPR023603 Threonine aldolase vfu_B01400 09e5f100a2d82e8043b62c8701a87f22 334 Gene3D G3DSA:3.90.1150.10 244 334 1.4E-24 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01400 09e5f100a2d82e8043b62c8701a87f22 334 Gene3D G3DSA:3.40.640.10 1 243 6.3E-95 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B01400 09e5f100a2d82e8043b62c8701a87f22 334 Pfam PF01212 Beta-eliminating lyase 2 283 6.9E-99 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 vfu_B01400 09e5f100a2d82e8043b62c8701a87f22 334 SUPERFAMILY SSF53383 1 332 1.97E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:3.30.450.40 178 340 2.2E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 387 400 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:1.10.8.60 534 600 5.9E-26 T 12-10-2018 vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:1.10.10.60 622 681 2.4E-7 T 12-10-2018 vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 Pfam PF00158 Sigma-54 interaction domain 363 529 2.5E-67 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 SUPERFAMILY SSF55781 256 333 4.58E-7 T 12-10-2018 vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 SUPERFAMILY SSF52540 362 600 2.56E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 SMART SM00382 383 537 1.7E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 576 585 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A02051 ed13161e0f948a756b4a57df1d671f83 685 Gene3D G3DSA:3.40.50.300 351 533 1.8E-61 T 12-10-2018 vfu_B00210 58a8ec618f57cd6ca9139778eafe82fd 778 SUPERFAMILY SSF52540 31 616 9.24E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00210 58a8ec618f57cd6ca9139778eafe82fd 778 Pfam PF13166 AAA domain 40 749 5.1E-169 T 12-10-2018 IPR026866 Protein CR006, P-loop domain vfu_B00210 58a8ec618f57cd6ca9139778eafe82fd 778 Gene3D G3DSA:3.40.50.300 278 648 1.6E-14 T 12-10-2018 vfu_B00210 58a8ec618f57cd6ca9139778eafe82fd 778 Gene3D G3DSA:3.40.50.300 31 224 4.2E-5 T 12-10-2018 vfu_A01605 c881c48fef4795e8ae3b62f1c0540fb3 80 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 1 75 24.258 T 12-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS vfu_A01605 c881c48fef4795e8ae3b62f1c0540fb3 80 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 1 76 4.7E-32 T 12-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 vfu_A01605 c881c48fef4795e8ae3b62f1c0540fb3 80 SUPERFAMILY SSF54736 1 79 1.99E-30 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like vfu_A01605 c881c48fef4795e8ae3b62f1c0540fb3 80 Gene3D G3DSA:3.30.1390.10 1 80 1.6E-38 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like vfu_A01945 4a9ad1d46d3c0dc3490591f027aec0c2 160 Pfam PF14539 Domain of unknown function (DUF4442) 17 105 6.8E-7 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 vfu_A01945 4a9ad1d46d3c0dc3490591f027aec0c2 160 Gene3D G3DSA:3.10.129.10 5 147 3.0E-24 T 12-10-2018 vfu_A01945 4a9ad1d46d3c0dc3490591f027aec0c2 160 SUPERFAMILY SSF54637 12 156 2.72E-14 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 1 316 1.6E-120 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 Gene3D G3DSA:3.40.1690.10 181 322 9.1E-57 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 191 208 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 235 250 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 265 286 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 171 189 6.5E-28 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 Pfam PF01312 FlhB HrpN YscU SpaS Family 1 310 4.3E-106 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01203 c693a0a121ab49898a116cb28f49f267 339 SUPERFAMILY SSF160544 213 318 1.06E-39 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal vfu_A00111 199fce5b37bc9035fa0c9f3f021e4b3f 263 Gene3D G3DSA:3.90.550.10 1 261 1.1E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00111 199fce5b37bc9035fa0c9f3f021e4b3f 263 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 1 254 8.9E-130 T 12-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 vfu_A00111 199fce5b37bc9035fa0c9f3f021e4b3f 263 Pfam PF00483 Nucleotidyl transferase 1 206 6.2E-54 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 vfu_A00111 199fce5b37bc9035fa0c9f3f021e4b3f 263 SUPERFAMILY SSF53448 1 255 2.09E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01575 21d5f5a08e43e6a4bf14b043d2026ee3 139 SUPERFAMILY SSF54427 5 131 5.32E-25 T 12-10-2018 IPR032710 NTF2-like domain superfamily vfu_A01575 21d5f5a08e43e6a4bf14b043d2026ee3 139 Gene3D G3DSA:3.10.450.50 4 126 6.5E-24 T 12-10-2018 vfu_A01575 21d5f5a08e43e6a4bf14b043d2026ee3 139 Pfam PF12680 SnoaL-like domain 6 108 2.8E-15 T 12-10-2018 IPR037401 SnoaL-like domain vfu_B00282 b98ecb432e19d185c8033f83d66e7055 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 3 255 6.7E-6 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase vfu_B00282 b98ecb432e19d185c8033f83d66e7055 264 SUPERFAMILY SSF56219 15 264 4.45E-23 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_B00282 b98ecb432e19d185c8033f83d66e7055 264 Gene3D G3DSA:3.60.10.10 1 263 3.5E-22 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_B01068 391e62aa7c655339b3dcef1850287555 442 Gene3D G3DSA:3.40.50.300 1 212 1.9E-73 T 12-10-2018 vfu_B01068 391e62aa7c655339b3dcef1850287555 442 Pfam PF00271 Helicase conserved C-terminal domain 241 341 3.8E-29 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B01068 391e62aa7c655339b3dcef1850287555 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_B01068 391e62aa7c655339b3dcef1850287555 442 SMART SM00487 20 223 9.7E-53 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_B01068 391e62aa7c655339b3dcef1850287555 442 Gene3D G3DSA:3.40.50.300 214 418 2.5E-50 T 12-10-2018 vfu_B01068 391e62aa7c655339b3dcef1850287555 442 SMART SM00490 260 341 3.9E-31 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B01068 391e62aa7c655339b3dcef1850287555 442 Pfam PF00270 DEAD/DEAH box helicase 25 196 7.0E-48 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_B01068 391e62aa7c655339b3dcef1850287555 442 SUPERFAMILY SSF52540 73 359 2.49E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Gene3D G3DSA:1.25.40.10 52 165 1.1E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SUPERFAMILY SSF48452 170 313 4.55E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SUPERFAMILY SSF48452 53 150 7.01E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Gene3D G3DSA:1.25.40.10 277 328 4.8E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 119 152 47.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 214 247 0.0034 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 278 311 4.0E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 180 213 0.53 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 SMART SM00028 85 118 0.18 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 120 149 0.037 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 182 212 0.038 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 279 306 0.0097 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF13181 Tetratricopeptide repeat 87 118 7.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Gene3D G3DSA:1.25.40.10 166 276 9.9E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02852 99ff355b6cec2bc7ec306f1c5d0e8fd1 352 Pfam PF07719 Tetratricopeptide repeat 215 247 1.5E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 vfu_B00433 d32b202283a04dbbe65e24ddfd60ed20 363 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.2E-27 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_B00433 d32b202283a04dbbe65e24ddfd60ed20 363 SUPERFAMILY SSF53901 7 325 4.62E-66 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00433 d32b202283a04dbbe65e24ddfd60ed20 363 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 324 1.8E-107 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_B00433 d32b202283a04dbbe65e24ddfd60ed20 363 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 235 324 2.1E-35 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_B00433 d32b202283a04dbbe65e24ddfd60ed20 363 Gene3D G3DSA:3.40.47.10 1 362 3.2E-157 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00433 d32b202283a04dbbe65e24ddfd60ed20 363 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 324 64.903 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 Gene3D G3DSA:3.10.50.30 75 157 1.3E-30 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 PIRSF PIRSF006092 1 157 1.1E-45 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 SUPERFAMILY SSF54534 81 156 5.89E-24 T 12-10-2018 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 Gene3D G3DSA:1.10.287.180 1 74 1.5E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 2.1E-27 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 SUPERFAMILY SSF46557 2 75 1.27E-24 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 1.0E-52 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 4.6E-24 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 vfu_A00930 13a767ac354af9ae807de34c7116f548 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.997 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 vfu_B00800 d21e63f4b9752f9307dbe0656213ae8b 335 SUPERFAMILY SSF53822 38 245 1.18E-6 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B00800 d21e63f4b9752f9307dbe0656213ae8b 335 Gene3D G3DSA:3.40.50.2300 141 322 7.6E-46 T 12-10-2018 vfu_B00800 d21e63f4b9752f9307dbe0656213ae8b 335 Pfam PF04392 ABC transporter substrate binding protein 35 324 1.3E-32 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein vfu_B00800 d21e63f4b9752f9307dbe0656213ae8b 335 Gene3D G3DSA:3.40.50.2300 37 299 7.6E-46 T 12-10-2018 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 1.7E-118 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 SMART SM00861 319 483 1.4E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_A02696 35618023bfaf816b77d68be852bddacc 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.917 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 Gene3D G3DSA:3.40.50.920 495 621 1.7E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52922 492 619 2.09E-34 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 Gene3D G3DSA:3.40.50.970 316 489 1.2E-65 T 12-10-2018 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52518 8 381 1.53E-76 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A02696 35618023bfaf816b77d68be852bddacc 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 1.6E-37 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_A02696 35618023bfaf816b77d68be852bddacc 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 1.2E-300 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A02696 35618023bfaf816b77d68be852bddacc 621 SUPERFAMILY SSF52518 317 504 2.27E-57 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A02696 35618023bfaf816b77d68be852bddacc 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.1E-27 T 12-10-2018 IPR033248 Transketolase, C-terminal domain vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 SUPERFAMILY SSF51621 495 781 3.93E-98 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Pfam PF00391 PEP-utilising enzyme, mobile domain 395 468 2.7E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 SUPERFAMILY SSF52009 369 485 9.94E-29 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Gene3D G3DSA:3.40.50.510 1 115 2.2E-31 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 497 781 2.2E-99 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Gene3D G3DSA:1.10.274.10 275 390 5.2E-59 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 687 705 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Gene3D G3DSA:3.20.20.60 477 784 1.7E-110 T 12-10-2018 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 SUPERFAMILY SSF47831 280 387 1.7E-21 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Pfam PF03610 PTS system fructose IIA component 2 97 4.1E-16 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Gene3D G3DSA:3.30.1340.10 142 228 5.1E-21 T 12-10-2018 IPR035895 HPr-like superfamily vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 153 160 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR00107 Phosphocarrier protein signature 178 193 9.2E-6 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR00107 Phosphocarrier protein signature 193 210 9.2E-6 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR00107 Phosphocarrier protein signature 153 169 9.2E-6 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 704 719 3.2E-23 T 12-10-2018 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 536 555 3.2E-23 T 12-10-2018 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 687 702 3.2E-23 T 12-10-2018 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 740 752 3.2E-23 T 12-10-2018 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Pfam PF00381 PTS HPr component phosphorylation site 144 221 2.9E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 144 220 5.2E-15 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 SUPERFAMILY SSF53062 2 111 1.55E-22 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 427 438 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 SUPERFAMILY SSF55594 143 227 9.42E-20 T 12-10-2018 IPR035895 HPr-like superfamily vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Pfam PF05524 PEP-utilising enzyme, N-terminal 258 370 1.0E-22 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 257 782 9.1E-136 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 vfu_B00882 d5ac628b3264e6e2e61ea4a0aeafda28 784 Gene3D G3DSA:3.50.30.10 258 476 5.2E-59 T 12-10-2018 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 Pfam PF08245 Mur ligase middle domain 54 194 2.7E-7 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 SUPERFAMILY SSF53244 288 417 4.27E-32 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 337 2.0E-6 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 SUPERFAMILY SSF53623 14 285 7.59E-86 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 PIRSF PIRSF001563 7 421 4.0E-107 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 Gene3D G3DSA:3.40.1190.10 1 287 6.5E-93 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 Gene3D G3DSA:3.90.190.20 289 421 5.3E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02600 ed4489baed67d19963b90c2a32c55a7a 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 5.9E-107 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 vfu_A02470 78663da0ecb19e83a5ffdf83b06a59d3 87 Gene3D G3DSA:3.30.1070.10 1 84 5.2E-26 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 vfu_A02470 78663da0ecb19e83a5ffdf83b06a59d3 87 SUPERFAMILY SSF55229 33 85 1.7E-16 T 12-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 vfu_A02470 78663da0ecb19e83a5ffdf83b06a59d3 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 4.8E-23 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 vfu_A02470 78663da0ecb19e83a5ffdf83b06a59d3 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 7.0E-34 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 vfu_A02470 78663da0ecb19e83a5ffdf83b06a59d3 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.783 T 12-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 vfu_B01453 61d53ec32bbd104175bfc9da45dd9894 347 Pfam PF12849 PBP superfamily domain 17 308 3.1E-65 T 12-10-2018 IPR024370 PBP domain vfu_B01453 61d53ec32bbd104175bfc9da45dd9894 347 Gene3D G3DSA:3.40.190.10 26 327 3.0E-120 T 12-10-2018 vfu_B01453 61d53ec32bbd104175bfc9da45dd9894 347 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 26 336 3.2E-119 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 vfu_B01453 61d53ec32bbd104175bfc9da45dd9894 347 SUPERFAMILY SSF53850 25 336 3.75E-94 T 12-10-2018 vfu_B01453 61d53ec32bbd104175bfc9da45dd9894 347 Gene3D G3DSA:3.40.190.10 100 280 3.0E-120 T 12-10-2018 vfu_B01453 61d53ec32bbd104175bfc9da45dd9894 347 PIRSF PIRSF002756 3 339 1.1E-107 T 12-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 40 134 2.01E-25 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 554 657 1.44E-15 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 7.7E-70 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82866 290 489 4.19E-46 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82714 704 788 1.31E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82714 183 266 2.75E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 8.6E-277 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.70.1430 556 653 0.0 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82866 794 1010 1.01E-47 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 Gene3D G3DSA:3.30.70.1440 654 848 0.0 T 12-10-2018 vfu_A02663 3f819dfe33aa4fe13f93c8e3e3343e3a 1037 SUPERFAMILY SSF82693 139 324 1.92E-19 T 12-10-2018 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Pfam PF00467 KOW motif 131 162 4.8E-7 T 12-10-2018 IPR005824 KOW vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SMART SM00738 6 115 2.2E-49 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Gene3D G3DSA:2.30.30.30 123 181 6.6E-26 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SMART SM00739 127 154 4.8E-5 T 12-10-2018 IPR005824 KOW vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SUPERFAMILY SSF82679 6 116 1.1E-39 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 1.1E-70 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.782 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Gene3D G3DSA:3.30.70.940 1 122 6.3E-47 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 Pfam PF02357 Transcription termination factor nusG 7 112 2.0E-26 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site vfu_A00043 b7cf0f074cb5e1c08ee846dbdd637e7b 182 SUPERFAMILY SSF50104 125 181 1.2E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily vfu_A02354 7b828388420c63cae01ea060eca4e754 460 Pfam PF09190 DALR domain 341 402 4.2E-25 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 Gene3D G3DSA:1.20.120.640 306 460 1.4E-50 T 12-10-2018 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.4 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 5.5E-195 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 SMART SM00840 341 402 6.0E-28 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 SUPERFAMILY SSF47323 316 459 8.89E-40 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 SUPERFAMILY SSF52374 1 313 7.93E-106 T 12-10-2018 vfu_A02354 7b828388420c63cae01ea060eca4e754 460 Gene3D G3DSA:3.40.50.620 1 305 5.8E-140 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02354 7b828388420c63cae01ea060eca4e754 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 5.9E-144 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 vfu_A00298 ff509ada21998a74a2ec12c330efc388 497 Pfam PF00990 Diguanylate cyclase, GGDEF domain 337 482 9.6E-32 T 12-10-2018 IPR000160 GGDEF domain vfu_A00298 ff509ada21998a74a2ec12c330efc388 497 SMART SM00267 325 486 1.9E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_A00298 ff509ada21998a74a2ec12c330efc388 497 Gene3D G3DSA:3.30.70.270 323 486 1.6E-43 T 12-10-2018 vfu_A00298 ff509ada21998a74a2ec12c330efc388 497 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 484 1.0E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_A00298 ff509ada21998a74a2ec12c330efc388 497 SUPERFAMILY SSF55073 341 484 2.59E-35 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00298 ff509ada21998a74a2ec12c330efc388 497 Pfam PF02743 Cache domain 50 255 8.1E-14 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A01334 03ba382dea49ad6663ac4d43ce6102f3 203 Pfam PF03942 DTW domain 3 185 9.9E-49 T 12-10-2018 IPR005636 DTW vfu_A01334 03ba382dea49ad6663ac4d43ce6102f3 203 SMART SM01144 1 190 6.1E-72 T 12-10-2018 IPR005636 DTW vfu_B00080 f104a272e874a55d4e3ccc3ffbc634b9 155 Pfam PF02566 OsmC-like protein 56 153 1.7E-14 T 12-10-2018 IPR003718 OsmC/Ohr family vfu_B00080 f104a272e874a55d4e3ccc3ffbc634b9 155 SUPERFAMILY SSF82784 1 153 2.62E-48 T 12-10-2018 IPR036102 OsmC/Ohr superfamily vfu_B00080 f104a272e874a55d4e3ccc3ffbc634b9 155 Gene3D G3DSA:3.30.300.20 1 155 3.5E-51 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_B00878 da275c3858896292d7986c6330ed262d 382 Gene3D G3DSA:1.10.1040.10 208 382 7.8E-66 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B00878 da275c3858896292d7986c6330ed262d 382 Gene3D G3DSA:3.40.50.720 2 206 9.8E-78 T 12-10-2018 vfu_B00878 da275c3858896292d7986c6330ed262d 382 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 8.0E-24 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00878 da275c3858896292d7986c6330ed262d 382 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 9.8E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00878 da275c3858896292d7986c6330ed262d 382 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 9.8E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00878 da275c3858896292d7986c6330ed262d 382 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 9.8E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00878 da275c3858896292d7986c6330ed262d 382 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 9.8E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00878 da275c3858896292d7986c6330ed262d 382 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00878 da275c3858896292d7986c6330ed262d 382 SUPERFAMILY SSF48179 205 382 1.36E-46 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00878 da275c3858896292d7986c6330ed262d 382 SUPERFAMILY SSF51735 3 203 1.32E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00878 da275c3858896292d7986c6330ed262d 382 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 374 1.2E-58 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 vfu_B00878 da275c3858896292d7986c6330ed262d 382 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 379 40.878 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.286 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 4.3E-165 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 SUPERFAMILY SSF53659 4 362 3.84E-124 T 12-10-2018 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 SMART SM01329 7 356 2.2E-202 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 Gene3D G3DSA:3.40.718.10 1 363 3.9E-158 T 12-10-2018 vfu_A00807 1e930679e8886350f508f1d0e91fc333 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 8.6E-137 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 vfu_A01525 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 Gene3D G3DSA:1.10.1200.10 3 85 1.7E-19 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01525 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 SUPERFAMILY SSF47336 5 83 3.01E-20 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01525 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 Pfam PF00550 Phosphopantetheine attachment site 11 78 7.4E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01525 c369e4e0f8d46b6ea09d212f3d3d5e3a 85 Hamap MF_01217 Acyl carrier protein [acpP]. 8 82 14.193 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 SUPERFAMILY SSF50156 226 351 4.99E-28 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 Gene3D G3DSA:2.30.42.10 363 456 5.9E-28 T 12-10-2018 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 Gene3D G3DSA:2.40.10.120 38 262 2.4E-85 T 12-10-2018 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 PRINTS PR00834 HtrA/DegQ protease family signature 103 115 6.7E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 6.7E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 PRINTS PR00834 HtrA/DegQ protease family signature 124 144 6.7E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 PRINTS PR00834 HtrA/DegQ protease family signature 308 320 6.7E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 PRINTS PR00834 HtrA/DegQ protease family signature 165 189 6.7E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 PRINTS PR00834 HtrA/DegQ protease family signature 200 217 6.7E-58 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 445 4.5E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 SUPERFAMILY SSF50494 38 264 6.78E-66 T 12-10-2018 IPR009003 Peptidase S1, PA clan vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 Gene3D G3DSA:2.30.42.10 266 362 8.8E-29 T 12-10-2018 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 Pfam PF13180 PDZ domain 270 359 3.5E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 SUPERFAMILY SSF50156 383 455 6.05E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 SMART SM00228 268 350 7.5E-18 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 SMART SM00228 375 448 8.5E-8 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 Pfam PF13365 Trypsin-like peptidase domain 93 229 1.4E-31 T 12-10-2018 vfu_A02955 a6f3654f6fcaf2cbf3dfa1e13d7edeac 456 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 454 8.8E-167 T 12-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 vfu_A00098 ffee22af53177088b6dca28f4c77ca4c 395 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 148 394 1.9E-88 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase vfu_A00098 ffee22af53177088b6dca28f4c77ca4c 395 Pfam PF02397 Bacterial sugar transferase 207 389 2.1E-62 T 12-10-2018 IPR003362 Bacterial sugar transferase vfu_B00866 fe85bd9eec8784571d8ce771c56389dc 312 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 3 297 1.8E-37 T 12-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 vfu_B00866 fe85bd9eec8784571d8ce771c56389dc 312 Gene3D G3DSA:1.10.4160.10 2 312 4.4E-27 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Gene3D G3DSA:3.90.1170.50 20 144 1.5E-260 T 12-10-2018 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 35 141 2.4E-25 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 SMART SM01008 35 143 2.4E-33 T 12-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Gene3D G3DSA:3.30.365.10 191 285 1.5E-260 T 12-10-2018 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 SUPERFAMILY SSF56003 171 773 2.88E-181 T 12-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Gene3D G3DSA:3.30.365.10 145 771 1.5E-260 T 12-10-2018 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Gene3D G3DSA:3.30.365.10 462 606 1.5E-260 T 12-10-2018 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 SUPERFAMILY SSF54665 8 141 3.53E-37 T 12-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Gene3D G3DSA:3.30.365.10 158 409 1.5E-260 T 12-10-2018 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 171 704 3.1E-185 T 12-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 vfu_B00188 9b18c6f19cd2e2896da6ba32f63dc3ec 792 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 21 773 0.0 T 12-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 vfu_A02301 d094f8662c12aa4e381582879b19c0e6 195 Gene3D G3DSA:3.30.1460.30 4 100 1.6E-14 T 12-10-2018 vfu_A02301 d094f8662c12aa4e381582879b19c0e6 195 Pfam PF04994 TfoX C-terminal domain 112 190 9.0E-27 T 12-10-2018 IPR007077 TfoX, C-terminal vfu_A02301 d094f8662c12aa4e381582879b19c0e6 195 SUPERFAMILY SSF159894 4 100 1.54E-24 T 12-10-2018 vfu_A02301 d094f8662c12aa4e381582879b19c0e6 195 Gene3D G3DSA:1.10.150.20 111 195 4.5E-17 T 12-10-2018 vfu_A02301 d094f8662c12aa4e381582879b19c0e6 195 Pfam PF04993 TfoX N-terminal domain 12 97 3.5E-21 T 12-10-2018 IPR007076 TfoX, N-terminal vfu_A02301 d094f8662c12aa4e381582879b19c0e6 195 PIRSF PIRSF028788 11 195 1.0E-33 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type vfu_A02506 50d6b773c3854efe814284338a3bc310 87 Pfam PF10963 Phage tail assembly chaperone 5 87 4.2E-31 T 12-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 vfu_A02506 50d6b773c3854efe814284338a3bc310 87 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 5 86 4.0E-12 T 12-10-2018 IPR024406 Phage tail assembly chaperone TAC-10 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 7.7E-71 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.768 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PIRSF PIRSF002133 1 124 2.1E-54 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 SUPERFAMILY SSF50249 3 123 4.37E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 Gene3D G3DSA:2.40.50.140 1 124 5.8E-64 T 12-10-2018 vfu_A00003 eb8c6e51d3107dcd86f56bca60b1a45e 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 6.2E-43 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 Gene3D G3DSA:2.40.30.10 289 372 6.6E-34 T 12-10-2018 vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 Gene3D G3DSA:2.30.30.280 220 287 2.1E-27 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 368 39.88 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 Pfam PF03054 tRNA methyl transferase 11 367 1.5E-142 T 12-10-2018 vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 Gene3D G3DSA:3.40.50.620 1 219 4.0E-94 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 367 1.3E-151 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 vfu_A01585 2d891be09a2fecb574dd5885c09abe3f 372 SUPERFAMILY SSF52402 9 251 4.41E-57 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 SUPERFAMILY SSF51971 143 407 7.65E-65 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 4.0E-198 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.6E-23 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.6E-23 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.6E-23 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.6E-23 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 6.5E-25 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 SUPERFAMILY SSF46548 2 155 1.26E-34 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:3.50.50.60 249 406 4.0E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 SUPERFAMILY SSF51971 386 479 2.12E-8 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:3.40.50.720 144 248 2.4E-14 T 12-10-2018 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 Gene3D G3DSA:1.10.1060.10 9 143 2.8E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02907 0b2a2a57f5fd7891f8825e0692dba85d 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 38 130 2.8E-24 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 PIRSF PIRSF001259 3 369 3.6E-127 T 12-10-2018 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 SUPERFAMILY SSF142695 205 367 6.8E-46 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.873 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.2E-83 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 Pfam PF00925 GTP cyclohydrolase II 207 367 6.5E-38 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 2.1E-74 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 Gene3D G3DSA:3.90.870.10 1 205 2.4E-87 T 12-10-2018 vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 SUPERFAMILY SSF55821 3 202 3.43E-85 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily vfu_A01061 8bbe8a018181255da27b8bd8e361d57a 369 Gene3D G3DSA:3.40.50.10990 206 368 1.2E-29 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_B01509 35742732299fb5f9fd55d8b35ada8e44 116 Pfam PF04126 Cyclophilin-like 1 97 1.2E-5 T 12-10-2018 IPR025658 Cyclophilin TM1367-like domain vfu_B01509 35742732299fb5f9fd55d8b35ada8e44 116 SUPERFAMILY SSF50891 1 115 4.17E-31 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_B01509 35742732299fb5f9fd55d8b35ada8e44 116 Gene3D G3DSA:2.40.100.20 1 115 3.3E-18 T 12-10-2018 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 SUPERFAMILY SSF74650 365 867 1.16E-67 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 Gene3D G3DSA:2.70.98.30 469 757 3.6E-76 T 12-10-2018 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 Gene3D G3DSA:1.20.1270.50 271 370 3.2E-26 T 12-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 SUPERFAMILY SSF88713 2 260 3.19E-44 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 Gene3D G3DSA:3.20.110.10 1 264 9.4E-93 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 SMART SM00872 267 345 1.4E-13 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 375 865 5.4E-32 T 12-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 SUPERFAMILY SSF88688 272 363 3.07E-6 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 Pfam PF09261 Alpha mannosidase middle domain 268 345 7.8E-7 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 vfu_B01213 9ec31a2352f24c60631de8b6a564a0aa 868 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 2 256 3.3E-33 T 12-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 Gene3D G3DSA:2.40.420.20 258 326 1.6E-69 T 12-10-2018 vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 SUPERFAMILY SSF111369 36 253 2.09E-39 T 12-10-2018 vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 247 1.4E-31 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 Gene3D G3DSA:1.10.287.470 82 141 1.6E-69 T 12-10-2018 vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 Gene3D G3DSA:2.40.50.100 47 175 1.6E-69 T 12-10-2018 vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 23 328 1.0E-88 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A02664 b21e7c2e789d402571e8cf4f121910ab 341 Gene3D G3DSA:2.40.30.170 34 257 1.6E-69 T 12-10-2018 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 SMART SM00490 515 599 5.3E-22 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 39 674 1.3E-234 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Gene3D G3DSA:3.40.50.300 221 460 6.8E-82 T 12-10-2018 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Pfam PF17191 RecG wedge domain 24 181 7.8E-20 T 12-10-2018 IPR033454 RecG, wedge domain vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 SUPERFAMILY SSF50249 19 184 6.0E-40 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Gene3D G3DSA:1.10.150.20 11 51 4.8E-5 T 12-10-2018 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Gene3D G3DSA:3.40.50.300 467 640 1.6E-52 T 12-10-2018 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 SUPERFAMILY SSF52540 302 663 8.95E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Pfam PF00271 Helicase conserved C-terminal domain 491 598 7.1E-17 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Gene3D G3DSA:2.40.50.140 57 148 4.0E-13 T 12-10-2018 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 Pfam PF00270 DEAD/DEAH box helicase 282 443 2.1E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 SMART SM00487 275 469 3.6E-31 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00542 a2d05abe466695a41ee83f885f10898d 703 SUPERFAMILY SSF52540 227 463 6.36E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 210 2.6E-49 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 429 439 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 228 489 8.0E-69 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 SUPERFAMILY SSF53613 224 488 9.82E-75 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 210 22.907 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 225 490 21.78 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 Gene3D G3DSA:3.40.50.10260 4 216 2.7E-59 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 Pfam PF03853 YjeF-related protein N-terminus 30 189 1.8E-44 T 12-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 SUPERFAMILY SSF64153 7 246 3.92E-67 T 12-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 315 325 - T 12-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 PIRSF PIRSF017184 6 490 1.4E-140 T 12-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 Gene3D G3DSA:3.40.1190.20 217 490 5.9E-84 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00667 d157de46a7c17fbd6f5be0b5fe8fe4f3 490 Pfam PF01256 Carbohydrate kinase 249 484 1.3E-57 T 12-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 vfu_A02356 63ade4a71c8c710bbfa8ca52e681ab6d 218 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 215 105.226 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 vfu_A02356 63ade4a71c8c710bbfa8ca52e681ab6d 218 SUPERFAMILY SSF56300 5 197 8.5E-26 T 12-10-2018 vfu_A02356 63ade4a71c8c710bbfa8ca52e681ab6d 218 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 1 206 1.9E-96 T 12-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 vfu_A02356 63ade4a71c8c710bbfa8ca52e681ab6d 218 Gene3D G3DSA:3.60.21.10 2 215 1.1E-12 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_A02356 63ade4a71c8c710bbfa8ca52e681ab6d 218 Pfam PF00149 Calcineurin-like phosphoesterase 8 174 2.1E-6 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_A00694 44199878fff02a8750e0f7dd5ad1e217 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 4.2E-24 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 vfu_A00694 44199878fff02a8750e0f7dd5ad1e217 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 1.4E-25 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain vfu_A00694 44199878fff02a8750e0f7dd5ad1e217 206 Gene3D G3DSA:3.10.50.40 68 206 1.4E-48 T 12-10-2018 vfu_A00694 44199878fff02a8750e0f7dd5ad1e217 206 SUPERFAMILY SSF54534 7 205 4.52E-54 T 12-10-2018 vfu_A00694 44199878fff02a8750e0f7dd5ad1e217 206 Gene3D G3DSA:1.10.287.460 4 67 2.5E-18 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 2.3E-61 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 Gene3D G3DSA:1.10.246.130 283 405 3.5E-36 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 Gene3D G3DSA:3.60.20.40 406 584 2.1E-59 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 2.1E-160 T 12-10-2018 vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 SUPERFAMILY SSF56235 41 583 1.43E-168 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A00223 96eef271721956303b1c29a6ec05f8c5 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 1.4E-132 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 vfu_A00066 aa398ce5698786173123cb59d7156283 649 Gene3D G3DSA:3.30.300.30 518 649 2.0E-30 T 12-10-2018 vfu_A00066 aa398ce5698786173123cb59d7156283 649 SUPERFAMILY SSF56801 10 644 1.44E-183 T 12-10-2018 vfu_A00066 aa398ce5698786173123cb59d7156283 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.5E-25 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A00066 aa398ce5698786173123cb59d7156283 649 Gene3D G3DSA:3.40.50.12780 50 515 2.6E-104 T 12-10-2018 vfu_A00066 aa398ce5698786173123cb59d7156283 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.9E-19 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 vfu_A00066 aa398ce5698786173123cb59d7156283 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 21 643 0.0 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 vfu_A00066 aa398ce5698786173123cb59d7156283 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A00066 aa398ce5698786173123cb59d7156283 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.607 T 12-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 vfu_A00066 aa398ce5698786173123cb59d7156283 649 Pfam PF00501 AMP-binding enzyme 84 522 4.1E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_B00239 a1ff7accb4db5a75ebaaa8fcf75bf66a 281 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 1 268 6.3E-97 T 12-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 vfu_B00239 a1ff7accb4db5a75ebaaa8fcf75bf66a 281 Pfam PF03741 Integral membrane protein TerC family 37 237 5.1E-54 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 Gene3D G3DSA:3.30.460.10 20 179 6.3E-63 T 12-10-2018 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 23 453 3.5E-159 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 448 37.762 T 12-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 Pfam PF12626 Polymerase A arginine-rich C-terminus 330 448 3.5E-37 T 12-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 Gene3D G3DSA:1.10.3090.10 181 431 4.3E-91 T 12-10-2018 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 270 1.6E-21 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 SUPERFAMILY SSF81301 25 180 2.18E-40 T 12-10-2018 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 SUPERFAMILY SSF81891 181 416 2.49E-47 T 12-10-2018 vfu_A00892 b3b59f2368137381c056beb3ce2fcfe5 456 Pfam PF01743 Poly A polymerase head domain 54 183 1.5E-38 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.4E-260 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Gene3D G3DSA:3.40.50.10490 448 595 5.2E-145 T 12-10-2018 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.52 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Gene3D G3DSA:3.60.20.10 2 241 2.0E-80 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 SUPERFAMILY SSF53697 245 610 1.76E-112 T 12-10-2018 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 SUPERFAMILY SSF56235 2 234 1.89E-74 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Gene3D G3DSA:3.40.50.10490 249 609 5.2E-145 T 12-10-2018 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Pfam PF01380 SIS domain 290 419 5.0E-32 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Pfam PF01380 SIS domain 463 592 1.9E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A03023 0278f1111f2824cad15a33c97aaceb62 610 Pfam PF13522 Glutamine amidotransferase domain 62 174 3.9E-22 T 12-10-2018 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 SMART SM00936 282 372 1.0E-38 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 262 1.3E-94 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 Gene3D G3DSA:3.40.710.10 32 282 1.3E-90 T 12-10-2018 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 9.9E-28 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 4.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 4.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 4.6E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 SUPERFAMILY SSF56601 12 282 1.28E-84 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 Gene3D G3DSA:2.60.410.10 283 372 2.0E-31 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A02654 a3907b18ce4730e25b99be727b3999dc 391 SUPERFAMILY SSF69189 282 374 1.39E-28 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A01151 17479c1ad05165f472e7c2012e3b9b69 423 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 9.1E-73 T 12-10-2018 IPR018642 Protein of unknown function DUF2066 vfu_A00839 6a0e0f8ac85a6639649768fc4c1bafb8 243 Gene3D G3DSA:3.20.20.70 1 243 1.5E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00839 6a0e0f8ac85a6639649768fc4c1bafb8 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 3.9E-104 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 vfu_A00839 6a0e0f8ac85a6639649768fc4c1bafb8 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 131.62 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 vfu_A00839 6a0e0f8ac85a6639649768fc4c1bafb8 243 SUPERFAMILY SSF63892 4 242 1.83E-101 T 12-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 vfu_A00839 6a0e0f8ac85a6639649768fc4c1bafb8 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 4.5E-98 T 12-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 SUPERFAMILY SSF52343 112 241 1.23E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 Pfam PF00970 Oxidoreductase FAD-binding domain 21 106 1.9E-12 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 296 304 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 Gene3D G3DSA:3.10.20.30 245 347 1.2E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 154 165 2.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 207 215 2.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 2.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 58 65 2.4E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 Pfam PF00175 Oxidoreductase NAD-binding domain 119 221 9.4E-14 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 Gene3D G3DSA:2.40.30.10 7 107 1.5E-24 T 12-10-2018 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 SUPERFAMILY SSF54292 242 346 2.1E-24 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 SUPERFAMILY SSF63380 9 106 2.01E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00406 Cytochrome B5 reductase signature 94 108 8.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00406 Cytochrome B5 reductase signature 58 65 8.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00406 Cytochrome B5 reductase signature 118 137 8.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 PRINTS PR00406 Cytochrome B5 reductase signature 207 215 8.5E-5 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 272 338 1.8E-13 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_B01298 4959d55ced3e48ab7cd122e58122b3ba 347 Gene3D G3DSA:3.40.50.80 114 244 4.3E-31 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A01793 47e47e7e9f37066460d061dba5a19433 473 PIRSF PIRSF002457 1 473 2.6E-113 T 12-10-2018 IPR030676 Citrate carrier CitT-related vfu_A01793 47e47e7e9f37066460d061dba5a19433 473 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 463 6.8E-49 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_A01793 47e47e7e9f37066460d061dba5a19433 473 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 36 463 2.4E-78 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 SUPERFAMILY SSF52540 48 362 1.01E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 Pfam PF00271 Helicase conserved C-terminal domain 239 342 3.7E-14 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 SMART SM00487 1 178 6.6E-13 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 SMART SM00490 262 344 1.6E-11 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 Gene3D G3DSA:3.40.50.300 189 378 6.0E-32 T 12-10-2018 vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 Gene3D G3DSA:3.40.50.300 1 166 1.2E-28 T 12-10-2018 vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 2.0E-23 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 vfu_A01711 9e0341034279d7538d76ca77dbc66798 578 SUPERFAMILY SSF57829 425 465 2.38E-6 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 SUPERFAMILY SSF52540 2 141 5.72E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 PIRSF PIRSF035805 1 191 1.0E-57 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 Pfam PF00265 Thymidine kinase 2 186 4.2E-61 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.961 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 Gene3D G3DSA:3.40.50.300 2 141 1.5E-24 T 12-10-2018 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 Gene3D G3DSA:3.30.60.20 144 189 4.4E-8 T 12-10-2018 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 vfu_A01638 5a0eb10a6c213c59e55c5405ca5cef25 192 SUPERFAMILY SSF57716 142 189 1.19E-16 T 12-10-2018 vfu_A02780 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 5.5E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 5.5E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 5.5E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 5.5E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 5.5E-47 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 Gene3D G3DSA:3.40.630.10 90 430 1.2E-107 T 12-10-2018 vfu_A02780 66566827fee49702a87d6483ae75b112 430 PIRSF PIRSF036388 1 430 9.9E-226 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 vfu_A02780 66566827fee49702a87d6483ae75b112 430 SUPERFAMILY SSF53187 104 427 6.28E-102 T 12-10-2018 vfu_A02780 66566827fee49702a87d6483ae75b112 430 Hamap MF_00504 Peptidase B [pepB]. 3 427 65.177 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 vfu_A02780 66566827fee49702a87d6483ae75b112 430 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 2.0E-103 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 vfu_A02780 66566827fee49702a87d6483ae75b112 430 Pfam PF12404 Peptidase 5 81 3.6E-32 T 12-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 vfu_B00884 a2a85e8833a385e8ba3c97436cb28287 353 SUPERFAMILY SSF82549 11 353 1.52E-122 T 12-10-2018 vfu_B00884 a2a85e8833a385e8ba3c97436cb28287 353 Gene3D G3DSA:3.40.50.10440 12 182 3.8E-62 T 12-10-2018 vfu_B00884 a2a85e8833a385e8ba3c97436cb28287 353 Pfam PF02733 Dak1 domain 18 349 1.6E-123 T 12-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 vfu_B00884 a2a85e8833a385e8ba3c97436cb28287 353 Gene3D G3DSA:3.30.1180.20 183 353 4.6E-54 T 12-10-2018 vfu_B00884 a2a85e8833a385e8ba3c97436cb28287 353 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 2 350 2.0E-139 T 12-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 900 1.0E-286 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 7.2E-16 T 12-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF52540 395 568 4.42E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF50447 573 655 6.65E-25 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 325 375 5.8E-15 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 7.5E-9 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF50447 802 898 7.27E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 ProSitePatterns PS01176 Initiation factor 2 signature. 851 873 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF46955 3 50 1.46E-12 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 404 559 2.9E-32 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 SUPERFAMILY SSF52156 678 807 1.44E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF11987 Translation-initiation factor 2 685 790 1.1E-36 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:2.40.30.10 802 899 2.8E-34 T 12-10-2018 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:2.40.30.10 572 690 7.1E-42 T 12-10-2018 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Pfam PF00009 Elongation factor Tu GTP binding domain 404 561 4.9E-32 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:3.30.56.50 2 50 3.7E-23 T 12-10-2018 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:3.40.50.300 398 571 1.1E-69 T 12-10-2018 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 898 17.671 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 vfu_A00940 f963bd2296d185f5fe7fbeeed1728c6c 901 Gene3D G3DSA:3.40.50.10050 695 801 6.2E-38 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 SUPERFAMILY SSF46785 6 86 9.91E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 Pfam PF03466 LysR substrate binding domain 92 292 1.8E-39 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 5.8E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 Gene3D G3DSA:3.40.190.290 95 294 2.1E-62 T 12-10-2018 vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 Gene3D G3DSA:1.10.10.10 5 93 2.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00924 3a60bf5feee5c089b575d109f6e3cc0f 304 SUPERFAMILY SSF53850 91 298 1.23E-40 T 12-10-2018 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 SUPERFAMILY SSF50447 205 301 4.52E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.8E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Gene3D G3DSA:2.40.30.10 338 393 3.7E-29 T 12-10-2018 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.0E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.3E-58 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 SUPERFAMILY SSF52540 6 219 1.59E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Gene3D G3DSA:3.40.50.300 1 203 3.5E-70 T 12-10-2018 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.1E-14 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.753 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.0E-231 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 SUPERFAMILY SSF50465 298 393 2.04E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal vfu_A00045 1cc128a07f103f3bf3f9a2ff1f2c681b 394 Gene3D G3DSA:2.40.30.10 206 334 3.9E-52 T 12-10-2018 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.4E-207 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PIRSF PIRSF001400 1 431 2.3E-191 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 SUPERFAMILY SSF54826 3 138 5.4E-56 T 12-10-2018 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 Hamap MF_00318 Enolase [eno]. 2 417 44.349 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 Pfam PF03952 Enolase, N-terminal domain 4 134 7.4E-58 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 Gene3D G3DSA:3.20.20.120 128 433 1.3E-132 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily vfu_A00846 257df1170339c1004d66a414f50fd39c 433 SMART SM01193 4 134 9.5E-93 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 2.1E-137 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 Gene3D G3DSA:3.30.390.10 1 127 1.4E-54 T 12-10-2018 IPR029017 Enolase-like, N-terminal vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00846 257df1170339c1004d66a414f50fd39c 433 SUPERFAMILY SSF51604 143 428 4.39E-126 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily vfu_A00846 257df1170339c1004d66a414f50fd39c 433 SMART SM01192 143 431 3.6E-213 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_B00424 1f1e66ba519683717be33aa40f98aefb 676 SUPERFAMILY SSF52540 476 654 7.44E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00424 1f1e66ba519683717be33aa40f98aefb 676 Pfam PF06564 Cellulose biosynthesis protein BcsQ 489 622 6.3E-6 T 12-10-2018 IPR017746 Cellulose synthase operon protein BcsQ vfu_B00424 1f1e66ba519683717be33aa40f98aefb 676 Gene3D G3DSA:3.40.50.300 409 662 1.5E-37 T 12-10-2018 vfu_A01686 5e5a5462c95c6ade36913483c5d1cde0 286 Pfam PF00892 EamA-like transporter family 7 137 7.2E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A01686 5e5a5462c95c6ade36913483c5d1cde0 286 Pfam PF00892 EamA-like transporter family 149 278 3.7E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A01686 5e5a5462c95c6ade36913483c5d1cde0 286 SUPERFAMILY SSF103481 40 141 6.02E-11 T 12-10-2018 vfu_A01686 5e5a5462c95c6ade36913483c5d1cde0 286 SUPERFAMILY SSF103481 189 283 1.7E-14 T 12-10-2018 vfu_A00875 f07120eb46aeba9d2ec9d63a43c41028 173 SUPERFAMILY SSF52218 1 166 2.27E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A00875 f07120eb46aeba9d2ec9d63a43c41028 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 7.0E-65 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 vfu_A00875 f07120eb46aeba9d2ec9d63a43c41028 173 Pfam PF00258 Flavodoxin 5 161 4.0E-25 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 vfu_A00875 f07120eb46aeba9d2ec9d63a43c41028 173 PIRSF PIRSF038996 1 172 4.9E-55 T 12-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 vfu_A00875 f07120eb46aeba9d2ec9d63a43c41028 173 Gene3D G3DSA:3.40.50.360 1 172 8.2E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Gene3D G3DSA:3.90.550.10 1 219 1.2E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 SUPERFAMILY SSF53448 1 244 2.1E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 309 343 2.0E-5 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 261 290 2.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 387 421 1.3E-7 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 SUPERFAMILY SSF51161 247 429 2.52E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 444 41.747 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 446 2.6E-204 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Pfam PF12804 MobA-like NTP transferase domain 1 117 7.9E-22 T 12-10-2018 IPR025877 MobA-like NTP transferase vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 Gene3D G3DSA:2.160.10.10 220 448 1.0E-69 T 12-10-2018 vfu_A00352 584b2d677b6df5e266f2f69f70994484 448 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 395 423 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 vfu_B00556 74fe8767f3d1e370c5d353f253f19777 167 Pfam PF05163 DinB family 5 161 2.0E-16 T 12-10-2018 IPR007837 DNA damage-inducible protein DinB vfu_B00556 74fe8767f3d1e370c5d353f253f19777 167 SUPERFAMILY SSF109854 6 153 1.76E-24 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes vfu_B00556 74fe8767f3d1e370c5d353f253f19777 167 Gene3D G3DSA:1.20.120.450 1 156 3.0E-23 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes vfu_A02765 07cb72439624ca9a7a11d0b21aacf90a 395 Gene3D G3DSA:1.10.150.130 102 194 1.4E-15 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A02765 07cb72439624ca9a7a11d0b21aacf90a 395 Pfam PF13356 Arm DNA-binding domain 2 88 4.9E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain vfu_A02765 07cb72439624ca9a7a11d0b21aacf90a 395 Gene3D G3DSA:1.10.443.10 200 386 1.0E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A02765 07cb72439624ca9a7a11d0b21aacf90a 395 SUPERFAMILY SSF56349 98 384 1.95E-60 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A02765 07cb72439624ca9a7a11d0b21aacf90a 395 Pfam PF00589 Phage integrase family 204 374 5.3E-23 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A02765 07cb72439624ca9a7a11d0b21aacf90a 395 Gene3D G3DSA:3.30.160.390 1 101 4.5E-25 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SMART SM00091 250 316 0.054 T 12-10-2018 IPR000014 PAS domain vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SMART SM00091 365 431 1.1E-7 T 12-10-2018 IPR000014 PAS domain vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Pfam PF17152 Periplasmic sensor domain 43 137 1.1E-14 T 12-10-2018 IPR033417 Periplasmic sensor domain CHASE8 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SUPERFAMILY SSF55073 495 651 8.63E-46 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Gene3D G3DSA:3.30.70.270 483 656 3.4E-52 T 12-10-2018 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 649 2.8E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Gene3D G3DSA:3.30.450.20 241 360 2.3E-7 T 12-10-2018 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 364 485 1.1E-11 T 12-10-2018 IPR000014 PAS domain vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Gene3D G3DSA:3.30.450.20 361 482 3.8E-15 T 12-10-2018 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SUPERFAMILY SSF55785 360 463 5.45E-16 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Pfam PF00990 Diguanylate cyclase, GGDEF domain 490 645 3.5E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SMART SM00304 183 236 5.8E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Pfam PF13188 PAS domain 254 286 0.096 T 12-10-2018 IPR000014 PAS domain vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SUPERFAMILY SSF158472 183 232 1.09E-5 T 12-10-2018 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SUPERFAMILY SSF55785 242 314 2.51E-6 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 Pfam PF00989 PAS fold 369 457 2.1E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_B01391 90a41002530f1174fc0666ce1504d82a 660 SMART SM00267 479 650 4.3E-55 T 12-10-2018 IPR000160 GGDEF domain vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 SMART SM00342 197 278 2.2E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 6.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 6.0E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 Pfam PF12833 Helix-turn-helix domain 203 278 2.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 Pfam PF06719 AraC-type transcriptional regulator N-terminus 41 170 1.4E-12 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 274 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 SUPERFAMILY SSF46689 235 278 3.45E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 Gene3D G3DSA:1.10.10.60 178 282 3.0E-26 T 12-10-2018 vfu_B01417 d602772dba00fe817c4ae6b32a18d7bc 285 SUPERFAMILY SSF46689 180 231 3.52E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01947 d9a32176cf7101fa784f42751b21b942 352 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 1.3E-158 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_A01947 d9a32176cf7101fa784f42751b21b942 352 SUPERFAMILY SSF51569 8 349 7.97E-130 T 12-10-2018 vfu_A01947 d9a32176cf7101fa784f42751b21b942 352 Gene3D G3DSA:3.20.20.70 1 351 3.6E-152 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01947 d9a32176cf7101fa784f42751b21b942 352 PIRSF PIRSF001361 1 352 4.3E-155 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_A01947 d9a32176cf7101fa784f42751b21b942 352 Pfam PF00793 DAHP synthetase I family 44 338 2.0E-98 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.5E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.5E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.5E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 SUPERFAMILY SSF46955 3 125 2.49E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A02191 5186a18a464225479ca72aa99f93d749 146 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.4E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 SMART SM00422 3 71 5.1E-24 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 Gene3D G3DSA:1.10.1660.10 1 126 5.9E-33 T 12-10-2018 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 1.1E-67 T 12-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 vfu_A02191 5186a18a464225479ca72aa99f93d749 146 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 SUPERFAMILY SSF46955 2 127 2.05E-34 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 Gene3D G3DSA:1.10.1660.10 1 126 1.1E-32 T 12-10-2018 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 2 128 4.4E-56 T 12-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 SMART SM00422 2 71 2.6E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 Pfam PF13411 MerR HTH family regulatory protein 2 68 3.8E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 9.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 9.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02629 d02d0506491f76212ec6cbd1092c7ebe 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 9.6E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02366 bd2a8ad664a0e839f2645e29b7f8c32b 225 Gene3D G3DSA:1.10.3720.10 1 218 9.4E-50 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02366 bd2a8ad664a0e839f2645e29b7f8c32b 225 SUPERFAMILY SSF161098 12 203 1.83E-42 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02366 bd2a8ad664a0e839f2645e29b7f8c32b 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 2.1E-23 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A02366 bd2a8ad664a0e839f2645e29b7f8c32b 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.7E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 279 1.9E-72 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 SUPERFAMILY SSF48179 92 188 1.87E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 Gene3D G3DSA:3.40.50.720 1 94 3.1E-26 T 12-10-2018 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 69 2.5E-9 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 SMART SM00984 201 288 6.6E-16 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 SUPERFAMILY SSF52413 184 289 4.32E-29 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 Gene3D G3DSA:1.20.5.100 95 122 5.2E-20 T 12-10-2018 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 93 181 3.2E-25 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 202 276 2.4E-9 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 Gene3D G3DSA:3.40.50.720 123 289 1.8E-65 T 12-10-2018 vfu_A00116 3c20b401484bcd20de39aa6c5706b431 289 SUPERFAMILY SSF51735 2 95 4.59E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 Gene3D G3DSA:3.55.50.10 103 194 3.2E-52 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 SUPERFAMILY SSF69279 18 187 4.04E-34 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 Gene3D G3DSA:3.30.1920.30 226 292 3.2E-52 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 SUPERFAMILY SSF69279 207 364 1.26E-10 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 SUPERFAMILY SSF69349 439 597 5.41E-30 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 SUPERFAMILY SSF69255 363 448 1.2E-26 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 Gene3D G3DSA:2.30.110.50 23 336 3.2E-52 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 17 513 1.5E-122 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 Gene3D G3DSA:2.40.50.230 356 453 4.0E-35 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 Pfam PF05954 Phage late control gene D protein (GPD) 30 336 8.2E-47 T 12-10-2018 vfu_B00799 5bbac082ae2658d82de73cf907bfe2ab 687 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 496 3.8E-91 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Pfam PF08448 PAS fold 2 97 4.9E-7 T 12-10-2018 IPR013656 PAS fold-4 vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Pfam PF13188 PAS domain 110 155 6.8E-5 T 12-10-2018 IPR000014 PAS domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 SUPERFAMILY SSF55785 3 96 1.56E-8 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Pfam PF00563 EAL domain 405 639 2.0E-73 T 12-10-2018 IPR001633 EAL domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Gene3D G3DSA:3.30.70.270 232 394 1.1E-50 T 12-10-2018 vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Gene3D G3DSA:3.30.450.20 107 230 1.8E-5 T 12-10-2018 vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 SUPERFAMILY SSF55785 93 168 3.24E-6 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 232 385 3.3E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Gene3D G3DSA:3.20.20.450 399 653 2.3E-95 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 98 1.1E-7 T 12-10-2018 IPR000014 PAS domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 SUPERFAMILY SSF141868 405 653 4.05E-85 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 SUPERFAMILY SSF55073 236 390 4.39E-47 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 384 3.9E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 SMART SM00267 220 388 9.4E-61 T 12-10-2018 IPR000160 GGDEF domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 SMART SM00052 398 644 1.5E-107 T 12-10-2018 IPR001633 EAL domain vfu_A00950 829894143b1a9a8f815bb0794c7c44db 659 Gene3D G3DSA:3.30.450.20 1 106 7.3E-13 T 12-10-2018 vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 243 2.7E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.1E-45 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.9E-108 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 259 5.5E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 Pfam PF00460 Flagella basal body rod protein 7 35 1.7E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A02260 89fb7bb314c3421e1695e6b01dee6279 261 SUPERFAMILY SSF117143 93 222 5.75E-35 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SMART SM00091 857 922 1.7E-4 T 12-10-2018 IPR000014 PAS domain vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SUPERFAMILY SSF52172 701 832 7.83E-41 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Pfam PF00989 PAS fold 860 906 6.8E-5 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Gene3D G3DSA:3.30.450.20 847 937 2.2E-7 T 12-10-2018 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SMART SM00387 557 668 5.1E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Pfam PF00672 HAMP domain 362 410 3.4E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SUPERFAMILY SSF55785 845 909 4.71E-7 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Pfam PF00072 Response regulator receiver domain 709 819 2.1E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Gene3D G3DSA:1.10.8.500 359 408 3.7E-17 T 12-10-2018 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 646 3.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 3.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 665 3.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 3.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 558 666 6.0E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Gene3D G3DSA:3.30.450.20 235 341 2.6E-7 T 12-10-2018 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Gene3D G3DSA:3.30.565.10 509 672 3.3E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SUPERFAMILY SSF158472 361 411 4.32E-11 T 12-10-2018 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SMART SM00304 360 413 2.4E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Gene3D G3DSA:1.10.287.130 409 508 3.6E-22 T 12-10-2018 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Gene3D G3DSA:3.40.50.2300 706 846 2.2E-40 T 12-10-2018 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SMART SM00448 706 819 1.1E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SUPERFAMILY SSF55874 499 670 1.1E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 Pfam PF00512 His Kinase A (phospho-acceptor) domain 443 508 1.0E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SUPERFAMILY SSF47384 427 511 1.06E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00916 b53d321b99b01bfc5be6e6a3e2cbfe4b 1113 SMART SM00388 442 510 6.1E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.74 T 12-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 Gene3D G3DSA:1.10.3860.10 3 404 1.7E-71 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 5.4E-15 T 12-10-2018 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 5.4E-15 T 12-10-2018 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 5.4E-15 T 12-10-2018 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 5.4E-15 T 12-10-2018 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 5.4E-15 T 12-10-2018 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 Pfam PF00375 Sodium:dicarboxylate symporter family 15 397 3.8E-66 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 vfu_B01044 5041e3d6902494bf8357d05c30c9f603 405 SUPERFAMILY SSF118215 15 398 3.4E-97 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.708 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 102 7.3E-26 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 SUPERFAMILY SSF54211 1 103 7.08E-28 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 Gene3D G3DSA:3.30.230.10 1 107 2.4E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 3.0E-41 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 45 59 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 vfu_A00318 3b3a0b80ac4deac9bff137275519f879 107 Pfam PF00825 Ribonuclease P 1 101 1.4E-30 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Gene3D G3DSA:3.30.565.10 5 219 5.2E-75 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 SUPERFAMILY SSF54211 238 493 5.16E-101 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 SUPERFAMILY SSF110942 520 632 2.48E-33 T 12-10-2018 IPR037196 HSP90, C-terminal domain vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 1.1E-62 T 12-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 188 3.1E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Gene3D G3DSA:3.40.50.11260 410 501 5.5E-36 T 12-10-2018 vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Gene3D G3DSA:1.20.120.790 502 632 2.7E-42 T 12-10-2018 IPR037196 HSP90, C-terminal domain vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 SMART SM00387 32 189 4.5E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 PIRSF PIRSF002583 1 635 8.1E-214 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Gene3D G3DSA:3.30.230.80 237 409 1.4E-69 T 12-10-2018 vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.454 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 Pfam PF00183 Hsp90 protein 229 632 4.2E-128 T 12-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 SUPERFAMILY SSF55874 10 217 4.32E-65 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02615 ab38795fac92970f7c29f7dd4877d7cc 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 12-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Hamap MF_01961 Catalase-peroxidase [katG]. 2 711 39.542 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Gene3D G3DSA:1.10.520.10 420 710 4.5E-148 T 12-10-2018 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 8 710 0.0 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 13 35 1.5E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 39 52 1.5E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 54 79 1.5E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 254 277 1.5E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 465 491 1.5E-53 T 12-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Gene3D G3DSA:1.10.520.10 7 419 3.9E-218 T 12-10-2018 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Gene3D G3DSA:1.10.420.10 565 686 4.5E-148 T 12-10-2018 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00458 Haem peroxidase superfamily signature 137 154 2.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00458 Haem peroxidase superfamily signature 155 167 2.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00458 Haem peroxidase superfamily signature 77 91 2.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00458 Haem peroxidase superfamily signature 246 261 2.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 PRINTS PR00458 Haem peroxidase superfamily signature 305 320 2.4E-18 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 SUPERFAMILY SSF48113 419 709 4.27E-112 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Gene3D G3DSA:1.10.420.20 178 386 3.9E-218 T 12-10-2018 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Pfam PF00141 Peroxidase 56 384 3.7E-51 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 Pfam PF00141 Peroxidase 393 685 1.3E-36 T 12-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 ProSitePatterns PS00436 Peroxidases active site signature. 77 88 - T 12-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 vfu_A02021 6348c0ba2d5ddc28fff0909be3e5ed00 711 SUPERFAMILY SSF48113 5 418 2.36E-152 T 12-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 SUPERFAMILY SSF55874 329 479 1.01E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 Gene3D G3DSA:3.30.565.10 332 483 1.7E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 SUPERFAMILY SSF47384 243 321 1.86E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 Gene3D G3DSA:1.10.287.130 206 324 5.5E-12 T 12-10-2018 vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 260 320 3.7E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 SMART SM00388 258 324 6.5E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 Pfam PF14501 GHKL domain 373 468 2.7E-5 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain vfu_A02023 428c217a911d0b201dbb5d950a2ce57a 488 SMART SM00387 369 481 2.3E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01791 3bcb13c3e94c7e37639f30a05a0b612b 292 SUPERFAMILY SSF103481 45 134 8.76E-6 T 12-10-2018 vfu_A01791 3bcb13c3e94c7e37639f30a05a0b612b 292 Pfam PF00892 EamA-like transporter family 146 275 1.0E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A01791 3bcb13c3e94c7e37639f30a05a0b612b 292 SUPERFAMILY SSF103481 185 280 2.35E-7 T 12-10-2018 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 Gene3D G3DSA:3.20.20.70 1 462 1.2E-170 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 Pfam PF00682 HMGL-like 6 270 7.7E-58 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 SUPERFAMILY SSF89000 297 457 9.02E-51 T 12-10-2018 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 SUPERFAMILY SSF51230 515 593 3.01E-20 T 12-10-2018 IPR011053 Single hybrid motif vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 Pfam PF00364 Biotin-requiring enzyme 528 592 1.7E-16 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 Pfam PF02436 Conserved carboxylase domain 292 492 2.7E-58 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 SUPERFAMILY SSF51569 1 300 1.28E-87 T 12-10-2018 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 550 567 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 Gene3D G3DSA:2.40.50.100 518 594 5.1E-22 T 12-10-2018 vfu_A02972 05683a2c81f75d221b840d545cb3df35 594 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 588 1.5E-265 T 12-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 SUPERFAMILY SSF53850 94 293 8.87E-21 T 12-10-2018 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 Gene3D G3DSA:1.10.10.10 2 85 4.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 Gene3D G3DSA:3.40.190.290 89 296 1.3E-64 T 12-10-2018 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 1.3E-104 T 12-10-2018 IPR017685 HTH-type transcriptional regulator ArgP vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 SUPERFAMILY SSF46785 4 112 3.63E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A03031 47d4ae6f641436197bbcfb3def154da6 298 Pfam PF03466 LysR substrate binding domain 95 263 2.9E-16 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00612 05133720bd200a188f48b716179be33e 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 3.2E-43 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00612 05133720bd200a188f48b716179be33e 324 Gene3D G3DSA:3.30.930.10 1 324 7.0E-107 T 12-10-2018 vfu_A00612 05133720bd200a188f48b716179be33e 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 7.6E-127 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 vfu_A00612 05133720bd200a188f48b716179be33e 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 52.797 T 12-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 vfu_A00612 05133720bd200a188f48b716179be33e 324 SUPERFAMILY SSF55681 11 322 1.15E-80 T 12-10-2018 vfu_B00295 c086c8190ee9853f065acd0fda6afbde 145 SUPERFAMILY SSF158675 1 145 1.01E-49 T 12-10-2018 IPR023132 Sama2622-like superfamily vfu_B00295 c086c8190ee9853f065acd0fda6afbde 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 143 1.0E-50 T 12-10-2018 IPR021422 Protein of unknown function DUF3069 vfu_B00295 c086c8190ee9853f065acd0fda6afbde 145 Gene3D G3DSA:1.10.3440.10 9 144 2.2E-5 T 12-10-2018 IPR023132 Sama2622-like superfamily vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.7E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 SUPERFAMILY SSF46946 2 114 6.77E-45 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 PIRSF PIRSF002134 1 118 1.5E-41 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 Gene3D G3DSA:1.10.8.50 1 71 5.6E-27 T 12-10-2018 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.623 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00689 2af904cf177250b2aa43de70f09cd87f 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.0E-31 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 Gene3D G3DSA:3.60.120.10 8 521 1.0E-183 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 197 2.4E-12 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 8.8E-228 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 Pfam PF00425 chorismate binding enzyme 247 507 6.3E-86 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal vfu_A02218 68fd82074b35527070b69bca0330ba23 521 SUPERFAMILY SSF56322 15 518 6.93E-161 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 PIRSF PIRSF001373 3 521 1.1E-254 T 12-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 464 478 5.1E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 449 463 5.1E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 355 368 5.1E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02218 68fd82074b35527070b69bca0330ba23 521 PRINTS PR00095 Anthranilate synthase component I signature 369 382 5.1E-23 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A00140 be3c959a668c8ab686e96258b73331c2 317 SUPERFAMILY SSF53448 1 200 3.94E-6 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00140 be3c959a668c8ab686e96258b73331c2 317 Gene3D G3DSA:3.40.50.1000 206 305 6.6E-5 T 12-10-2018 IPR023214 HAD superfamily vfu_A00140 be3c959a668c8ab686e96258b73331c2 317 Gene3D G3DSA:3.90.550.10 1 205 5.4E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01218 fe0fca60266797bb32daacb095830136 177 Pfam PF14539 Domain of unknown function (DUF4442) 14 151 1.7E-23 T 12-10-2018 IPR027961 Protein of unknown function DUF4442 vfu_A01218 fe0fca60266797bb32daacb095830136 177 SUPERFAMILY SSF54637 11 156 9.33E-23 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A01218 fe0fca60266797bb32daacb095830136 177 Gene3D G3DSA:3.10.129.10 12 157 2.9E-26 T 12-10-2018 vfu_A01155 2441cf75640121ec61adf1d1cfea6fa9 477 Pfam PF01435 Peptidase family M48 63 245 5.7E-28 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 vfu_A01155 2441cf75640121ec61adf1d1cfea6fa9 477 Pfam PF14559 Tetratricopeptide repeat 345 408 1.9E-9 T 12-10-2018 vfu_A01155 2441cf75640121ec61adf1d1cfea6fa9 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 11 476 39.774 T 12-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 vfu_A01155 2441cf75640121ec61adf1d1cfea6fa9 477 Gene3D G3DSA:3.30.2010.10 69 141 1.2E-6 T 12-10-2018 vfu_A01155 2441cf75640121ec61adf1d1cfea6fa9 477 Gene3D G3DSA:1.25.40.10 246 465 6.7E-18 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01155 2441cf75640121ec61adf1d1cfea6fa9 477 SUPERFAMILY SSF48452 303 448 1.44E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00570 caf5b4861e134280d2477b238dbc5178 128 Gene3D G3DSA:1.20.120.10 22 118 3.2E-8 T 12-10-2018 vfu_B00570 caf5b4861e134280d2477b238dbc5178 128 SUPERFAMILY SSF47175 23 118 4.83E-24 T 12-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 vfu_B00570 caf5b4861e134280d2477b238dbc5178 128 Pfam PF07361 Cytochrome b562 23 118 1.7E-27 T 12-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 vfu_B01066 c37702bd50ae57d7b0dee9c969cf5165 308 SUPERFAMILY SSF141523 95 230 2.88E-29 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like vfu_B01066 c37702bd50ae57d7b0dee9c969cf5165 308 Pfam PF01476 LysM domain 40 83 3.1E-7 T 12-10-2018 IPR018392 LysM domain vfu_B01066 c37702bd50ae57d7b0dee9c969cf5165 308 Pfam PF03734 L,D-transpeptidase catalytic domain 96 230 2.6E-22 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 vfu_B01066 c37702bd50ae57d7b0dee9c969cf5165 308 SMART SM00257 39 83 4.1E-5 T 12-10-2018 IPR018392 LysM domain vfu_B01066 c37702bd50ae57d7b0dee9c969cf5165 308 Gene3D G3DSA:2.40.440.10 19 298 9.0E-84 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like vfu_B01066 c37702bd50ae57d7b0dee9c969cf5165 308 SUPERFAMILY SSF54106 38 83 4.05E-7 T 12-10-2018 vfu_A02847 a52b8f5b3a753040fdde99ea29da4b17 114 Pfam PF01588 Putative tRNA binding domain 18 111 6.9E-27 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 vfu_A02847 a52b8f5b3a753040fdde99ea29da4b17 114 SUPERFAMILY SSF50249 11 113 8.32E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02847 a52b8f5b3a753040fdde99ea29da4b17 114 Gene3D G3DSA:2.40.50.140 6 114 1.8E-33 T 12-10-2018 vfu_A00063 377c0bf4a4693d82c11c9858d3e0c3a7 393 SUPERFAMILY SSF103473 7 373 1.7E-37 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A00063 377c0bf4a4693d82c11c9858d3e0c3a7 393 Gene3D G3DSA:1.20.1250.20 3 188 2.0E-17 T 12-10-2018 vfu_A00063 377c0bf4a4693d82c11c9858d3e0c3a7 393 Gene3D G3DSA:1.20.1250.20 195 381 3.9E-35 T 12-10-2018 vfu_A00063 377c0bf4a4693d82c11c9858d3e0c3a7 393 PIRSF PIRSF004925 2 386 1.1E-104 T 12-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter vfu_A00063 377c0bf4a4693d82c11c9858d3e0c3a7 393 Pfam PF12832 MFS_1 like family 13 361 4.3E-44 T 12-10-2018 IPR024989 Major facilitator superfamily associated domain vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 Gene3D G3DSA:3.40.50.720 5 312 1.3E-100 T 12-10-2018 vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 8.0E-24 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 Gene3D G3DSA:3.40.50.720 97 287 1.3E-100 T 12-10-2018 vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 SUPERFAMILY SSF51735 100 288 1.25E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 SUPERFAMILY SSF52283 1 134 1.23E-27 T 12-10-2018 vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 vfu_B00592 237b98920e672f3a6586a5b1f8440af6 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 287 5.6E-59 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Gene3D G3DSA:3.90.650.10 144 320 3.4E-49 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 PIRSF PIRSF005303 1 320 1.3E-82 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 2.0E-21 T 12-10-2018 IPR016188 PurM-like, N-terminal domain vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 SUPERFAMILY SSF55326 3 137 3.66E-34 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Gene3D G3DSA:3.30.1330.10 1 143 6.2E-42 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 8.5E-103 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.731 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 299 8.3E-9 T 12-10-2018 IPR010918 PurM-like, C-terminal domain vfu_A01064 3aeaf93fb46a59ab06f5ef4a8bdb33cc 324 SUPERFAMILY SSF56042 142 302 1.2E-34 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF50249 1 105 1.73E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:3.30.1360.30 271 420 4.7E-196 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF55681 108 583 2.87E-103 T 12-10-2018 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Pfam PF02938 GAD domain 307 406 3.3E-32 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.2E-15 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 SUPERFAMILY SSF55261 288 419 7.36E-47 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:2.40.50.140 1 106 1.1E-34 T 12-10-2018 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 5.0E-264 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 8.6E-106 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.137 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 Gene3D G3DSA:3.30.930.10 118 578 4.7E-196 T 12-10-2018 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01637 d1c93803adcc722a623b5f45392392c4 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 1 641 1.4E-272 T 12-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Gene3D G3DSA:2.60.40.1840 218 319 1.7E-37 T 12-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 218 319 1.0E-33 T 12-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Gene3D G3DSA:1.10.390.10 54 217 2.0E-64 T 12-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Gene3D G3DSA:1.25.50.10 320 642 1.8E-114 T 12-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Pfam PF01433 Peptidase family M1 domain 6 210 1.8E-53 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Gene3D G3DSA:1.10.1740.60 1 53 3.7E-25 T 12-10-2018 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 SUPERFAMILY SSF55486 3 224 1.95E-68 T 12-10-2018 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 322 642 1.4E-112 T 12-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 87 99 3.6E-6 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 32 42 3.6E-6 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 vfu_A01932 cedeffa349eeacaebc3fe8fb2e1c7b98 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 68 83 3.6E-6 T 12-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 SUPERFAMILY SSF51905 204 516 6.79E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 354 378 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 317 325 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 406 422 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 480 498 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 339 351 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 445 466 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 1.4E-60 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 SUPERFAMILY SSF52833 104 197 6.66E-24 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B01419 a19c3251184c802d40e95aa61493380d 522 Gene3D G3DSA:3.40.30.80 1 200 4.2E-66 T 12-10-2018 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 Gene3D G3DSA:3.50.50.60 213 510 3.8E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01419 a19c3251184c802d40e95aa61493380d 522 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 506 8.7E-43 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 Gene3D G3DSA:3.50.50.60 328 451 3.8E-104 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01419 a19c3251184c802d40e95aa61493380d 522 Pfam PF13192 Thioredoxin domain 120 195 2.4E-12 T 12-10-2018 IPR012336 Thioredoxin-like fold vfu_B01419 a19c3251184c802d40e95aa61493380d 522 SUPERFAMILY SSF52833 1 101 8.83E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 316 334 7.0E-35 T 12-10-2018 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 7.0E-35 T 12-10-2018 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 443 459 7.0E-35 T 12-10-2018 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 470 492 7.0E-35 T 12-10-2018 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 376 7.0E-35 T 12-10-2018 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 PIRSF PIRSF000238 1 522 4.9E-257 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 520 3.5E-252 T 12-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 vfu_B01419 a19c3251184c802d40e95aa61493380d 522 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 346 366 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 434 3.5E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 141 263 1.0E-11 T 12-10-2018 IPR000014 PAS domain vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 35 139 2.3E-7 T 12-10-2018 IPR000014 PAS domain vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 Gene3D G3DSA:3.30.450.20 131 250 1.8E-18 T 12-10-2018 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 Pfam PF13426 PAS domain 37 134 3.1E-8 T 12-10-2018 IPR000014 PAS domain vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 SUPERFAMILY SSF55785 35 134 1.41E-11 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 Gene3D G3DSA:3.30.450.20 29 130 7.8E-11 T 12-10-2018 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 SUPERFAMILY SSF55785 154 259 2.09E-18 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 SMART SM00283 248 435 3.4E-17 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 Pfam PF08447 PAS fold 166 252 1.4E-11 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 SUPERFAMILY SSF58104 249 435 2.49E-51 T 12-10-2018 vfu_A02034 60318da5492081d4dfd6158f40d6384d 438 Gene3D G3DSA:1.10.287.950 251 438 1.7E-42 T 12-10-2018 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 Pfam PF04397 LytTr DNA-binding domain 143 235 2.2E-24 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 Gene3D G3DSA:2.40.50.1020 142 237 4.2E-12 T 12-10-2018 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 SMART SM00850 142 236 3.7E-27 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 Pfam PF00072 Response regulator receiver domain 5 112 9.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 SMART SM00448 2 112 5.2E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 Gene3D G3DSA:3.40.50.2300 1 127 2.6E-32 T 12-10-2018 vfu_A00991 8954f178fda0be3b55e5b3b72fbda697 238 SUPERFAMILY SSF52172 1 124 1.27E-31 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00593 77105793217096e2c4559669c7306a8f 571 SUPERFAMILY SSF53850 115 569 2.71E-51 T 12-10-2018 vfu_B00593 77105793217096e2c4559669c7306a8f 571 Gene3D G3DSA:3.10.105.10 363 540 1.2E-9 T 12-10-2018 vfu_B00593 77105793217096e2c4559669c7306a8f 571 Pfam PF12793 Sugar transport-related sRNA regulator N-term 17 101 6.2E-15 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain vfu_B00593 77105793217096e2c4559669c7306a8f 571 Gene3D G3DSA:3.40.190.10 120 315 6.3E-23 T 12-10-2018 vfu_B00593 77105793217096e2c4559669c7306a8f 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 484 2.4E-16 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_B00517 99a04f7c8741501a2b7b47dbf484cece 302 Pfam PF00248 Aldo/keto reductase family 16 291 7.5E-58 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain vfu_B00517 99a04f7c8741501a2b7b47dbf484cece 302 SUPERFAMILY SSF51430 6 293 1.83E-68 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily vfu_B00517 99a04f7c8741501a2b7b47dbf484cece 302 Gene3D G3DSA:3.20.20.100 1 302 1.9E-98 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily vfu_B00517 99a04f7c8741501a2b7b47dbf484cece 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 3.1E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B00517 99a04f7c8741501a2b7b47dbf484cece 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 3.1E-5 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 SMART SM01097 1 116 3.6E-74 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 361 44.481 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 Gene3D G3DSA:3.40.50.880 135 361 1.1E-76 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 SUPERFAMILY SSF52021 2 125 3.27E-50 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 219 228 3.1E-11 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 247 258 3.1E-11 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 332 345 3.1E-11 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 Gene3D G3DSA:3.50.30.20 1 134 2.5E-54 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 247 263 4.5E-40 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 216 230 4.5E-40 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 281 4.5E-40 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 177 191 4.5E-40 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 289 300 4.5E-40 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 115 1.5E-46 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 2 358 2.5E-144 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 Pfam PF00117 Glutamine amidotransferase class-I 180 355 9.2E-49 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00097 Anthranilate synthase component II signature 247 258 9.9E-6 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00097 Anthranilate synthase component II signature 219 228 9.9E-6 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 PRINTS PR00097 Anthranilate synthase component II signature 332 345 9.9E-6 T 12-10-2018 vfu_A02922 70c91251e40fd37458e24754d9eb6106 362 SUPERFAMILY SSF52317 136 360 1.15E-64 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Pfam PF00990 Diguanylate cyclase, GGDEF domain 564 716 2.7E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SMART SM00086 511 553 8.7E-12 T 12-10-2018 IPR001610 PAC motif vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Gene3D G3DSA:3.40.50.2300 2 254 1.7E-41 T 12-10-2018 vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 561 720 3.0E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SUPERFAMILY SSF55073 569 724 5.1E-47 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 437 557 2.2E-11 T 12-10-2018 IPR000014 PAS domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SMART SM00052 732 977 9.9E-89 T 12-10-2018 IPR001633 EAL domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Gene3D G3DSA:3.40.50.2300 91 259 1.7E-41 T 12-10-2018 vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SMART SM00091 437 505 0.0055 T 12-10-2018 IPR000014 PAS domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Pfam PF00563 EAL domain 743 972 3.3E-67 T 12-10-2018 IPR001633 EAL domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Gene3D G3DSA:3.30.70.270 558 734 8.8E-57 T 12-10-2018 vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Pfam PF08447 PAS fold 461 546 9.4E-14 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SUPERFAMILY SSF53822 4 264 2.94E-39 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Gene3D G3DSA:3.20.20.450 735 986 4.3E-84 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Gene3D G3DSA:3.30.450.20 430 549 9.4E-26 T 12-10-2018 vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SUPERFAMILY SSF55785 442 554 3.14E-22 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 Pfam PF13377 Periplasmic binding protein-like domain 102 262 2.7E-30 T 12-10-2018 vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SMART SM00267 553 722 1.0E-54 T 12-10-2018 IPR000160 GGDEF domain vfu_B01466 c4a38cc67b7e32f96cebec4bb016eb15 993 SUPERFAMILY SSF141868 738 984 7.45E-77 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 5.5E-10 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 178 1.2E-42 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 SUPERFAMILY SSF50891 18 180 9.2E-52 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 Gene3D G3DSA:2.40.100.10 18 181 8.1E-57 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 PIRSF PIRSF001467 6 181 1.4E-23 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 vfu_A01024 90415a16283d4cec7953de7cc765a0ec 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 SUPERFAMILY SSF54292 3 86 2.16E-17 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 72 1.7E-5 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 SUPERFAMILY SSF56176 180 348 8.72E-43 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 358 458 4.3E-24 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 PIRSF PIRSF036557 1 469 1.6E-142 T 12-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Pfam PF01799 [2Fe-2S] binding domain 82 152 5.2E-26 T 12-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 SMART SM01092 357 459 1.0E-23 T 12-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Gene3D G3DSA:3.30.465.10 187 350 1.1E-43 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Gene3D G3DSA:1.10.150.120 86 186 2.0E-27 T 12-10-2018 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 SUPERFAMILY SSF55447 354 461 1.31E-24 T 12-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 185 349 4.0E-40 T 12-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 SUPERFAMILY SSF47741 93 159 5.23E-25 T 12-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Gene3D G3DSA:3.30.390.50 352 463 7.7E-23 T 12-10-2018 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 4 458 2.6E-143 T 12-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 vfu_B00189 6d09223f7c9f7bae1c17250b63b748ea 470 Gene3D G3DSA:3.10.20.30 1 85 1.4E-26 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 5.3E-18 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 SUPERFAMILY SSF56935 26 718 4.76E-87 T 12-10-2018 vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 Gene3D G3DSA:2.40.170.20 165 718 1.9E-46 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 718 2.8E-85 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 Pfam PF00593 TonB dependent receptor 242 717 1.3E-26 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 701 718 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site vfu_B00454 2b5acf2a0ee5a3b0d49757bbe4f1e900 718 Gene3D G3DSA:2.170.130.10 25 162 5.2E-23 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_A01481 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site vfu_A01481 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 Pfam PF00550 Phosphopantetheine attachment site 8 53 6.2E-6 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01481 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 SUPERFAMILY SSF47336 5 79 1.02E-9 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01481 278e2c1f65cb4e4dfb3a4e7f1f69cfe4 92 Gene3D G3DSA:1.10.1200.10 2 77 6.3E-11 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Pfam PF00672 HAMP domain 190 237 2.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 SMART SM00388 243 305 1.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 SUPERFAMILY SSF47384 228 304 9.61E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 8.5E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Gene3D G3DSA:3.30.565.10 309 458 4.1E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 SMART SM00304 189 242 1.5E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 303 3.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Gene3D G3DSA:1.10.287.130 193 306 6.7E-33 T 12-10-2018 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 167 8.1E-60 T 12-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 Gene3D G3DSA:3.30.450.210 31 156 1.0E-51 T 12-10-2018 IPR038515 CpxA, periplasmic domain superfamily vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 SUPERFAMILY SSF55874 295 457 2.23E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.9E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00572 7ce0850f4495a600b51310002b4efadb 459 SMART SM00387 349 459 1.5E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00617 ab35c5cb920b48257c676e3fadf8321f 195 Gene3D G3DSA:1.10.10.10 17 105 1.0E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00617 ab35c5cb920b48257c676e3fadf8321f 195 SUPERFAMILY SSF46785 19 194 2.39E-44 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00617 ab35c5cb920b48257c676e3fadf8321f 195 Pfam PF10400 Virulence activator alpha C-term 108 192 4.4E-14 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal vfu_A00617 ab35c5cb920b48257c676e3fadf8321f 195 Pfam PF03551 Transcriptional regulator PadR-like family 23 96 7.3E-15 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 Pfam PF01047 MarR family 31 89 4.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 SUPERFAMILY SSF46785 5 140 2.08E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 Gene3D G3DSA:1.10.10.10 2 137 9.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 SMART SM00347 24 124 1.1E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.8E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.8E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01760 188740c04ce8a89bf4cb6fea8f806cc8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.8E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 SUPERFAMILY SSF46604 94 140 1.36E-11 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 139 2.3E-37 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 15 93 1.0E-25 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 Gene3D G3DSA:2.60.15.10 8 96 1.9E-25 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 SUPERFAMILY SSF51344 8 92 2.49E-20 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 Gene3D G3DSA:1.20.5.440 97 140 2.8E-15 T 12-10-2018 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 94 138 3.7E-11 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 8 137 20.59 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01325 49dcfc65c71c768bcad119814de0b7b9 146 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 90 1.0E-24 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B00009 d3d5a300d39becd6693474e2b88d3bd7 96 Gene3D G3DSA:3.30.2310.20 1 95 2.0E-29 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily vfu_B00009 d3d5a300d39becd6693474e2b88d3bd7 96 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 4.4E-11 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family vfu_B00009 d3d5a300d39becd6693474e2b88d3bd7 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 2.5E-13 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family vfu_B00009 d3d5a300d39becd6693474e2b88d3bd7 96 SUPERFAMILY SSF143011 1 82 3.92E-23 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 6 787 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 344 1.1E-117 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 SUPERFAMILY SSF56059 1 382 1.18E-107 T 12-10-2018 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Gene3D G3DSA:3.30.1490.20 1 192 4.3E-72 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Gene3D G3DSA:3.50.30.10 358 476 4.1E-41 T 12-10-2018 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 SUPERFAMILY SSF52009 348 466 8.63E-35 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 1.9E-26 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 SUPERFAMILY SSF51621 461 787 2.06E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 780 1.2E-61 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Gene3D G3DSA:3.30.470.20 193 356 6.1E-58 T 12-10-2018 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 6.5E-6 T 12-10-2018 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 6.5E-6 T 12-10-2018 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 6.5E-6 T 12-10-2018 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 PIRSF PIRSF000854 1 790 0.0 T 12-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 vfu_B00818 7990f2fa1ce454ff6845ff135cc4b532 790 Gene3D G3DSA:3.20.20.60 477 786 4.8E-103 T 12-10-2018 vfu_A02960 fbc9a8d8e32e1685254cade2f5b9a026 82 Pfam PF00886 Ribosomal protein S16 8 68 7.5E-23 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02960 fbc9a8d8e32e1685254cade2f5b9a026 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 12-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02960 fbc9a8d8e32e1685254cade2f5b9a026 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.761 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02960 fbc9a8d8e32e1685254cade2f5b9a026 82 Gene3D G3DSA:3.30.1320.10 1 82 9.3E-31 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02960 fbc9a8d8e32e1685254cade2f5b9a026 82 SUPERFAMILY SSF54565 1 76 1.7E-27 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02960 fbc9a8d8e32e1685254cade2f5b9a026 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 1.2E-26 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 Gene3D G3DSA:3.90.650.10 1 71 1.2E-12 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 Gene3D G3DSA:3.40.50.880 444 763 9.3E-139 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 Pfam PF02769 AIR synthase related protein, C-terminal domain 296 429 2.6E-14 T 12-10-2018 IPR010918 PurM-like, C-terminal domain vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 Gene3D G3DSA:3.30.1330.10 72 267 4.3E-25 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 SUPERFAMILY SSF55326 75 272 6.28E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 SMART SM01211 507 762 4.7E-157 T 12-10-2018 vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 Gene3D G3DSA:3.90.650.10 278 443 8.6E-31 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 SUPERFAMILY SSF56042 287 496 5.08E-55 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 507 760 2.7E-106 T 12-10-2018 vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 SUPERFAMILY SSF56042 4 111 7.33E-18 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 761 0.0 T 12-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A02712 d49223bc6dfee11bdfbeb107503e872f 763 SUPERFAMILY SSF52317 504 761 1.57E-98 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF103190 212 305 3.37E-16 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.450.20 211 306 1.2E-13 T 12-10-2018 vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 466 621 3.6E-39 T 12-10-2018 IPR000160 GGDEF domain vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 Pfam PF13426 PAS domain 358 457 5.0E-6 T 12-10-2018 IPR000014 PAS domain vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 347 461 1.6E-9 T 12-10-2018 IPR000014 PAS domain vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.450.20 75 208 1.0E-33 T 12-10-2018 vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF55785 358 457 8.22E-10 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF103190 37 208 8.63E-41 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 SMART SM00267 458 623 9.7E-39 T 12-10-2018 IPR000160 GGDEF domain vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 471 618 2.5E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.70.270 458 623 8.5E-45 T 12-10-2018 vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 Gene3D G3DSA:3.30.450.20 344 457 2.0E-11 T 12-10-2018 vfu_A00568 ef3bc14b269063f43feff4f6e651634c 636 SUPERFAMILY SSF55073 475 621 2.35E-37 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00961 a6a302d087130723c48da334fa5f6783 476 Gene3D G3DSA:3.40.605.10 29 446 3.3E-147 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00961 a6a302d087130723c48da334fa5f6783 476 Pfam PF00171 Aldehyde dehydrogenase family 36 446 7.9E-88 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_B00961 a6a302d087130723c48da334fa5f6783 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 222 229 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_B00961 a6a302d087130723c48da334fa5f6783 476 PIRSF PIRSF036492 4 473 1.3E-150 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 vfu_B00961 a6a302d087130723c48da334fa5f6783 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 250 261 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_B00961 a6a302d087130723c48da334fa5f6783 476 Gene3D G3DSA:3.40.309.10 226 426 3.3E-147 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_B00961 a6a302d087130723c48da334fa5f6783 476 SUPERFAMILY SSF53720 10 448 5.63E-111 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 Pfam PF07196 Flagellin hook IN motif 196 249 4.9E-12 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.4E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 SUPERFAMILY SSF64518 1 376 5.23E-95 T 12-10-2018 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 PRINTS PR00207 Flagellin signature 37 54 9.0E-28 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 PRINTS PR00207 Flagellin signature 111 134 9.0E-28 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 PRINTS PR00207 Flagellin signature 76 95 9.0E-28 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 6.9E-25 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 Gene3D G3DSA:3.30.70.2120 174 275 9.1E-76 T 12-10-2018 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 Gene3D G3DSA:1.20.1330.10 44 327 9.1E-76 T 12-10-2018 vfu_A01134 5daf0d81a9408741da71b40740d0d843 377 Gene3D G3DSA:1.10.8.410 328 376 6.0E-20 T 12-10-2018 vfu_A02292 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 SUPERFAMILY SSF103473 16 423 6.93E-37 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02292 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 440 3.0E-108 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 vfu_A02292 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 Gene3D G3DSA:1.20.1250.20 13 418 9.5E-29 T 12-10-2018 vfu_A02292 f8c5bc29414e3b34a9c77ec5fcdcbc93 464 Pfam PF13347 MFS/sugar transport protein 13 432 2.0E-104 T 12-10-2018 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 SUPERFAMILY SSF55174 1 80 3.83E-12 T 12-10-2018 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 1.0E-47 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 Pfam PF00849 RNA pseudouridylate synthase 61 193 9.1E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 Gene3D G3DSA:3.10.290.10 1 61 2.1E-15 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 Gene3D G3DSA:3.30.70.1560 127 210 1.3E-55 T 12-10-2018 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 Gene3D G3DSA:3.30.70.580 62 228 1.3E-55 T 12-10-2018 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 SUPERFAMILY SSF55120 60 228 2.4E-43 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 Pfam PF01479 S4 domain 1 43 1.4E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A01712 0ab550b588a9dc3d8d6043a780f47526 233 SMART SM00363 1 62 2.2E-6 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02109 f5d15cf13f64bdd640c9370b8bd5438a 180 PIRSF PIRSF006135 2 179 3.6E-54 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 vfu_A02109 f5d15cf13f64bdd640c9370b8bd5438a 180 SUPERFAMILY SSF52540 3 177 5.0E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02109 f5d15cf13f64bdd640c9370b8bd5438a 180 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 2.9E-57 T 12-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 vfu_A02109 f5d15cf13f64bdd640c9370b8bd5438a 180 Gene3D G3DSA:3.40.50.300 3 177 1.4E-55 T 12-10-2018 vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily vfu_A00685 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain vfu_A02824 f37e75c35bb5f7a855e1f765dce514ee 199 Gene3D G3DSA:3.40.50.880 1 192 1.1E-50 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02824 f37e75c35bb5f7a855e1f765dce514ee 199 Pfam PF01965 DJ-1/PfpI family 3 169 2.2E-37 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 vfu_A02824 f37e75c35bb5f7a855e1f765dce514ee 199 SUPERFAMILY SSF52317 3 191 2.4E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02824 f37e75c35bb5f7a855e1f765dce514ee 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 182 2.5E-62 T 12-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.2E-30 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 SUPERFAMILY SSF81333 3 78 1.7E-19 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 Pfam PF00137 ATP synthase subunit C 10 72 1.3E-10 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00345 a909fcd6bbd97c2a817942ce1a3b8a03 84 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.7E-6 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 SUPERFAMILY SSF103473 214 477 1.22E-12 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 SUPERFAMILY SSF103473 3 200 3.4E-19 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 Gene3D G3DSA:1.20.1250.20 3 481 2.6E-111 T 12-10-2018 vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 Pfam PF00854 POT family 79 441 3.5E-79 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 480 7.4E-133 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 vfu_A02612 cfd0fcf1a31433e1896fce8ffef1996e 495 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 67 91 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 vfu_A01980 5c90b5697ec05a1f62ea3a940c7d6e46 195 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 194 31.442 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 vfu_A01980 5c90b5697ec05a1f62ea3a940c7d6e46 195 Pfam PF02525 Flavodoxin-like fold 3 192 3.1E-44 T 12-10-2018 IPR003680 Flavodoxin-like fold vfu_A01980 5c90b5697ec05a1f62ea3a940c7d6e46 195 SUPERFAMILY SSF52218 1 193 8.38E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01980 5c90b5697ec05a1f62ea3a940c7d6e46 195 Gene3D G3DSA:3.40.50.360 1 194 1.8E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B01418 2849e2b4bcc6c0228b306801d3b08610 452 Gene3D G3DSA:2.30.40.10 24 423 2.7E-124 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_B01418 2849e2b4bcc6c0228b306801d3b08610 452 Pfam PF01979 Amidohydrolase family 57 421 3.5E-57 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_B01418 2849e2b4bcc6c0228b306801d3b08610 452 Gene3D G3DSA:3.20.20.140 61 375 2.7E-124 T 12-10-2018 vfu_B01418 2849e2b4bcc6c0228b306801d3b08610 452 SUPERFAMILY SSF51556 60 374 7.71E-94 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_B01418 2849e2b4bcc6c0228b306801d3b08610 452 SUPERFAMILY SSF51338 6 448 1.03E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 SUPERFAMILY SSF53955 297 500 7.74E-36 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 49 514 48.394 T 12-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 Gene3D G3DSA:3.40.190.10 168 275 8.2E-71 T 12-10-2018 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 Pfam PF01464 Transglycosylase SLT domain 349 449 4.5E-21 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 SMART SM00062 83 319 4.7E-22 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 360 388 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 Gene3D G3DSA:3.40.190.10 77 314 8.2E-71 T 12-10-2018 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 SUPERFAMILY SSF53850 84 318 5.93E-36 T 12-10-2018 vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 84 318 8.4E-30 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02714 dc70fa163664ef4649f2a50e7f325321 559 Gene3D G3DSA:1.10.530.10 324 501 1.8E-33 T 12-10-2018 vfu_A00008 2f0ba57893e04c6ca834bdc993560db5 261 Gene3D G3DSA:3.10.50.40 148 260 6.0E-43 T 12-10-2018 vfu_A00008 2f0ba57893e04c6ca834bdc993560db5 261 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 165 251 3.4E-30 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain vfu_A00008 2f0ba57893e04c6ca834bdc993560db5 261 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 36 157 2.4E-33 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 vfu_A00008 2f0ba57893e04c6ca834bdc993560db5 261 Gene3D G3DSA:1.10.287.460 30 147 3.6E-31 T 12-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 vfu_A00008 2f0ba57893e04c6ca834bdc993560db5 261 SUPERFAMILY SSF54534 49 253 1.37E-62 T 12-10-2018 vfu_A01845 c9da009852734f45b50115d6002c686b 317 PIRSF PIRSF000102 1 317 3.7E-89 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 309 3.0E-25 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 SUPERFAMILY SSF56327 144 306 3.35E-43 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 SUPERFAMILY SSF51735 1 141 1.95E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01845 c9da009852734f45b50115d6002c686b 317 Gene3D G3DSA:3.90.110.10 145 314 5.5E-46 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 141 4.2E-30 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 Gene3D G3DSA:3.40.50.720 1 144 2.9E-38 T 12-10-2018 vfu_A01845 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 2.2E-20 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.2E-20 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 2.2E-20 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 2.2E-20 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A01845 c9da009852734f45b50115d6002c686b 317 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 2.2E-20 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82693 138 328 9.42E-22 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82866 294 498 1.96E-43 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82866 799 1036 1.11E-47 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 6.3E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:1.20.1640.10 509 1030 3.3E-269 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1038 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82714 185 269 5.36E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.2090.10 716 804 3.3E-269 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.70.1320 135 328 3.3E-269 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.70.1430 562 664 3.3E-269 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.2090.10 182 274 3.3E-269 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82714 716 800 6.67E-19 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 2.0E-245 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.70.1440 665 862 3.3E-269 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:1.20.1640.10 15 508 3.3E-269 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 Gene3D G3DSA:3.30.70.1430 42 812 3.3E-269 T 12-10-2018 vfu_A00178 236aa15270e5df401d8da3792aff8b12 1039 SUPERFAMILY SSF82693 46 128 4.97E-20 T 12-10-2018 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 Gene3D G3DSA:3.40.1010.10 2 120 2.6E-47 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 SUPERFAMILY SSF53790 12 232 5.63E-86 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.47 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 7.6E-29 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 Gene3D G3DSA:3.30.950.10 121 241 1.1E-44 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 PIRSF PIRSF005917 1 286 6.9E-108 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 vfu_A02941 6836d4829e757a4e1473e542f0b539d6 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 1.1E-101 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 12 439 2.4E-156 T 12-10-2018 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Pfam PF13361 UvrD-like helicase C-terminal domain 555 826 5.5E-16 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 13 1195 0.0 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 439 3.9E-58 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 10 1196 22.924 T 12-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Pfam PF12705 PD-(D/E)XK nuclease superfamily 971 1196 3.1E-8 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.40.50.300 448 862 1.3E-155 T 12-10-2018 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 SUPERFAMILY SSF52980 918 1196 1.61E-86 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:3.90.320.10 906 1202 7.8E-105 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:1.10.3170.10 160 352 2.4E-156 T 12-10-2018 vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 SUPERFAMILY SSF52540 18 858 4.38E-107 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02834 2a6125708aa04d5127d231d10eee8427 1214 Gene3D G3DSA:1.10.486.10 597 745 1.3E-155 T 12-10-2018 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.328 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 SUPERFAMILY SSF51726 1 354 5.06E-121 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.6E-140 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 Gene3D G3DSA:3.20.20.210 1 355 1.0E-158 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A00034 35db7887da50755b3df6ec2f2ed06a1e 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 2.7E-139 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 SUPERFAMILY SSF54713 55 137 7.19E-19 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:1.10.8.10 1 55 9.8E-26 T 12-10-2018 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 2.8E-105 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 SUPERFAMILY SSF46934 3 53 2.86E-18 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:3.30.479.20 56 139 1.8E-26 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 Gene3D G3DSA:1.10.286.20 184 223 3.5E-23 T 12-10-2018 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 SUPERFAMILY SSF54713 141 277 2.88E-46 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 77.427 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A01070 15f95695ceb28ee8693267eaf9308f5d 280 Pfam PF00889 Elongation factor TS 70 260 1.3E-62 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 Pfam PF00270 DEAD/DEAH box helicase 26 193 6.5E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 SUPERFAMILY SSF52540 73 353 1.95E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 Gene3D G3DSA:3.40.50.300 1 209 2.5E-75 T 12-10-2018 vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 Gene3D G3DSA:3.40.50.300 214 420 1.2E-45 T 12-10-2018 vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 SMART SM00490 257 338 2.4E-31 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 Pfam PF00271 Helicase conserved C-terminal domain 232 338 3.3E-27 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 SMART SM00487 20 219 6.8E-59 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A01441 de7c0fe1afad329d762749870a2f48e7 536 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 529 50.618 T 12-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 vfu_A01144 0a9da7610dfbcaa7f3bab1d54fd02935 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 4.5E-38 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB vfu_A01144 0a9da7610dfbcaa7f3bab1d54fd02935 127 PIRSF PIRSF005610 1 121 3.6E-18 T 12-10-2018 IPR007360 Invasion gene expression up-regulator, SirB vfu_A01182 6907df4f4edbdf32b7ea3a1f36e9f909 113 SUPERFAMILY SSF160214 17 109 3.14E-23 T 12-10-2018 IPR035924 FlaG-like superfamily vfu_A01182 6907df4f4edbdf32b7ea3a1f36e9f909 113 Gene3D G3DSA:3.30.160.170 3 110 3.4E-14 T 12-10-2018 IPR035924 FlaG-like superfamily vfu_A01182 6907df4f4edbdf32b7ea3a1f36e9f909 113 Pfam PF03646 FlaG protein 9 110 1.3E-24 T 12-10-2018 IPR005186 FlaG protein vfu_B00360 7c8249a883e176ea439e858e40eaf917 96 Gene3D G3DSA:3.40.1440.10 6 94 3.5E-27 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 vfu_B00360 7c8249a883e176ea439e858e40eaf917 96 SUPERFAMILY SSF82771 10 78 1.44E-11 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 vfu_B00360 7c8249a883e176ea439e858e40eaf917 96 Pfam PF01541 GIY-YIG catalytic domain 9 79 8.3E-14 T 12-10-2018 IPR000305 GIY-YIG endonuclease vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 27 51 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 Gene3D G3DSA:3.40.1190.20 1 306 1.4E-96 T 12-10-2018 IPR029056 Ribokinase-like vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.8E-72 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 SUPERFAMILY SSF53613 1 305 8.73E-84 T 12-10-2018 IPR029056 Ribokinase-like vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 PRINTS PR00990 Ribokinase signature 175 190 1.0E-7 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 PRINTS PR00990 Ribokinase signature 22 41 1.0E-7 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 PRINTS PR00990 Ribokinase signature 214 225 1.0E-7 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_A01509 a937e2e297bfe9f0961517ed5f469bbd 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_A00257 9687a931edc2431e80392d4ed69a91ac 219 Gene3D G3DSA:3.40.50.720 1 202 3.8E-80 T 12-10-2018 vfu_A00257 9687a931edc2431e80392d4ed69a91ac 219 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 192 6.2E-54 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 vfu_A00257 9687a931edc2431e80392d4ed69a91ac 219 SUPERFAMILY SSF51735 27 191 7.62E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 SUPERFAMILY SSF81891 120 402 3.14E-56 T 12-10-2018 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Pfam PF01743 Poly A polymerase head domain 3 122 9.3E-17 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Gene3D G3DSA:1.10.3090.10 122 403 4.3E-42 T 12-10-2018 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 404 52.382 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Gene3D G3DSA:3.30.460.10 1 121 8.0E-28 T 12-10-2018 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 PIRSF PIRSF000813 1 404 3.8E-198 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 43.012 T 12-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Pfam PF01966 HD domain 231 346 5.0E-8 T 12-10-2018 IPR006674 HD domain vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 SUPERFAMILY SSF81301 2 119 3.16E-30 T 12-10-2018 vfu_A00847 6cd353340e20eadc55409b35a8f6ab8d 404 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 5.6E-13 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 vfu_A02271 316d0fde928bca87621d8714edcc68cc 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 17 253 3.8E-59 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 vfu_A02271 316d0fde928bca87621d8714edcc68cc 258 Pfam PF01311 Bacterial export proteins, family 1 15 245 4.7E-63 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A02271 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 2.3E-21 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A02271 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 2.3E-21 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A02271 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 2.3E-21 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A02271 316d0fde928bca87621d8714edcc68cc 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 2.3E-21 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01162 348b40c679197faba6c2b700f1c61dbc 344 Gene3D G3DSA:3.30.530.50 96 206 1.2E-11 T 12-10-2018 vfu_A01162 348b40c679197faba6c2b700f1c61dbc 344 Pfam PF06804 NlpB/DapX lipoprotein 36 335 1.5E-104 T 12-10-2018 IPR010653 NlpB/DapX lipoprotein vfu_A01162 348b40c679197faba6c2b700f1c61dbc 344 Gene3D G3DSA:3.30.310.170 220 343 6.5E-42 T 12-10-2018 vfu_A01162 348b40c679197faba6c2b700f1c61dbc 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 35.001 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC vfu_A01162 348b40c679197faba6c2b700f1c61dbc 344 PIRSF PIRSF026343 4 339 1.4E-130 T 12-10-2018 IPR014524 Outer membrane protein assembly factor BamC vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 SUPERFAMILY SSF52518 4 326 1.38E-120 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 SMART SM00861 353 524 1.1E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 Gene3D G3DSA:3.40.50.970 1 324 1.8E-131 T 12-10-2018 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 9.6E-20 T 12-10-2018 IPR033248 Transketolase, C-terminal domain vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 332 2.8E-167 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 Gene3D G3DSA:3.40.50.970 325 536 1.6E-84 T 12-10-2018 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 1.1E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 662 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 SUPERFAMILY SSF52922 532 663 1.57E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 Gene3D G3DSA:3.40.50.920 537 663 4.2E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_B00095 ccce91ce348a218724ec28887e0dd2a0 663 SUPERFAMILY SSF52518 334 525 5.6E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00850 8d59a08713ec8c759b6a028d33b0076b 236 PIRSF PIRSF006158 27 236 3.0E-68 T 12-10-2018 IPR016476 SH3 domain protein vfu_A00850 8d59a08713ec8c759b6a028d33b0076b 236 Gene3D G3DSA:2.30.30.40 64 116 3.3E-9 T 12-10-2018 vfu_A00850 8d59a08713ec8c759b6a028d33b0076b 236 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 57 235 6.9E-50 T 12-10-2018 IPR016476 SH3 domain protein vfu_A00850 8d59a08713ec8c759b6a028d33b0076b 236 Pfam PF08239 Bacterial SH3 domain 65 115 1.6E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type vfu_A00850 8d59a08713ec8c759b6a028d33b0076b 236 SMART SM00287 53 119 1.5E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type vfu_A02438 439bd3b6c8777a3169a5dfd108c4cf32 415 Gene3D G3DSA:3.40.190.10 139 395 4.0E-158 T 12-10-2018 vfu_A02438 439bd3b6c8777a3169a5dfd108c4cf32 415 SUPERFAMILY SSF53850 21 413 2.75E-55 T 12-10-2018 vfu_A02438 439bd3b6c8777a3169a5dfd108c4cf32 415 Gene3D G3DSA:3.40.190.10 24 371 4.0E-158 T 12-10-2018 vfu_A02438 439bd3b6c8777a3169a5dfd108c4cf32 415 Pfam PF01547 Bacterial extracellular solute-binding protein 58 284 2.2E-17 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A02593 7c80f73b21cff978ad1b5bfe03f885e7 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 9.0E-65 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 vfu_A02593 7c80f73b21cff978ad1b5bfe03f885e7 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 3.5E-76 T 12-10-2018 IPR020206 Uncharacterised protein family, VP2110 vfu_A02370 ea936cd64a63eadba7b783ba4a7401fb 513 Pfam PF11840 Protein of unknown function (DUF3360) 9 513 3.7E-266 T 12-10-2018 IPR021794 Protein of unknown function DUF3360 vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 5.7E-152 T 12-10-2018 IPR022462 Lysine-2,3-aminomutase-like vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 SUPERFAMILY SSF102114 102 324 2.88E-24 T 12-10-2018 vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 PIRSF PIRSF004911 3 340 3.2E-112 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 Pfam PF04055 Radical SAM superfamily 117 235 1.0E-9 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 6.1E-123 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 Pfam PF13353 4Fe-4S single cluster domain 115 182 6.8E-7 T 12-10-2018 vfu_A00606 b576bbac51c6f5b26dca99c6465a0e52 340 Gene3D G3DSA:3.20.20.70 51 334 3.3E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 SUPERFAMILY SSF141729 22 139 3.01E-14 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 Gene3D G3DSA:2.60.40.3110 253 341 4.8E-28 T 12-10-2018 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 Pfam PF00577 Outer membrane usher protein 180 728 1.1E-142 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 Pfam PF13954 PapC N-terminal domain 23 164 4.3E-25 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 Gene3D G3DSA:2.60.40.2070 737 808 7.8E-12 T 12-10-2018 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 Gene3D G3DSA:2.60.40.2610 641 733 2.9E-12 T 12-10-2018 vfu_B01141 b4d245c94cbe10ea39b1aef24b4287f2 815 Gene3D G3DSA:3.10.20.410 21 140 6.9E-12 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 58 1.6E-7 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 SUPERFAMILY SSF51905 1 456 8.26E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 SUPERFAMILY SSF54373 213 311 7.06E-30 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 Gene3D G3DSA:3.30.70.20 459 552 8.8E-34 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 SUPERFAMILY SSF54862 458 557 6.98E-25 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.6E-5 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 181 196 1.6E-5 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 Gene3D G3DSA:3.30.9.90 80 458 1.3E-177 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 454 555 3.7E-47 T 12-10-2018 vfu_B01458 643f3a0051fcb3f1e1580e6ff08a026a 557 Gene3D G3DSA:3.50.50.60 7 390 1.3E-177 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01030 2b05f84db3ad852ada619a546c3f8255 255 Pfam PF04205 FMN-binding domain 142 237 4.3E-16 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 vfu_A01030 2b05f84db3ad852ada619a546c3f8255 255 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 248 1.6E-93 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 vfu_A01030 2b05f84db3ad852ada619a546c3f8255 255 SMART SM00900 142 240 4.9E-32 T 12-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 vfu_A01030 2b05f84db3ad852ada619a546c3f8255 255 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 252 35.659 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 vfu_A01030 2b05f84db3ad852ada619a546c3f8255 255 PIRSF PIRSF009437 1 255 6.1E-103 T 12-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 SUPERFAMILY SSF49354 34 161 2.83E-38 T 12-10-2018 IPR008962 PapD-like superfamily vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 Gene3D G3DSA:2.60.40.10 164 256 1.1E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 116 133 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 SUPERFAMILY SSF49584 165 253 1.57E-11 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 PRINTS PR00969 Pili chaperone signature 117 134 3.0E-26 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 PRINTS PR00969 Pili chaperone signature 40 49 3.0E-26 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 PRINTS PR00969 Pili chaperone signature 181 196 3.0E-26 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 PRINTS PR00969 Pili chaperone signature 89 110 3.0E-26 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 PRINTS PR00969 Pili chaperone signature 143 158 3.0E-26 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 40 161 6.2E-40 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 187 249 3.3E-13 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal vfu_B01315 fd52dd73bd9ba0db54c7a7d741a8c64c 257 Gene3D G3DSA:2.60.40.10 41 162 3.4E-39 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A02992 2157199664baf41673fc93b18b241ab5 117 SMART SM00905 4 114 2.3E-49 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 vfu_A02992 2157199664baf41673fc93b18b241ab5 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 8.4E-33 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 vfu_A02992 2157199664baf41673fc93b18b241ab5 117 Gene3D G3DSA:3.30.1130.10 1 116 2.2E-46 T 12-10-2018 vfu_A02992 2157199664baf41673fc93b18b241ab5 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 8.1E-38 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 vfu_A02992 2157199664baf41673fc93b18b241ab5 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 2.1E-29 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 vfu_A02992 2157199664baf41673fc93b18b241ab5 117 SUPERFAMILY SSF55620 1 115 4.73E-37 T 12-10-2018 vfu_A00609 bb7f88e9400c055dd39d5af367189c66 127 PIRSF PIRSF000180 1 127 2.2E-53 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 vfu_A00609 bb7f88e9400c055dd39d5af367189c66 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.593 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 vfu_A00609 bb7f88e9400c055dd39d5af367189c66 127 SUPERFAMILY SSF81343 1 127 6.32E-51 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00609 bb7f88e9400c055dd39d5af367189c66 127 Gene3D G3DSA:1.20.1300.10 1 127 1.9E-47 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00609 bb7f88e9400c055dd39d5af367189c66 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-50 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 vfu_A00609 bb7f88e9400c055dd39d5af367189c66 127 Pfam PF02300 Fumarate reductase subunit C 2 127 1.6E-48 T 12-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 vfu_A02307 7fdd91b3b9ae78097db5eb81f7619e8e 284 Gene3D G3DSA:3.40.50.10490 94 277 8.7E-40 T 12-10-2018 vfu_A02307 7fdd91b3b9ae78097db5eb81f7619e8e 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02307 7fdd91b3b9ae78097db5eb81f7619e8e 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 vfu_A02307 7fdd91b3b9ae78097db5eb81f7619e8e 284 SUPERFAMILY SSF53697 93 279 3.71E-40 T 12-10-2018 vfu_A02307 7fdd91b3b9ae78097db5eb81f7619e8e 284 Pfam PF01380 SIS domain 124 252 1.6E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A02307 7fdd91b3b9ae78097db5eb81f7619e8e 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01607 d2d05dbbb8b349ffde35f9715a76787e 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.1E-28 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 vfu_A01607 d2d05dbbb8b349ffde35f9715a76787e 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.423 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 vfu_A01607 d2d05dbbb8b349ffde35f9715a76787e 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.3E-39 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 vfu_A01607 d2d05dbbb8b349ffde35f9715a76787e 72 SUPERFAMILY SSF50249 1 70 3.74E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01607 d2d05dbbb8b349ffde35f9715a76787e 72 Gene3D G3DSA:2.40.50.140 1 72 5.4E-37 T 12-10-2018 vfu_A01607 d2d05dbbb8b349ffde35f9715a76787e 72 SMART SM00316 4 72 2.0E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 Pfam PF01381 Helix-turn-helix 32 84 3.2E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 Pfam PF07883 Cupin domain 146 204 2.5E-10 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 Gene3D G3DSA:1.10.260.40 26 92 6.7E-16 T 12-10-2018 vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 SUPERFAMILY SSF51182 97 204 9.16E-27 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 Gene3D G3DSA:2.60.120.10 93 205 5.4E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 SUPERFAMILY SSF47413 26 90 2.44E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B01365 79007f4cdbfed3e24a34d2acc4fc4a8a 207 SMART SM00530 31 86 1.3E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 228 237 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Pfam PF00158 Sigma-54 interaction domain 18 184 4.5E-63 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Gene3D G3DSA:3.40.50.300 6 188 9.9E-59 T 12-10-2018 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 292 312 7.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 275 292 7.9E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Gene3D G3DSA:1.10.8.60 189 265 7.4E-21 T 12-10-2018 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Pfam PF02954 Bacterial regulatory protein, Fis family 272 309 1.3E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 Gene3D G3DSA:1.10.10.60 267 312 9.9E-13 T 12-10-2018 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 SUPERFAMILY SSF46689 228 311 3.78E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 SMART SM00382 38 182 4.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01589 d655dfd772b0d5ea2191bd1dbe08fcf8 313 SUPERFAMILY SSF52540 17 256 3.0E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 SMART SM00448 4 112 0.0049 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 SMART SM00382 145 292 1.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:3.40.50.2300 1 117 2.1E-10 T 12-10-2018 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 SUPERFAMILY SSF52172 1 169 2.99E-19 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 Pfam PF00158 Sigma-54 interaction domain 126 291 2.0E-70 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 Pfam PF02954 Bacterial regulatory protein, Fis family 390 426 3.7E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 SUPERFAMILY SSF46689 335 426 4.93E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 SUPERFAMILY SSF52540 129 364 1.27E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:1.10.10.60 369 435 9.8E-11 T 12-10-2018 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:1.10.8.60 296 368 5.2E-22 T 12-10-2018 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 149 162 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 394 411 5.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 431 5.8E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 Gene3D G3DSA:3.40.50.300 118 295 1.5E-65 T 12-10-2018 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 211 226 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A01403 5556c38dd9e6514878d78ce769bb606f 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 335 344 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 SMART SM00421 209 266 9.6E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 SUPERFAMILY SSF46894 199 269 2.11E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 226 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 242 254 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 226 242 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 Gene3D G3DSA:1.10.10.10 142 278 9.3E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01136 584f8ec02c07f04509df0d1bb5ae0470 280 Pfam PF00196 Bacterial regulatory proteins, luxR family 211 265 9.2E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:3.50.30.10 173 399 4.9E-60 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 173 294 4.4E-25 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF55781 2 158 1.11E-31 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 1.6E-22 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 1.6E-22 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 1.6E-22 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 1.6E-22 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF51621 419 714 4.71E-95 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF47831 197 311 2.48E-27 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 723 7.1E-137 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 SUPERFAMILY SSF52009 293 413 6.67E-26 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:1.10.274.10 190 314 4.9E-60 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 SMART SM00065 17 163 7.7E-20 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:3.20.20.60 400 740 1.4E-100 T 12-10-2018 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 3.0E-16 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF01590 GAF domain 20 152 3.5E-13 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 423 706 3.3E-92 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 vfu_A00970 77fc64ff35a11831481b9d8e0c492748 748 Gene3D G3DSA:3.30.450.40 1 161 6.7E-41 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00894 7e4da8c31a234bd6601f871e3478fa99 209 Pfam PF13247 4Fe-4S dicluster domain 61 156 8.9E-31 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00894 7e4da8c31a234bd6601f871e3478fa99 209 Pfam PF12800 4Fe-4S binding domain 14 28 0.048 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00894 7e4da8c31a234bd6601f871e3478fa99 209 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 6 166 6.7E-84 T 12-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B vfu_B00894 7e4da8c31a234bd6601f871e3478fa99 209 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B00894 7e4da8c31a234bd6601f871e3478fa99 209 Gene3D G3DSA:3.30.70.20 1 199 1.6E-54 T 12-10-2018 vfu_B00894 7e4da8c31a234bd6601f871e3478fa99 209 SUPERFAMILY SSF54862 1 201 2.3E-69 T 12-10-2018 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.215 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:3.40.50.620 2 317 1.1E-133 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 SUPERFAMILY SSF52374 3 301 1.58E-108 T 12-10-2018 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 SUPERFAMILY SSF48163 302 464 7.59E-47 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 Gene3D G3DSA:1.10.10.350 369 473 6.3E-24 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 2.6E-115 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 466 3.9E-193 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.8E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.8E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.8E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.8E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A01109 e26f336bc51d1c3db90d84bab1b43501 475 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.8E-28 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A01346 fd0a6343feb2ed28b6493a8f492d3455 623 SUPERFAMILY SSF69593 384 571 1.83E-29 T 12-10-2018 vfu_A01346 fd0a6343feb2ed28b6493a8f492d3455 623 SMART SM00563 455 569 2.1E-35 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A01346 fd0a6343feb2ed28b6493a8f492d3455 623 SUPERFAMILY SSF103473 10 423 5.75E-28 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01346 fd0a6343feb2ed28b6493a8f492d3455 623 Pfam PF01553 Acyltransferase 440 567 9.0E-24 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A01346 fd0a6343feb2ed28b6493a8f492d3455 623 Pfam PF07690 Major Facilitator Superfamily 18 315 8.1E-11 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01346 fd0a6343feb2ed28b6493a8f492d3455 623 Gene3D G3DSA:1.20.1250.20 8 421 1.3E-27 T 12-10-2018 vfu_B01037 52315fc319621fd9967bbe9f2b290949 250 SMART SM00014 84 233 8.6E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase vfu_B01037 52315fc319621fd9967bbe9f2b290949 250 Gene3D G3DSA:1.20.144.10 12 250 2.9E-48 T 12-10-2018 vfu_B01037 52315fc319621fd9967bbe9f2b290949 250 Pfam PF01569 PAP2 superfamily 87 233 3.0E-21 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase vfu_B01037 52315fc319621fd9967bbe9f2b290949 250 SUPERFAMILY SSF48317 21 238 9.81E-26 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 526 730 3.3E-41 T 12-10-2018 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 737 940 1.83E-37 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 739 935 5.1E-34 T 12-10-2018 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 519 722 4.67E-42 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 274 474 6.3E-34 T 12-10-2018 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 49 258 1.1E-55 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Pfam PF05193 Peptidase M16 inactive domain 219 392 2.9E-29 T 12-10-2018 IPR007863 Peptidase M16, C-terminal vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Pfam PF05193 Peptidase M16 inactive domain 686 857 6.7E-24 T 12-10-2018 IPR007863 Peptidase M16, C-terminal vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Pfam PF00675 Insulinase (Peptidase family M16) 538 643 3.6E-9 T 12-10-2018 IPR011765 Peptidase M16, N-terminal vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Pfam PF00675 Insulinase (Peptidase family M16) 62 179 4.6E-18 T 12-10-2018 IPR011765 Peptidase M16, N-terminal vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 Gene3D G3DSA:3.30.830.10 47 270 2.9E-67 T 12-10-2018 vfu_A02968 eaa239c28ae32187caa67540912b58ee 951 SUPERFAMILY SSF63411 281 467 1.23E-29 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 SUPERFAMILY SSF58104 163 472 1.7E-68 T 12-10-2018 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 232 261 2.5E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 309 336 2.5E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 338 367 2.5E-24 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 SMART SM00283 211 472 5.5E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 Gene3D G3DSA:1.10.287.950 148 474 1.0E-65 T 12-10-2018 vfu_B01393 831c1f7092311cab4d701affcf2932d3 474 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 263 437 2.3E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01551 009b6c0f5916c12a19b65cb789c506f6 198 SUPERFAMILY SSF89392 20 197 3.06E-50 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX vfu_A01551 009b6c0f5916c12a19b65cb789c506f6 198 Gene3D G3DSA:2.50.20.10 16 197 3.5E-47 T 12-10-2018 vfu_A01551 009b6c0f5916c12a19b65cb789c506f6 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 10 197 1.9E-58 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 vfu_A01551 009b6c0f5916c12a19b65cb789c506f6 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 29 186 3.1E-54 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like vfu_A01551 009b6c0f5916c12a19b65cb789c506f6 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 30.775 T 12-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 vfu_A01675 3e3ad0dcaef47f07b156f84beabcd8c6 208 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 2.9E-10 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 vfu_A01675 3e3ad0dcaef47f07b156f84beabcd8c6 208 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 vfu_A01675 3e3ad0dcaef47f07b156f84beabcd8c6 208 Gene3D G3DSA:1.20.120.1760 2 199 4.5E-19 T 12-10-2018 vfu_B01287 3a8090554a53eb4f8a3534ea835ba48a 255 Gene3D G3DSA:3.30.1150.10 154 254 7.1E-20 T 12-10-2018 vfu_B01287 3a8090554a53eb4f8a3534ea835ba48a 255 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 177 253 9.4E-22 T 12-10-2018 IPR006260 TonB/TolA, C-terminal vfu_B01287 3a8090554a53eb4f8a3534ea835ba48a 255 SUPERFAMILY SSF74653 175 251 1.96E-21 T 12-10-2018 vfu_B01287 3a8090554a53eb4f8a3534ea835ba48a 255 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 176 253 4.7E-21 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 vfu_B00031 37bae5ba4239ed5acdd42b71146b761f 358 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 2 345 8.1E-67 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 SUPERFAMILY SSF143975 3 420 3.66E-136 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 Gene3D G3DSA:3.50.30.80 421 573 8.1E-55 T 12-10-2018 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 6.5E-267 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.242 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 Pfam PF00920 Dehydratase family 34 604 5.9E-220 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 SUPERFAMILY SSF52016 421 608 1.33E-60 T 12-10-2018 vfu_A00291 9c8dbaef5cc2ba0a3fabaf0d06dfa140 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 7.8E-87 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 Pfam PF01578 Cytochrome C assembly protein 27 184 4.2E-32 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.6E-66 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.6E-66 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.6E-66 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.6E-66 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.6E-66 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01264 47bc6e5b1ff0803d85b3709802d24385 248 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.6E-66 T 12-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01470 e2826808a619232941388b0c20c480fc 261 SUPERFAMILY SSF51735 7 259 3.55E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01470 e2826808a619232941388b0c20c480fc 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 179 0.0075 T 12-10-2018 vfu_A01470 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 4.5E-57 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 14 31 4.5E-57 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 4.5E-57 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 4.5E-57 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 4.5E-57 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 4.5E-57 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 10 260 1.6E-113 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 vfu_A01470 e2826808a619232941388b0c20c480fc 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_A01470 e2826808a619232941388b0c20c480fc 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 3.2E-53 T 12-10-2018 vfu_A01470 e2826808a619232941388b0c20c480fc 261 Gene3D G3DSA:3.40.50.720 1 260 2.3E-71 T 12-10-2018 vfu_A02011 a5b08b475ff4d4b38ac39132313b4001 109 Gene3D G3DSA:3.30.1420.10 2 37 1.2E-10 T 12-10-2018 vfu_A02011 a5b08b475ff4d4b38ac39132313b4001 109 Pfam PF04358 DsrC like protein 3 109 1.3E-42 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE vfu_A02011 a5b08b475ff4d4b38ac39132313b4001 109 SUPERFAMILY SSF69721 2 109 1.96E-39 T 12-10-2018 IPR025526 DsrC-like domain superfamily vfu_A02011 a5b08b475ff4d4b38ac39132313b4001 109 PIRSF PIRSF006223 2 109 7.1E-41 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE vfu_A02011 a5b08b475ff4d4b38ac39132313b4001 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 1.6E-47 T 12-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE vfu_A02011 a5b08b475ff4d4b38ac39132313b4001 109 Gene3D G3DSA:1.10.10.370 39 109 8.5E-31 T 12-10-2018 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 207 1.7E-39 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF51735 315 496 3.74E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:1.10.1040.50 498 710 4.9E-72 T 12-10-2018 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF48179 496 602 3.32E-28 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:3.40.50.720 314 497 8.9E-65 T 12-10-2018 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.4E-58 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Gene3D G3DSA:3.90.226.10 1 312 4.9E-91 T 12-10-2018 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 52.384 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF48179 626 715 2.13E-24 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 8.1E-25 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 699 7.4E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 12-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 vfu_A00358 97be344b142be0d98cec53158f68c35c 723 SUPERFAMILY SSF52096 2 305 1.08E-66 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01383 3e9345adfee6008b0dd87948981dcca2 225 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01383 3e9345adfee6008b0dd87948981dcca2 225 Gene3D G3DSA:3.40.50.300 3 225 2.2E-67 T 12-10-2018 vfu_B01383 3e9345adfee6008b0dd87948981dcca2 225 SMART SM00382 34 224 4.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01383 3e9345adfee6008b0dd87948981dcca2 225 SUPERFAMILY SSF52540 5 223 8.67E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01383 3e9345adfee6008b0dd87948981dcca2 225 Pfam PF00005 ABC transporter 25 171 8.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02458 b3b0a3722c438f716a02484fcf084f50 439 Pfam PF07690 Major Facilitator Superfamily 31 391 4.0E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02458 b3b0a3722c438f716a02484fcf084f50 439 Gene3D G3DSA:1.20.1250.20 234 433 1.5E-44 T 12-10-2018 vfu_A02458 b3b0a3722c438f716a02484fcf084f50 439 Gene3D G3DSA:1.20.1250.20 15 218 7.7E-47 T 12-10-2018 vfu_A02458 b3b0a3722c438f716a02484fcf084f50 439 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 31 408 7.8E-126 T 12-10-2018 vfu_A02458 b3b0a3722c438f716a02484fcf084f50 439 SUPERFAMILY SSF103473 16 431 6.41E-79 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02458 b3b0a3722c438f716a02484fcf084f50 439 PIRSF PIRSF002808 4 437 5.6E-127 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 Pfam PF01494 FAD binding domain 5 309 2.2E-26 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 SUPERFAMILY SSF51905 4 377 1.15E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 Gene3D G3DSA:3.50.50.60 6 331 6.1E-100 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 Gene3D G3DSA:3.30.9.50 81 267 6.1E-100 T 12-10-2018 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 2.7E-19 T 12-10-2018 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 2.7E-19 T 12-10-2018 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.7E-19 T 12-10-2018 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.7E-19 T 12-10-2018 vfu_A02639 f0ea888d66e8cbb3c30577b7ca083e88 384 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 383 6.0E-114 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 vfu_B00187 14409ff25baa732e0a326b1e0c0e8bd5 293 SUPERFAMILY SSF51735 117 204 2.11E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00187 14409ff25baa732e0a326b1e0c0e8bd5 293 Pfam PF02625 XdhC and CoxI family 25 84 3.5E-14 T 12-10-2018 IPR003777 XdhC- CoxI vfu_B00187 14409ff25baa732e0a326b1e0c0e8bd5 293 Pfam PF13478 XdhC Rossmann domain 118 260 7.0E-31 T 12-10-2018 IPR027051 XdhC Rossmann domain vfu_B00187 14409ff25baa732e0a326b1e0c0e8bd5 293 Gene3D G3DSA:3.40.50.720 117 263 4.4E-30 T 12-10-2018 vfu_B00187 14409ff25baa732e0a326b1e0c0e8bd5 293 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 33 261 1.5E-77 T 12-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC vfu_A00933 dd0929574c85f628dcb12f134875940d 418 SUPERFAMILY SSF52540 136 380 7.91E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00933 dd0929574c85f628dcb12f134875940d 418 ProSitePatterns PS00674 AAA-protein family signature. 283 301 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 vfu_A00933 dd0929574c85f628dcb12f134875940d 418 Gene3D G3DSA:2.40.50.920 15 91 1.1E-31 T 12-10-2018 vfu_A00933 dd0929574c85f628dcb12f134875940d 418 SMART SM00382 176 315 5.1E-26 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00933 dd0929574c85f628dcb12f134875940d 418 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 180 312 2.3E-46 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A00933 dd0929574c85f628dcb12f134875940d 418 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 93 388 6.0E-161 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 vfu_A00933 dd0929574c85f628dcb12f134875940d 418 Gene3D G3DSA:3.40.50.300 133 312 3.8E-70 T 12-10-2018 vfu_A00933 dd0929574c85f628dcb12f134875940d 418 Gene3D G3DSA:1.10.8.60 314 389 5.4E-25 T 12-10-2018 vfu_A00933 dd0929574c85f628dcb12f134875940d 418 Pfam PF06480 FtsH Extracellular 1 85 1.9E-10 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 vfu_B00011 3261a6538484885d691ee67ea25905b8 245 Gene3D G3DSA:3.40.50.720 1 245 1.2E-68 T 12-10-2018 vfu_B00011 3261a6538484885d691ee67ea25905b8 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B00011 3261a6538484885d691ee67ea25905b8 245 SUPERFAMILY SSF51735 2 244 1.42E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 5.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.2E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 243 2.6E-56 T 12-10-2018 vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 5.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 5.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00011 3261a6538484885d691ee67ea25905b8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 5.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 SUPERFAMILY SSF53155 4 78 4.9E-19 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 Gene3D G3DSA:3.30.160.70 1 70 9.0E-18 T 12-10-2018 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 7.7E-33 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 2.0E-37 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 SUPERFAMILY SSF46767 74 154 1.23E-32 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 Gene3D G3DSA:1.10.10.10 74 157 4.4E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 46.053 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 vfu_B00862 3ce4c9ef76589dc966c9b17c69a97981 157 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 71 2.6E-4 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 vfu_A02975 84478de520e13c85d4054d4cf84fd9d1 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 4.4E-30 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 vfu_A02975 84478de520e13c85d4054d4cf84fd9d1 65 Gene3D G3DSA:3.30.70.1680 1 59 8.5E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 vfu_A02975 84478de520e13c85d4054d4cf84fd9d1 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 vfu_A02975 84478de520e13c85d4054d4cf84fd9d1 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 63 17.074 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 vfu_A02975 84478de520e13c85d4054d4cf84fd9d1 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 vfu_A02975 84478de520e13c85d4054d4cf84fd9d1 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 vfu_B00775 0c036778eb95b81196e29daac5574303 228 Gene3D G3DSA:3.40.50.2300 3 135 1.1E-33 T 12-10-2018 vfu_B00775 0c036778eb95b81196e29daac5574303 228 SUPERFAMILY SSF52172 2 125 1.21E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00775 0c036778eb95b81196e29daac5574303 228 Pfam PF00072 Response regulator receiver domain 4 113 9.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00775 0c036778eb95b81196e29daac5574303 228 Gene3D G3DSA:1.10.10.10 136 228 2.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00775 0c036778eb95b81196e29daac5574303 228 SUPERFAMILY SSF46894 130 227 2.89E-25 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00775 0c036778eb95b81196e29daac5574303 228 SMART SM00448 2 113 1.9E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00775 0c036778eb95b81196e29daac5574303 228 SMART SM00862 154 227 5.5E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00775 0c036778eb95b81196e29daac5574303 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 9.2E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 1.2E-12 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 SUPERFAMILY SSF52833 1 77 8.33E-18 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 SUPERFAMILY SSF47616 81 216 8.88E-39 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 211 2.2E-61 T 12-10-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 Gene3D G3DSA:1.20.1050.10 91 216 9.5E-39 T 12-10-2018 vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 Pfam PF04399 Glutaredoxin 2, C terminal domain 87 215 3.0E-44 T 12-10-2018 IPR007494 Glutaredoxin 2, C-terminal vfu_A01996 44bca2bbc3ffe21db40fead75b4fd60b 216 Gene3D G3DSA:3.40.30.10 8 84 1.5E-27 T 12-10-2018 vfu_A00424 dc2dc4aff618b6c6df0a9f480e9b001d 224 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 2.3E-71 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 vfu_A00424 dc2dc4aff618b6c6df0a9f480e9b001d 224 Pfam PF01926 50S ribosome-binding GTPase 29 147 2.3E-19 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00424 dc2dc4aff618b6c6df0a9f480e9b001d 224 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.839 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 vfu_A00424 dc2dc4aff618b6c6df0a9f480e9b001d 224 SUPERFAMILY SSF52540 16 199 2.17E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00424 dc2dc4aff618b6c6df0a9f480e9b001d 224 Gene3D G3DSA:3.40.50.300 3 204 1.8E-56 T 12-10-2018 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 9.1E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 9.1E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 Pfam PF00034 Cytochrome c 25 104 8.5E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 Pfam PF00034 Cytochrome c 116 201 2.0E-9 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 Gene3D G3DSA:1.10.760.10 110 205 2.0E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 PIRSF PIRSF000005 1 205 1.2E-63 T 12-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 SUPERFAMILY SSF46626 6 105 1.72E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 SUPERFAMILY SSF46626 114 203 1.65E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00425 354ca75ba14a83dbf08f17de3304dc3e 205 Gene3D G3DSA:1.10.760.10 19 107 3.1E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B00621 929545f545afc684d65c85736035f05f 636 SUPERFAMILY SSF51419 66 348 1.96E-64 T 12-10-2018 IPR029066 PLP-binding barrel vfu_B00621 929545f545afc684d65c85736035f05f 636 Gene3D G3DSA:3.20.20.10 67 351 1.5E-237 T 12-10-2018 IPR029066 PLP-binding barrel vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 3.7E-63 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 Gene3D G3DSA:1.20.58.930 368 463 1.5E-237 T 12-10-2018 vfu_B00621 929545f545afc684d65c85736035f05f 636 PIRSF PIRSF001336 1 636 3.8E-250 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 Gene3D G3DSA:2.40.37.10 14 572 1.5E-237 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 7.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 7.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 7.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_B00621 929545f545afc684d65c85736035f05f 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 7.8E-13 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_B00621 929545f545afc684d65c85736035f05f 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 635 42.415 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00621 929545f545afc684d65c85736035f05f 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 77 346 4.8E-53 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 vfu_B00621 929545f545afc684d65c85736035f05f 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 634 4.2E-271 T 12-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 vfu_B00551 2cdec8d597a82d82609297c620a98963 579 Pfam PF00664 ABC transporter transmembrane region 21 290 1.3E-42 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_B00551 2cdec8d597a82d82609297c620a98963 579 SUPERFAMILY SSF90123 7 321 2.22E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00551 2cdec8d597a82d82609297c620a98963 579 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00551 2cdec8d597a82d82609297c620a98963 579 SUPERFAMILY SSF52540 327 568 2.5E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00551 2cdec8d597a82d82609297c620a98963 579 SMART SM00382 359 544 5.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00551 2cdec8d597a82d82609297c620a98963 579 Pfam PF00005 ABC transporter 350 498 4.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00551 2cdec8d597a82d82609297c620a98963 579 Gene3D G3DSA:3.40.50.300 326 578 2.2E-80 T 12-10-2018 vfu_B00551 2cdec8d597a82d82609297c620a98963 579 Gene3D G3DSA:1.20.1560.10 1 322 6.9E-78 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00742 943b06e161c72c454b7bb84832ae0b6f 327 Gene3D G3DSA:3.20.20.70 9 290 4.7E-17 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00742 943b06e161c72c454b7bb84832ae0b6f 327 SUPERFAMILY SSF102114 12 285 2.35E-18 T 12-10-2018 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 SUPERFAMILY SSF48173 191 468 3.27E-108 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 Pfam PF00875 DNA photolyase 3 164 3.9E-48 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 PRINTS PR00147 DNA photolyase signature 382 396 7.5E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 PRINTS PR00147 DNA photolyase signature 343 361 7.5E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 PRINTS PR00147 DNA photolyase signature 142 158 7.5E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 PRINTS PR00147 DNA photolyase signature 323 339 7.5E-30 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 Gene3D G3DSA:1.10.579.10 291 471 3.5E-80 T 12-10-2018 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 Pfam PF03441 FAD binding domain of DNA photolyase 273 465 2.3E-82 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 Gene3D G3DSA:1.25.40.80 131 287 6.5E-79 T 12-10-2018 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 Gene3D G3DSA:3.40.50.620 3 204 6.5E-79 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 SUPERFAMILY SSF52425 2 189 8.37E-52 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal vfu_B01065 08a2b916916a7dda3416e1ea36d6872c 475 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal vfu_B00018 65e4ac5a6c923efdbf58b1496f454f5b 672 Pfam PF11412 Disulphide bond corrector protein DsbC 31 140 2.3E-19 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain vfu_B00018 65e4ac5a6c923efdbf58b1496f454f5b 672 Pfam PF13899 Thioredoxin-like 576 647 6.8E-10 T 12-10-2018 vfu_B00018 65e4ac5a6c923efdbf58b1496f454f5b 672 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 290 460 2.4E-10 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 vfu_B00018 65e4ac5a6c923efdbf58b1496f454f5b 672 Gene3D G3DSA:3.40.30.10 559 671 2.3E-9 T 12-10-2018 vfu_B00018 65e4ac5a6c923efdbf58b1496f454f5b 672 SUPERFAMILY SSF52833 568 651 3.93E-10 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02018 4d0a637f7d841f18cfed3b75df9c5746 179 Pfam PF02975 Methylamine dehydrogenase, L chain 66 175 1.1E-48 T 12-10-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 vfu_A02018 4d0a637f7d841f18cfed3b75df9c5746 179 PIRSF PIRSF000192 7 178 1.1E-48 T 12-10-2018 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 vfu_A02018 4d0a637f7d841f18cfed3b75df9c5746 179 Gene3D G3DSA:2.60.30.10 52 179 3.7E-55 T 12-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 vfu_A02018 4d0a637f7d841f18cfed3b75df9c5746 179 SUPERFAMILY SSF57561 62 177 1.96E-48 T 12-10-2018 IPR036560 Methylamine/Aralkylamine dehydrogenase light chain superfamily GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 vfu_A01422 529f895a0efe3068ce9e74de4d681b05 697 Gene3D G3DSA:2.40.170.20 167 697 4.6E-139 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A01422 529f895a0efe3068ce9e74de4d681b05 697 Pfam PF00593 TonB dependent receptor 246 696 9.0E-40 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A01422 529f895a0efe3068ce9e74de4d681b05 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 55 697 1.2E-95 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_A01422 529f895a0efe3068ce9e74de4d681b05 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 151 1.6E-11 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_A01422 529f895a0efe3068ce9e74de4d681b05 697 Gene3D G3DSA:2.170.130.10 34 163 3.0E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_A01422 529f895a0efe3068ce9e74de4d681b05 697 SUPERFAMILY SSF56935 24 697 2.38E-108 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:1.20.1640.10 24 522 3.0E-254 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82866 306 505 5.1E-34 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.2090.10 193 285 3.0E-254 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82693 54 149 8.72E-22 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82693 150 337 1.52E-18 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82714 198 281 5.23E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.70.1440 669 870 3.0E-254 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82714 726 801 7.32E-8 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.70.1430 570 668 3.0E-254 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:1.20.1640.10 523 1022 3.0E-254 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.70.1430 54 818 3.0E-254 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.70.1320 150 342 3.0E-254 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Gene3D G3DSA:3.30.2090.10 720 810 3.0E-254 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 SUPERFAMILY SSF82866 807 1029 2.35E-46 T 12-10-2018 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 Pfam PF00873 AcrB/AcrD/AcrF family 18 1026 2.0E-166 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 4.1E-26 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 4.1E-26 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 4.1E-26 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 4.1E-26 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 4.1E-26 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01666 95e3e5484dbf8b8321a74cac4a5e22c9 1032 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 4.1E-26 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 SUPERFAMILY SSF56784 5 190 1.84E-45 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 186 1.4E-13 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 Gene3D G3DSA:1.10.150.240 19 89 9.5E-44 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 186 1.3E-27 T 12-10-2018 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 3.8E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 3.8E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.8E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 175 188 3.8E-7 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 Gene3D G3DSA:3.40.50.1000 7 188 9.5E-44 T 12-10-2018 IPR023214 HAD superfamily vfu_B00302 960eddb7aaee2976ef0b4d92ed2f351c 197 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 6 186 4.5E-56 T 12-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase vfu_A00904 a4f19c3228113e0d9ec6992eec66beee 529 Gene3D G3DSA:1.10.3720.10 273 528 4.3E-33 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00904 a4f19c3228113e0d9ec6992eec66beee 529 SUPERFAMILY SSF161098 270 523 3.6E-39 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00904 a4f19c3228113e0d9ec6992eec66beee 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 521 4.0E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00904 a4f19c3228113e0d9ec6992eec66beee 529 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 242 2.9E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00904 a4f19c3228113e0d9ec6992eec66beee 529 SUPERFAMILY SSF161098 2 246 1.19E-42 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00904 a4f19c3228113e0d9ec6992eec66beee 529 Gene3D G3DSA:1.10.3720.10 1 256 8.6E-53 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 SUPERFAMILY SSF50129 1 96 1.53E-26 T 12-10-2018 IPR011032 GroES-like superfamily vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 PRINTS PR00297 10kDa chaperonin signature 60 72 2.3E-23 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 PRINTS PR00297 10kDa chaperonin signature 25 46 2.3E-23 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 PRINTS PR00297 10kDa chaperonin signature 82 95 2.3E-23 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 PRINTS PR00297 10kDa chaperonin signature 3 18 2.3E-23 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 Gene3D G3DSA:2.30.33.40 1 96 1.5E-31 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 1.6E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 21.384 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_B00630 f329f0195e86ec613f0089f95b9044a8 96 SMART SM00883 2 95 7.3E-40 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 350 7.4E-106 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 Pfam PF02222 ATP-grasp domain 101 274 1.2E-50 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 Gene3D G3DSA:3.30.470.20 92 343 2.2E-93 T 12-10-2018 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 37.241 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 SUPERFAMILY SSF51246 299 371 2.67E-19 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 Gene3D G3DSA:3.40.50.20 1 80 1.2E-17 T 12-10-2018 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 SUPERFAMILY SSF52440 1 88 6.19E-16 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 Gene3D G3DSA:3.30.1490.20 107 177 2.2E-93 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A00267 a70b1cca64317867ff79f4707d287af9 377 SUPERFAMILY SSF56059 92 295 3.54E-57 T 12-10-2018 vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 Gene3D G3DSA:1.10.10.10 1 83 1.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 9.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 SUPERFAMILY SSF46785 1 81 1.46E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 SUPERFAMILY SSF53850 91 278 1.99E-16 T 12-10-2018 vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 Pfam PF03466 LysR substrate binding domain 98 264 3.1E-10 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00868 bffc41d7e9eaa87af980f74ef3cbaab3 295 Gene3D G3DSA:3.40.190.290 129 273 2.4E-6 T 12-10-2018 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF51717 357 631 1.57E-87 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:1.10.1240.10 650 738 2.9E-40 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02607 B12 binding domain 660 734 9.1E-26 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF52242 744 895 2.22E-45 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.20.20.330 2 341 2.0E-129 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02310 B12 binding domain 749 842 5.0E-18 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF47644 654 740 2.75E-29 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.40.50.280 745 896 1.2E-55 T 12-10-2018 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 PIRSF PIRSF000381 3 1197 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Pfam PF00809 Pterin binding enzyme 361 599 4.7E-59 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.10.196.10 909 1224 3.9E-144 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:1.10.288.10 938 1094 3.9E-144 T 12-10-2018 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 3.0E-81 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF56507 903 1225 1.23E-128 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 SMART SM01018 658 741 3.0E-45 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Gene3D G3DSA:3.20.20.20 342 643 7.8E-131 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 SUPERFAMILY SSF82282 7 400 6.93E-119 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 vfu_A03127 dc85e593564e9764c550abce05f122b9 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 2.5E-123 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_B01375 06620593f56b0d684cf74315c88c0594 111 Gene3D G3DSA:3.30.70.120 1 105 8.2E-36 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal vfu_B01375 06620593f56b0d684cf74315c88c0594 111 SUPERFAMILY SSF54913 4 105 1.0E-34 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta vfu_B01375 06620593f56b0d684cf74315c88c0594 111 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 2.2E-34 T 12-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 300 307 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 SUPERFAMILY SSF55804 3 141 4.06E-38 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 SUPERFAMILY SSF55594 293 377 1.18E-23 T 12-10-2018 IPR035895 HPr-like superfamily vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 Gene3D G3DSA:3.40.930.10 148 276 2.5E-5 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 Gene3D G3DSA:3.30.1340.10 291 376 1.2E-27 T 12-10-2018 IPR035895 HPr-like superfamily vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 Pfam PF00381 PTS HPr component phosphorylation site 293 372 1.3E-25 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 140 1.6E-30 T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 PRINTS PR00107 Phosphocarrier protein signature 328 343 5.6E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 PRINTS PR00107 Phosphocarrier protein signature 343 360 5.6E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 PRINTS PR00107 Phosphocarrier protein signature 300 316 5.6E-19 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 292 371 1.3E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 Gene3D G3DSA:3.40.930.10 1 142 2.9E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 329 344 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site vfu_B00275 cb19b3cf0fd621cae393b5ffef1c1c1a 377 SUPERFAMILY SSF55804 147 276 4.71E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 Gene3D G3DSA:2.60.40.10 141 225 6.5E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 PRINTS PR00969 Pili chaperone signature 118 133 5.8E-23 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 PRINTS PR00969 Pili chaperone signature 64 85 5.8E-23 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 PRINTS PR00969 Pili chaperone signature 94 111 5.8E-23 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 PRINTS PR00969 Pili chaperone signature 153 168 5.8E-23 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 PRINTS PR00969 Pili chaperone signature 15 24 5.8E-23 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 Gene3D G3DSA:2.60.40.10 16 137 1.8E-36 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 SUPERFAMILY SSF49354 10 136 9.42E-35 T 12-10-2018 IPR008962 PapD-like superfamily vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 158 217 1.3E-11 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 SUPERFAMILY SSF49584 130 221 3.27E-13 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily vfu_B01318 3aabc93c8c25387c290ba6baaa1b2107 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 14 137 4.7E-37 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 Pfam PF01678 Diaminopimelate epimerase 154 269 3.9E-32 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 Pfam PF01678 Diaminopimelate epimerase 5 125 1.1E-33 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 3.3E-102 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.755 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 Gene3D G3DSA:3.10.310.10 5 272 2.7E-106 T 12-10-2018 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 SUPERFAMILY SSF54506 138 274 5.69E-51 T 12-10-2018 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 SUPERFAMILY SSF54506 4 132 3.53E-49 T 12-10-2018 vfu_A00439 06a58ac09ede5f30ce506455555a669b 276 Gene3D G3DSA:3.10.310.10 117 263 2.7E-106 T 12-10-2018 vfu_B01067 cd5ec5546c1bea2a9a6818d15c1856db 89 Gene3D G3DSA:1.20.5.190 26 88 5.0E-10 T 12-10-2018 vfu_B01067 cd5ec5546c1bea2a9a6818d15c1856db 89 SUPERFAMILY SSF58042 27 88 4.45E-14 T 12-10-2018 vfu_B01067 cd5ec5546c1bea2a9a6818d15c1856db 89 Pfam PF04728 Lipoprotein leucine-zipper 30 89 2.2E-22 T 12-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 vfu_B01067 cd5ec5546c1bea2a9a6818d15c1856db 89 PIRSF PIRSF002855 1 89 3.3E-30 T 12-10-2018 IPR016367 Murein-lipoprotein vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 369 389 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 636 49.042 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 SMART SM00729 365 615 1.2E-4 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 SUPERFAMILY SSF102114 368 606 3.4E-11 T 12-10-2018 vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 22 634 2.7E-262 T 12-10-2018 IPR022946 Uncharacterised protein family UPF0313 vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 Gene3D G3DSA:3.80.30.20 364 623 1.1E-13 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 Pfam PF11842 Domain of unknown function (DUF3362) 583 726 2.1E-43 T 12-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 Pfam PF04055 Radical SAM superfamily 369 574 2.0E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02291 f4fa54201685e4b8d86d3236a297eb2f 781 Pfam PF08497 Radical SAM N-terminal 22 368 4.0E-143 T 12-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 SUPERFAMILY SSF57783 9 62 2.72E-14 T 12-10-2018 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 149 1.1E-11 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 65 99 1.8E-15 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 18 55 3.6E-14 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 Gene3D G3DSA:3.30.65.10 103 156 5.0E-5 T 12-10-2018 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 Gene3D G3DSA:3.30.65.10 60 102 1.3E-7 T 12-10-2018 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 Gene3D G3DSA:3.30.65.10 1 59 3.8E-9 T 12-10-2018 vfu_A00268 bd2a90a88f07a245ac7634f72720dc4e 192 SUPERFAMILY SSF57783 64 104 1.43E-12 T 12-10-2018 vfu_A02111 b301763ebcca82067103192be8a84860 342 Pfam PF02277 Phosphoribosyltransferase 2 340 1.9E-124 T 12-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 vfu_A02111 b301763ebcca82067103192be8a84860 342 Gene3D G3DSA:3.40.50.10210 51 323 4.7E-119 T 12-10-2018 vfu_A02111 b301763ebcca82067103192be8a84860 342 Gene3D G3DSA:1.10.1610.10 13 340 4.7E-119 T 12-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 vfu_A02111 b301763ebcca82067103192be8a84860 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 3.6E-126 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 vfu_A02111 b301763ebcca82067103192be8a84860 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 35.914 T 12-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 vfu_A02111 b301763ebcca82067103192be8a84860 342 SUPERFAMILY SSF52733 2 341 1.11E-109 T 12-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 vfu_B00893 5a55fcb728ab66ad38d66be4248b6e87 283 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 2 276 7.3E-52 T 12-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 Gene3D G3DSA:3.40.190.10 167 266 6.4E-71 T 12-10-2018 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 SUPERFAMILY SSF46785 1 84 8.71E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 SUPERFAMILY SSF53850 89 297 5.89E-30 T 12-10-2018 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 Gene3D G3DSA:1.10.10.10 1 86 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 Pfam PF03466 LysR substrate binding domain 92 290 7.0E-31 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 Gene3D G3DSA:3.40.190.10 91 301 6.4E-71 T 12-10-2018 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.8E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00637 6ee505b23ee97ae07ece589b077ce6a7 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00768 b0737bb2b7b9af2e750faa6600f4ca07 204 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 23 198 8.7E-33 T 12-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like vfu_B00768 b0737bb2b7b9af2e750faa6600f4ca07 204 Gene3D G3DSA:2.60.120.590 14 203 1.5E-71 T 12-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily vfu_B00768 b0737bb2b7b9af2e750faa6600f4ca07 204 SUPERFAMILY SSF51197 8 201 5.77E-70 T 12-10-2018 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 8.6E-132 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 SUPERFAMILY SSF52096 25 278 6.3E-82 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 5.2E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 5.2E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 5.2E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 5.2E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 5.2E-36 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 Gene3D G3DSA:3.90.226.10 25 284 2.0E-77 T 12-10-2018 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 Pfam PF01039 Carboxyl transferase domain 98 240 5.2E-14 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 vfu_B00914 f6144da9b90128bb7bfd1cd7bca38498 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 36.0 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.5E-168 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 Hamap MF_00268 Protein RecA [recA]. 5 329 50.267 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 ProSitePatterns PS00321 recA signature. 213 221 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 Gene3D G3DSA:3.30.250.10 268 326 1.6E-24 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 SUPERFAMILY SSF54752 269 325 2.09E-20 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 210 238 7.9E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 127 156 7.9E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 243 272 7.9E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 93 122 7.9E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 297 314 7.9E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 PRINTS PR00142 RecA protein signature 165 194 7.9E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 SMART SM00382 57 228 1.6E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 Gene3D G3DSA:3.40.50.300 26 267 7.5E-83 T 12-10-2018 vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 SUPERFAMILY SSF52540 4 266 5.17E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02979 4bd1cde1ddc1f947cd8b2582a7c69396 350 Pfam PF00154 recA bacterial DNA recombination protein 7 267 3.3E-142 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 vfu_B01235 d949d5cd5fb91c8e1d2b61c54d1dae5f 421 Pfam PF06134 L-rhamnose isomerase (RhaA) 6 419 8.3E-219 T 12-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 vfu_B01235 d949d5cd5fb91c8e1d2b61c54d1dae5f 421 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 421 252.13 T 12-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 vfu_B01235 d949d5cd5fb91c8e1d2b61c54d1dae5f 421 Gene3D G3DSA:3.20.20.150 2 421 7.9E-183 T 12-10-2018 vfu_B01235 d949d5cd5fb91c8e1d2b61c54d1dae5f 421 SUPERFAMILY SSF51658 8 418 3.32E-81 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily vfu_B01235 d949d5cd5fb91c8e1d2b61c54d1dae5f 421 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 7 419 2.9E-221 T 12-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 vfu_B01235 d949d5cd5fb91c8e1d2b61c54d1dae5f 421 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 11 420 4.0E-179 T 12-10-2018 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 SUPERFAMILY SSF53244 340 491 1.11E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Gene3D G3DSA:3.90.190.20 347 494 1.7E-55 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Gene3D G3DSA:3.40.1390.10 3 108 1.6E-29 T 12-10-2018 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 SUPERFAMILY SSF63418 8 108 1.31E-20 T 12-10-2018 IPR035911 MurE/MurF, N-terminal vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Pfam PF01225 Mur ligase family, catalytic domain 26 105 2.1E-10 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.368 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Pfam PF08245 Mur ligase middle domain 117 318 3.4E-51 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Gene3D G3DSA:3.40.1190.10 110 342 2.6E-80 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 7.1E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 25 491 2.5E-170 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 vfu_A02937 2899778ffb2f4690a7208bfa300d7f3c 495 SUPERFAMILY SSF53623 111 338 1.7E-74 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 4.0E-84 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 SUPERFAMILY SSF53784 3 312 6.02E-116 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 Gene3D G3DSA:3.40.50.460 143 252 3.9E-118 T 12-10-2018 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 7.4E-131 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 Gene3D G3DSA:3.40.50.450 4 287 3.9E-118 T 12-10-2018 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 Pfam PF00365 Phosphofructokinase 4 276 4.3E-111 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 PIRSF PIRSF000532 1 320 1.2E-129 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 vfu_A00576 cfc049805d671a59de7c63d213624bb2 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.634 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 SUPERFAMILY SSF53383 16 399 4.57E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 3.1E-148 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 Gene3D G3DSA:3.40.640.10 59 304 1.3E-150 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 70.168 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 Pfam PF00202 Aminotransferase class-III 22 399 7.8E-127 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 PIRSF PIRSF000521 172 402 5.2E-35 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 PIRSF PIRSF000521 25 155 4.6E-7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 2.4E-206 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 vfu_A00644 ffbf6ef7d6ac4b98b892be23777e875f 403 Gene3D G3DSA:3.90.1150.10 29 391 1.3E-150 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Pfam PF01568 Molydopterin dinucleotide binding domain 417 524 7.1E-30 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 527 9.0E-205 T 12-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Pfam PF00384 Molybdopterin oxidoreductase 1 330 1.1E-69 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:3.40.228.10 1 185 2.2E-135 T 12-10-2018 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 SUPERFAMILY SSF50692 407 544 9.95E-46 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 SUPERFAMILY SSF53706 1 421 3.01E-139 T 12-10-2018 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:3.40.50.740 186 373 2.2E-135 T 12-10-2018 vfu_A02052 51b7c5a5465fc7aa5981c253c8e1ac8a 558 Gene3D G3DSA:2.40.40.20 414 530 3.5E-43 T 12-10-2018 vfu_B00890 bb89470c3917bf994c224e55edd3d1af 157 SUPERFAMILY SSF55826 6 145 2.75E-27 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_B00890 bb89470c3917bf994c224e55edd3d1af 157 Pfam PF04073 Aminoacyl-tRNA editing domain 34 135 5.1E-17 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 vfu_B00890 bb89470c3917bf994c224e55edd3d1af 157 Gene3D G3DSA:3.90.960.10 14 152 1.9E-33 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 Gene3D G3DSA:3.90.650.10 436 526 1.0E-16 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 Gene3D G3DSA:1.10.8.750 153 213 1.6E-28 T 12-10-2018 vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 SUPERFAMILY SSF109736 155 220 3.14E-22 T 12-10-2018 vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 SUPERFAMILY SSF82697 1 151 1.52E-52 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 SUPERFAMILY SSF56042 432 524 6.54E-24 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 SUPERFAMILY SSF55326 221 428 3.84E-67 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 Gene3D G3DSA:3.30.1330.10 214 435 7.8E-43 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02713 2bb644704972c23fb32060650a87d8c2 528 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 522 3.5E-13 T 12-10-2018 IPR010918 PurM-like, C-terminal domain vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 96.215 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 2.8E-36 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 Gene3D G3DSA:3.40.50.300 8 332 2.4E-80 T 12-10-2018 vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 Gene3D G3DSA:1.20.1050.90 121 298 2.4E-80 T 12-10-2018 vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 SUPERFAMILY SSF52540 1 341 7.63E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00311 714373f081fd1845a2bf37d841fe7a98 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 1.8E-116 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 vfu_A02840 fd682703deb6b86cd437aac595711b04 335 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 326 3.4E-116 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 vfu_A02840 fd682703deb6b86cd437aac595711b04 335 Pfam PF00962 Adenosine/AMP deaminase 8 323 1.3E-74 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 vfu_A02840 fd682703deb6b86cd437aac595711b04 335 SUPERFAMILY SSF51556 3 321 1.95E-89 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A02840 fd682703deb6b86cd437aac595711b04 335 Hamap MF_01962 Adenine deaminase. 4 316 84.596 T 12-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 vfu_A02840 fd682703deb6b86cd437aac595711b04 335 Gene3D G3DSA:3.20.20.140 1 333 5.1E-105 T 12-10-2018 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.3E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 Gene3D G3DSA:3.40.190.290 89 291 5.1E-23 T 12-10-2018 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 Pfam PF03466 LysR substrate binding domain 89 287 1.7E-27 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 SUPERFAMILY SSF53850 89 288 1.36E-27 T 12-10-2018 vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 SUPERFAMILY SSF46785 1 107 2.05E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00035 4dc4f51bba579607fbc964565497adc1 295 Gene3D G3DSA:1.10.10.10 1 82 6.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 6.9E-52 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 SUPERFAMILY SSF51735 3 167 2.69E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 295 2.8E-29 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 6 297 6.3E-124 T 12-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 SUPERFAMILY SSF48179 168 298 7.71E-38 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 PIRSF PIRSF000103 1 300 1.2E-77 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 Gene3D G3DSA:3.40.50.720 1 168 7.7E-55 T 12-10-2018 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 Gene3D G3DSA:1.10.1040.10 169 299 3.9E-41 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B01433 b9228e6e4273c77716342fcbb4119a84 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Gene3D G3DSA:1.10.287.130 257 337 8.9E-27 T 12-10-2018 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Pfam PF00072 Response regulator receiver domain 650 759 5.9E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Gene3D G3DSA:3.40.50.2300 633 765 1.1E-38 T 12-10-2018 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SMART SM00448 648 761 6.1E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SMART SM00304 179 231 5.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Gene3D G3DSA:1.20.1480.50 145 251 2.1E-8 T 12-10-2018 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SMART SM00387 383 499 2.7E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 452 9.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 9.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 9.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 9.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SUPERFAMILY SSF55874 325 499 2.36E-44 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SUPERFAMILY SSF52172 514 627 1.01E-8 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SUPERFAMILY SSF47384 256 337 1.47E-22 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SUPERFAMILY SSF47226 744 902 7.72E-21 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SMART SM00388 271 336 2.5E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SUPERFAMILY SSF52172 647 765 1.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Pfam PF01627 Hpt domain 819 903 1.0E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SMART SM00073 809 907 7.1E-6 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 383 498 1.0E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Pfam PF00512 His Kinase A (phospho-acceptor) domain 272 336 1.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Gene3D G3DSA:1.20.120.160 797 911 3.6E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 13 156 3.4E-51 T 12-10-2018 IPR019247 Histidine kinase BarA, N-terminal vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 Gene3D G3DSA:3.30.565.10 338 502 6.8E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00841 d8a381f6caaa05a68c9a2ee957990c91 915 SUPERFAMILY SSF158472 181 228 1.44E-6 T 12-10-2018 vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 SUPERFAMILY SSF53686 3 313 2.36E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 2.2E-143 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 Gene3D G3DSA:3.40.50.1100 43 145 4.1E-126 T 12-10-2018 vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 9.0E-136 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.1E-67 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme vfu_A02635 4733d1d10e905c678d574652c6e8b25d 322 Gene3D G3DSA:3.40.50.1100 12 306 4.1E-126 T 12-10-2018 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 201 3.9E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 139 206 1.4E-9 T 12-10-2018 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 5.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 5.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 5.5E-5 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 Gene3D G3DSA:1.20.120.1600 24 110 5.9E-58 T 12-10-2018 vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 Gene3D G3DSA:3.40.50.1000 12 232 5.9E-58 T 12-10-2018 IPR023214 HAD superfamily vfu_A00442 a68fa43788b8a92734bda2ae5b95d6d1 239 SUPERFAMILY SSF56784 9 238 6.24E-39 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 9.7E-34 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 SUPERFAMILY SSF48179 191 287 3.06E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 Gene3D G3DSA:1.20.5.100 194 220 3.5E-20 T 12-10-2018 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.1E-104 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.8E-26 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 Gene3D G3DSA:3.40.50.720 222 388 3.2E-68 T 12-10-2018 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 SUPERFAMILY SSF52413 283 387 2.88E-28 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 SUPERFAMILY SSF51735 1 194 2.66E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 378 5.8E-9 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 Gene3D G3DSA:3.40.50.720 1 193 4.4E-60 T 12-10-2018 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 SMART SM00984 300 387 1.1E-15 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 PIRSF PIRSF000124 1 388 3.8E-140 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 PIRSF PIRSF500134 338 388 0.077 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 vfu_A00134 92a7d8b465290c7a33e7de666add5677 388 PIRSF PIRSF500134 1 343 2.6E-124 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 SUPERFAMILY SSF52172 4 163 9.53E-26 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 Gene3D G3DSA:1.10.10.10 148 208 1.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 SMART SM00448 5 119 5.5E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.9E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 SMART SM00421 147 204 7.3E-23 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 Pfam PF00072 Response regulator receiver domain 7 120 4.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 Gene3D G3DSA:3.40.50.2300 3 132 2.5E-26 T 12-10-2018 vfu_A00552 d0a9e0ee931851b53068a598b55661d5 209 SUPERFAMILY SSF46894 141 206 8.84E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:3.40.1110.10 390 512 1.2E-80 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 SUPERFAMILY SSF81653 192 287 7.98E-22 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 162 660 5.4E-70 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 381 387 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 137 683 3.1E-147 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:3.40.50.1000 360 630 1.2E-80 T 12-10-2018 IPR023214 HAD superfamily vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 SUPERFAMILY SSF56784 378 677 6.87E-51 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 ProSitePatterns PS01229 Hypothetical cof family signature 2. 581 603 - T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 Pfam PF00702 haloacid dehalogenase-like hydrolase 375 595 5.6E-37 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 600 7.0E-27 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 616 7.0E-27 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 379 393 7.0E-27 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 516 7.0E-27 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 237 251 7.0E-27 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 538 7.0E-27 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 Pfam PF00122 E1-E2 ATPase 190 358 4.4E-34 T 12-10-2018 vfu_A02104 32fe25102cc65e18ee615be7f862c354 686 Gene3D G3DSA:2.70.150.20 181 290 1.1E-25 T 12-10-2018 vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 0.0062 T 12-10-2018 vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 Gene3D G3DSA:3.40.50.720 1 239 9.0E-78 T 12-10-2018 vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 Pfam PF00106 short chain dehydrogenase 3 188 1.3E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 9.2E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.4E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00923 2ede415ef46c0310045e36fa911cc992 239 SUPERFAMILY SSF51735 3 223 1.3E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 SUPERFAMILY SSF53822 65 340 2.16E-64 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 Gene3D G3DSA:3.40.50.2300 165 337 7.1E-70 T 12-10-2018 vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 Gene3D G3DSA:1.10.260.40 4 63 1.6E-19 T 12-10-2018 vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 SMART SM00354 5 75 1.8E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 12-10-2018 vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 SUPERFAMILY SSF47413 4 63 5.89E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 1.6E-14 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 318 1.0E-43 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_A03017 5803b087162675c7131771abc2ca3d5f 340 Gene3D G3DSA:3.40.50.2300 66 332 7.1E-70 T 12-10-2018 vfu_B00028 1de1a2303369e828f63a20d12c9f753d 320 SUPERFAMILY SSF46785 12 95 3.89E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00028 1de1a2303369e828f63a20d12c9f753d 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.2E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00028 1de1a2303369e828f63a20d12c9f753d 320 SUPERFAMILY SSF53850 99 302 8.69E-18 T 12-10-2018 vfu_B00028 1de1a2303369e828f63a20d12c9f753d 320 Gene3D G3DSA:3.40.190.290 101 308 2.3E-11 T 12-10-2018 vfu_B00028 1de1a2303369e828f63a20d12c9f753d 320 Gene3D G3DSA:1.10.10.10 11 99 4.6E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00028 1de1a2303369e828f63a20d12c9f753d 320 Pfam PF03466 LysR substrate binding domain 99 293 4.9E-15 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 SUPERFAMILY SSF58104 318 627 6.54E-75 T 12-10-2018 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 SMART SM00283 365 626 8.9E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 Gene3D G3DSA:1.10.287.950 296 628 9.1E-75 T 12-10-2018 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 Pfam PF02743 Cache domain 41 258 6.6E-22 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 594 4.3E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 Gene3D G3DSA:3.30.450.20 66 171 1.5E-26 T 12-10-2018 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 Pfam PF00672 HAMP domain 300 347 2.2E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 Gene3D G3DSA:3.30.450.20 53 267 1.5E-26 T 12-10-2018 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 SMART SM00304 296 350 3.6E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 1.8E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 1.8E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01032 7395367e3f1eedf2b0fda1f42aced1a7 628 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.8E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01299 b6297179c27567c98887babb1ca60308 504 SUPERFAMILY SSF141868 242 492 5.49E-73 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01299 b6297179c27567c98887babb1ca60308 504 SMART SM00052 236 483 8.9E-81 T 12-10-2018 IPR001633 EAL domain vfu_B01299 b6297179c27567c98887babb1ca60308 504 Gene3D G3DSA:3.20.20.450 235 496 1.7E-77 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01299 b6297179c27567c98887babb1ca60308 504 Pfam PF12792 CSS motif domain associated with EAL 18 211 3.0E-30 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain vfu_B01299 b6297179c27567c98887babb1ca60308 504 Pfam PF00563 EAL domain 243 478 3.8E-64 T 12-10-2018 IPR001633 EAL domain vfu_B01317 62d793b838bef7dabd57cbb116986945 431 SUPERFAMILY SSF49401 261 429 3.11E-7 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_B01317 62d793b838bef7dabd57cbb116986945 431 PIRSF PIRSF029766 10 431 5.1E-119 T 12-10-2018 IPR011228 Uncharacterised conserved protein UCP029766 vfu_B01317 62d793b838bef7dabd57cbb116986945 431 Gene3D G3DSA:2.60.40.1090 263 429 6.8E-6 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_B01317 62d793b838bef7dabd57cbb116986945 431 Pfam PF00419 Fimbrial protein 253 431 1.0E-34 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 414 562 6.8E-19 T 12-10-2018 IPR000160 GGDEF domain vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 SMART SM00267 404 568 2.0E-28 T 12-10-2018 IPR000160 GGDEF domain vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Gene3D G3DSA:3.30.450.20 112 206 7.9E-11 T 12-10-2018 vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 SUPERFAMILY SSF141868 585 833 6.67E-83 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Pfam PF00563 EAL domain 586 821 5.5E-68 T 12-10-2018 IPR001633 EAL domain vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Pfam PF02743 Cache domain 136 316 3.1E-17 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Pfam PF00990 Diguanylate cyclase, GGDEF domain 417 561 7.8E-27 T 12-10-2018 IPR000160 GGDEF domain vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Gene3D G3DSA:3.20.20.450 581 837 4.2E-90 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 SUPERFAMILY SSF55073 420 562 6.43E-29 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Gene3D G3DSA:3.30.70.270 414 580 2.1E-31 T 12-10-2018 vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 Gene3D G3DSA:1.20.1480.50 319 413 9.0E-6 T 12-10-2018 vfu_A00493 e98afb3cf264aa6bd268f30954f09d54 840 SMART SM00052 578 826 4.2E-101 T 12-10-2018 IPR001633 EAL domain vfu_A00154 872bce6b4df72eebfcb19fc4e5a2b8f9 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00154 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Pfam PF00471 Ribosomal protein L33 7 53 1.0E-16 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00154 872bce6b4df72eebfcb19fc4e5a2b8f9 55 SUPERFAMILY SSF57829 1 53 6.1E-19 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 vfu_A00154 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Gene3D G3DSA:2.20.28.120 1 55 6.4E-30 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00154 872bce6b4df72eebfcb19fc4e5a2b8f9 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 3.2E-25 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00154 872bce6b4df72eebfcb19fc4e5a2b8f9 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.671 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 120 128 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 Gene3D G3DSA:2.60.120.10 303 373 1.2E-88 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 Pfam PF01238 Phosphomannose isomerase type I 211 355 1.2E-19 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 Pfam PF01238 Phosphomannose isomerase type I 2 159 4.8E-32 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 SUPERFAMILY SSF51182 1 359 7.51E-77 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PIRSF PIRSF001480 1 396 5.8E-86 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 357 1.4E-55 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 77 98 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 120 143 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 31 46 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 276 295 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 257 276 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 PRINTS PR00714 Phosphomannose isomerase type I signature 238 257 2.0E-47 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 Gene3D G3DSA:1.10.441.10 144 302 1.2E-88 T 12-10-2018 vfu_B00529 20eab932f9dba86ec5a530f7d22ff0c7 397 Gene3D G3DSA:2.60.120.10 7 277 1.2E-88 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 Pfam PF13393 Histidyl-tRNA synthetase 6 288 3.4E-41 T 12-10-2018 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 2 386 5.9E-152 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 Gene3D G3DSA:3.30.930.10 1 298 7.0E-113 T 12-10-2018 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 SUPERFAMILY SSF52954 303 396 3.44E-26 T 12-10-2018 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 396 30.729 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 SUPERFAMILY SSF55681 1 297 5.97E-100 T 12-10-2018 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 PIRSF PIRSF001549 1 398 8.2E-119 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 Gene3D G3DSA:3.40.50.800 302 398 2.1E-26 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily vfu_A02774 244b21ccf13d2aad9f894c66a0389256 398 Pfam PF03129 Anticodon binding domain 315 395 7.4E-12 T 12-10-2018 IPR004154 Anticodon-binding vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 Pfam PF09397 Ftsk gamma domain 897 957 4.9E-26 T 12-10-2018 IPR018541 FtsK gamma domain vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 SUPERFAMILY SSF52540 552 864 1.22E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 SMART SM00843 895 960 2.1E-38 T 12-10-2018 IPR018541 FtsK gamma domain vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 Gene3D G3DSA:3.40.50.300 575 877 6.3E-120 T 12-10-2018 vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 SUPERFAMILY SSF46785 895 958 4.15E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 Gene3D G3DSA:1.10.10.10 889 956 1.3E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 Gene3D G3DSA:3.30.980.40 470 574 6.2E-33 T 12-10-2018 vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 Pfam PF01580 FtsK/SpoIIIE family 578 791 1.9E-70 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 vfu_A02411 176b9b4b1c457f99e43545a4645b9b48 963 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 6.1E-42 T 12-10-2018 IPR025199 DNA translocase FtsK, 4TM region vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 152 199 9.6E-7 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 8.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 8.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 SUPERFAMILY SSF48498 82 192 6.45E-5 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 SUPERFAMILY SSF46689 4 83 7.56E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 Gene3D G3DSA:1.10.357.10 64 200 3.8E-26 T 12-10-2018 vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 Gene3D G3DSA:1.10.10.60 3 61 3.2E-17 T 12-10-2018 vfu_A02181 76aab70447f3c0e417ba51574abaa460 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.6E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00113 9e930d34642459d7296d9cd89394ff12 197 Gene3D G3DSA:2.40.50.140 1 68 4.8E-16 T 12-10-2018 vfu_B00113 9e930d34642459d7296d9cd89394ff12 197 Pfam PF06961 Protein of unknown function (DUF1294) 106 160 2.8E-19 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 vfu_B00113 9e930d34642459d7296d9cd89394ff12 197 SMART SM00357 4 68 1.7E-5 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_B00113 9e930d34642459d7296d9cd89394ff12 197 SUPERFAMILY SSF50249 3 66 4.16E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B00113 9e930d34642459d7296d9cd89394ff12 197 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 6.3E-11 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A02055 ed72b67ae796127fca0846198193e843 151 SUPERFAMILY SSF53163 5 146 2.62E-32 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily vfu_A02055 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 56 66 1.4E-6 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 vfu_A02055 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 4 16 1.4E-6 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 vfu_A02055 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 67 83 1.4E-6 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 vfu_A02055 ed72b67ae796127fca0846198193e843 151 PRINTS PR00446 Hydrogen uptake protein signature 16 27 1.4E-6 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 vfu_A02055 ed72b67ae796127fca0846198193e843 151 Pfam PF01750 Hydrogenase maturation protease 33 136 7.1E-22 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 vfu_A02055 ed72b67ae796127fca0846198193e843 151 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 139 2.5E-33 T 12-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 vfu_A02055 ed72b67ae796127fca0846198193e843 151 Gene3D G3DSA:3.40.50.1450 1 151 1.5E-48 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily vfu_A02055 ed72b67ae796127fca0846198193e843 151 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 4 146 1.3E-46 T 12-10-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 vfu_A03065 216fda34c23e87dcc5b03357ebf4703a 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 3.0E-37 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 vfu_A03065 216fda34c23e87dcc5b03357ebf4703a 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.9E-42 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 vfu_A03065 216fda34c23e87dcc5b03357ebf4703a 91 Gene3D G3DSA:1.10.3880.10 1 91 1.4E-39 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 vfu_A03065 216fda34c23e87dcc5b03357ebf4703a 91 SUPERFAMILY SSF111148 1 90 3.53E-41 T 12-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 vfu_A03065 216fda34c23e87dcc5b03357ebf4703a 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.606 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 vfu_A03065 216fda34c23e87dcc5b03357ebf4703a 91 PIRSF PIRSF029827 1 90 9.3E-44 T 12-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 vfu_A01483 389c7dadbc9e080f9cd01d24dbea2493 268 Gene3D G3DSA:3.40.50.300 2 260 2.5E-68 T 12-10-2018 vfu_A01483 389c7dadbc9e080f9cd01d24dbea2493 268 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01483 389c7dadbc9e080f9cd01d24dbea2493 268 Pfam PF00005 ABC transporter 25 172 4.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01483 389c7dadbc9e080f9cd01d24dbea2493 268 SUPERFAMILY SSF52540 9 235 8.74E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01483 389c7dadbc9e080f9cd01d24dbea2493 268 SMART SM00382 33 230 7.7E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 PIRSF PIRSF003095 1 433 1.9E-129 T 12-10-2018 IPR005215 Trigger factor GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.1E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Gene3D G3DSA:1.10.3120.10 116 417 8.2E-107 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 6.9E-43 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Gene3D G3DSA:3.10.50.40 150 246 8.2E-107 T 12-10-2018 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 SUPERFAMILY SSF102735 1 130 8.89E-42 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Gene3D G3DSA:3.30.70.1050 1 115 9.3E-42 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Hamap MF_00303 Trigger factor [tig]. 1 418 21.719 T 12-10-2018 IPR005215 Trigger factor GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 SUPERFAMILY SSF109998 248 429 4.12E-49 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.1E-39 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 TIGRFAM TIGR00115 tig: trigger factor 11 412 7.5E-143 T 12-10-2018 IPR005215 Trigger factor GO:0015031 vfu_A02431 d48a21c9adb5403f096859be30bd5276 434 SUPERFAMILY SSF54534 90 241 6.68E-36 T 12-10-2018 vfu_A01557 918472000aa91e740538482b5f8f1fc8 301 Gene3D G3DSA:3.30.950.10 160 289 7.6E-37 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 vfu_A01557 918472000aa91e740538482b5f8f1fc8 301 SUPERFAMILY SSF53790 41 282 1.83E-70 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 vfu_A01557 918472000aa91e740538482b5f8f1fc8 301 Gene3D G3DSA:3.40.1010.10 42 159 4.0E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 vfu_A01557 918472000aa91e740538482b5f8f1fc8 301 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 124 157 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A01557 918472000aa91e740538482b5f8f1fc8 301 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 44 278 5.7E-87 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A01557 918472000aa91e740538482b5f8f1fc8 301 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 46 254 5.9E-45 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 vfu_A01523 b2b18ea7c30f1a5f270ac382161e7edb 461 Gene3D G3DSA:3.40.50.12780 12 345 4.1E-19 T 12-10-2018 vfu_A01523 b2b18ea7c30f1a5f270ac382161e7edb 461 SUPERFAMILY SSF56801 19 456 5.89E-51 T 12-10-2018 vfu_A01523 b2b18ea7c30f1a5f270ac382161e7edb 461 Pfam PF00501 AMP-binding enzyme 132 297 3.4E-9 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A01523 b2b18ea7c30f1a5f270ac382161e7edb 461 Pfam PF13193 AMP-binding enzyme C-terminal domain 361 444 8.3E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A01523 b2b18ea7c30f1a5f270ac382161e7edb 461 Gene3D G3DSA:3.30.300.30 346 452 1.2E-14 T 12-10-2018 vfu_A00305 4c71305d858dbfcd0df05dc4c4405c7c 397 Pfam PF00155 Aminotransferase class I and II 50 377 5.9E-25 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A00305 4c71305d858dbfcd0df05dc4c4405c7c 397 SUPERFAMILY SSF53383 8 392 1.38E-58 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A00305 4c71305d858dbfcd0df05dc4c4405c7c 397 Gene3D G3DSA:3.40.640.10 1 395 2.0E-135 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 Gene3D G3DSA:1.10.8.410 329 379 9.9E-22 T 12-10-2018 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 Gene3D G3DSA:1.20.1330.10 44 328 3.1E-78 T 12-10-2018 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 Gene3D G3DSA:3.30.70.2120 174 277 3.1E-78 T 12-10-2018 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 Pfam PF07196 Flagellin hook IN motif 197 246 3.2E-9 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 8.7E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 PRINTS PR00207 Flagellin signature 76 95 4.7E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 PRINTS PR00207 Flagellin signature 37 54 4.7E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 PRINTS PR00207 Flagellin signature 111 134 4.7E-26 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 SUPERFAMILY SSF64518 1 379 1.57E-99 T 12-10-2018 vfu_A01132 369411ac6aa6c2e8b67057c57ab7765e 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.9E-44 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_B01055 7a9eba80deb312abbc5b639b2bee992f 322 SUPERFAMILY SSF56219 2 313 1.18E-34 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_B01055 7a9eba80deb312abbc5b639b2bee992f 322 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 37 305 6.5E-17 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase vfu_B01055 7a9eba80deb312abbc5b639b2bee992f 322 Gene3D G3DSA:3.60.10.10 3 317 1.4E-31 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_A03095 ea708e8ffa4325c09fef59e16ab788b2 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 1.6E-52 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 vfu_A03095 ea708e8ffa4325c09fef59e16ab788b2 275 Gene3D G3DSA:3.60.110.10 1 269 4.4E-89 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A03095 ea708e8ffa4325c09fef59e16ab788b2 275 SUPERFAMILY SSF56317 3 263 1.19E-77 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A03095 ea708e8ffa4325c09fef59e16ab788b2 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF56059 673 932 4.6E-104 T 12-10-2018 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SMART SM01096 424 547 1.2E-75 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF48108 396 554 2.09E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF52335 936 1071 1.31E-34 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF56059 128 401 3.01E-108 T 12-10-2018 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.386 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 7.1E-38 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 6.3E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF52440 556 675 1.22E-49 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.40.50.20 1 116 1.4E-50 T 12-10-2018 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.40.50.20 554 662 1.1E-49 T 12-10-2018 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SUPERFAMILY SSF52440 1 127 3.45E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 SMART SM00851 955 1041 8.0E-26 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 9.4E-41 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.30.470.20 119 403 1.5E-128 T 12-10-2018 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.40.50.1380 937 1072 1.8E-33 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.101 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:1.10.1030.10 404 553 6.5E-52 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Pfam PF02142 MGS-like domain 956 1041 6.5E-16 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A02921 6e86c30be129d35d371bec309ed2eacf 1076 Gene3D G3DSA:3.30.470.20 665 934 1.5E-125 T 12-10-2018 vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 Gene3D G3DSA:3.90.650.10 154 333 2.9E-50 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 SUPERFAMILY SSF56042 157 328 4.93E-43 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 149 7.6E-14 T 12-10-2018 IPR016188 PurM-like, N-terminal domain vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 Gene3D G3DSA:3.30.1330.10 8 153 3.8E-46 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 161 304 3.6E-26 T 12-10-2018 IPR010918 PurM-like, C-terminal domain vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 6 333 1.7E-127 T 12-10-2018 IPR011854 Carbamoyl dehydratase HypE vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 PIRSF PIRSF005644 2 333 2.5E-118 T 12-10-2018 IPR011854 Carbamoyl dehydratase HypE vfu_A02045 6e1c9916311cb224bac84454d1713f6e 333 SUPERFAMILY SSF55326 4 150 3.49E-28 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF13426 PAS domain 219 317 6.2E-9 T 12-10-2018 IPR000014 PAS domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.30.450.20 70 198 2.0E-13 T 12-10-2018 vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.30.450.20 199 317 3.0E-17 T 12-10-2018 vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.20.20.450 492 752 1.4E-76 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 490 1.2E-32 T 12-10-2018 IPR000160 GGDEF domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF55785 71 194 4.54E-12 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00267 319 491 1.1E-42 T 12-10-2018 IPR000160 GGDEF domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF55073 335 492 6.2E-40 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00052 503 750 3.4E-66 T 12-10-2018 IPR001633 EAL domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF08448 PAS fold 89 197 1.7E-6 T 12-10-2018 IPR013656 PAS fold-4 vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Gene3D G3DSA:3.30.70.270 320 491 4.8E-45 T 12-10-2018 vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00091 208 274 9.9E-4 T 12-10-2018 IPR000014 PAS domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SMART SM00091 83 150 0.0017 T 12-10-2018 IPR000014 PAS domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF00563 EAL domain 511 745 3.2E-59 T 12-10-2018 IPR001633 EAL domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF141868 509 756 1.11E-70 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 206 323 9.5E-13 T 12-10-2018 IPR000014 PAS domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 81 203 3.6E-8 T 12-10-2018 IPR000014 PAS domain vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 SUPERFAMILY SSF55785 193 317 1.68E-18 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00387 9a518abc1cd8f07f6f78cbc32224a40b 761 Pfam PF00990 Diguanylate cyclase, GGDEF domain 330 487 3.2E-35 T 12-10-2018 IPR000160 GGDEF domain vfu_B00619 705da2e98080260280cee40dac1ce99b 155 Pfam PF13404 AsnC-type helix-turn-helix domain 5 46 8.4E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00619 705da2e98080260280cee40dac1ce99b 155 SUPERFAMILY SSF54909 71 153 3.86E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00619 705da2e98080260280cee40dac1ce99b 155 SMART SM00344 5 114 4.5E-18 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B00619 705da2e98080260280cee40dac1ce99b 155 SUPERFAMILY SSF46785 4 61 3.52E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00619 705da2e98080260280cee40dac1ce99b 155 Gene3D G3DSA:3.30.70.920 57 149 3.5E-11 T 12-10-2018 vfu_B00619 705da2e98080260280cee40dac1ce99b 155 Gene3D G3DSA:1.10.10.10 6 56 1.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00619 705da2e98080260280cee40dac1ce99b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 5.1E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00619 705da2e98080260280cee40dac1ce99b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 5.1E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00619 705da2e98080260280cee40dac1ce99b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 5.1E-13 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00619 705da2e98080260280cee40dac1ce99b 155 Pfam PF01037 Lrp/AsnC ligand binding domain 80 145 2.7E-11 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 240 4.5E-74 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 SUPERFAMILY SSF88659 161 241 6.92E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 Gene3D G3DSA:1.10.1740.10 13 98 4.1E-19 T 12-10-2018 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 240 1.1E-24 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 Pfam PF04542 Sigma-70 region 2 28 101 9.6E-10 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 210 236 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 SUPERFAMILY SSF88659 102 164 4.8E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 193 205 1.5E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 210 225 1.5E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 225 236 1.5E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 PRINTS PR00046 Major sigma-70 factor signature 55 68 1.5E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 Gene3D G3DSA:1.20.140.160 99 242 9.0E-33 T 12-10-2018 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 Pfam PF04545 Sigma-70, region 4 191 236 1.2E-8 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A01386 145c67ff3436c3b22193fcb1b9bf2611 242 SUPERFAMILY SSF88946 23 100 1.75E-17 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 Gene3D G3DSA:2.40.50.100 245 374 2.9E-17 T 12-10-2018 vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 SMART SM00382 29 217 5.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 Gene3D G3DSA:3.40.50.300 1 244 9.6E-72 T 12-10-2018 vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 SUPERFAMILY SSF52540 4 249 6.65E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 Gene3D G3DSA:2.40.50.140 291 361 2.9E-17 T 12-10-2018 vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 Pfam PF00005 ABC transporter 21 162 1.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01222 ca0994f766e4bf9aa89619ae828a40e8 380 SUPERFAMILY SSF50331 243 376 5.35E-19 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_A02487 23d2e72ef4b883c930671def43ead152 138 Pfam PF01641 SelR domain 15 132 8.5E-52 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_A02487 23d2e72ef4b883c930671def43ead152 138 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 9 134 36.637 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_A02487 23d2e72ef4b883c930671def43ead152 138 Gene3D G3DSA:2.170.150.20 1 137 1.3E-59 T 12-10-2018 vfu_A02487 23d2e72ef4b883c930671def43ead152 138 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 135 2.4E-55 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_A02487 23d2e72ef4b883c930671def43ead152 138 SUPERFAMILY SSF51316 9 136 7.85E-57 T 12-10-2018 IPR011057 Mss4-like superfamily vfu_A01829 a0526ee9eda29a0b5b49a32c095194f5 345 SUPERFAMILY SSF56529 77 335 9.62E-55 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 vfu_A01829 a0526ee9eda29a0b5b49a32c095194f5 345 Gene3D G3DSA:3.90.850.10 1 338 3.2E-137 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 vfu_A01829 a0526ee9eda29a0b5b49a32c095194f5 345 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 83 334 8.1E-40 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 vfu_A00023 3e3e5aabc058786c361d965808159190 353 Gene3D G3DSA:3.40.50.300 102 275 9.6E-50 T 12-10-2018 vfu_A00023 3e3e5aabc058786c361d965808159190 353 Gene3D G3DSA:2.40.50.140 35 101 2.3E-21 T 12-10-2018 vfu_A00023 3e3e5aabc058786c361d965808159190 353 Pfam PF03193 RsgA GTPase 99 276 4.0E-57 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 vfu_A00023 3e3e5aabc058786c361d965808159190 353 Gene3D G3DSA:1.10.40.50 276 350 3.9E-25 T 12-10-2018 vfu_A00023 3e3e5aabc058786c361d965808159190 353 SUPERFAMILY SSF52540 113 336 6.85E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00023 3e3e5aabc058786c361d965808159190 353 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 340 37.473 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 vfu_A00023 3e3e5aabc058786c361d965808159190 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 8.1E-89 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 vfu_B01431 89f15d9892bfc3cb00e90c91f78cde00 274 Gene3D G3DSA:3.90.226.10 17 274 1.3E-78 T 12-10-2018 vfu_B01431 89f15d9892bfc3cb00e90c91f78cde00 274 SUPERFAMILY SSF52096 18 273 8.56E-77 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01431 89f15d9892bfc3cb00e90c91f78cde00 274 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 115 135 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 vfu_B01431 89f15d9892bfc3cb00e90c91f78cde00 274 Pfam PF00378 Enoyl-CoA hydratase/isomerase 27 274 4.6E-55 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 Gene3D G3DSA:3.40.50.720 1 332 2.2E-101 T 12-10-2018 vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 3.0E-32 T 12-10-2018 vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 3.0E-32 T 12-10-2018 vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 3.0E-32 T 12-10-2018 vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 3.0E-32 T 12-10-2018 vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 322 5.0E-60 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A00124 a17826c5bcd6682dccdd0c2eec1159aa 336 SUPERFAMILY SSF51735 1 330 4.54E-92 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 SUPERFAMILY SSF54913 225 297 1.45E-20 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 Gene3D G3DSA:3.40.190.10 102 191 3.1E-69 T 12-10-2018 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.058 T 12-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 Pfam PF08029 HisG, C-terminal domain 222 295 4.7E-24 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 SUPERFAMILY SSF53850 5 222 1.45E-65 T 12-10-2018 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 3.0E-45 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 Gene3D G3DSA:3.30.70.120 225 298 1.4E-32 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 Gene3D G3DSA:3.40.190.10 6 219 3.1E-69 T 12-10-2018 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 7.1E-55 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 vfu_A01591 90dce841a2c5d54d387bb0bc20439dc1 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 205 297 1.1E-27 T 12-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 3.3E-53 T 12-10-2018 vfu_B00859 b7378423e4445dd370671d6836c26337 432 Gene3D G3DSA:1.10.3860.10 1 424 1.5E-140 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_B00859 b7378423e4445dd370671d6836c26337 432 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 2.2E-130 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 vfu_B00859 b7378423e4445dd370671d6836c26337 432 SUPERFAMILY SSF118215 9 407 2.35E-121 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_B00228 c3e3f187c68fe4b1e5fa989ab27be395 170 Pfam PF05036 Sporulation related domain 79 152 7.9E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 vfu_B00228 c3e3f187c68fe4b1e5fa989ab27be395 170 SUPERFAMILY SSF110997 78 141 1.96E-8 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_B00228 c3e3f187c68fe4b1e5fa989ab27be395 170 Gene3D G3DSA:3.30.70.1070 66 161 2.3E-22 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_A00742 b73025a075713c629874a4a97ac3e729 164 Pfam PF02470 MlaD protein 39 118 5.3E-20 T 12-10-2018 IPR003399 Mce/MlaD vfu_A00742 b73025a075713c629874a4a97ac3e729 164 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 3.6E-55 T 12-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 Gene3D G3DSA:3.30.450.20 77 179 1.6E-17 T 12-10-2018 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 Pfam PF00672 HAMP domain 313 359 5.1E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 Pfam PF02743 Cache domain 84 271 3.2E-13 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 Gene3D G3DSA:1.10.287.950 309 640 7.5E-68 T 12-10-2018 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 Gene3D G3DSA:3.30.450.20 180 282 1.6E-17 T 12-10-2018 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 SMART SM00304 309 363 2.3E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 SMART SM00283 378 639 6.4E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 604 1.4E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02229 ff227e2ca670a0e49f294ee2a487c632 640 SUPERFAMILY SSF58104 331 640 2.75E-71 T 12-10-2018 vfu_A00650 6944baa1414f5bd25c41e48eec14f790 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 66 5.2E-34 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 vfu_A00650 6944baa1414f5bd25c41e48eec14f790 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 7.0E-24 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 vfu_A00650 6944baa1414f5bd25c41e48eec14f790 69 PIRSF PIRSF006169 1 69 2.3E-34 T 12-10-2018 IPR010648 Uncharacterised protein family UPF0270 vfu_A00650 6944baa1414f5bd25c41e48eec14f790 69 Gene3D G3DSA:1.10.10.610 1 69 2.3E-29 T 12-10-2018 IPR036685 YehU-like superfamily vfu_A00650 6944baa1414f5bd25c41e48eec14f790 69 SUPERFAMILY SSF118001 1 66 6.41E-28 T 12-10-2018 IPR036685 YehU-like superfamily vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 Gene3D G3DSA:3.90.1280.10 225 283 3.4E-20 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 SUPERFAMILY SSF118352 223 281 2.49E-18 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 PIRSF PIRSF005261 1 284 4.3E-72 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 Gene3D G3DSA:3.55.30.10 1 175 7.3E-65 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 Pfam PF01430 Hsp33 protein 5 272 6.5E-82 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 SUPERFAMILY SSF64397 4 231 8.11E-78 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 32.503 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 vfu_A00507 eb56bae477c8d34146cac012fe0cd7e1 291 Gene3D G3DSA:1.10.287.480 178 224 1.1E-22 T 12-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 SUPERFAMILY SSF46689 1 69 3.15E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 197 9.1E-9 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 Gene3D G3DSA:1.10.357.10 60 198 4.3E-32 T 12-10-2018 vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 5.5E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A01497 8bb7918af5aaf0b93f56f8535879055b 199 Gene3D G3DSA:1.10.10.60 2 56 9.2E-20 T 12-10-2018 vfu_A02588 6e327fc5c54d3a6219eb55b9807d7783 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 27.07 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 vfu_A02588 6e327fc5c54d3a6219eb55b9807d7783 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 1.0E-106 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 vfu_A02588 6e327fc5c54d3a6219eb55b9807d7783 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 1.1E-141 T 12-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 Gene3D G3DSA:1.10.3210.10 436 575 3.4E-9 T 12-10-2018 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF81301 39 172 6.54E-20 T 12-10-2018 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 868 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 SMART SM00471 447 594 5.0E-10 T 12-10-2018 IPR003607 HD/PDEase domain vfu_A01067 22be115f9a794a1c65996a6857e86131 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 2.7E-36 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF55021 689 750 9.92E-9 T 12-10-2018 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 PIRSF PIRSF006288 7 874 0.0 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 Pfam PF01909 Nucleotidyltransferase domain 57 114 2.0E-7 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF109604 418 556 1.69E-13 T 12-10-2018 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 Pfam PF01966 HD domain 452 584 2.7E-13 T 12-10-2018 IPR006674 HD domain vfu_A01067 22be115f9a794a1c65996a6857e86131 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 339.954 T 12-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF81593 186 310 5.18E-10 T 12-10-2018 vfu_A01067 22be115f9a794a1c65996a6857e86131 874 SUPERFAMILY SSF55021 796 854 1.18E-7 T 12-10-2018 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02996 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.3E-9 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 3.3E-9 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 3.3E-9 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 315 7.3E-41 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 Gene3D G3DSA:3.50.50.100 1 378 6.7E-78 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 6.2E-15 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 6.2E-15 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 6.2E-15 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 6.2E-15 T 12-10-2018 vfu_B00014 7ced9418a4029b2d177e6ddfbf6ec903 400 SUPERFAMILY SSF51905 1 336 4.96E-26 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00328 0a863328768c3c0f1054b66c32fd8501 382 Gene3D G3DSA:1.20.1090.10 168 375 2.8E-62 T 12-10-2018 vfu_A00328 0a863328768c3c0f1054b66c32fd8501 382 Gene3D G3DSA:3.40.50.1970 1 166 3.4E-41 T 12-10-2018 vfu_A00328 0a863328768c3c0f1054b66c32fd8501 382 SUPERFAMILY SSF56796 4 374 1.02E-103 T 12-10-2018 vfu_A00328 0a863328768c3c0f1054b66c32fd8501 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 365 1.0E-103 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_A00328 0a863328768c3c0f1054b66c32fd8501 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 155 183 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_A00328 0a863328768c3c0f1054b66c32fd8501 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 242 262 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_B00288 c81c3764441c7fef90b4fddaa7a82a5c 61 Pfam PF11127 Protein of unknown function (DUF2892) 2 56 1.5E-14 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 vfu_B00300 d57eb479d789d9e20bf41f3c7089d60e 208 Gene3D G3DSA:3.40.30.10 24 207 2.0E-37 T 12-10-2018 vfu_B00300 d57eb479d789d9e20bf41f3c7089d60e 208 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 vfu_B00300 d57eb479d789d9e20bf41f3c7089d60e 208 Pfam PF13462 Thioredoxin 48 195 1.5E-6 T 12-10-2018 IPR012336 Thioredoxin-like fold vfu_B00300 d57eb479d789d9e20bf41f3c7089d60e 208 SUPERFAMILY SSF52833 47 205 1.32E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00048 2e70ca426ae5f4de0db1ff4d3e3923a8 278 Gene3D G3DSA:3.90.1140.10 87 271 2.5E-18 T 12-10-2018 vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 404 1.5E-78 T 12-10-2018 IPR008135 Competence-induced protein CinA vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 102.03 T 12-10-2018 IPR008135 Competence-induced protein CinA vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 Pfam PF00994 Probable molybdopterin binding domain 5 170 2.3E-31 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 Gene3D G3DSA:3.40.980.10 1 172 8.5E-49 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 SUPERFAMILY SSF53218 2 206 9.82E-37 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 PIRSF PIRSF006728 1 392 2.9E-113 T 12-10-2018 IPR008135 Competence-induced protein CinA vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 164 2.9E-26 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A01735 dd32389523f026110de3fe16fa8d13b2 413 SMART SM00852 5 172 1.1E-31 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A02030 c05e09d01b1878bf5e780e5985a1cf06 285 SUPERFAMILY SSF50182 105 171 5.23E-14 T 12-10-2018 IPR010920 LSM domain superfamily vfu_A02030 c05e09d01b1878bf5e780e5985a1cf06 285 Pfam PF00924 Mechanosensitive ion channel 63 259 3.3E-51 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_A02030 c05e09d01b1878bf5e780e5985a1cf06 285 Gene3D G3DSA:3.30.70.100 171 264 1.6E-23 T 12-10-2018 vfu_A02030 c05e09d01b1878bf5e780e5985a1cf06 285 SUPERFAMILY SSF82689 172 269 1.31E-26 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 vfu_A02030 c05e09d01b1878bf5e780e5985a1cf06 285 SUPERFAMILY SSF82861 21 104 2.88E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 vfu_A02030 c05e09d01b1878bf5e780e5985a1cf06 285 Gene3D G3DSA:2.30.30.60 121 170 1.8E-11 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily vfu_B00466 3b0531cfa66e52f02045028bb074fcc7 424 Pfam PF07690 Major Facilitator Superfamily 232 407 1.8E-12 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00466 3b0531cfa66e52f02045028bb074fcc7 424 Gene3D G3DSA:1.20.1250.20 217 409 4.8E-17 T 12-10-2018 vfu_B00466 3b0531cfa66e52f02045028bb074fcc7 424 TIGRFAM TIGR00897 2A0118: polyol permease 4 406 1.7E-183 T 12-10-2018 IPR004748 Polyol permease GO:0016021|GO:0022857|GO:0055085 vfu_B00466 3b0531cfa66e52f02045028bb074fcc7 424 Gene3D G3DSA:1.20.1250.20 7 205 6.1E-14 T 12-10-2018 vfu_B00466 3b0531cfa66e52f02045028bb074fcc7 424 SUPERFAMILY SSF103473 12 411 1.96E-42 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 SUPERFAMILY SSF47203 234 386 1.37E-48 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 2.1E-26 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 1.8E-44 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 Gene3D G3DSA:1.20.140.10 241 385 1.1E-48 T 12-10-2018 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 SUPERFAMILY SSF56645 6 249 9.03E-82 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 PIRSF PIRSF016578 137 387 1.3E-12 T 12-10-2018 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 PIRSF PIRSF016578 15 105 0.34 T 12-10-2018 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 Gene3D G3DSA:1.10.540.10 2 127 4.5E-40 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 124 3.7E-30 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 vfu_B01426 205517c6b8f44fc4e801f2eeeaf26bae 389 Gene3D G3DSA:2.40.110.10 128 240 1.2E-46 T 12-10-2018 vfu_B01158 448e491de73ecb938baf3bf9f70481fa 350 Pfam PF13343 Bacterial extracellular solute-binding protein 87 323 1.3E-35 T 12-10-2018 vfu_B01158 448e491de73ecb938baf3bf9f70481fa 350 SUPERFAMILY SSF53850 43 343 4.11E-47 T 12-10-2018 vfu_B01158 448e491de73ecb938baf3bf9f70481fa 350 Gene3D G3DSA:3.40.190.10 62 312 1.1E-37 T 12-10-2018 vfu_B01158 448e491de73ecb938baf3bf9f70481fa 350 Gene3D G3DSA:3.40.190.10 136 325 1.1E-37 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00532 3 448 3.6E-281 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:1.10.150.20 432 505 2.1E-29 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:3.40.50.10190 585 669 6.4E-27 T 12-10-2018 IPR036420 BRCT domain superfamily vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF14520 Helix-hairpin-helix domain 446 500 8.2E-6 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 664 4.8E-267 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Hamap MF_01588 DNA ligase [ligA]. 2 668 53.933 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00292 594 669 3.8E-10 T 12-10-2018 IPR001357 BRCT domain vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:1.10.287.610 1 68 3.9E-30 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 PIRSF PIRSF001604 1 669 1.0E-253 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF52113 592 668 5.23E-18 T 12-10-2018 IPR036420 BRCT domain superfamily vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF50249 318 399 3.43E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:2.20.70.80 391 431 1.9E-18 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF47781 404 584 6.3E-60 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:2.40.50.140 318 390 2.4E-35 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 668 7.6E-12 T 12-10-2018 IPR001357 BRCT domain vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:1.10.150.20 506 584 3.0E-29 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Gene3D G3DSA:3.30.470.90 69 317 1.5E-101 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 4.6E-135 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00278 446 465 100.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00278 480 499 0.27 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SMART SM00278 544 563 180.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 5.1E-36 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 SUPERFAMILY SSF56091 2 316 7.63E-125 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF12826 Helix-hairpin-helix motif 510 573 6.4E-23 T 12-10-2018 vfu_A02632 58d0a5c33590860e2aff944f52bbd63a 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.4E-9 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 70 434 6.5E-41 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 SUPERFAMILY SSF52954 438 545 3.78E-34 T 12-10-2018 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 546 37.383 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Pfam PF04073 Aminoacyl-tRNA editing domain 232 353 9.5E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 SUPERFAMILY SSF55826 193 365 2.62E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 PRINTS PR01046 Prolyl-tRNA synthetase signature 43 61 2.0E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 PRINTS PR01046 Prolyl-tRNA synthetase signature 109 117 2.0E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 PRINTS PR01046 Prolyl-tRNA synthetase signature 119 130 2.0E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 PRINTS PR01046 Prolyl-tRNA synthetase signature 79 90 2.0E-16 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Gene3D G3DSA:3.40.50.800 441 530 1.4E-221 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 SUPERFAMILY SSF55681 1 453 1.26E-93 T 12-10-2018 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Gene3D G3DSA:3.90.960.10 215 364 1.4E-221 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Gene3D G3DSA:3.30.930.10 1 440 1.4E-221 T 12-10-2018 vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 Pfam PF03129 Anticodon binding domain 450 543 1.2E-23 T 12-10-2018 IPR004154 Anticodon-binding vfu_A02707 d68cdacc16d1af79a1ebada20dee539b 546 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 543 8.4E-236 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.40.50.720 233 366 1.8E-37 T 12-10-2018 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.40.50.720 2 139 1.7E-52 T 12-10-2018 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02254 TrkA-N domain 3 115 4.1E-30 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02254 TrkA-N domain 235 350 1.5E-24 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF51735 232 376 1.05E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.30.70.1450 140 232 1.1E-21 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02080 TrkA-C domain 391 449 6.3E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF116726 375 437 7.06E-7 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF51735 1 151 8.9E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 SUPERFAMILY SSF116726 148 226 9.02E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 Gene3D G3DSA:3.30.70.1450 367 458 4.6E-28 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.7E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.7E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.7E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.7E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00275 c6291ac3a1728beddc1d8ed2225dd4b3 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.7E-34 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00910 0f77df436c8aa134b5a09049e9e31ae2 574 Gene3D G3DSA:2.60.40.10 1 93 2.2E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A00910 0f77df436c8aa134b5a09049e9e31ae2 574 SUPERFAMILY SSF81296 2 90 2.17E-11 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_A00910 0f77df436c8aa134b5a09049e9e31ae2 574 Gene3D G3DSA:1.50.10.10 94 573 2.0E-221 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 vfu_A00910 0f77df436c8aa134b5a09049e9e31ae2 574 Pfam PF00759 Glycosyl hydrolase family 9 100 500 1.3E-22 T 12-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 vfu_A00910 0f77df436c8aa134b5a09049e9e31ae2 574 Pfam PF02927 Cellulase N-terminal ig-like domain 4 84 2.8E-7 T 12-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 vfu_A00910 0f77df436c8aa134b5a09049e9e31ae2 574 SUPERFAMILY SSF48208 84 565 1.97E-87 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 5.0E-46 T 12-10-2018 IPR032090 Peptide chain release factor 3, C-terminal vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 159 3.6E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Gene3D G3DSA:3.40.50.300 72 379 1.6E-115 T 12-10-2018 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.8E-9 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 SUPERFAMILY SSF50447 262 393 8.25E-28 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 529 3.3E-303 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Gene3D G3DSA:3.30.70.3280 390 529 7.5E-52 T 12-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Gene3D G3DSA:3.40.50.300 110 275 1.6E-115 T 12-10-2018 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.029 T 12-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 SUPERFAMILY SSF52540 10 277 3.25E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 1.1E-45 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00956 e3b9711c6b88c7772f6a7e1aada9812c 529 SUPERFAMILY SSF54980 393 468 2.81E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A01425 660924adfeb8a9f65a25c194b0a19f18 513 Gene3D G3DSA:3.40.50.1820 252 511 4.7E-63 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01425 660924adfeb8a9f65a25c194b0a19f18 513 Pfam PF00756 Putative esterase 279 505 2.5E-28 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 vfu_A01425 660924adfeb8a9f65a25c194b0a19f18 513 SUPERFAMILY SSF81296 126 257 6.44E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_A01425 660924adfeb8a9f65a25c194b0a19f18 513 SUPERFAMILY SSF53474 263 506 8.53E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01425 660924adfeb8a9f65a25c194b0a19f18 513 Gene3D G3DSA:2.60.40.10 121 247 2.0E-7 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A01425 660924adfeb8a9f65a25c194b0a19f18 513 Pfam PF11806 Domain of unknown function (DUF3327) 153 259 9.4E-11 T 12-10-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 SUPERFAMILY SSF52540 273 650 4.35E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:2.30.30.930 55 114 1.2E-28 T 12-10-2018 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Pfam PF00271 Helicase conserved C-terminal domain 495 603 8.6E-15 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 SMART SM00490 519 603 5.1E-17 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:2.30.30.140 1 53 4.9E-24 T 12-10-2018 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:3.40.50.300 491 643 1.1E-25 T 12-10-2018 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:3.30.360.80 714 786 1.2E-30 T 12-10-2018 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Gene3D G3DSA:3.40.50.10810 150 449 5.3E-104 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 SMART SM00487 150 342 7.4E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.294 T 12-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 SUPERFAMILY SSF52540 115 375 1.2E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Pfam PF00176 SNF2 family N-terminal domain 174 345 1.1E-15 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 vfu_A00753 a1303f34cadeae141d0aa79ba57690c9 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 1.4E-149 T 12-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 vfu_A02331 5e04398b013d9e076fc4393c6298c776 387 Gene3D G3DSA:3.40.50.10490 201 373 3.1E-56 T 12-10-2018 vfu_A02331 5e04398b013d9e076fc4393c6298c776 387 Gene3D G3DSA:3.40.50.10490 4 197 2.3E-56 T 12-10-2018 vfu_A02331 5e04398b013d9e076fc4393c6298c776 387 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 17 379 8.5E-176 T 12-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 vfu_A02331 5e04398b013d9e076fc4393c6298c776 387 Pfam PF01380 SIS domain 59 191 1.1E-15 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A02331 5e04398b013d9e076fc4393c6298c776 387 SUPERFAMILY SSF53697 20 370 1.82E-50 T 12-10-2018 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 Gene3D G3DSA:1.10.287.80 6 284 2.0E-110 T 12-10-2018 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.547 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 Gene3D G3DSA:3.40.1380.10 61 207 2.0E-110 T 12-10-2018 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 Pfam PF00231 ATP synthase 5 287 1.3E-97 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 SUPERFAMILY SSF52943 2 288 9.81E-96 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00349 d455337ef61a1d845a48d5bacace5ef5 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 3.7E-111 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Pfam PF00136 DNA polymerase family B 377 737 1.8E-40 T 12-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:1.10.132.60 643 787 1.8E-58 T 12-10-2018 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 SUPERFAMILY SSF56672 385 780 6.67E-112 T 12-10-2018 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 SUPERFAMILY SSF53098 4 389 7.59E-86 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.90.1600.10 459 636 3.7E-57 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.90.1600.10 348 444 1.1E-29 T 12-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.30.420.10 156 347 5.6E-70 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 SMART SM00486 153 558 5.6E-66 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 12-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 192 296 7.8E-14 T 12-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:3.30.70.2250 41 108 1.3E-40 T 12-10-2018 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 Gene3D G3DSA:2.40.50.590 6 153 1.3E-40 T 12-10-2018 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02145 a8cfc74606964c69dfc27fcf9b90eb0d 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 12-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00776 52ba51bf6391f8486972ad71dd1156cb 293 Pfam PF08220 DeoR-like helix-turn-helix domain 10 51 1.1E-4 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A00776 52ba51bf6391f8486972ad71dd1156cb 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 10 52 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A00776 52ba51bf6391f8486972ad71dd1156cb 293 Pfam PF13280 WYL domain 123 287 2.3E-16 T 12-10-2018 IPR026881 WYL domain vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 SMART SM00388 248 314 7.1E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 SUPERFAMILY SSF47384 244 310 1.02E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 SUPERFAMILY SSF55874 309 458 5.24E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 310 7.3E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 SMART SM00387 353 460 1.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 Gene3D G3DSA:3.30.565.10 315 460 5.0E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 Gene3D G3DSA:1.10.287.130 241 313 3.8E-13 T 12-10-2018 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 4.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 4.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 4.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01342 c3f852a9208dfca524614d06d222d19c 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 8.2E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00394 141820735c0eef2a8077befb1dea3897 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 1.9E-128 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like vfu_A00394 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.7E-8 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 4.7E-8 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 4.7E-8 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:3.50.50.60 8 389 2.0E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00394 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:2.40.30.10 189 340 2.0E-129 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 SUPERFAMILY SSF51905 1 394 8.31E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00394 141820735c0eef2a8077befb1dea3897 395 Pfam PF03486 HI0933-like protein 6 393 1.1E-154 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-5 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 1.8E-5 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.8E-5 T 12-10-2018 vfu_A00394 141820735c0eef2a8077befb1dea3897 395 Gene3D G3DSA:1.10.8.260 263 323 2.0E-129 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily vfu_A00394 141820735c0eef2a8077befb1dea3897 395 SUPERFAMILY SSF160996 191 339 3.01E-44 T 12-10-2018 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 Gene3D G3DSA:3.40.140.10 180 295 1.7E-25 T 12-10-2018 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 Gene3D G3DSA:3.40.140.10 29 179 4.4E-43 T 12-10-2018 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 SUPERFAMILY SSF53927 152 284 7.15E-34 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 SUPERFAMILY SSF53927 1 147 2.84E-41 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 6.6E-41 T 12-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 57 144 1.9E-13 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.677 T 12-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 2.1E-98 T 12-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 vfu_A02124 fb1a220444425dd568cc94bc8edd5586 295 PIRSF PIRSF006334 14 295 5.6E-107 T 12-10-2018 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 267 7.9E-91 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 SUPERFAMILY SSF55920 4 268 1.07E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 Gene3D G3DSA:3.90.230.10 1 277 1.9E-105 T 12-10-2018 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.874 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01068 64fac3d4d0fc48273185153971f5f820 280 Pfam PF00557 Metallopeptidase family M24 12 259 7.0E-51 T 12-10-2018 IPR000994 Peptidase M24 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 142 1.1E-37 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 Pfam PF00700 Bacterial flagellin C-terminal helical region 190 274 2.8E-27 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 PRINTS PR00207 Flagellin signature 76 95 3.4E-18 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 PRINTS PR00207 Flagellin signature 37 54 3.4E-18 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 PRINTS PR00207 Flagellin signature 111 134 3.4E-18 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 Gene3D G3DSA:1.10.8.410 222 275 3.8E-19 T 12-10-2018 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 Gene3D G3DSA:1.20.58.1830 7 33 1.7E-54 T 12-10-2018 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 SUPERFAMILY SSF64518 1 275 1.44E-74 T 12-10-2018 vfu_A01392 0b39338fb1ede99b059563d8f10cc71b 275 Gene3D G3DSA:1.20.1330.10 45 176 1.7E-54 T 12-10-2018 vfu_B00766 bd1bae6bc2e8bad377a39f82be852d84 144 Pfam PF06127 Protein of unknown function (DUF962) 1 141 9.9E-19 T 12-10-2018 IPR009305 Protein of unknown function DUF962 vfu_A02293 f28f0bf48ec6c759577a9f6fff12e44c 312 Pfam PF04616 Glycosyl hydrolases family 43 6 306 3.3E-65 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 vfu_A02293 f28f0bf48ec6c759577a9f6fff12e44c 312 Gene3D G3DSA:2.115.10.20 1 312 1.3E-89 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_A02293 f28f0bf48ec6c759577a9f6fff12e44c 312 SUPERFAMILY SSF75005 6 310 4.83E-63 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_A02293 f28f0bf48ec6c759577a9f6fff12e44c 312 PIRSF PIRSF025414 1 312 1.9E-129 T 12-10-2018 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55 vfu_B00060 9f266254e5d266a280a8ec07452ee2ae 137 SUPERFAMILY SSF55729 13 124 5.77E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00060 9f266254e5d266a280a8ec07452ee2ae 137 Gene3D G3DSA:3.40.630.30 6 135 5.5E-21 T 12-10-2018 vfu_B00060 9f266254e5d266a280a8ec07452ee2ae 137 Pfam PF13673 Acetyltransferase (GNAT) domain 39 125 5.8E-12 T 12-10-2018 IPR000182 GNAT domain vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 SUPERFAMILY SSF53383 17 436 8.95E-101 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 952 25.609 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 Pfam PF02347 Glycine cleavage system P-protein 457 736 2.4E-9 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 Pfam PF02347 Glycine cleavage system P-protein 17 438 7.0E-177 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 Gene3D G3DSA:3.90.1150.10 760 895 1.9E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 SUPERFAMILY SSF53383 445 947 1.71E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 Gene3D G3DSA:3.40.640.10 95 353 1.4E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 Gene3D G3DSA:3.40.640.10 523 745 4.3E-58 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B01361 57d3d101867e3b83765c26d6680f45d7 954 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 946 0.0 T 12-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 Pfam PF13360 PQQ-like domain 53 236 3.6E-5 T 12-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 Gene3D G3DSA:2.130.10.10 20 244 4.6E-34 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 192 230 0.01 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 151 189 2.1E-6 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 236 274 0.58 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 285 323 78.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 SMART SM00320 56 106 350.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 12-10-2018 IPR019775 WD40 repeat, conserved site vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 SUPERFAMILY SSF50998 24 318 4.47E-46 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily vfu_A00009 483d4ee95856f438eb04c9644a5f27dd 326 Gene3D G3DSA:2.130.10.10 245 326 1.5E-8 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 SUPERFAMILY SSF51206 11 143 3.54E-14 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 SMART SM00116 232 279 3.6E-6 T 12-10-2018 IPR000644 CBS domain vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 SMART SM00116 165 215 0.0022 T 12-10-2018 IPR000644 CBS domain vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 Gene3D G3DSA:2.60.120.10 6 141 6.3E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 Pfam PF03445 Putative nucleotidyltransferase DUF294 306 438 1.9E-44 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 477 620 3.4E-45 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 Pfam PF00571 CBS domain 158 213 4.6E-6 T 12-10-2018 IPR000644 CBS domain vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 Pfam PF00571 CBS domain 227 275 3.7E-7 T 12-10-2018 IPR000644 CBS domain vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 Gene3D G3DSA:3.10.580.10 149 311 3.1E-27 T 12-10-2018 vfu_B01247 ca531c9c1e025c5b6e9fdeb726fdd48c 623 SUPERFAMILY SSF54631 157 276 7.07E-25 T 12-10-2018 vfu_A00798 f1a27c3df916d5baddaf59638bc9d2d8 134 SUPERFAMILY SSF54593 2 132 5.47E-30 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A00798 f1a27c3df916d5baddaf59638bc9d2d8 134 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 129 6.0E-9 T 12-10-2018 IPR028973 PhnB-like vfu_A00798 f1a27c3df916d5baddaf59638bc9d2d8 134 Gene3D G3DSA:3.10.180.10 8 133 2.5E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Gene3D G3DSA:3.30.420.140 87 208 1.6E-49 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SUPERFAMILY SSF50249 399 477 1.86E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SUPERFAMILY SSF47781 227 313 6.56E-28 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SMART SM00732 83 181 3.4E-38 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Gene3D G3DSA:1.10.150.310 256 387 7.5E-51 T 12-10-2018 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Pfam PF00575 S1 RNA binding domain 405 477 7.2E-22 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Pfam PF12836 Helix-hairpin-helix motif 248 312 2.5E-28 T 12-10-2018 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Pfam PF16921 Tex protein YqgF-like domain 84 208 2.0E-56 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SUPERFAMILY SSF53098 79 226 1.74E-52 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SUPERFAMILY SSF158832 6 78 4.97E-15 T 12-10-2018 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SMART SM00316 406 477 4.5E-25 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Gene3D G3DSA:2.40.50.140 388 482 7.2E-29 T 12-10-2018 vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 SUPERFAMILY SSF47781 317 389 6.67E-19 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A00528 2a3932f6cd9a980b135b0bed647c9062 526 Gene3D G3DSA:1.10.3500.10 1 86 1.2E-16 T 12-10-2018 IPR023323 Tex-like domain superfamily vfu_A02019 5ab3bef2f472dfaefa10b9f611c0881b 135 Gene3D G3DSA:1.10.760.10 3 130 9.1E-20 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A02019 5ab3bef2f472dfaefa10b9f611c0881b 135 Pfam PF00034 Cytochrome c 11 100 2.5E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A02019 5ab3bef2f472dfaefa10b9f611c0881b 135 SUPERFAMILY SSF46626 10 101 3.39E-15 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B01367 b5ecd48026eddb01f1a25f97f1ebe95a 414 SMART SM00267 253 412 1.6E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_B01367 b5ecd48026eddb01f1a25f97f1ebe95a 414 SUPERFAMILY SSF55073 269 409 4.71E-36 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01367 b5ecd48026eddb01f1a25f97f1ebe95a 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 408 2.8E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B01367 b5ecd48026eddb01f1a25f97f1ebe95a 414 Gene3D G3DSA:3.30.70.270 251 410 1.7E-43 T 12-10-2018 vfu_B01367 b5ecd48026eddb01f1a25f97f1ebe95a 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 410 2.0E-39 T 12-10-2018 IPR000160 GGDEF domain vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 SUPERFAMILY SSF141868 1 173 3.01E-23 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 PIRSF PIRSF003180 1 385 5.1E-154 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 Pfam PF00563 EAL domain 54 172 1.9E-12 T 12-10-2018 IPR001633 EAL domain vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 SUPERFAMILY SSF109604 163 381 1.29E-42 T 12-10-2018 vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 Gene3D G3DSA:1.10.3210.10 176 350 2.4E-21 T 12-10-2018 vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 Gene3D G3DSA:3.20.20.450 26 175 7.9E-15 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02357 a249f31eb6e19408227fc549ae31245b 386 Pfam PF08668 HDOD domain 187 301 2.4E-14 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD vfu_A03020 b198233fa6efabf8523aa382f45e63fb 168 SUPERFAMILY SSF54631 22 144 5.54E-18 T 12-10-2018 vfu_A03020 b198233fa6efabf8523aa382f45e63fb 168 Gene3D G3DSA:3.10.580.10 22 145 1.3E-16 T 12-10-2018 vfu_A02210 67ae346e6e50915db9327bfc78226d08 299 Pfam PF00294 pfkB family carbohydrate kinase 9 293 3.1E-44 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_A02210 67ae346e6e50915db9327bfc78226d08 299 SUPERFAMILY SSF53613 8 289 3.12E-59 T 12-10-2018 IPR029056 Ribokinase-like vfu_A02210 67ae346e6e50915db9327bfc78226d08 299 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_A02210 67ae346e6e50915db9327bfc78226d08 299 Gene3D G3DSA:3.40.1190.20 1 297 4.1E-61 T 12-10-2018 IPR029056 Ribokinase-like vfu_B01310 d4b9b7fb0c7909f0e581d5364f8fbd84 235 Pfam PF06961 Protein of unknown function (DUF1294) 141 186 2.5E-11 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 vfu_B01310 d4b9b7fb0c7909f0e581d5364f8fbd84 235 Gene3D G3DSA:2.40.50.140 35 104 2.6E-7 T 12-10-2018 vfu_B01310 d4b9b7fb0c7909f0e581d5364f8fbd84 235 SUPERFAMILY SSF50249 34 100 2.74E-5 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 Gene3D G3DSA:1.10.10.10 3 89 2.8E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 SUPERFAMILY SSF46785 8 88 1.2E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 Gene3D G3DSA:3.40.190.10 164 261 7.9E-40 T 12-10-2018 vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 Pfam PF03466 LysR substrate binding domain 88 289 3.4E-26 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 5.9E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 Gene3D G3DSA:3.40.190.10 92 287 7.9E-40 T 12-10-2018 vfu_B01082 6f5393c18e33e415a912ec0c1e020821 298 SUPERFAMILY SSF53850 89 291 1.81E-29 T 12-10-2018 vfu_A00887 47323ea566a7675443ed6ef26979544d 305 Gene3D G3DSA:3.40.50.300 1 235 2.0E-66 T 12-10-2018 vfu_A00887 47323ea566a7675443ed6ef26979544d 305 SMART SM00382 29 212 8.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00887 47323ea566a7675443ed6ef26979544d 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00887 47323ea566a7675443ed6ef26979544d 305 SUPERFAMILY SSF52540 3 233 4.89E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00887 47323ea566a7675443ed6ef26979544d 305 Pfam PF00005 ABC transporter 20 164 3.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 SMART SM00448 2 111 7.6E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 SMART SM00862 148 224 4.1E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 Pfam PF00072 Response regulator receiver domain 4 112 4.1E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 Gene3D G3DSA:1.10.10.10 127 228 2.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00573 3bd2be192d99c02db465748cd3954704 228 SUPERFAMILY SSF46894 124 225 5.67E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 Gene3D G3DSA:3.40.50.2300 1 126 1.2E-36 T 12-10-2018 vfu_A00573 3bd2be192d99c02db465748cd3954704 228 SUPERFAMILY SSF52172 1 123 8.97E-38 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A03054 2b81edbc33d37e89f19d1cbbd673bee1 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 19.303 T 12-10-2018 IPR003746 Protein of unknown function DUF167 vfu_A03054 2b81edbc33d37e89f19d1cbbd673bee1 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.4E-25 T 12-10-2018 IPR005228 Conserved hypothetical protein CHP00251 vfu_A03054 2b81edbc33d37e89f19d1cbbd673bee1 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 3.6E-24 T 12-10-2018 IPR003746 Protein of unknown function DUF167 vfu_A03054 2b81edbc33d37e89f19d1cbbd673bee1 96 SUPERFAMILY SSF69786 4 95 6.8E-31 T 12-10-2018 IPR036591 YggU-like superfamily vfu_A03054 2b81edbc33d37e89f19d1cbbd673bee1 96 Gene3D G3DSA:3.30.1200.10 1 96 1.2E-33 T 12-10-2018 IPR036591 YggU-like superfamily vfu_A03054 2b81edbc33d37e89f19d1cbbd673bee1 96 SMART SM01152 7 83 4.7E-37 T 12-10-2018 IPR003746 Protein of unknown function DUF167 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.5E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.5E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.5E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 SUPERFAMILY SSF47729 1 90 5.3E-33 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A00085 fd5d3bc8100a8616b192cb5f472e4640 90 SMART SM00411 1 90 6.0E-45 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A00079 e7935b01c0b10b9d0cf64703d5457424 297 Pfam PF00480 ROK family 3 295 9.7E-72 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A00079 e7935b01c0b10b9d0cf64703d5457424 297 Gene3D G3DSA:3.30.420.40 118 286 7.7E-81 T 12-10-2018 vfu_A00079 e7935b01c0b10b9d0cf64703d5457424 297 ProSitePatterns PS01125 ROK family signature. 129 156 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A00079 e7935b01c0b10b9d0cf64703d5457424 297 Gene3D G3DSA:3.30.420.40 4 293 7.7E-81 T 12-10-2018 vfu_A00079 e7935b01c0b10b9d0cf64703d5457424 297 SUPERFAMILY SSF53067 2 296 1.5E-57 T 12-10-2018 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 SUPERFAMILY SSF52335 7 197 6.54E-72 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 Gene3D G3DSA:3.40.50.1380 4 197 1.2E-86 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 SMART SM00798 137 462 3.1E-217 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 PIRSF PIRSF000414 1 530 1.1E-227 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 SMART SM00851 19 132 7.0E-61 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 Pfam PF02142 MGS-like domain 19 132 1.2E-29 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 1.8E-118 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 Gene3D G3DSA:3.40.140.20 220 375 3.6E-57 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 Gene3D G3DSA:3.40.140.20 394 530 3.6E-60 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 SUPERFAMILY SSF53927 222 530 5.01E-130 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.685 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00082 f1e837b4cd6f797cd901890ba9650e49 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 530 2.1E-259 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 1.3E-77 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:1.10.274.100 490 640 2.6E-39 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:2.40.50.100 948 1021 1.7E-24 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 3.8E-19 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:1.10.150.390 1315 1376 1.2E-28 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.969 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 2.5E-87 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:2.40.50.100 1151 1214 2.7E-63 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:1.10.132.30 641 790 1.0E-65 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:2.40.50.100 1022 1126 1.6E-30 T 12-10-2018 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 SMART SM00663 235 514 1.1E-184 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 9.6E-28 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00037 7993d4dff2efbe6f50ba95a42bcbdd29 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 2.7E-63 T 12-10-2018 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 Gene3D G3DSA:1.10.10.10 2 70 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 Gene3D G3DSA:3.40.1410.10 71 229 3.9E-35 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 SMART SM00345 6 65 8.0E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 2.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 2.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 SUPERFAMILY SSF64288 53 229 4.08E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 7.7E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 SMART SM00866 86 225 3.2E-32 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 230 1.0E-110 T 12-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 Pfam PF07702 UTRA domain 86 224 4.3E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_B00120 e3010233b3c7ad97a7b0d0cb9773de79 234 SUPERFAMILY SSF46785 3 69 2.04E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00400 7abd2b485aad28fe071374955b492145 504 SUPERFAMILY SSF52540 8 226 2.93E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00400 7abd2b485aad28fe071374955b492145 504 SUPERFAMILY SSF52540 273 490 9.37E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00400 7abd2b485aad28fe071374955b492145 504 Gene3D G3DSA:3.40.50.300 1 247 6.4E-60 T 12-10-2018 vfu_A00400 7abd2b485aad28fe071374955b492145 504 Pfam PF00005 ABC transporter 23 172 3.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00400 7abd2b485aad28fe071374955b492145 504 Pfam PF00005 ABC transporter 274 427 1.3E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00400 7abd2b485aad28fe071374955b492145 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00400 7abd2b485aad28fe071374955b492145 504 Gene3D G3DSA:3.40.50.300 268 503 1.9E-39 T 12-10-2018 vfu_A00400 7abd2b485aad28fe071374955b492145 504 SMART SM00382 281 476 1.8E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00400 7abd2b485aad28fe071374955b492145 504 SMART SM00382 32 220 8.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01706 a11e305949b9e5ecf788a09ede276c5b 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 3.0E-45 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 vfu_A01706 a11e305949b9e5ecf788a09ede276c5b 92 SUPERFAMILY SSF50715 1 92 1.66E-27 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A01706 a11e305949b9e5ecf788a09ede276c5b 92 Gene3D G3DSA:2.40.240.10 1 92 3.4E-34 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A01706 a11e305949b9e5ecf788a09ede276c5b 92 Pfam PF01386 Ribosomal L25p family 4 89 1.2E-22 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 vfu_A01706 a11e305949b9e5ecf788a09ede276c5b 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.103 T 12-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 vfu_B00083 995ae262524cc464b6de06ea6d842bbe 182 Pfam PF00857 Isochorismatase family 5 152 1.6E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 vfu_B00083 995ae262524cc464b6de06ea6d842bbe 182 Gene3D G3DSA:3.40.50.850 1 164 1.7E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_B00083 995ae262524cc464b6de06ea6d842bbe 182 SUPERFAMILY SSF52499 2 161 7.33E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_A01771 9b023071dda1cfd2c2ab0543defd1f1d 121 SUPERFAMILY SSF55620 1 118 1.33E-40 T 12-10-2018 vfu_A01771 9b023071dda1cfd2c2ab0543defd1f1d 121 Gene3D G3DSA:3.30.479.10 1 120 3.2E-49 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 vfu_A01771 9b023071dda1cfd2c2ab0543defd1f1d 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 4 119 2.4E-34 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 vfu_A01771 9b023071dda1cfd2c2ab0543defd1f1d 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 1.5E-32 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 vfu_A01771 9b023071dda1cfd2c2ab0543defd1f1d 121 PIRSF PIRSF006113 1 120 2.4E-53 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 vfu_A00695 892dae1d364999aa39ba6e63780fcf0b 192 Pfam PF08525 Opacity-associated protein A N-terminal motif 40 66 5.6E-8 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal vfu_A00695 892dae1d364999aa39ba6e63780fcf0b 192 Pfam PF04225 Opacity-associated protein A LysM-like domain 109 192 1.1E-37 T 12-10-2018 IPR007340 Opacity-associated protein A vfu_A00695 892dae1d364999aa39ba6e63780fcf0b 192 Gene3D G3DSA:3.10.450.350 96 190 1.2E-13 T 12-10-2018 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 3.4E-12 T 12-10-2018 IPR004176 Clp, N-terminal vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.3E-13 T 12-10-2018 IPR004176 Clp, N-terminal vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.9E-27 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 SMART SM00382 198 343 9.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 SMART SM00382 597 768 2.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 SUPERFAMILY SSF81923 4 156 4.22E-41 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 1.8E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 SUPERFAMILY SSF52540 546 851 1.23E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:3.40.50.300 550 764 1.4E-89 T 12-10-2018 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:1.10.1780.10 1 148 3.5E-31 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:3.40.50.300 348 544 5.2E-66 T 12-10-2018 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:1.10.8.60 766 857 5.4E-27 T 12-10-2018 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Gene3D G3DSA:3.40.50.300 158 347 5.6E-75 T 12-10-2018 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 12-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 335 2.8E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 SMART SM01086 766 855 4.1E-38 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 vfu_A01009 3b0e0acf642c1c17ebf6c57402664666 857 SUPERFAMILY SSF52540 159 545 1.62E-100 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 Gene3D G3DSA:1.10.760.10 145 320 7.8E-73 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 115 323 1.0E-56 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 Gene3D G3DSA:1.10.760.10 211 297 7.8E-73 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 7.4E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 2.7E-14 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 SUPERFAMILY SSF46626 241 322 1.16E-21 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 Gene3D G3DSA:1.20.58.1490 1 93 1.2E-33 T 12-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.5E-22 T 12-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.4E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.4E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 PIRSF PIRSF000006 1 324 1.9E-105 T 12-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III vfu_A01905 ae5f19e015f1136868f49f6552f0957e 325 SUPERFAMILY SSF46626 55 239 5.01E-30 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 SUPERFAMILY SSF51905 7 384 1.82E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.8E-10 T 12-10-2018 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 1.8E-10 T 12-10-2018 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.8E-10 T 12-10-2018 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.8E-10 T 12-10-2018 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 8 390 1.1E-149 T 12-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 Gene3D G3DSA:3.30.9.50 84 273 4.9E-95 T 12-10-2018 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 Pfam PF01494 FAD binding domain 7 321 1.3E-24 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 Gene3D G3DSA:3.50.50.60 8 338 4.9E-95 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00821 815ae6f87ae099e1be339311c71ca70c 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 389 2.5E-122 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 Pfam PF00108 Thiolase, N-terminal domain 4 263 7.9E-95 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 PIRSF PIRSF000429 1 401 1.7E-124 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 8.9E-143 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 Pfam PF02803 Thiolase, C-terminal domain 271 399 1.4E-44 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 SUPERFAMILY SSF53901 4 269 4.72E-78 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 Gene3D G3DSA:3.40.47.10 126 398 3.5E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 SUPERFAMILY SSF53901 271 399 6.91E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00320 abc83dfb47d7ba828429518c2e789ab0 401 Gene3D G3DSA:3.40.47.10 6 276 3.5E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 Gene3D G3DSA:3.30.70.420 146 261 3.8E-109 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 69 419 4.5E-111 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 SUPERFAMILY SSF55035 146 261 2.09E-35 T 12-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 SUPERFAMILY SSF56542 19 409 7.32E-78 T 12-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 Gene3D G3DSA:3.90.770.10 92 405 3.8E-109 T 12-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 12-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 292 318 4.9E-36 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 4.9E-36 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 4.9E-36 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 4.9E-36 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 4.9E-36 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B00350 1da1b96b4739e4ecaadce140ac3ce532 420 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 4.9E-36 T 12-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 vfu_B01340 30f6faf8a456537d282a577d156748b5 412 SMART SM00490 250 331 2.1E-29 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B01340 30f6faf8a456537d282a577d156748b5 412 Gene3D G3DSA:3.40.50.300 1 197 2.0E-65 T 12-10-2018 vfu_B01340 30f6faf8a456537d282a577d156748b5 412 SMART SM00487 19 214 2.5E-47 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_B01340 30f6faf8a456537d282a577d156748b5 412 Pfam PF00271 Helicase conserved C-terminal domain 223 331 7.9E-26 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B01340 30f6faf8a456537d282a577d156748b5 412 Pfam PF00270 DEAD/DEAH box helicase 24 186 4.1E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_B01340 30f6faf8a456537d282a577d156748b5 412 Gene3D G3DSA:3.40.50.300 198 363 8.9E-45 T 12-10-2018 vfu_B01340 30f6faf8a456537d282a577d156748b5 412 SUPERFAMILY SSF52540 68 351 2.04E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01340 30f6faf8a456537d282a577d156748b5 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 145 153 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_B00846 0a76dd7295f64be5b4b20bcac91d48f7 298 Pfam PF03466 LysR substrate binding domain 88 286 1.8E-35 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00846 0a76dd7295f64be5b4b20bcac91d48f7 298 Gene3D G3DSA:1.10.10.10 3 90 4.2E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00846 0a76dd7295f64be5b4b20bcac91d48f7 298 SUPERFAMILY SSF46785 4 88 1.1E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00846 0a76dd7295f64be5b4b20bcac91d48f7 298 Gene3D G3DSA:3.40.190.290 91 290 8.8E-57 T 12-10-2018 vfu_B00846 0a76dd7295f64be5b4b20bcac91d48f7 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00846 0a76dd7295f64be5b4b20bcac91d48f7 298 SUPERFAMILY SSF53850 89 294 8.87E-40 T 12-10-2018 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 Pfam PF03949 Malic enzyme, NAD binding domain 174 366 1.0E-24 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 Gene3D G3DSA:3.40.50.720 170 424 1.5E-81 T 12-10-2018 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 Pfam PF00390 Malic enzyme, N-terminal domain 29 123 2.6E-20 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 PIRSF PIRSF000106 52 424 1.4E-70 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 SUPERFAMILY SSF51735 172 417 2.8E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 SMART SM01274 27 160 3.5E-73 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 SMART SM00919 172 408 2.1E-134 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 SUPERFAMILY SSF53223 19 170 1.51E-51 T 12-10-2018 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 Gene3D G3DSA:3.40.50.10380 5 169 3.6E-65 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 vfu_A00584 96780d4133f7c371dbe6e103c5e320ab 424 ProSitePatterns PS00331 Malic enzymes signature. 168 184 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 Gene3D G3DSA:3.20.20.450 519 771 2.5E-75 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 SUPERFAMILY SSF55073 344 509 1.26E-38 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 SMART SM00267 328 507 7.9E-48 T 12-10-2018 IPR000160 GGDEF domain vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 5.2E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 Pfam PF00563 EAL domain 531 755 2.4E-65 T 12-10-2018 IPR001633 EAL domain vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 503 8.2E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 Gene3D G3DSA:3.30.70.270 337 518 1.1E-48 T 12-10-2018 vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 SUPERFAMILY SSF141868 523 767 9.94E-69 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 Gene3D G3DSA:1.20.1480.50 249 336 3.3E-6 T 12-10-2018 vfu_A01001 028708eaf0d0e23a22b2076e46c0d10e 782 SMART SM00052 517 760 1.6E-71 T 12-10-2018 IPR001633 EAL domain vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 SUPERFAMILY SSF51261 145 390 2.04E-69 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 134 7.3E-5 T 12-10-2018 IPR007340 Opacity-associated protein A vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 Gene3D G3DSA:3.10.450.350 173 408 1.2E-79 T 12-10-2018 vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 1.1E-5 T 12-10-2018 IPR013731 Opacity-associated protein A, N-terminal vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 Gene3D G3DSA:2.70.70.10 266 395 1.2E-79 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 Pfam PF01551 Peptidase family M23 295 389 2.8E-30 T 12-10-2018 IPR016047 Peptidase M23 vfu_A00924 d199578f58d93a11f1bd264f61f5ba97 430 Gene3D G3DSA:3.10.450.350 70 161 4.7E-10 T 12-10-2018 vfu_B00904 67411aa4e9aff4dc3ee3847d89f609ec 196 Gene3D G3DSA:1.10.357.10 72 196 5.7E-22 T 12-10-2018 vfu_B00904 67411aa4e9aff4dc3ee3847d89f609ec 196 Gene3D G3DSA:1.10.10.60 1 69 5.0E-24 T 12-10-2018 vfu_B00904 67411aa4e9aff4dc3ee3847d89f609ec 196 SUPERFAMILY SSF48498 84 196 9.16E-19 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B00904 67411aa4e9aff4dc3ee3847d89f609ec 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 2.4E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00904 67411aa4e9aff4dc3ee3847d89f609ec 196 SUPERFAMILY SSF46689 2 76 3.44E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02798 9509ad2bde3c88c53105bae9e167675c 620 Gene3D G3DSA:1.10.287.950 288 619 2.6E-70 T 12-10-2018 vfu_A02798 9509ad2bde3c88c53105bae9e167675c 620 SUPERFAMILY SSF58104 309 618 1.57E-70 T 12-10-2018 vfu_A02798 9509ad2bde3c88c53105bae9e167675c 620 SMART SM01358 25 260 9.0E-4 T 12-10-2018 IPR032255 Helical bimodular sensor domain vfu_A02798 9509ad2bde3c88c53105bae9e167675c 620 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 405 583 3.1E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02798 9509ad2bde3c88c53105bae9e167675c 620 SMART SM00304 289 341 2.1E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02798 9509ad2bde3c88c53105bae9e167675c 620 SMART SM00283 356 617 5.1E-62 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 Pfam PF02355 Protein export membrane protein 429 598 5.4E-17 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 347 589 1.4E-73 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 133 597 2.5E-129 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 Pfam PF13721 SecD export protein N-terminal TM region 13 108 7.6E-23 T 12-10-2018 IPR027398 SecD export protein N-terminal TM domain vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 SUPERFAMILY SSF82866 406 603 1.44E-41 T 12-10-2018 vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 Gene3D G3DSA:3.30.1360.200 287 427 3.6E-45 T 12-10-2018 vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 Pfam PF07549 SecD/SecF GG Motif 128 150 2.0E-4 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 14 611 41.666 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 vfu_B00324 c5799ce9096ccae87e57f52a197b50bb 611 Gene3D G3DSA:3.30.70.3400 233 433 3.6E-45 T 12-10-2018 vfu_B00918 603259d28e9da70013660c1589a21b9e 302 Gene3D G3DSA:1.10.10.10 4 88 1.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00918 603259d28e9da70013660c1589a21b9e 302 Pfam PF03466 LysR substrate binding domain 88 290 3.0E-44 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00918 603259d28e9da70013660c1589a21b9e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00918 603259d28e9da70013660c1589a21b9e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00918 603259d28e9da70013660c1589a21b9e 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00918 603259d28e9da70013660c1589a21b9e 302 Gene3D G3DSA:3.40.190.290 90 291 3.6E-60 T 12-10-2018 vfu_B00918 603259d28e9da70013660c1589a21b9e 302 SUPERFAMILY SSF46785 6 82 7.69E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00918 603259d28e9da70013660c1589a21b9e 302 SUPERFAMILY SSF53850 89 294 2.17E-43 T 12-10-2018 vfu_B00918 603259d28e9da70013660c1589a21b9e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 9.5E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 1.4E-80 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 Pfam PF01726 LexA DNA binding domain 1 65 8.9E-30 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 Gene3D G3DSA:1.10.10.10 1 69 3.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 Gene3D G3DSA:2.10.109.10 86 208 7.7E-44 T 12-10-2018 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 Hamap MF_00015 LexA repressor [lexA]. 3 205 31.96 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 2.5E-12 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 2.5E-12 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 2.5E-12 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 SUPERFAMILY SSF51306 82 204 1.92E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 SUPERFAMILY SSF46785 3 69 1.33E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00479 8126ea3a4fe0f489370e65a3942818bc 208 Pfam PF00717 Peptidase S24-like 120 185 3.8E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.40.50.670 399 572 2.4E-75 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF55874 4 212 1.31E-74 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 SMART SM00433 35 798 1.0E-272 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF01751 Toprim domain 420 532 1.1E-18 T 12-10-2018 IPR006171 TOPRIM domain vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 3.8E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 805 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.10.20.690 593 684 7.5E-35 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF56719 395 796 2.88E-88 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 SUPERFAMILY SSF54211 221 393 3.03E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.30.565.10 1 220 9.6E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 SMART SM00387 31 175 3.4E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF00204 DNA gyrase B 221 391 1.1E-59 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 9.4E-31 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 805 108.305 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.40.50.670 701 804 9.1E-27 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 243 261 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 1.9E-87 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 Gene3D G3DSA:3.30.230.10 221 393 7.1E-74 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 35 50 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 113 127 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 70 83 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 4.8E-71 T 12-10-2018 vfu_A00310 e8e6000388dc27bd8bd6d135743338c6 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 4.8E-71 T 12-10-2018 vfu_A02058 17143072f87484ae3b3dc64869266269 192 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.6E-13 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A02058 17143072f87484ae3b3dc64869266269 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02058 17143072f87484ae3b3dc64869266269 192 Gene3D G3DSA:3.30.70.3270 18 146 9.2E-25 T 12-10-2018 vfu_A02058 17143072f87484ae3b3dc64869266269 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02058 17143072f87484ae3b3dc64869266269 192 SUPERFAMILY SSF54862 18 118 1.13E-22 T 12-10-2018 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Gene3D G3DSA:2.30.130.10 281 383 2.1E-33 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Pfam PF00696 Amino acid kinase family 21 249 2.5E-42 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 ProSitePatterns PS00902 Glutamate 5-kinase signature. 222 239 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Gene3D G3DSA:3.40.1160.10 12 280 7.8E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Hamap MF_00456 Glutamate 5-kinase [proB]. 20 274 35.882 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.9E-54 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 224 244 1.9E-54 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 163 190 1.9E-54 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 91 119 1.9E-54 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PRINTS PR00474 Glutamate 5-kinase family signature 131 152 1.9E-54 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 SUPERFAMILY SSF88697 292 382 8.84E-25 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 SMART SM00359 292 375 7.3E-23 T 12-10-2018 IPR002478 PUA domain GO:0003723 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 PIRSF PIRSF000729 16 384 7.6E-139 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 SUPERFAMILY SSF53633 21 271 2.09E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 Pfam PF01472 PUA domain 292 364 6.3E-26 T 12-10-2018 IPR002478 PUA domain GO:0003723 vfu_A01056 fad7ad7a97bb9ccf28c70afe53a8ffdb 385 TIGRFAM TIGR01027 proB: glutamate 5-kinase 20 382 3.1E-149 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Gene3D G3DSA:3.10.50.10 466 551 2.3E-170 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Pfam PF00704 Glycosyl hydrolases family 18 161 575 2.0E-87 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SMART SM00495 793 838 2.8E-9 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SMART SM00636 159 575 2.7E-157 T 12-10-2018 IPR011583 Chitinase II GO:0008061 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Gene3D G3DSA:2.10.10.20 793 836 1.3E-15 T 12-10-2018 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Gene3D G3DSA:2.60.40.10 692 782 5.0E-12 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Gene3D G3DSA:3.20.20.80 162 577 2.3E-170 T 12-10-2018 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Pfam PF08329 Chitinase A, N-terminal domain 21 156 8.5E-53 T 12-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Gene3D G3DSA:2.60.40.10 22 132 6.1E-43 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SMART SM00089 51 134 3.3E-4 T 12-10-2018 IPR022409 PKD/Chitinase domain vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SMART SM00089 600 690 1.4E-9 T 12-10-2018 IPR022409 PKD/Chitinase domain vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SMART SM00089 699 785 0.0019 T 12-10-2018 IPR022409 PKD/Chitinase domain vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SUPERFAMILY SSF81296 21 133 1.39E-31 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SUPERFAMILY SSF49299 596 689 5.36E-11 T 12-10-2018 IPR035986 PKD domain superfamily vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Gene3D G3DSA:2.60.40.10 597 691 3.5E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SUPERFAMILY SSF54556 461 546 2.83E-16 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SUPERFAMILY SSF51055 790 841 1.26E-13 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 Pfam PF02010 REJ domain 613 739 1.3E-7 T 12-10-2018 IPR002859 PKD/REJ-like domain vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 SUPERFAMILY SSF51445 152 579 4.11E-88 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B01027 2b2a7159655d1b9da00080e4bfcf0eee 846 ProSitePatterns PS01095 Chitinases family 18 active site. 307 315 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:1.10.287.130 392 452 5.5E-17 T 12-10-2018 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 SUPERFAMILY SSF47384 379 451 1.82E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 SMART SM00387 497 610 6.6E-14 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 607 5.1E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:3.30.565.10 454 609 5.4E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:3.40.190.10 136 256 3.5E-14 T 12-10-2018 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 54 292 1.2E-32 T 12-10-2018 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 SMART SM00388 386 455 2.6E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 558 7.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 607 7.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 588 7.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Gene3D G3DSA:3.40.190.10 51 281 3.5E-14 T 12-10-2018 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 SUPERFAMILY SSF53850 65 291 9.62E-17 T 12-10-2018 vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 SUPERFAMILY SSF55874 444 608 1.31E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01446 268d20524608133b44eec5efa2b71cbb 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 388 451 3.4E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01659 3b180e4bf107f5f292a3d9a9faf1b53b 540 Gene3D G3DSA:3.90.76.10 44 216 8.6E-139 T 12-10-2018 vfu_A01659 3b180e4bf107f5f292a3d9a9faf1b53b 540 Gene3D G3DSA:3.40.190.10 217 526 8.6E-139 T 12-10-2018 vfu_A01659 3b180e4bf107f5f292a3d9a9faf1b53b 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 1.6E-79 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_A01659 3b180e4bf107f5f292a3d9a9faf1b53b 540 PIRSF PIRSF002741 1 540 5.5E-85 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 vfu_A01659 3b180e4bf107f5f292a3d9a9faf1b53b 540 SUPERFAMILY SSF53850 34 534 2.9E-124 T 12-10-2018 vfu_A01659 3b180e4bf107f5f292a3d9a9faf1b53b 540 Gene3D G3DSA:3.10.105.10 296 514 8.6E-139 T 12-10-2018 vfu_A02684 4f09877806c99780b7b5fe3208d03a1f 174 Gene3D G3DSA:3.40.50.450 1 172 4.8E-68 T 12-10-2018 vfu_A02684 4f09877806c99780b7b5fe3208d03a1f 174 Pfam PF11892 Domain of unknown function (DUF3412) 52 173 4.9E-59 T 12-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 vfu_A02684 4f09877806c99780b7b5fe3208d03a1f 174 Pfam PF03641 Possible lysine decarboxylase 1 48 2.7E-5 T 12-10-2018 IPR031100 LOG family vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 SUPERFAMILY SSF69279 8 190 1.19E-48 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 SUPERFAMILY SSF69279 196 370 2.38E-44 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 508 4.2E-132 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 Gene3D G3DSA:3.30.1920.30 228 291 1.8E-85 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 Pfam PF05954 Phage late control gene D protein (GPD) 37 334 2.3E-76 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 Gene3D G3DSA:2.40.50.230 360 461 1.6E-40 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 SUPERFAMILY SSF69255 369 456 7.59E-33 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 Gene3D G3DSA:3.55.50.10 104 195 1.8E-85 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 10 526 6.6E-184 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 SUPERFAMILY SSF69349 447 628 1.57E-46 T 12-10-2018 vfu_B01011 c274ca72954df91b18b98200d4beebf5 698 Gene3D G3DSA:2.30.110.50 13 336 1.8E-85 T 12-10-2018 vfu_B01300 485d88ed8a57fec700670c16d44eb9d7 1073 Pfam PF05359 Domain of Unknown Function (DUF748) 167 332 5.4E-18 T 12-10-2018 IPR008023 Protein of unknown function DUF748 vfu_B01300 485d88ed8a57fec700670c16d44eb9d7 1073 Pfam PF05359 Domain of Unknown Function (DUF748) 437 594 2.2E-23 T 12-10-2018 IPR008023 Protein of unknown function DUF748 vfu_B01300 485d88ed8a57fec700670c16d44eb9d7 1073 Pfam PF05359 Domain of Unknown Function (DUF748) 668 813 2.0E-35 T 12-10-2018 IPR008023 Protein of unknown function DUF748 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Gene3D G3DSA:2.160.10.10 1 196 7.8E-50 T 12-10-2018 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 SUPERFAMILY SSF51161 1 262 4.26E-75 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 41.892 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 1.3E-93 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Gene3D G3DSA:1.20.1180.10 197 262 1.1E-22 T 12-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 PIRSF PIRSF000456 4 262 2.8E-95 T 12-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 2.1E-26 T 12-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 6.6E-7 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 35 69 2.1E-4 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A01081 53a06e5c348cdea0648e78a90fe2e12a 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 3.5E-6 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_B00584 ea22417a7bdbc8edbfbdc632570a33f1 294 Gene3D G3DSA:3.20.20.330 1 293 2.3E-66 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 vfu_B00584 ea22417a7bdbc8edbfbdc632570a33f1 294 SUPERFAMILY SSF82282 1 291 1.44E-72 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 vfu_B00584 ea22417a7bdbc8edbfbdc632570a33f1 294 Pfam PF02574 Homocysteine S-methyltransferase 1 288 9.2E-53 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 vfu_B00584 ea22417a7bdbc8edbfbdc632570a33f1 294 PIRSF PIRSF037505 3 293 1.1E-12 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 vfu_A01426 b7898b8ffed6b67e0b018857cc1d4214 286 SUPERFAMILY SSF53474 8 279 7.3E-22 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01426 b7898b8ffed6b67e0b018857cc1d4214 286 Gene3D G3DSA:3.40.50.1820 2 282 1.6E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01426 b7898b8ffed6b67e0b018857cc1d4214 286 Pfam PF12146 Serine aminopeptidase, S33 40 150 1.5E-9 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 vfu_A01426 b7898b8ffed6b67e0b018857cc1d4214 286 PIRSF PIRSF037442 1 283 9.1E-83 T 12-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 vfu_A01584 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 36.051 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD vfu_A01584 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 SUPERFAMILY SSF101322 2 204 1.44E-80 T 12-10-2018 IPR035932 HflD-like superfamily vfu_A01584 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 5.1E-77 T 12-10-2018 IPR007451 High frequency lysogenization protein HflD vfu_A01584 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-98 T 12-10-2018 vfu_A01584 ed89f25cfdb6353b4b8fdc89dc71a9cc 205 Gene3D G3DSA:1.10.3890.10 1 205 5.5E-77 T 12-10-2018 IPR035932 HflD-like superfamily vfu_B00367 be09c157d862b4944e97919c5fdaafd5 428 Gene3D G3DSA:3.40.390.50 247 354 2.2E-5 T 12-10-2018 vfu_B00367 be09c157d862b4944e97919c5fdaafd5 428 Pfam PF04471 Restriction endonuclease 38 128 6.8E-7 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 vfu_B00367 be09c157d862b4944e97919c5fdaafd5 428 SUPERFAMILY SSF52980 65 131 1.13E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_B00367 be09c157d862b4944e97919c5fdaafd5 428 Pfam PF06114 IrrE N-terminal-like domain 293 416 7.2E-16 T 12-10-2018 IPR010359 IrrE N-terminal-like domain vfu_A00466 c854807533b330df7dc99affaec092a0 199 SUPERFAMILY SSF53335 18 195 5.44E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00466 c854807533b330df7dc99affaec092a0 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A00466 c854807533b330df7dc99affaec092a0 199 PIRSF PIRSF004553 18 198 7.8E-55 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 vfu_A00466 c854807533b330df7dc99affaec092a0 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 1.3E-63 T 12-10-2018 vfu_A00466 c854807533b330df7dc99affaec092a0 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 3.4E-62 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 vfu_A00466 c854807533b330df7dc99affaec092a0 199 Gene3D G3DSA:3.40.50.150 7 199 3.9E-64 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 42.801 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 85 113 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 324 347 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 215 243 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 10 34 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 126 143 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 176 200 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 PRINTS PR01874 DNA repair protein radA signature 250 276 8.9E-94 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.5E-223 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 SUPERFAMILY SSF54211 257 455 2.81E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02873 14b09909023262c7b5a11cb530df2795 459 Gene3D G3DSA:3.30.230.10 322 458 2.9E-20 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A02873 14b09909023262c7b5a11cb530df2795 459 SMART SM00382 93 246 1.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02873 14b09909023262c7b5a11cb530df2795 459 Gene3D G3DSA:3.40.50.300 68 281 1.7E-38 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 Pfam PF13481 AAA domain 84 224 6.2E-14 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 4.1E-9 T 12-10-2018 vfu_A02873 14b09909023262c7b5a11cb530df2795 459 SUPERFAMILY SSF52540 70 291 2.59E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 SUPERFAMILY SSF54631 138 274 8.91E-12 T 12-10-2018 vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 SUPERFAMILY SSF158791 35 131 2.62E-13 T 12-10-2018 vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 SUPERFAMILY SSF161093 277 447 2.22E-46 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 SMART SM00924 35 138 4.1E-13 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 Pfam PF03448 MgtE intracellular N domain 40 136 1.5E-13 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 Pfam PF01769 Divalent cation transporter 320 441 2.4E-23 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 Gene3D G3DSA:3.10.580.10 134 259 2.8E-32 T 12-10-2018 vfu_B00629 baf3428fa54b59e1f9bccda37574ff19 449 Gene3D G3DSA:1.10.357.20 275 448 2.5E-46 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 SUPERFAMILY SSF51419 48 275 1.13E-40 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 SUPERFAMILY SSF50621 246 393 2.33E-22 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 277 361 3.1E-4 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 Gene3D G3DSA:2.40.37.10 41 406 5.6E-141 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 Gene3D G3DSA:3.20.20.10 49 276 5.6E-141 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 PIRSF PIRSF038941 29 406 2.3E-127 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 vfu_A01726 b63db2079f2e0601390a1b905b8a738c 411 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 40 404 9.0E-164 T 12-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 vfu_A00265 521a9c2f1386e2d33ef0a90d891c7b29 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 5 185 2.9E-37 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 vfu_A00265 521a9c2f1386e2d33ef0a90d891c7b29 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 41.133 T 12-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 vfu_A00265 521a9c2f1386e2d33ef0a90d891c7b29 185 Pfam PF01300 Telomere recombination 9 185 9.1E-50 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 vfu_A00265 521a9c2f1386e2d33ef0a90d891c7b29 185 SUPERFAMILY SSF55821 3 178 2.59E-56 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily vfu_A00265 521a9c2f1386e2d33ef0a90d891c7b29 185 Gene3D G3DSA:3.90.870.10 2 183 1.6E-62 T 12-10-2018 vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 SUPERFAMILY SSF52540 295 487 7.82E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 SMART SM00962 299 492 1.1E-64 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 Gene3D G3DSA:1.20.120.1380 271 483 1.6E-57 T 12-10-2018 vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 387 3.5E-86 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 SMART SM00382 298 436 7.3E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 Pfam PF00448 SRP54-type protein, GTPase domain 301 489 4.3E-38 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A01251 642cff5c8b3e980b8e06c9c78097a986 512 Gene3D G3DSA:3.40.50.300 294 480 1.6E-57 T 12-10-2018 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 SUPERFAMILY SSF54534 175 273 4.38E-25 T 12-10-2018 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Gene3D G3DSA:3.10.50.40 177 384 1.4E-74 T 12-10-2018 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 SUPERFAMILY SSF109998 28 200 5.1E-35 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Pfam PF00639 PPIC-type PPIASE domain 287 378 3.2E-22 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Hamap MF_01183 Chaperone SurA [surA]. 7 426 31.805 T 12-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Gene3D G3DSA:1.10.4030.10 24 150 1.2E-34 T 12-10-2018 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Pfam PF09312 SurA N-terminal domain 27 144 3.0E-41 T 12-10-2018 IPR015391 SurA N-terminal vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Gene3D G3DSA:3.10.50.40 281 383 1.4E-74 T 12-10-2018 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 Pfam PF13616 PPIC-type PPIASE domain 165 272 2.7E-21 T 12-10-2018 vfu_A03070 04afec182cce5a0e1ae0fc8d247700ad 431 SUPERFAMILY SSF54534 281 383 1.37E-29 T 12-10-2018 vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 SMART SM01068 1 63 9.9E-19 T 12-10-2018 IPR009342 Putative carbohydrate binding domain vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 1.3E-205 T 12-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 Gene3D G3DSA:1.50.10.10 311 722 4.1E-131 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 SUPERFAMILY SSF74650 1 269 1.26E-80 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 Gene3D G3DSA:2.70.98.40 1 302 7.0E-116 T 12-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 Gene3D G3DSA:2.60.420.10 723 800 2.5E-28 T 12-10-2018 vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 Pfam PF06165 Glycosyltransferase family 36 21 267 8.5E-85 T 12-10-2018 IPR010383 Glycosyl hydrolase 94 vfu_A00907 333b828b8a5fb313f17f0cde7ef6d185 800 SUPERFAMILY SSF48208 273 782 2.91E-107 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 SUPERFAMILY SSF47384 119 190 8.83E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 Pfam PF13188 PAS domain 20 66 3.1E-7 T 12-10-2018 IPR000014 PAS domain vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 SUPERFAMILY SSF55874 179 340 5.89E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 Gene3D G3DSA:3.30.565.10 192 347 8.6E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 124 188 3.3E-10 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 Gene3D G3DSA:3.30.450.20 10 110 6.2E-7 T 12-10-2018 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 SUPERFAMILY SSF55785 7 87 2.28E-9 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 2.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 336 2.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 2.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 2.7E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 Gene3D G3DSA:1.10.287.130 111 187 9.8E-9 T 12-10-2018 vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 338 1.7E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 SMART SM00091 20 83 1.7E-5 T 12-10-2018 IPR000014 PAS domain vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 SMART SM00387 233 339 9.6E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01187 194b9be5ca2378670c7f031e8c3bc3d6 350 SMART SM00388 124 190 3.0E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 Gene3D G3DSA:3.40.50.300 186 379 3.7E-77 T 12-10-2018 vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 SUPERFAMILY SSF52540 197 379 1.35E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 1.1E-191 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 Pfam PF00271 Helicase conserved C-terminal domain 500 588 4.6E-7 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 SMART SM00490 492 589 7.9E-12 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 Pfam PF00270 DEAD/DEAH box helicase 204 364 2.0E-14 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 Gene3D G3DSA:1.10.8.630 4 114 5.5E-36 T 12-10-2018 vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.194 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 SUPERFAMILY SSF52540 461 612 8.31E-27 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00586 8dc6a7c31ba2827c956795506c6520e3 733 SMART SM00487 194 390 5.8E-17 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_B00877 23749430661078a2f15ec392907b4f3c 655 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 512 649 2.4E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_B00877 23749430661078a2f15ec392907b4f3c 655 Gene3D G3DSA:3.40.50.2300 377 481 9.1E-36 T 12-10-2018 vfu_B00877 23749430661078a2f15ec392907b4f3c 655 Pfam PF02378 Phosphotransferase system, EIIC 18 278 3.0E-18 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_B00877 23749430661078a2f15ec392907b4f3c 655 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 555 571 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_B00877 23749430661078a2f15ec392907b4f3c 655 Gene3D G3DSA:3.40.930.10 507 652 3.7E-49 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B00877 23749430661078a2f15ec392907b4f3c 655 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 391 472 4.8E-12 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 vfu_B00877 23749430661078a2f15ec392907b4f3c 655 SUPERFAMILY SSF55804 511 649 3.27E-39 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_B00877 23749430661078a2f15ec392907b4f3c 655 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 7.5E-170 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 vfu_B00877 23749430661078a2f15ec392907b4f3c 655 SUPERFAMILY SSF52794 390 477 9.94E-25 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 vfu_B00626 33f98898cb7a05d57d877b0eb39d0fbe 162 Pfam PF01047 MarR family 31 89 2.0E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00626 33f98898cb7a05d57d877b0eb39d0fbe 162 Gene3D G3DSA:1.10.10.10 3 137 2.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00626 33f98898cb7a05d57d877b0eb39d0fbe 162 SUPERFAMILY SSF46785 4 140 2.85E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00626 33f98898cb7a05d57d877b0eb39d0fbe 162 SMART SM00347 24 124 9.5E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00626 33f98898cb7a05d57d877b0eb39d0fbe 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 63 97 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 Gene3D G3DSA:1.10.287.950 249 436 7.7E-44 T 12-10-2018 vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 SUPERFAMILY SSF55785 156 256 7.68E-21 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 139 7.6E-17 T 12-10-2018 IPR000014 PAS domain vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 260 1.0E-15 T 12-10-2018 IPR000014 PAS domain vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 292 433 3.2E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 SUPERFAMILY SSF58104 232 434 4.45E-53 T 12-10-2018 vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 SMART SM00283 233 434 1.1E-22 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 SUPERFAMILY SSF55785 35 135 4.71E-25 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 SMART SM00086 216 258 1.4E-5 T 12-10-2018 IPR001610 PAC motif vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 SMART SM00086 96 138 1.3E-7 T 12-10-2018 IPR001610 PAC motif vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 Pfam PF13426 PAS domain 40 137 1.6E-13 T 12-10-2018 IPR000014 PAS domain vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 Gene3D G3DSA:3.30.450.20 130 248 6.9E-20 T 12-10-2018 vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 Gene3D G3DSA:3.30.450.20 3 129 2.1E-24 T 12-10-2018 vfu_A02131 ac8992a46650fd7f5fc673f5c7098da6 436 Pfam PF08447 PAS fold 168 251 2.9E-12 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.2E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 SUPERFAMILY SSF52540 63 404 3.13E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 SMART SM00994 13 52 1.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 12-10-2018 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 5.5E-49 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Gene3D G3DSA:3.30.50.30 2 53 2.7E-26 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 SMART SM00382 113 266 1.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Gene3D G3DSA:3.40.50.300 59 317 7.0E-109 T 12-10-2018 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 SMART SM01086 319 414 6.2E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.421 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Gene3D G3DSA:1.10.8.60 318 426 2.4E-41 T 12-10-2018 vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 6.8E-16 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A02429 5fec8d47bf3389a08b5e31c381779e33 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 9.7E-210 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 vfu_A00139 02baa6b461698e9ca0933c2c956888a7 289 SUPERFAMILY SSF56112 141 233 3.48E-9 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_A00139 02baa6b461698e9ca0933c2c956888a7 289 Gene3D G3DSA:3.90.1200.10 129 225 6.5E-7 T 12-10-2018 vfu_A00139 02baa6b461698e9ca0933c2c956888a7 289 Pfam PF01636 Phosphotransferase enzyme family 143 217 1.5E-7 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 4 226 5.32E-58 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 704 914 6.17E-46 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF16187 Middle or third domain of peptidase_M16 366 645 9.8E-84 T 12-10-2018 IPR032632 Peptidase M16, middle/third domain vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 2.8E-38 T 12-10-2018 IPR011765 Peptidase M16, N-terminal vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 619 878 1.8E-108 T 12-10-2018 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 240 468 1.3E-71 T 12-10-2018 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 470 695 4.02E-59 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 1 228 5.6E-87 T 12-10-2018 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF05193 Peptidase M16 inactive domain 651 824 4.5E-9 T 12-10-2018 IPR007863 Peptidase M16, C-terminal vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Pfam PF05193 Peptidase M16 inactive domain 182 359 1.6E-23 T 12-10-2018 IPR007863 Peptidase M16, C-terminal vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 SUPERFAMILY SSF63411 232 467 4.58E-75 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A01248 c7ddc4d1b7ce5af4c5c954fe9f30e82c 926 Gene3D G3DSA:3.30.830.10 470 853 1.8E-108 T 12-10-2018 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 SUPERFAMILY SSF54913 3 114 6.99E-47 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 PRINTS PR00340 P-II protein signature 54 77 1.1E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 PRINTS PR00340 P-II protein signature 25 43 1.1E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 PRINTS PR00340 P-II protein signature 85 105 1.1E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 PRINTS PR00340 P-II protein signature 4 19 1.1E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 ProSitePatterns PS00638 P-II protein C-terminal region signature. 85 98 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 Pfam PF00543 Nitrogen regulatory protein P-II 6 107 1.6E-44 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 Gene3D G3DSA:3.30.70.120 1 114 8.1E-49 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 PIRSF PIRSF039144 3 114 3.0E-58 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 SMART SM00938 6 107 3.3E-69 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A01088 6c2ee61d13daf17256a6635eefcd2575 114 ProSitePatterns PS00496 P-II protein uridylation site. 48 53 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 vfu_A01635 69f8be618133945dc0b0add678d220eb 242 Gene3D G3DSA:3.40.50.150 18 242 3.2E-62 T 12-10-2018 vfu_A01635 69f8be618133945dc0b0add678d220eb 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 7.7E-118 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 vfu_A01635 69f8be618133945dc0b0add678d220eb 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 43.37 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 vfu_A01635 69f8be618133945dc0b0add678d220eb 242 PIRSF PIRSF006325 1 242 1.5E-125 T 12-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 vfu_A01635 69f8be618133945dc0b0add678d220eb 242 SUPERFAMILY SSF53335 20 242 4.8E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01635 69f8be618133945dc0b0add678d220eb 242 Pfam PF13649 Methyltransferase domain 62 158 8.5E-13 T 12-10-2018 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 SUPERFAMILY SSF51735 3 173 4.63E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 486 3.9E-171 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 Gene3D G3DSA:1.20.5.320 452 488 4.6E-17 T 12-10-2018 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 Gene3D G3DSA:3.40.50.720 1 196 1.3E-45 T 12-10-2018 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 170 9.4E-35 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 184 212 3.6E-50 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.6E-50 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 72 101 3.6E-50 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 266 293 3.6E-50 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 373 395 3.6E-50 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 SUPERFAMILY SSF48179 193 488 1.02E-110 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 SMART SM01350 195 486 2.0E-179 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 270 282 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 Gene3D G3DSA:1.10.1040.10 197 451 7.2E-95 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 PIRSF PIRSF000109 1 494 6.7E-169 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01733 1311c25f36aa8812be4ba26d51a47b53 495 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 195 485 2.1E-118 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 Pfam PF00392 Bacterial regulatory proteins, gntR family 54 114 4.4E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 Gene3D G3DSA:1.10.10.10 30 115 1.8E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 SUPERFAMILY SSF48008 120 257 3.4E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 Gene3D G3DSA:1.20.120.530 117 259 1.8E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 Pfam PF07729 FCD domain 124 249 2.2E-26 T 12-10-2018 IPR011711 GntR, C-terminal vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 SUPERFAMILY SSF46785 50 140 3.63E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 SMART SM00895 124 251 3.3E-24 T 12-10-2018 IPR011711 GntR, C-terminal vfu_A01813 19506e9fdaf09d6f5ed401e50e228c29 266 SMART SM00345 56 114 1.1E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.420.40 197 359 3.0E-112 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.1490.110 87 169 3.0E-112 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-24 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 SUPERFAMILY SSF53067 8 221 1.2E-59 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.90.640.10 235 300 3.0E-112 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 PIRSF PIRSF003101 1 420 9.9E-148 T 12-10-2018 IPR020823 Cell division protein FtsA vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.334 T 12-10-2018 IPR020823 Cell division protein FtsA vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 2.5E-28 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 SUPERFAMILY SSF53067 198 384 4.46E-45 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 SMART SM00842 10 196 3.8E-96 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 Gene3D G3DSA:3.30.420.40 13 379 3.0E-112 T 12-10-2018 vfu_A02929 356268159e1f0d57d395446fa741a9ac 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.1E-151 T 12-10-2018 IPR020823 Cell division protein FtsA vfu_B01496 ee68d6f91643fc777e914414c3bd724c 334 SUPERFAMILY SSF64167 26 315 1.83E-42 T 12-10-2018 vfu_B01496 ee68d6f91643fc777e914414c3bd724c 334 Gene3D G3DSA:3.40.1210.10 17 329 4.1E-45 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 vfu_B01496 ee68d6f91643fc777e914414c3bd724c 334 Pfam PF01975 Survival protein SurE 28 233 6.7E-43 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.475 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 Gene3D G3DSA:3.40.50.170 81 277 4.8E-66 T 12-10-2018 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PIRSF PIRSF036480 1 277 2.1E-110 T 12-10-2018 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 SUPERFAMILY SSF53328 82 276 3.14E-59 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 Gene3D G3DSA:3.30.70.260 1 80 3.4E-15 T 12-10-2018 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 Pfam PF01842 ACT domain 5 66 4.2E-8 T 12-10-2018 IPR002912 ACT domain vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.8E-122 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 Pfam PF00551 Formyl transferase 82 259 4.8E-49 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 SUPERFAMILY SSF55021 4 65 8.74E-9 T 12-10-2018 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 9.2E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 9.2E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 9.2E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 9.2E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 9.2E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A02481 6fbd7f5532155a0e5764ae9acc59d279 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 9.2E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 vfu_A01498 4234253ea3f46a388a0959051df8956b 484 Pfam PF02321 Outer membrane efflux protein 77 267 1.5E-15 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01498 4234253ea3f46a388a0959051df8956b 484 Pfam PF02321 Outer membrane efflux protein 300 475 4.9E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01498 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:2.20.200.10 113 363 6.2E-133 T 12-10-2018 vfu_A01498 4234253ea3f46a388a0959051df8956b 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 478 2.4E-153 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 vfu_A01498 4234253ea3f46a388a0959051df8956b 484 Gene3D G3DSA:1.20.1600.10 68 478 6.2E-133 T 12-10-2018 vfu_A01498 4234253ea3f46a388a0959051df8956b 484 SUPERFAMILY SSF56954 17 480 1.96E-88 T 12-10-2018 vfu_A02057 f012013e1247b4c57e18c834e6c731e6 272 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 49 157 7.6E-25 T 12-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02057 f012013e1247b4c57e18c834e6c731e6 272 Gene3D G3DSA:3.40.50.12280 19 185 8.4E-53 T 12-10-2018 vfu_A02057 f012013e1247b4c57e18c834e6c731e6 272 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 132 148 - T 12-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02057 f012013e1247b4c57e18c834e6c731e6 272 SUPERFAMILY SSF56770 37 171 1.96E-51 T 12-10-2018 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 254 3.1E-87 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 PIRSF PIRSF000538 4 504 1.5E-176 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 Gene3D G3DSA:3.30.420.40 256 501 1.9E-94 T 12-10-2018 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 498 1.2E-228 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 Gene3D G3DSA:3.30.420.40 2 255 6.7E-112 T 12-10-2018 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 SUPERFAMILY SSF53067 256 498 8.91E-86 T 12-10-2018 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 452 1.4E-59 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 SUPERFAMILY SSF53067 5 257 2.59E-92 T 12-10-2018 vfu_B00410 39d24106f80ff71372656e8fe48073ab 506 Hamap MF_00186 Glycerol kinase [glpK]. 4 499 58.772 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 vfu_B01000 cc49a620954350510359727f4f204520 277 Gene3D G3DSA:2.60.40.420 85 254 1.3E-57 T 12-10-2018 IPR008972 Cupredoxin vfu_B01000 cc49a620954350510359727f4f204520 277 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 1 211 6.5E-107 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 vfu_B01000 cc49a620954350510359727f4f204520 277 Gene3D G3DSA:1.10.287.90 1 84 2.1E-32 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01000 cc49a620954350510359727f4f204520 277 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 118 196 1.6E-8 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01000 cc49a620954350510359727f4f204520 277 SUPERFAMILY SSF81464 1 88 1.55E-22 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01000 cc49a620954350510359727f4f204520 277 Pfam PF06481 COX Aromatic Rich Motif 211 256 2.6E-18 T 12-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 vfu_B01000 cc49a620954350510359727f4f204520 277 PIRSF PIRSF000292 1 277 6.3E-123 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 vfu_B01000 cc49a620954350510359727f4f204520 277 SUPERFAMILY SSF49503 92 253 6.9E-51 T 12-10-2018 IPR008972 Cupredoxin vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 Pfam PF09334 tRNA synthetases class I (M) 1 242 1.7E-99 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 1.7E-7 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 PRINTS PR01041 Methionyl-tRNA synthetase signature 65 76 1.7E-7 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 PRINTS PR01041 Methionyl-tRNA synthetase signature 17 31 1.7E-7 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 SUPERFAMILY SSF57770 117 151 1.96E-13 T 12-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 Gene3D G3DSA:3.40.50.620 1 135 2.8E-33 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 Gene3D G3DSA:3.40.50.620 136 244 1.4E-31 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02567 b752fb3092709762374ae5010cd0a6b1 244 SUPERFAMILY SSF52374 2 241 2.16E-52 T 12-10-2018 vfu_A01420 d52f0375e132c2aa9eed3bfe5eeb23f6 402 Pfam PF07690 Major Facilitator Superfamily 15 350 5.4E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01420 d52f0375e132c2aa9eed3bfe5eeb23f6 402 SUPERFAMILY SSF103473 6 385 2.22E-40 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01420 d52f0375e132c2aa9eed3bfe5eeb23f6 402 Gene3D G3DSA:1.20.1250.20 3 389 1.7E-36 T 12-10-2018 vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 231 240 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 Gene3D G3DSA:3.90.1150.10 42 372 6.6E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 SUPERFAMILY SSF53383 5 378 6.19E-95 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 Pfam PF00155 Aminotransferase class I and II 42 374 7.3E-50 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 376 1.4E-131 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 4 379 44.826 T 12-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 vfu_A01569 b7a690454a9a67490f72f1ae839c45d1 384 Gene3D G3DSA:3.40.640.10 58 282 6.6E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00361 1c59f3f183810120fe5dcfbaba0ec1fb 211 Gene3D G3DSA:1.10.10.10 95 172 7.6E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00361 1c59f3f183810120fe5dcfbaba0ec1fb 211 Pfam PF04337 Protein of unknown function, DUF480 5 155 1.3E-62 T 12-10-2018 IPR007432 Protein of unknown function DUF480 vfu_B00361 1c59f3f183810120fe5dcfbaba0ec1fb 211 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 205 34.036 T 12-10-2018 IPR007432 Protein of unknown function DUF480 vfu_B00361 1c59f3f183810120fe5dcfbaba0ec1fb 211 Gene3D G3DSA:1.10.10.10 1 90 9.1E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00361 1c59f3f183810120fe5dcfbaba0ec1fb 211 SUPERFAMILY SSF46785 90 171 1.76E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00361 1c59f3f183810120fe5dcfbaba0ec1fb 211 SUPERFAMILY SSF46785 4 84 1.32E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02048 64d5847b27e33784227067caa34b8c12 766 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 758 1.8E-225 T 12-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 PIRSF PIRSF006256 1 765 6.5E-262 T 12-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Gene3D G3DSA:3.30.110.120 252 380 1.2E-142 T 12-10-2018 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Pfam PF01300 Telomere recombination 210 392 1.2E-49 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Gene3D G3DSA:3.90.870.50 6 371 1.2E-142 T 12-10-2018 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 SUPERFAMILY SSF55821 173 398 1.37E-45 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily vfu_A02048 64d5847b27e33784227067caa34b8c12 766 SUPERFAMILY SSF54975 1 88 2.83E-24 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Gene3D G3DSA:3.30.420.350 491 749 8.0E-108 T 12-10-2018 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Pfam PF07503 HypF finger 156 188 2.0E-15 T 12-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Pfam PF07503 HypF finger 106 139 8.4E-17 T 12-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Pfam PF00708 Acylphosphatase 6 87 2.7E-22 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 Gene3D G3DSA:3.30.420.360 393 759 8.0E-108 T 12-10-2018 vfu_A02048 64d5847b27e33784227067caa34b8c12 766 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 Gene3D G3DSA:1.20.1250.20 28 230 1.0E-33 T 12-10-2018 vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 Gene3D G3DSA:1.20.1250.20 246 460 3.2E-37 T 12-10-2018 vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 6.7E-138 T 12-10-2018 vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 Pfam PF07690 Major Facilitator Superfamily 35 396 3.4E-34 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 PIRSF PIRSF002808 10 460 1.1E-106 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 SUPERFAMILY SSF103473 19 450 8.5E-59 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02665 4e6bc7f04ef9817b41ac53e2b278171b 464 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 vfu_A02557 5d9df2f18f7ee9811c36895f4c2aaa88 382 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 1 382 2.2E-112 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) vfu_A02557 5d9df2f18f7ee9811c36895f4c2aaa88 382 Gene3D G3DSA:2.40.160.60 1 382 2.3E-108 T 12-10-2018 vfu_A02557 5d9df2f18f7ee9811c36895f4c2aaa88 382 SUPERFAMILY SSF56935 1 382 7.94E-86 T 12-10-2018 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 29 433 4.3E-166 T 12-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 SUPERFAMILY SSF51338 30 443 1.23E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 SUPERFAMILY SSF51338 30 93 1.05E-5 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 Gene3D G3DSA:3.20.20.140 78 395 6.7E-166 T 12-10-2018 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 Pfam PF01979 Amidohydrolase family 75 436 5.6E-57 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 Gene3D G3DSA:2.30.40.10 12 431 6.7E-166 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_B00184 4a9e179735fcb6c5b56ab3195ed7f747 460 SUPERFAMILY SSF51556 77 380 1.76E-93 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 Hamap MF_01201 Alanine racemase. 1 357 33.371 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 SUPERFAMILY SSF50621 226 358 4.88E-45 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 SUPERFAMILY SSF51419 8 234 8.58E-65 T 12-10-2018 IPR029066 PLP-binding barrel vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 SMART SM01005 233 357 3.9E-62 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 TIGRFAM TIGR00492 alr: alanine racemase 4 356 2.7E-118 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.2E-66 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 4.4E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 266 281 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 339 352 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 155 166 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 120 132 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 192 219 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 26 42 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 249 264 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 287 304 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 PRINTS PR00992 Alanine racemase signature 60 78 2.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 Gene3D G3DSA:2.40.37.10 8 352 2.5E-124 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_B01498 7eca31f166ad9d71141a28d540e657f6 387 Gene3D G3DSA:3.20.20.10 10 217 2.5E-124 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Gene3D G3DSA:1.10.10.60 59 111 2.6E-15 T 12-10-2018 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SUPERFAMILY SSF46689 9 59 4.48E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Gene3D G3DSA:1.10.10.60 1 58 1.9E-20 T 12-10-2018 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 62 104 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SMART SM00871 136 287 2.0E-13 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Gene3D G3DSA:3.20.80.10 136 288 1.7E-24 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Pfam PF12833 Helix-turn-helix domain 31 109 7.5E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SUPERFAMILY SSF55136 210 287 1.6E-17 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SUPERFAMILY SSF46689 62 109 1.88E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 Pfam PF06445 GyrI-like small molecule binding domain 201 286 3.0E-13 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 SMART SM00342 25 108 1.4E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 92 108 8.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A01501 17c4f58b0c8c8ee7bd5b5198e3576ca7 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 77 92 8.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 SUPERFAMILY SSF55326 8 171 2.84E-54 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 Gene3D G3DSA:3.90.650.10 172 346 2.1E-73 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 Gene3D G3DSA:3.30.1330.10 7 171 1.5E-70 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.352 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 SUPERFAMILY SSF56042 172 342 6.28E-62 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 165 1.1E-15 T 12-10-2018 IPR016188 PurM-like, N-terminal domain vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 3.3E-150 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 vfu_A01100 33756ff561434bc3b0c4c2622719de58 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 341 8.8E-39 T 12-10-2018 IPR010918 PurM-like, C-terminal domain vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 SUPERFAMILY SSF53335 76 269 1.2E-49 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 8.7E-11 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.5E-43 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 SMART SM00138 8 272 2.8E-133 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 SUPERFAMILY SSF47757 3 75 3.4E-15 T 12-10-2018 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 Gene3D G3DSA:3.40.50.150 75 274 3.2E-59 T 12-10-2018 vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 Gene3D G3DSA:1.10.155.10 1 74 4.0E-11 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily vfu_A01119 fd080e3c09d49c568b3b8446055d7e38 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 7.4E-68 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal vfu_A02342 f46c1c547df3092f81345d652ac13663 439 SUPERFAMILY SSF69304 165 437 4.18E-58 T 12-10-2018 vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Pfam PF07676 WD40-like Beta Propeller Repeat 246 281 1.5E-7 T 12-10-2018 IPR011659 WD40-like Beta Propeller vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Pfam PF07676 WD40-like Beta Propeller Repeat 211 237 5.0E-9 T 12-10-2018 IPR011659 WD40-like Beta Propeller vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Pfam PF07676 WD40-like Beta Propeller Repeat 289 325 3.3E-13 T 12-10-2018 IPR011659 WD40-like Beta Propeller vfu_A02342 f46c1c547df3092f81345d652ac13663 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 6 436 1.0E-170 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Gene3D G3DSA:2.120.10.30 174 439 1.8E-98 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Gene3D G3DSA:3.40.50.10070 12 172 1.2E-49 T 12-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Pfam PF04052 TolB amino-terminal domain 13 115 3.5E-36 T 12-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 vfu_A02342 f46c1c547df3092f81345d652ac13663 439 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 1 435 51.097 T 12-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 vfu_A02342 f46c1c547df3092f81345d652ac13663 439 SUPERFAMILY SSF52964 18 170 1.96E-42 T 12-10-2018 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 SUPERFAMILY SSF58104 231 540 5.89E-66 T 12-10-2018 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 SMART SM00304 211 263 1.8E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 352 506 8.2E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 Pfam PF00672 HAMP domain 211 259 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 Gene3D G3DSA:1.10.287.950 211 541 1.1E-67 T 12-10-2018 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 10 183 1.3E-9 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 4.0E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 4.0E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 4.0E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.0E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01503 019ca1e93f2e0c85236e14e5bb8060f5 541 SMART SM00283 278 539 3.0E-71 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00056 6a5b2384635361b72a8306ea2689dc74 129 Gene3D G3DSA:1.20.1290.10 2 125 9.6E-41 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B00056 6a5b2384635361b72a8306ea2689dc74 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 117 3.1E-23 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B00056 6a5b2384635361b72a8306ea2689dc74 129 SUPERFAMILY SSF69118 4 122 4.19E-36 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 1.9E-38 T 12-10-2018 IPR032244 LapD/MoxY, periplasmic domain vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 385 9.1E-11 T 12-10-2018 IPR000160 GGDEF domain vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 Gene3D G3DSA:3.30.1040.50 102 151 6.3E-17 T 12-10-2018 vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 SMART SM00052 403 635 9.4E-11 T 12-10-2018 IPR001633 EAL domain vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 SMART SM00267 226 398 5.7E-8 T 12-10-2018 IPR000160 GGDEF domain vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 Pfam PF00563 EAL domain 411 634 8.9E-40 T 12-10-2018 IPR001633 EAL domain vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 SUPERFAMILY SSF141868 411 635 2.75E-41 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 SUPERFAMILY SSF55073 243 385 3.22E-15 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 Gene3D G3DSA:3.20.20.450 401 636 4.8E-41 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00345 c9a0116a001894f52979df8bfc6a5d9a 636 Gene3D G3DSA:3.30.70.270 221 390 8.2E-19 T 12-10-2018 vfu_A02129 3cf96d27caf208d4448e3ebf4161be3b 437 Gene3D G3DSA:3.40.50.80 311 437 1.8E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A02129 3cf96d27caf208d4448e3ebf4161be3b 437 Pfam PF01794 Ferric reductase like transmembrane component 37 165 2.7E-13 T 12-10-2018 IPR013130 Ferric reductase transmembrane component-like domain vfu_A02129 3cf96d27caf208d4448e3ebf4161be3b 437 SUPERFAMILY SSF63380 230 308 2.55E-13 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A02129 3cf96d27caf208d4448e3ebf4161be3b 437 SUPERFAMILY SSF52343 309 435 2.62E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A02129 3cf96d27caf208d4448e3ebf4161be3b 437 Pfam PF00175 Oxidoreductase NAD-binding domain 319 414 1.3E-6 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_A02129 3cf96d27caf208d4448e3ebf4161be3b 437 Gene3D G3DSA:2.40.30.10 215 310 2.0E-11 T 12-10-2018 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 Gene3D G3DSA:3.90.230.10 4 261 1.4E-98 T 12-10-2018 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 SUPERFAMILY SSF55920 6 255 8.24E-83 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 Hamap MF_01974 Methionine aminopeptidase [map]. 5 253 38.178 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 6.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 6.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 6.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 6.2E-20 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 Pfam PF00557 Metallopeptidase family M24 15 243 1.5E-50 T 12-10-2018 IPR000994 Peptidase M24 vfu_B00831 fe7ebcd090cd1c5ea5e24bd61997fe1b 261 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 252 1.2E-92 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 vfu_A01571 f37ee0cbda3026c9ccd7f2294ca32b97 231 SUPERFAMILY SSF52540 1 215 6.91E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01571 f37ee0cbda3026c9ccd7f2294ca32b97 231 PIRSF PIRSF006755 1 227 4.4E-79 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 vfu_A01571 f37ee0cbda3026c9ccd7f2294ca32b97 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.9E-54 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 vfu_A01571 f37ee0cbda3026c9ccd7f2294ca32b97 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 218 29.575 T 12-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 vfu_A01571 f37ee0cbda3026c9ccd7f2294ca32b97 231 Gene3D G3DSA:3.40.50.300 3 224 4.4E-69 T 12-10-2018 vfu_A01571 f37ee0cbda3026c9ccd7f2294ca32b97 231 Pfam PF13500 AAA domain 4 211 9.1E-39 T 12-10-2018 vfu_A00932 70c83a9a7a773368c022bee035566419 209 SUPERFAMILY SSF53335 30 209 4.18E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00932 70c83a9a7a773368c022bee035566419 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 8.0E-56 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 vfu_A00932 70c83a9a7a773368c022bee035566419 209 Gene3D G3DSA:3.40.50.150 30 209 5.3E-60 T 12-10-2018 vfu_A00932 70c83a9a7a773368c022bee035566419 209 PIRSF PIRSF005461 1 209 1.0E-80 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 vfu_A00932 70c83a9a7a773368c022bee035566419 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.552 T 12-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 vfu_A01562 a2fe1a8bc033122b51a7208f982101de 322 SUPERFAMILY SSF161098 106 304 1.13E-25 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01562 a2fe1a8bc033122b51a7208f982101de 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 130 303 6.0E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01562 a2fe1a8bc033122b51a7208f982101de 322 Gene3D G3DSA:1.10.3720.10 105 309 1.2E-22 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01094 10d477febdeab4c71af75ff8bd9f968d 234 Pfam PF00929 Exonuclease 1 168 3.9E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01094 10d477febdeab4c71af75ff8bd9f968d 234 SMART SM00479 1 177 1.5E-51 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01094 10d477febdeab4c71af75ff8bd9f968d 234 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 217 7.9E-83 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01094 10d477febdeab4c71af75ff8bd9f968d 234 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 1 234 2.4E-99 T 12-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01094 10d477febdeab4c71af75ff8bd9f968d 234 Gene3D G3DSA:3.30.420.10 1 183 1.6E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A01094 10d477febdeab4c71af75ff8bd9f968d 234 SUPERFAMILY SSF53098 1 178 1.6E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 1 504 48.683 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 Gene3D G3DSA:3.40.1450.10 72 304 1.3E-212 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 Pfam PF01676 Metalloenzyme superfamily 2 488 2.4E-80 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 PIRSF PIRSF001492 1 504 1.2E-201 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 SUPERFAMILY SSF53649 3 503 5.5E-76 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 77 291 8.9E-80 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 SUPERFAMILY SSF64158 72 302 3.14E-82 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 Gene3D G3DSA:3.40.720.10 2 501 1.3E-212 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_A00030 adee66338c60cca9f56d0059f1ecbf8f 504 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 1 503 5.0E-227 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 Gene3D G3DSA:3.40.47.10 127 399 1.0E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 Pfam PF02803 Thiolase, C-terminal domain 268 400 6.4E-37 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 Gene3D G3DSA:3.40.47.10 7 273 1.0E-134 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 SUPERFAMILY SSF53901 5 267 2.15E-76 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 7.4E-125 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 SUPERFAMILY SSF53901 268 400 4.22E-35 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 PIRSF PIRSF000429 1 402 2.1E-109 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_B01428 256fe51d1e0bbcffbd262b0aecb3df21 406 Pfam PF00108 Thiolase, N-terminal domain 6 260 1.2E-83 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 191 206 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 SMART SM00382 125 269 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 129 142 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 SUPERFAMILY SSF46689 317 454 3.76E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 Pfam PF02954 Bacterial regulatory protein, Fis family 412 452 4.1E-14 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 SUPERFAMILY SSF52540 105 346 1.86E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 317 326 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 Gene3D G3DSA:3.40.50.300 92 276 1.0E-67 T 12-10-2018 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 Pfam PF06490 Flagellar regulatory protein FleQ 2 83 7.8E-16 T 12-10-2018 IPR010518 Flagellar regulatory FleQ vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 418 435 1.6E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 455 1.6E-10 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 Gene3D G3DSA:1.10.8.60 277 353 1.2E-24 T 12-10-2018 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 Gene3D G3DSA:1.10.10.60 361 456 1.1E-12 T 12-10-2018 vfu_A01186 a6330928825b9ecd0ce71230d7d49225 456 Pfam PF00158 Sigma-54 interaction domain 105 272 1.7E-73 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A00161 abb4cc2e359cbb56c91ddab5e206cd4e 36 Gene3D G3DSA:3.40.50.2020 1 36 7.2E-7 T 12-10-2018 vfu_B01255 f1892168d266128736d680a7926da651 277 Pfam PF03783 Curli production assembly/transport component CsgG 43 256 3.0E-78 T 12-10-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 vfu_B01255 f1892168d266128736d680a7926da651 277 Gene3D G3DSA:3.40.50.10610 128 276 5.4E-52 T 12-10-2018 vfu_B01255 f1892168d266128736d680a7926da651 277 Gene3D G3DSA:3.40.50.10610 30 125 1.4E-34 T 12-10-2018 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 3 45 2.1E-7 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 319 328 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 SUPERFAMILY SSF52540 49 334 1.66E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Gene3D G3DSA:3.40.50.300 47 335 2.2E-130 T 12-10-2018 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 SUPERFAMILY SSF47917 336 464 4.71E-45 T 12-10-2018 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Gene3D G3DSA:1.20.150.20 336 466 8.3E-48 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 1 465 9.5E-233 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Gene3D G3DSA:2.40.30.20 1 46 1.2E-15 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 465 45.044 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 102 328 3.1E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 SUPERFAMILY SSF50615 1 47 6.02E-11 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00348 779b0a44a1f377af14b30dd7cfa8d008 466 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 335 460 1.3E-43 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00847 473 568 2.1E-37 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 631 707 2.9E-22 T 12-10-2018 IPR011709 Domain of unknown function DUF1605 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF00270 DEAD/DEAH box helicase 98 243 3.5E-7 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF11898 Domain of unknown function (DUF3418) 721 1305 3.9E-233 T 12-10-2018 IPR024590 RNA helicase HrpA, C-terminal vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00382 102 393 3.3E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Gene3D G3DSA:1.20.120.1080 457 558 3.2E-19 T 12-10-2018 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Gene3D G3DSA:3.40.50.300 263 430 6.6E-55 T 12-10-2018 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00487 82 269 1.8E-27 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SUPERFAMILY SSF52540 84 614 2.97E-112 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF00271 Helicase conserved C-terminal domain 298 412 2.5E-11 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 23 1305 0.0 T 12-10-2018 IPR010222 RNA helicase HrpA GO:0004004 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Gene3D G3DSA:3.40.50.300 36 262 1.5E-76 T 12-10-2018 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 Pfam PF04408 Helicase associated domain (HA2) 475 567 1.2E-18 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 vfu_A01979 0ce6d5f3c11639bd6bc7bc7decf8502c 1307 SMART SM00490 313 413 8.1E-15 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A01195 6046a1687475ae6626996a5fa194ca3d 618 Pfam PF02120 Flagellar hook-length control protein FliK 489 572 2.2E-26 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal vfu_A01195 6046a1687475ae6626996a5fa194ca3d 618 Gene3D G3DSA:3.30.750.140 468 581 6.4E-33 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 Gene3D G3DSA:3.40.50.10490 8 225 4.2E-82 T 12-10-2018 vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 Pfam PF13580 SIS domain 49 172 7.8E-10 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 302 8.7E-133 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.9 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 Gene3D G3DSA:1.10.8.1080 226 303 4.0E-31 T 12-10-2018 vfu_A00988 823812d070408e2e9f7ec642a2b70c1c 310 SUPERFAMILY SSF53697 12 256 4.89E-74 T 12-10-2018 vfu_B00085 5c3796e9e0bbd1b1ef79b4da36febc94 156 Pfam PF13302 Acetyltransferase (GNAT) domain 16 127 2.4E-9 T 12-10-2018 IPR000182 GNAT domain vfu_B00085 5c3796e9e0bbd1b1ef79b4da36febc94 156 Gene3D G3DSA:3.40.630.30 5 129 1.3E-18 T 12-10-2018 vfu_B00085 5c3796e9e0bbd1b1ef79b4da36febc94 156 SUPERFAMILY SSF55729 10 133 1.74E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 SUPERFAMILY SSF52738 155 344 3.14E-65 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 SUPERFAMILY SSF52172 3 109 7.26E-28 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 SMART SM00448 5 118 1.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 Gene3D G3DSA:3.40.50.180 151 348 8.1E-68 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 344 38.034 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 Pfam PF00072 Response regulator receiver domain 7 110 1.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 PIRSF PIRSF000876 2 348 2.4E-126 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 Pfam PF01339 CheB methylesterase 161 336 2.5E-54 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 vfu_B00977 a004edd65b22a6917e58d46f06b875b9 348 Gene3D G3DSA:3.40.50.2300 2 134 1.4E-30 T 12-10-2018 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 Gene3D G3DSA:3.40.50.2300 197 332 6.3E-29 T 12-10-2018 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 PIRSF PIRSF002867 8 333 5.9E-102 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV vfu_A02065 b0c65af35d709461c1b17a3677884630 333 SMART SM00260 23 169 3.7E-26 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 Gene3D G3DSA:2.40.50.180 53 169 9.5E-30 T 12-10-2018 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 Pfam PF00072 Response regulator receiver domain 204 326 1.4E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 Pfam PF01584 CheW-like domain 44 171 4.1E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 SMART SM00448 202 327 3.0E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 SUPERFAMILY SSF50341 16 174 8.5E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 Gene3D G3DSA:2.30.30.40 45 163 9.5E-30 T 12-10-2018 vfu_A02065 b0c65af35d709461c1b17a3677884630 333 SUPERFAMILY SSF52172 202 330 1.85E-28 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 Pfam PF01047 MarR family 34 88 4.8E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 Gene3D G3DSA:1.10.10.10 2 136 2.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 SUPERFAMILY SSF46785 9 134 6.3E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 SMART SM00347 23 124 3.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A00946 1f74fd009d029ffaa7aa9b2192dea231 136 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 ProSitePatterns PS00216 Sugar transport proteins signature 1. 201 217 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 SUPERFAMILY SSF103473 1 342 1.44E-54 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 1 341 1.5E-101 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 Gene3D G3DSA:1.20.1250.20 1 344 8.1E-100 T 12-10-2018 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 PRINTS PR00171 Sugar transporter signature 3 22 3.7E-19 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 PRINTS PR00171 Sugar transporter signature 246 267 3.7E-19 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 PRINTS PR00171 Sugar transporter signature 156 166 3.7E-19 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 PRINTS PR00171 Sugar transporter signature 269 281 3.7E-19 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 ProSitePatterns PS00217 Sugar transport proteins signature 2. 8 33 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 vfu_B00921 bc6fc43e5d120bf29ebe9634e34a8dbf 356 Pfam PF00083 Sugar (and other) transporter 1 344 5.9E-101 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 vfu_B01481 19fff3eaf6a752177b70261167eda1a9 202 Gene3D G3DSA:3.40.50.1820 1 198 1.1E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B01481 19fff3eaf6a752177b70261167eda1a9 202 Pfam PF02230 Phospholipase/Carboxylesterase 3 196 1.2E-28 T 12-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 vfu_B01481 19fff3eaf6a752177b70261167eda1a9 202 SUPERFAMILY SSF53474 3 198 5.13E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 645 8.9E-220 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:3.40.50.620 25 634 3.2E-241 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00981 b703678d65e1deccc89970b0d2559481 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 939 21.503 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:1.10.730.20 645 940 2.5E-87 T 12-10-2018 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF47323 657 939 4.67E-74 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Gene3D G3DSA:3.90.740.10 195 413 3.2E-241 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Pfam PF06827 Zinc finger found in FPG and IleRS 909 936 7.2E-7 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF50677 203 408 4.32E-55 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 SUPERFAMILY SSF52374 4 652 8.45E-138 T 12-10-2018 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 Pfam PF08264 Anticodon-binding domain of tRNA 690 852 1.3E-26 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 5.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 5.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 vfu_A00981 b703678d65e1deccc89970b0d2559481 948 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 854 2.6E-293 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 vfu_A00819 2b15cb944d1bd4ff6041a71c0c3ef689 102 SUPERFAMILY SSF102829 6 95 2.62E-24 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily vfu_A00819 2b15cb944d1bd4ff6041a71c0c3ef689 102 Pfam PF05164 Cell division protein ZapA 6 89 1.9E-20 T 12-10-2018 IPR007838 Cell division protein ZapA-like vfu_A00819 2b15cb944d1bd4ff6041a71c0c3ef689 102 Gene3D G3DSA:1.20.5.50 52 101 1.4E-5 T 12-10-2018 vfu_A00819 2b15cb944d1bd4ff6041a71c0c3ef689 102 Gene3D G3DSA:1.10.20.30 1 47 7.9E-19 T 12-10-2018 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 PIRSF PIRSF500064 2 807 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 SMART SM00563 300 427 1.2E-26 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 Pfam PF01553 Acyltransferase 289 424 2.1E-23 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.831 T 12-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 SUPERFAMILY SSF69593 283 507 1.24E-25 T 12-10-2018 vfu_A00476 98b3dbdb7c3aa37c1f9a563815e093cc 807 PIRSF PIRSF000437 19 807 0.0 T 12-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 vfu_A02410 c9317aee60efd246b0716f92e0a63691 174 SUPERFAMILY SSF158442 17 163 4.05E-41 T 12-10-2018 IPR023380 DsbB-like superfamily vfu_A02410 c9317aee60efd246b0716f92e0a63691 174 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 3.1E-41 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 vfu_A02410 c9317aee60efd246b0716f92e0a63691 174 Gene3D G3DSA:1.20.1550.10 3 174 1.4E-56 T 12-10-2018 IPR023380 DsbB-like superfamily vfu_A02410 c9317aee60efd246b0716f92e0a63691 174 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.652 T 12-10-2018 IPR022920 Disulphide bond formation protein DsbB vfu_A02213 dc7eb1366d76e3101814966e1fc994b4 480 SUPERFAMILY SSF51338 3 469 4.65E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02213 dc7eb1366d76e3101814966e1fc994b4 480 Pfam PF07969 Amidohydrolase family 45 460 1.8E-41 T 12-10-2018 IPR013108 Amidohydrolase 3 vfu_A02213 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:3.30.1490.130 284 340 3.0E-169 T 12-10-2018 IPR023100 D-aminoacylase, insert domain superfamily GO:0016811 vfu_A02213 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:2.30.40.10 3 428 3.0E-169 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02213 dc7eb1366d76e3101814966e1fc994b4 480 SUPERFAMILY SSF51556 57 415 1.12E-84 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A02213 dc7eb1366d76e3101814966e1fc994b4 480 Gene3D G3DSA:3.20.20.140 56 415 3.0E-169 T 12-10-2018 vfu_A00659 c5ddb9c1ef22fe66929486d01bfb7b57 313 Pfam PF01112 Asparaginase 6 307 2.5E-106 T 12-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 vfu_A00659 c5ddb9c1ef22fe66929486d01bfb7b57 313 Gene3D G3DSA:3.60.20.30 178 313 2.1E-46 T 12-10-2018 vfu_A00659 c5ddb9c1ef22fe66929486d01bfb7b57 313 SUPERFAMILY SSF56235 5 308 1.65E-93 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A00734 a189928026ad9685e061fa005d592128 241 Pfam PF00005 ABC transporter 20 166 5.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00734 a189928026ad9685e061fa005d592128 241 SMART SM00382 28 231 5.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00734 a189928026ad9685e061fa005d592128 241 Gene3D G3DSA:3.40.50.300 2 241 3.5E-71 T 12-10-2018 vfu_A00734 a189928026ad9685e061fa005d592128 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 5.6E-9 T 12-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal vfu_A00734 a189928026ad9685e061fa005d592128 241 SUPERFAMILY SSF52540 3 237 2.27E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00734 a189928026ad9685e061fa005d592128 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 2.5E-126 T 12-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 vfu_A00734 a189928026ad9685e061fa005d592128 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 Pfam PF01566 Natural resistance-associated macrophage protein 43 389 7.6E-121 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 26 382 7.4E-98 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 130 149 2.0E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 102 128 2.0E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 155 176 2.0E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 205 228 2.0E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 PRINTS PR00447 Natural resistance-associated macrophage protein signature 304 323 2.0E-30 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A01912 ddff8f8cb5fec3f9692cab5106dd6f89 414 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 8 414 34.748 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 vfu_A03152 12f79b50091cd20fd5b65ddc9641adce 122 Pfam PF01250 Ribosomal protein S6 3 91 9.6E-29 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03152 12f79b50091cd20fd5b65ddc9641adce 122 SUPERFAMILY SSF54995 1 103 1.19E-38 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03152 12f79b50091cd20fd5b65ddc9641adce 122 Gene3D G3DSA:3.30.70.60 1 92 4.5E-33 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 vfu_A03152 12f79b50091cd20fd5b65ddc9641adce 122 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.9E-39 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03152 12f79b50091cd20fd5b65ddc9641adce 122 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.153 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A03152 12f79b50091cd20fd5b65ddc9641adce 122 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A01800 ca5c48c324bd2007b5d7afd992c0fff1 161 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 97 4.2E-14 T 12-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis vfu_A01800 ca5c48c324bd2007b5d7afd992c0fff1 161 SUPERFAMILY SSF53146 1 108 2.22E-17 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily vfu_A01800 ca5c48c324bd2007b5d7afd992c0fff1 161 Gene3D G3DSA:3.30.420.130 1 108 2.7E-14 T 12-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily vfu_A01680 fef8b26d1d81376c5fa63f6a51b25cc7 82 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 4.3E-18 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 vfu_A02784 75851b64aec344c7394b73c6888963a7 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.593 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A02784 75851b64aec344c7394b73c6888963a7 171 SUPERFAMILY SSF47144 78 170 2.62E-25 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A02784 75851b64aec344c7394b73c6888963a7 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 1.8E-18 T 12-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A02784 75851b64aec344c7394b73c6888963a7 171 SUPERFAMILY SSF46565 1 74 6.8E-17 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A02784 75851b64aec344c7394b73c6888963a7 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 2.4E-42 T 12-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A02784 75851b64aec344c7394b73c6888963a7 171 SMART SM00271 1 66 5.0E-8 T 12-10-2018 IPR001623 DnaJ domain vfu_A02784 75851b64aec344c7394b73c6888963a7 171 Pfam PF00226 DnaJ domain 2 70 8.6E-7 T 12-10-2018 IPR001623 DnaJ domain vfu_A02784 75851b64aec344c7394b73c6888963a7 171 Gene3D G3DSA:1.10.287.110 1 79 1.7E-22 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A02784 75851b64aec344c7394b73c6888963a7 171 Gene3D G3DSA:1.20.1280.20 80 171 4.6E-28 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A02732 89bbf40bb55bf93fffea91066f39d566 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 1.1E-172 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 vfu_A02732 89bbf40bb55bf93fffea91066f39d566 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 7.2E-19 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal vfu_A02732 89bbf40bb55bf93fffea91066f39d566 553 PIRSF PIRSF003128 1 553 5.8E-162 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 vfu_A02732 89bbf40bb55bf93fffea91066f39d566 553 SUPERFAMILY SSF52540 1 514 8.5E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02732 89bbf40bb55bf93fffea91066f39d566 553 Gene3D G3DSA:3.40.50.300 245 552 1.1E-51 T 12-10-2018 vfu_A02732 89bbf40bb55bf93fffea91066f39d566 553 Gene3D G3DSA:3.40.50.300 1 232 8.2E-49 T 12-10-2018 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 Gene3D G3DSA:2.40.40.20 645 768 2.1E-5 T 12-10-2018 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 SUPERFAMILY SSF50692 637 762 1.33E-17 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 Pfam PF00384 Molybdopterin oxidoreductase 106 488 1.1E-23 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 10 758 1.8E-280 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 PIRSF PIRSF000144 1 762 0.0 T 12-10-2018 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 SUPERFAMILY SSF53706 44 627 1.44E-135 T 12-10-2018 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 Pfam PF01568 Molydopterin dinucleotide binding domain 645 752 1.7E-10 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 Gene3D G3DSA:3.40.50.740 117 485 2.0E-63 T 12-10-2018 vfu_B00256 6af727c66d87497bf0ac4ebebdc95a0f 769 Gene3D G3DSA:3.40.228.10 182 408 2.0E-63 T 12-10-2018 vfu_B01392 4b04082832174e38cd652d00e8e44905 338 SUPERFAMILY SSF51735 1 335 2.31E-97 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01392 4b04082832174e38cd652d00e8e44905 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 6.0E-142 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 vfu_B01392 4b04082832174e38cd652d00e8e44905 338 Gene3D G3DSA:3.90.25.10 193 328 8.8E-142 T 12-10-2018 vfu_B01392 4b04082832174e38cd652d00e8e44905 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 6.4E-64 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_B01392 4b04082832174e38cd652d00e8e44905 338 Gene3D G3DSA:3.40.50.720 3 273 8.8E-142 T 12-10-2018 vfu_B01392 4b04082832174e38cd652d00e8e44905 338 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 5.5E-6 T 12-10-2018 vfu_B01392 4b04082832174e38cd652d00e8e44905 338 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 5.5E-6 T 12-10-2018 vfu_B01392 4b04082832174e38cd652d00e8e44905 338 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 5.5E-6 T 12-10-2018 vfu_A02984 da9ed9e061a07c93ffb92d3c45c6bf34 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.665 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 vfu_A02984 da9ed9e061a07c93ffb92d3c45c6bf34 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 1.0E-71 T 12-10-2018 vfu_A02984 da9ed9e061a07c93ffb92d3c45c6bf34 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 6 206 6.0E-81 T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 vfu_A02984 da9ed9e061a07c93ffb92d3c45c6bf34 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 12-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 vfu_A02984 da9ed9e061a07c93ffb92d3c45c6bf34 208 Gene3D G3DSA:3.40.50.150 1 206 4.7E-76 T 12-10-2018 vfu_A02984 da9ed9e061a07c93ffb92d3c45c6bf34 208 SUPERFAMILY SSF53335 12 204 3.99E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Gene3D G3DSA:2.40.50.140 67 130 1.2E-16 T 12-10-2018 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 SUPERFAMILY SSF50249 132 188 2.57E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 SUPERFAMILY SSF50104 1 65 1.14E-10 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 PIRSF PIRSF005901 1 188 1.7E-59 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Gene3D G3DSA:2.40.50.140 131 188 2.5E-19 T 12-10-2018 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 3.1E-18 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Gene3D G3DSA:2.30.30.30 1 64 1.7E-12 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 9.7E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 4.6E-15 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 5.1E-95 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 SMART SM00841 132 187 5.3E-25 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 SMART SM01185 69 124 1.1E-14 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 42.014 T 12-10-2018 IPR011897 Translation elongation factor P-like, YeiP vfu_A02147 c4d001720e9d59c2661cdd2b30cd820d 188 SUPERFAMILY SSF50249 67 129 7.71E-12 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01306 0af773b2eade8895248699c35e65d588 316 SUPERFAMILY SSF53901 3 315 2.25E-71 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01306 0af773b2eade8895248699c35e65d588 316 Gene3D G3DSA:3.40.47.10 1 316 9.3E-127 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01306 0af773b2eade8895248699c35e65d588 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 73.021 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A01306 0af773b2eade8895248699c35e65d588 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 1.2E-34 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A01306 0af773b2eade8895248699c35e65d588 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 6.2E-146 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A01306 0af773b2eade8895248699c35e65d588 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 1.4E-31 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A01343 db7d614e51e964d2405bae999748634f 343 Gene3D G3DSA:3.20.20.120 111 312 2.9E-115 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily vfu_A01343 db7d614e51e964d2405bae999748634f 343 Pfam PF13378 Enolase C-terminal domain-like 139 302 1.1E-12 T 12-10-2018 IPR029065 Enolase C-terminal domain-like vfu_A01343 db7d614e51e964d2405bae999748634f 343 Gene3D G3DSA:3.30.390.10 15 318 2.9E-115 T 12-10-2018 IPR029017 Enolase-like, N-terminal vfu_A01343 db7d614e51e964d2405bae999748634f 343 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 19 323 2.8E-116 T 12-10-2018 vfu_A01343 db7d614e51e964d2405bae999748634f 343 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 16 338 21.299 T 12-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 vfu_A01343 db7d614e51e964d2405bae999748634f 343 SUPERFAMILY SSF54826 13 112 8.64E-25 T 12-10-2018 vfu_A01343 db7d614e51e964d2405bae999748634f 343 SUPERFAMILY SSF51604 118 333 8.78E-47 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily vfu_A01343 db7d614e51e964d2405bae999748634f 343 SMART SM00922 128 225 4.4E-6 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal vfu_B01445 ccab049cedaf483230edf150be848e98 327 SUPERFAMILY SSF53850 98 308 1.16E-36 T 12-10-2018 vfu_B01445 ccab049cedaf483230edf150be848e98 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 5.7E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01445 ccab049cedaf483230edf150be848e98 327 SUPERFAMILY SSF46785 14 121 3.81E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01445 ccab049cedaf483230edf150be848e98 327 Gene3D G3DSA:3.40.190.290 101 305 1.4E-45 T 12-10-2018 vfu_B01445 ccab049cedaf483230edf150be848e98 327 Gene3D G3DSA:1.10.10.10 12 100 2.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01445 ccab049cedaf483230edf150be848e98 327 Pfam PF03466 LysR substrate binding domain 97 305 2.0E-32 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01349 8d9433ffc3b998605d51babcff9bef57 179 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 177 2.3E-34 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 vfu_B01349 8d9433ffc3b998605d51babcff9bef57 179 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 177 19.869 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 vfu_B01349 8d9433ffc3b998605d51babcff9bef57 179 Gene3D G3DSA:3.90.1140.10 1 178 2.2E-39 T 12-10-2018 vfu_B01349 8d9433ffc3b998605d51babcff9bef57 179 SUPERFAMILY SSF55144 6 177 1.92E-32 T 12-10-2018 IPR009097 Cyclic phosphodiesterase vfu_B01349 8d9433ffc3b998605d51babcff9bef57 179 Pfam PF13563 2'-5' RNA ligase superfamily 21 134 2.0E-12 T 12-10-2018 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Gene3D G3DSA:3.30.1490.100 244 356 1.6E-25 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Pfam PF00817 impB/mucB/samB family 14 161 7.6E-50 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Hamap MF_01113 DNA polymerase IV [dinB]. 8 356 36.82 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Gene3D G3DSA:1.10.150.20 173 235 1.0E-13 T 12-10-2018 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 244 343 8.0E-6 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 SUPERFAMILY SSF56672 5 241 6.05E-92 T 12-10-2018 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Gene3D G3DSA:2.30.40.20 28 80 4.4E-65 T 12-10-2018 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 Gene3D G3DSA:3.30.70.270 11 171 4.4E-65 T 12-10-2018 vfu_A01037 e0bcdb084bc6821c8544a69473dce68e 357 SUPERFAMILY SSF100879 248 356 4.32E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF55021 663 739 5.95E-10 T 12-10-2018 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.7E-36 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF13328 HD domain 57 190 3.0E-38 T 12-10-2018 IPR003607 HD/PDEase domain vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 SMART SM00954 250 360 5.4E-64 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:3.30.70.260 662 741 4.0E-16 T 12-10-2018 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF81271 396 462 1.29E-20 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:3.30.460.10 208 340 1.8E-48 T 12-10-2018 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:1.10.3210.10 40 205 2.0E-37 T 12-10-2018 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF81301 195 407 3.76E-61 T 12-10-2018 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 SUPERFAMILY SSF109604 50 205 2.76E-43 T 12-10-2018 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF02824 TGS domain 403 462 6.7E-21 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Pfam PF13291 ACT domain 663 739 1.2E-14 T 12-10-2018 IPR002912 ACT domain vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 739 9.9E-182 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 vfu_A00843 b8ac3fa1f65358daf5ee5800482d5ad9 741 Gene3D G3DSA:3.10.20.30 397 470 1.8E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 Gene3D G3DSA:1.20.1330.10 45 168 6.3E-56 T 12-10-2018 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 1.2E-39 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 SUPERFAMILY SSF64518 1 278 5.75E-71 T 12-10-2018 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 Gene3D G3DSA:1.20.58.1830 7 33 6.3E-56 T 12-10-2018 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 278 7.7E-20 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 Gene3D G3DSA:1.10.8.410 226 278 1.7E-13 T 12-10-2018 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 PRINTS PR00207 Flagellin signature 111 134 2.7E-19 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 PRINTS PR00207 Flagellin signature 37 54 2.7E-19 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02244 f3a06d66a218117b050b67f0d59165e1 279 PRINTS PR00207 Flagellin signature 76 95 2.7E-19 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A00360 4c42bd140d51696eee9c359a9335657a 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 2.0E-119 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 vfu_A00360 4c42bd140d51696eee9c359a9335657a 485 Pfam PF02386 Cation transport protein 39 477 2.1E-89 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 vfu_A00360 4c42bd140d51696eee9c359a9335657a 485 PIRSF PIRSF006247 1 485 2.7E-177 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 3.5E-113 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 4.0E-38 T 12-10-2018 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 Gene3D G3DSA:1.10.3860.10 1 421 1.3E-112 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_A02729 1643a1c6869285db353cdc0c409cfe3b 424 SUPERFAMILY SSF118215 5 406 5.89E-104 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_B01071 d1cacba9d0ba6d985ec77dd6b14ecd52 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 296 2.7E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01071 d1cacba9d0ba6d985ec77dd6b14ecd52 300 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 297 1.4E-92 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 vfu_B01071 d1cacba9d0ba6d985ec77dd6b14ecd52 300 Gene3D G3DSA:1.10.3720.10 71 299 5.0E-32 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01071 d1cacba9d0ba6d985ec77dd6b14ecd52 300 SUPERFAMILY SSF161098 25 294 3.27E-35 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00162 7ab8e5d60b550582cca1d871340239c0 170 Gene3D G3DSA:3.40.50.2020 1 166 5.0E-64 T 12-10-2018 vfu_A00162 7ab8e5d60b550582cca1d871340239c0 170 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 160 1.5E-64 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00162 7ab8e5d60b550582cca1d871340239c0 170 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 170 29.841 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00162 7ab8e5d60b550582cca1d871340239c0 170 SUPERFAMILY SSF53271 2 161 4.4E-43 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A00162 7ab8e5d60b550582cca1d871340239c0 170 Pfam PF00156 Phosphoribosyl transferase domain 43 160 2.2E-12 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:1.10.8.60 315 387 2.6E-21 T 12-10-2018 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SUPERFAMILY SSF52540 144 374 4.48E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SMART SM00448 2 114 9.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Pfam PF02954 Bacterial regulatory protein, Fis family 395 435 6.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SUPERFAMILY SSF52172 2 188 4.84E-37 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SMART SM00382 164 308 9.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:3.40.50.2300 2 130 9.8E-34 T 12-10-2018 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Pfam PF00158 Sigma-54 interaction domain 144 310 1.9E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:3.40.50.300 140 314 2.2E-60 T 12-10-2018 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Gene3D G3DSA:1.10.10.60 388 440 5.3E-14 T 12-10-2018 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 SUPERFAMILY SSF46689 385 438 5.73E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 Pfam PF00072 Response regulator receiver domain 4 114 1.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02433 fe4fe3f333e9c1a7a8adc8db7ea83954 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 Gene3D G3DSA:1.20.120.530 160 303 4.2E-11 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 SMART SM00895 166 290 8.5E-9 T 12-10-2018 IPR011711 GntR, C-terminal vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 74 1.6E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 SUPERFAMILY SSF46785 6 75 1.4E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 Pfam PF07729 FCD domain 167 289 1.9E-8 T 12-10-2018 IPR011711 GntR, C-terminal vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 SUPERFAMILY SSF48008 164 297 1.44E-12 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_B00455 47d9e274169e231e9eee43b191340c3d 325 Gene3D G3DSA:1.10.10.10 2 75 3.3E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 Gene3D G3DSA:2.60.120.10 14 102 1.7E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 SUPERFAMILY SSF51215 33 157 3.79E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 SUPERFAMILY SSF46689 223 272 2.46E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 Pfam PF12833 Helix-turn-helix domain 192 270 2.6E-17 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 Gene3D G3DSA:1.10.10.60 221 274 6.8E-15 T 12-10-2018 vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 Gene3D G3DSA:1.10.10.60 172 220 4.9E-10 T 12-10-2018 vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 SUPERFAMILY SSF46689 173 219 9.41E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00968 368ae56e1d62157a08c463a0eee08048 274 SMART SM00342 186 269 5.3E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 SUPERFAMILY SSF52317 6 184 6.87E-30 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 Pfam PF01965 DJ-1/PfpI family 58 167 1.9E-8 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 Pfam PF12833 Helix-turn-helix domain 227 306 6.1E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 Gene3D G3DSA:3.40.50.880 2 192 4.9E-38 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 SUPERFAMILY SSF46689 205 255 5.38E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 SUPERFAMILY SSF46689 257 309 2.55E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 SMART SM00342 221 304 5.9E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00938 7183247ee3f7c52b9c08506f19bb4f4c 321 Gene3D G3DSA:1.10.10.60 206 310 7.9E-25 T 12-10-2018 vfu_B00965 0d2dfbc7cdac44addf4ff8ce1d3847bd 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 436 2.3E-94 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_B00965 0d2dfbc7cdac44addf4ff8ce1d3847bd 496 Pfam PF00474 Sodium:solute symporter family 35 436 1.4E-105 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_B00965 0d2dfbc7cdac44addf4ff8ce1d3847bd 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site vfu_B00965 0d2dfbc7cdac44addf4ff8ce1d3847bd 496 Gene3D G3DSA:1.20.1730.10 7 495 1.7E-98 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_B00965 0d2dfbc7cdac44addf4ff8ce1d3847bd 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 3.8E-214 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 vfu_B01010 c914756fff0a78afb285d5f7675b35ae 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.0E-33 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp vfu_B01010 c914756fff0a78afb285d5f7675b35ae 172 Gene3D G3DSA:2.30.110.20 2 172 3.7E-68 T 12-10-2018 IPR036624 Hcp1-like superfamily vfu_B01010 c914756fff0a78afb285d5f7675b35ae 172 SUPERFAMILY SSF141452 3 169 2.62E-39 T 12-10-2018 IPR036624 Hcp1-like superfamily vfu_B01010 c914756fff0a78afb285d5f7675b35ae 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 6.6E-64 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp vfu_A01958 c914756fff0a78afb285d5f7675b35ae 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 2.0E-33 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp vfu_A01958 c914756fff0a78afb285d5f7675b35ae 172 Gene3D G3DSA:2.30.110.20 2 172 3.7E-68 T 12-10-2018 IPR036624 Hcp1-like superfamily vfu_A01958 c914756fff0a78afb285d5f7675b35ae 172 SUPERFAMILY SSF141452 3 169 2.62E-39 T 12-10-2018 IPR036624 Hcp1-like superfamily vfu_A01958 c914756fff0a78afb285d5f7675b35ae 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 6.6E-64 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp vfu_B00928 76ff95772334394a9a8c02e9d4d47dd4 478 SMART SM00267 315 478 7.5E-39 T 12-10-2018 IPR000160 GGDEF domain vfu_B00928 76ff95772334394a9a8c02e9d4d47dd4 478 Gene3D G3DSA:3.30.450.20 54 159 5.7E-12 T 12-10-2018 vfu_B00928 76ff95772334394a9a8c02e9d4d47dd4 478 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 328 475 6.7E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B00928 76ff95772334394a9a8c02e9d4d47dd4 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 473 4.7E-35 T 12-10-2018 IPR000160 GGDEF domain vfu_B00928 76ff95772334394a9a8c02e9d4d47dd4 478 Gene3D G3DSA:3.30.70.270 312 478 8.4E-43 T 12-10-2018 vfu_B00928 76ff95772334394a9a8c02e9d4d47dd4 478 SUPERFAMILY SSF55073 331 476 6.67E-35 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 12-10-2018 IPR027486 Ribosomal protein S10 domain vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 12-10-2018 IPR027486 Ribosomal protein S10 domain vfu_A00666 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.50.50.60 150 271 2.4E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 4.1E-68 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.50.50.60 9 332 2.4E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 SUPERFAMILY SSF51905 1 322 7.13E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 2.3E-149 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 4.9E-63 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 Gene3D G3DSA:3.30.390.30 346 467 1.3E-44 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PIRSF PIRSF000350 1 469 7.3E-83 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.0E-41 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.0E-41 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.0E-41 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.0E-41 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.0E-41 T 12-10-2018 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.7E-35 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 vfu_A00882 97a3994c0b94605a25b061a7d738f9ce 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 Gene3D G3DSA:3.40.605.10 15 408 6.6E-150 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 38.582 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 PIRSF PIRSF000151 2 416 5.4E-163 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 Pfam PF00171 Aldehyde dehydrogenase family 8 279 1.1E-14 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 SUPERFAMILY SSF53720 5 408 6.02E-110 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 Gene3D G3DSA:3.40.309.10 223 373 6.6E-150 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 1.3E-164 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 vfu_A01057 b95074d97d73c8c402d3e8c6f9a52e58 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 vfu_A01822 50c6a464c65c4e767d4ec7462a8324c1 160 SUPERFAMILY SSF55729 4 148 3.81E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01822 50c6a464c65c4e767d4ec7462a8324c1 160 Pfam PF00583 Acetyltransferase (GNAT) family 27 146 1.6E-16 T 12-10-2018 IPR000182 GNAT domain vfu_A01822 50c6a464c65c4e767d4ec7462a8324c1 160 Gene3D G3DSA:3.40.630.30 6 137 2.7E-33 T 12-10-2018 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 SUPERFAMILY SSF56796 3 356 2.22E-90 T 12-10-2018 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 Gene3D G3DSA:3.40.50.1970 3 159 6.2E-43 T 12-10-2018 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 3.7E-67 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 PIRSF PIRSF000112 1 360 1.4E-94 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 Gene3D G3DSA:1.20.1090.10 160 360 1.6E-79 T 12-10-2018 vfu_B00885 67544f9ae36fd796f1e487aa0f18df83 360 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Gene3D G3DSA:3.40.350.10 147 289 5.0E-21 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF00557 Metallopeptidase family M24 309 525 4.3E-44 T 12-10-2018 IPR000994 Peptidase M24 vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 129 1.8E-17 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Gene3D G3DSA:3.40.350.10 3 146 6.3E-35 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 7.3E-31 T 12-10-2018 vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Pfam PF16188 C-terminal region of peptidase_M24 534 593 1.6E-22 T 12-10-2018 IPR032416 Peptidase M24, C-terminal domain vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 Gene3D G3DSA:3.90.230.10 300 593 2.7E-95 T 12-10-2018 vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 SUPERFAMILY SSF55920 303 559 4.45E-57 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like vfu_A00382 827cdb54422d8abd5b643e52f9a30c84 596 SUPERFAMILY SSF53092 7 129 9.77E-18 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal vfu_B00711 e0895085da84c6b707c6312d726fef91 404 Gene3D G3DSA:3.40.640.10 57 302 7.8E-153 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 SUPERFAMILY SSF53383 12 398 3.5E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00711 e0895085da84c6b707c6312d726fef91 404 Gene3D G3DSA:3.90.1150.10 22 391 7.8E-153 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 Pfam PF00202 Aminotransferase class-III 22 397 5.6E-126 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 398 9.7E-157 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 69.951 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 400 6.5E-212 T 12-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 PIRSF PIRSF000521 169 400 8.8E-41 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 PIRSF PIRSF000521 26 155 1.0E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00711 e0895085da84c6b707c6312d726fef91 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01640 f4ce750b48f8f168939484f471a455cb 276 SUPERFAMILY SSF51735 4 265 4.31E-25 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01640 f4ce750b48f8f168939484f471a455cb 276 Gene3D G3DSA:3.40.50.720 1 274 1.1E-46 T 12-10-2018 vfu_A01640 f4ce750b48f8f168939484f471a455cb 276 Pfam PF13460 NAD(P)H-binding 9 176 6.7E-14 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A01886 fc00fdd200acada810ce175eb0352fd6 355 SUPERFAMILY SSF81342 122 336 1.26E-45 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 vfu_A01886 fc00fdd200acada810ce175eb0352fd6 355 Gene3D G3DSA:1.20.950.20 121 339 2.4E-63 T 12-10-2018 vfu_A01886 fc00fdd200acada810ce175eb0352fd6 355 Pfam PF01292 Prokaryotic cytochrome b561 128 309 1.7E-25 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 vfu_A01886 fc00fdd200acada810ce175eb0352fd6 355 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 125 329 9.6E-82 T 12-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 SUPERFAMILY SSF53686 10 360 1.57E-105 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 4.5E-25 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.1E-24 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 SUPERFAMILY SSF55021 332 418 2.44E-27 T 12-10-2018 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 Gene3D G3DSA:3.40.50.1100 56 152 2.6E-133 T 12-10-2018 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 Gene3D G3DSA:3.40.1020.10 333 510 1.9E-71 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 SUPERFAMILY SSF55021 415 508 1.49E-25 T 12-10-2018 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 2.8E-250 T 12-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 Gene3D G3DSA:3.40.50.1100 20 322 2.6E-133 T 12-10-2018 vfu_A00292 30724192b8b7e94acb0400d95635c88c 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 311 1.5E-82 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme vfu_B00097 3f2e7bfe84b8bab3dbdff2c80b9fc753 334 Gene3D G3DSA:3.40.50.1360 60 325 2.3E-80 T 12-10-2018 vfu_B00097 3f2e7bfe84b8bab3dbdff2c80b9fc753 334 SUPERFAMILY SSF100950 70 320 5.11E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B00097 3f2e7bfe84b8bab3dbdff2c80b9fc753 334 Gene3D G3DSA:1.10.10.60 9 59 1.0E-18 T 12-10-2018 vfu_B00097 3f2e7bfe84b8bab3dbdff2c80b9fc753 334 Pfam PF04198 Putative sugar-binding domain 66 320 4.9E-77 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 vfu_A02650 f605636a02267dea47ae7a9cf2e0c86a 156 Gene3D G3DSA:3.40.1280.10 1 156 4.6E-53 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_A02650 f605636a02267dea47ae7a9cf2e0c86a 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 9.7E-78 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 vfu_A02650 f605636a02267dea47ae7a9cf2e0c86a 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.3E-49 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 vfu_A02650 f605636a02267dea47ae7a9cf2e0c86a 156 PIRSF PIRSF004505 1 155 2.2E-44 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 vfu_A02650 f605636a02267dea47ae7a9cf2e0c86a 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.549 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 vfu_A02650 f605636a02267dea47ae7a9cf2e0c86a 156 SUPERFAMILY SSF75217 2 154 2.51E-50 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_B00236 6bcbd194624310253333e22ca8062167 250 Gene3D G3DSA:3.30.2010.10 42 128 2.3E-8 T 12-10-2018 vfu_B00236 6bcbd194624310253333e22ca8062167 250 Pfam PF01435 Peptidase family M48 48 234 2.8E-45 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 vfu_A02462 c944b225030313240071a54a2dc1342d 286 Gene3D G3DSA:3.40.50.720 6 259 2.5E-106 T 12-10-2018 vfu_A02462 c944b225030313240071a54a2dc1342d 286 SUPERFAMILY SSF53223 1 122 3.55E-39 T 12-10-2018 vfu_A02462 c944b225030313240071a54a2dc1342d 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 3.3E-38 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.5E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.57 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 Gene3D G3DSA:3.40.50.10860 8 276 2.5E-106 T 12-10-2018 vfu_A02462 c944b225030313240071a54a2dc1342d 286 SUPERFAMILY SSF51735 123 280 2.93E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02462 c944b225030313240071a54a2dc1342d 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A02462 c944b225030313240071a54a2dc1342d 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 5.0E-67 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 PIRSF PIRSF005246 1 1486 0.0 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Pfam PF16330 MukB hinge domain 647 811 1.1E-72 T 12-10-2018 IPR032520 MukB, hinge domain vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 SUPERFAMILY SSF52540 21 1434 1.13E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1472 10.844 T 12-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Gene3D G3DSA:3.40.1140.10 1 227 6.4E-98 T 12-10-2018 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 SUPERFAMILY SSF52540 23 224 2.13E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Gene3D G3DSA:1.20.58.850 621 831 3.6E-134 T 12-10-2018 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Gene3D G3DSA:1.20.58.850 583 853 3.6E-134 T 12-10-2018 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Pfam PF04310 MukB N-terminal 2 227 1.0E-121 T 12-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Gene3D G3DSA:3.40.1140.10 1383 1469 5.9E-39 T 12-10-2018 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.7E-15 T 12-10-2018 vfu_A01629 61f13219076d994e201ceca58697b4cb 1486 Gene3D G3DSA:1.20.1060.30 668 779 3.6E-134 T 12-10-2018 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.0E-183 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.738 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 SUPERFAMILY SSF51412 6 336 2.49E-97 T 12-10-2018 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 Gene3D G3DSA:3.20.20.70 1 345 4.7E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 PIRSF PIRSF000235 1 347 1.4E-193 T 12-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 4.0E-78 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 vfu_B00663 4080dd741c3bd861a06c746aa1dd0bce 347 SMART SM01240 7 344 2.1E-134 T 12-10-2018 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 Pfam PF13432 Tetratricopeptide repeat 105 163 1.6E-4 T 12-10-2018 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 100 133 29.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 274 307 66.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 338 371 66.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 SMART SM00028 137 170 440.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 Gene3D G3DSA:1.25.40.10 168 304 7.4E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 SUPERFAMILY SSF48452 32 227 8.73E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 SUPERFAMILY SSF48452 267 372 6.64E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 Gene3D G3DSA:1.25.40.10 306 375 2.5E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01852 4b1668f687022195e6332707d8b56ee5 392 Gene3D G3DSA:1.25.40.10 12 167 3.5E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 64 79 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 Pfam PF01235 Sodium:alanine symporter family 26 426 1.2E-139 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 PRINTS PR00175 Sodium/alanine symporter signature 384 404 3.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 PRINTS PR00175 Sodium/alanine symporter signature 279 297 3.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 PRINTS PR00175 Sodium/alanine symporter signature 184 203 3.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 PRINTS PR00175 Sodium/alanine symporter signature 325 347 3.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 PRINTS PR00175 Sodium/alanine symporter signature 64 86 3.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 PRINTS PR00175 Sodium/alanine symporter signature 156 174 3.4E-52 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01952 67289aad7ebb1614a95c0f630ab8e5e8 433 TIGRFAM TIGR00835 agcS: amino acid carrier protein 1 414 8.4E-150 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.3E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.3E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.3E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 7.1E-44 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.582 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 Gene3D G3DSA:2.40.50.100 21 85 1.0E-31 T 12-10-2018 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03079 a1d82f35fd7d9d426674f6878d9c7d54 85 SUPERFAMILY SSF110324 2 80 8.72E-35 T 12-10-2018 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 SUPERFAMILY SSF74731 2 116 5.62E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 Gene3D G3DSA:1.10.720.90 2 55 1.1E-24 T 12-10-2018 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 Pfam PF00453 Ribosomal protein L20 3 108 9.9E-49 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.596 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.5E-52 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00044 070ac683e597a207494e9cfb26acddbf 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 2.0E-22 T 12-10-2018 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.2E-81 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 2.2E-121 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 SUPERFAMILY SSF101801 247 323 1.96E-13 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 7.6E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 7.6E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 7.6E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 7.6E-19 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 9.5E-17 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 PIRSF PIRSF002888 1 328 1.6E-92 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 Gene3D G3DSA:3.40.1550.10 43 230 4.1E-55 T 12-10-2018 IPR028976 CheC-like superfamily vfu_A01197 b4dd357fc91d823ffa31c3185c839b3d 352 SUPERFAMILY SSF103039 4 230 4.53E-23 T 12-10-2018 IPR028976 CheC-like superfamily vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 Gene3D G3DSA:1.10.287.130 436 534 6.0E-29 T 12-10-2018 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 Gene3D G3DSA:3.30.450.20 222 375 8.4E-19 T 12-10-2018 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 SUPERFAMILY SSF47384 455 537 1.33E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 Pfam PF02743 Cache domain 130 354 1.5E-16 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 SMART SM00388 471 536 7.9E-24 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 Pfam PF00512 His Kinase A (phospho-acceptor) domain 471 536 1.0E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 697 1.6E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 SMART SM00387 582 698 4.4E-41 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 Gene3D G3DSA:3.30.565.10 535 702 3.0E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 651 1.8E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 623 637 1.8E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 676 1.8E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 695 1.8E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00258 4f052cd3eb9238b8d730fc9dab98a284 807 SUPERFAMILY SSF55874 525 695 1.7E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 Gene3D G3DSA:3.30.190.20 21 225 1.5E-81 T 12-10-2018 vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.402 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 4.3E-52 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 Gene3D G3DSA:3.40.50.790 68 159 1.5E-81 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 PIRSF PIRSF002155 1 227 6.1E-79 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.8E-107 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 SUPERFAMILY SSF56808 6 225 1.16E-82 T 12-10-2018 IPR023674 Ribosomal protein L1-like vfu_A00041 cc4fbad50ee177752c2b29a07f9d8641 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SMART SM00387 592 707 6.6E-38 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Pfam PF09308 LuxQ, periplasmic 41 278 4.9E-103 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SUPERFAMILY SSF103190 52 270 1.45E-69 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Gene3D G3DSA:3.30.450.220 51 207 4.0E-60 T 12-10-2018 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Pfam PF00072 Response regulator receiver domain 733 843 1.5E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SUPERFAMILY SSF52172 732 847 1.42E-29 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SMART SM00448 731 843 1.3E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Gene3D G3DSA:3.40.50.2300 718 854 1.6E-30 T 12-10-2018 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 592 706 8.8E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Gene3D G3DSA:1.10.287.130 472 545 4.8E-22 T 12-10-2018 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Gene3D G3DSA:3.30.450.20 344 471 1.1E-5 T 12-10-2018 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Gene3D G3DSA:2.20.20.100 208 272 2.0E-12 T 12-10-2018 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Gene3D G3DSA:3.30.565.10 546 710 6.5E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SMART SM00388 480 545 8.3E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SUPERFAMILY SSF55874 534 705 3.27E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 9 358 4.0E-130 T 12-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 SUPERFAMILY SSF47384 469 546 2.55E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 545 3.5E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 660 1.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 691 704 1.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 632 646 1.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00358 0fe92b6c7beacbcb84f3bebd35e891d6 858 PRINTS PR00344 Bacterial sensor protein C-terminal signature 667 685 1.2E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00546 5b82e95980da629d037245a906535303 266 Gene3D G3DSA:1.10.3720.10 65 260 4.3E-25 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00546 5b82e95980da629d037245a906535303 266 SUPERFAMILY SSF161098 68 254 7.72E-32 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00546 5b82e95980da629d037245a906535303 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 256 3.3E-32 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 Gene3D G3DSA:1.10.3190.10 54 166 4.2E-36 T 12-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.46 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 1.0E-77 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 PIRSF PIRSF006272 1 166 6.7E-76 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 Pfam PF03887 YfbU domain 1 166 1.5E-68 T 12-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 Gene3D G3DSA:1.10.287.680 1 53 6.1E-32 T 12-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily vfu_A02379 48490f6b3779545e3e39c4c2a0d40cda 166 SUPERFAMILY SSF116960 1 166 1.14E-62 T 12-10-2018 vfu_B01146 05ebd62907b237accdadfcce38e460cd 317 SUPERFAMILY SSF103481 194 298 2.75E-11 T 12-10-2018 vfu_B01146 05ebd62907b237accdadfcce38e460cd 317 Pfam PF00892 EamA-like transporter family 158 294 1.7E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01146 05ebd62907b237accdadfcce38e460cd 317 Pfam PF00892 EamA-like transporter family 15 143 1.2E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01146 05ebd62907b237accdadfcce38e460cd 317 SUPERFAMILY SSF103481 46 145 3.4E-14 T 12-10-2018 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 SMART SM00957 6 403 0.0 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 ProSitePatterns PS01312 SecA family signature. 501 516 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF81767 227 369 2.75E-43 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 101 115 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 377 394 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 414 427 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 170 190 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 340 362 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 63 87 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 PRINTS PR00906 SecA protein signature 117 127 2.2E-72 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.5E-66 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF81886 620 892 8.5E-84 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF52540 418 610 2.66E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 SUPERFAMILY SSF52540 5 416 4.56E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.40.50.300 418 620 1.4E-86 T 12-10-2018 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF07517 SecA DEAD-like domain 7 403 9.0E-134 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 SMART SM00958 228 359 8.5E-83 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:1.10.3060.10 621 833 5.3E-76 T 12-10-2018 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.90.1440.10 229 369 2.1E-176 T 12-10-2018 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF01043 SecA preprotein cross-linking domain 232 359 8.5E-39 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.039 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Gene3D G3DSA:3.40.50.300 22 416 2.1E-176 T 12-10-2018 vfu_A02925 5bbc0d1588b2553b02bd46e8fe96147e 904 Pfam PF02810 SEC-C motif 884 902 3.3E-10 T 12-10-2018 IPR004027 SEC-C motif vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.4E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 SUPERFAMILY SSF117143 78 395 1.44E-69 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 9.8E-94 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 Gene3D G3DSA:2.60.98.20 154 315 8.0E-23 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 2.4E-21 T 12-10-2018 IPR011491 Flagellar hook protein FlgE vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A01124 2f004748315d3b5ac37ee732124b4a10 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 1.5E-15 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 8.6E-10 T 12-10-2018 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 8.6E-10 T 12-10-2018 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 327 1.8E-84 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 Gene3D G3DSA:3.20.20.70 1 367 6.8E-122 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51905 373 664 1.37E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 374 628 8.3E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 Gene3D G3DSA:3.50.50.60 468 620 1.8E-108 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 Gene3D G3DSA:3.40.50.720 374 661 1.8E-108 T 12-10-2018 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51971 332 515 1.26E-41 T 12-10-2018 vfu_A02482 3051d4931b70dc40f2f6e0fe001a3fd5 667 SUPERFAMILY SSF51395 2 361 5.38E-108 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.50.100 714 788 9.5E-32 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.50.150 833 954 3.6E-44 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.269 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.8E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1100.10 442 618 2.5E-65 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1100.10 647 713 2.7E-21 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 8.6E-58 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1100.10 19 156 2.0E-48 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.8E-23 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 233 6.1E-8 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 337 454 2.6E-16 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.270.10 1001 1241 1.4E-88 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1110.10 300 441 2.5E-35 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 1.4E-156 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:2.40.270.10 790 832 1.7E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 12-10-2018 vfu_A00038 2a17ffae7030cd12b9eb8aa558b64fe5 1342 Gene3D G3DSA:3.90.1110.10 157 264 4.8E-28 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 SUPERFAMILY SSF51569 4 356 1.81E-131 T 12-10-2018 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 Gene3D G3DSA:3.20.20.70 2 358 5.0E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 99 111 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 PIRSF PIRSF001359 13 358 1.9E-97 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 9.7E-182 T 12-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 3.7E-91 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A03035 c94576dac3ebf4179a5788a1260e273b 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 2.2E-112 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 Gene3D G3DSA:2.60.410.10 280 370 1.8E-25 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 119 136 6.5E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 146 159 6.5E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 6.5E-18 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 SUPERFAMILY SSF69189 280 372 4.9E-21 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 SMART SM00936 280 370 1.2E-25 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 4.8E-20 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 Gene3D G3DSA:3.40.710.10 18 278 1.3E-93 T 12-10-2018 vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 SUPERFAMILY SSF56601 10 280 1.47E-86 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_B00614 e9821c764a524a108e55900c269c3cfa 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 260 1.0E-88 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 SMART SM00871 149 299 4.3E-22 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 SUPERFAMILY SSF55136 151 298 8.72E-29 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 SUPERFAMILY SSF46689 18 69 2.96E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 Gene3D G3DSA:1.10.10.60 69 122 4.6E-16 T 12-10-2018 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 Gene3D G3DSA:1.10.10.60 10 68 3.5E-16 T 12-10-2018 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 SMART SM00342 35 119 3.5E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 Pfam PF06445 GyrI-like small molecule binding domain 150 298 6.2E-29 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 103 7.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 103 119 7.4E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 SUPERFAMILY SSF46689 72 120 2.91E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 Gene3D G3DSA:3.20.80.10 150 299 7.0E-32 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_B00163 0ef773171121eb5ddc80245f9e2b5280 301 Pfam PF12833 Helix-turn-helix domain 41 119 9.4E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00380 c97c46b154a0dea611ceb5e939bd0f1e 394 Gene3D G3DSA:3.40.605.10 1 249 2.2E-94 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A00380 c97c46b154a0dea611ceb5e939bd0f1e 394 Gene3D G3DSA:3.40.309.10 250 388 9.5E-45 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A00380 c97c46b154a0dea611ceb5e939bd0f1e 394 Pfam PF00171 Aldehyde dehydrogenase family 16 386 3.4E-132 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A00380 c97c46b154a0dea611ceb5e939bd0f1e 394 SUPERFAMILY SSF53720 3 386 2.36E-131 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A00380 c97c46b154a0dea611ceb5e939bd0f1e 394 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_A00380 c97c46b154a0dea611ceb5e939bd0f1e 394 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 Gene3D G3DSA:2.170.280.10 180 193 6.4E-57 T 12-10-2018 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 Pfam PF00700 Bacterial flagellin C-terminal helical region 193 277 1.2E-19 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 141 1.6E-38 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 Gene3D G3DSA:1.20.1330.10 45 179 6.4E-57 T 12-10-2018 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 Gene3D G3DSA:1.10.8.410 225 277 1.7E-13 T 12-10-2018 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 Gene3D G3DSA:1.20.58.1830 7 33 6.4E-57 T 12-10-2018 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 SUPERFAMILY SSF64518 1 277 1.14E-71 T 12-10-2018 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 PRINTS PR00207 Flagellin signature 76 95 2.7E-19 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 PRINTS PR00207 Flagellin signature 111 134 2.7E-19 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02240 957953b99c7db68d531155bd05778a5d 278 PRINTS PR00207 Flagellin signature 37 54 2.7E-19 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 Gene3D G3DSA:3.30.1440.10 1 142 1.2E-65 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 Pfam PF00281 Ribosomal protein L5 1 43 5.0E-18 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 SUPERFAMILY SSF55282 1 142 2.83E-64 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 Pfam PF00673 ribosomal L5P family C-terminus 47 140 9.7E-42 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 ProSitePatterns PS00358 Ribosomal protein L5 signature. 20 36 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 142 32.772 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00679 b9242c76682098ee6e7b27e9f2fcc46e 142 PIRSF PIRSF002161 1 142 2.5E-54 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02795 d504badb637a254e4ff8d398f9bc2662 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 369 3.8E-178 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 vfu_A02795 d504badb637a254e4ff8d398f9bc2662 379 SUPERFAMILY SSF51713 3 366 4.05E-164 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 vfu_A02795 d504badb637a254e4ff8d398f9bc2662 379 Gene3D G3DSA:3.20.20.105 1 370 4.6E-174 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 vfu_A02795 d504badb637a254e4ff8d398f9bc2662 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.463 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 vfu_A02795 d504badb637a254e4ff8d398f9bc2662 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 2.0E-96 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 vfu_A02795 d504badb637a254e4ff8d398f9bc2662 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 369 8.3E-187 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 Pfam PF02119 Flagellar P-ring protein 20 360 3.3E-136 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 7.6E-85 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01128 467bffb250c8515bf76bd83d38f98f1a 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 39.691 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02373 f822a6b00ed8011e6c4f5887d7ac1c81 53 Gene3D G3DSA:3.20.70.20 1 53 2.1E-22 T 12-10-2018 vfu_A02373 f822a6b00ed8011e6c4f5887d7ac1c81 53 SUPERFAMILY SSF51998 1 52 3.85E-22 T 12-10-2018 vfu_A02373 f822a6b00ed8011e6c4f5887d7ac1c81 53 ProSitePatterns PS00850 Glycine radical domain signature. 23 31 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site vfu_A02373 f822a6b00ed8011e6c4f5887d7ac1c81 53 Pfam PF01228 Glycine radical 1 34 2.4E-16 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 SUPERFAMILY SSF52172 16 199 4.84E-39 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:3.40.50.300 146 325 5.2E-64 T 12-10-2018 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:1.10.8.60 326 400 4.4E-17 T 12-10-2018 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 SMART SM00382 175 318 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:1.10.10.60 434 480 9.0E-12 T 12-10-2018 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 SUPERFAMILY SSF46689 367 480 1.57E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Pfam PF00158 Sigma-54 interaction domain 155 320 8.3E-69 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 SUPERFAMILY SSF52540 154 384 2.7E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 SMART SM00448 16 127 2.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Pfam PF00072 Response regulator receiver domain 18 128 1.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Pfam PF02954 Bacterial regulatory protein, Fis family 439 480 8.7E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01874 43dd83e883e7f9f8012ae16b110096b8 489 Gene3D G3DSA:3.40.50.2300 14 145 3.3E-31 T 12-10-2018 vfu_A02579 2a49c781c76722934420326be43d1aad 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 286 4.7E-73 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 vfu_A02579 2a49c781c76722934420326be43d1aad 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 267 3.0E-101 T 12-10-2018 IPR010119 Gluconeogenesis factor vfu_A02579 2a49c781c76722934420326be43d1aad 296 SUPERFAMILY SSF142338 6 291 1.44E-83 T 12-10-2018 vfu_A02579 2a49c781c76722934420326be43d1aad 296 Gene3D G3DSA:3.40.50.12300 4 295 6.9E-76 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily vfu_A02579 2a49c781c76722934420326be43d1aad 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 30.188 T 12-10-2018 IPR010119 Gluconeogenesis factor vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 SUPERFAMILY SSF53850 91 291 1.37E-34 T 12-10-2018 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Gene3D G3DSA:3.40.190.10 92 287 3.2E-53 T 12-10-2018 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Gene3D G3DSA:3.40.190.10 162 266 3.2E-53 T 12-10-2018 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Pfam PF03466 LysR substrate binding domain 91 289 4.0E-38 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-23 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 Gene3D G3DSA:1.10.10.10 1 84 3.1E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01964 fd8f04cf6e7ed15dfb6f3f67899a0b8d 294 SUPERFAMILY SSF46785 1 81 1.89E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02455 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:1.10.1400.10 491 681 3.0E-126 T 12-10-2018 vfu_A02455 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:1.10.439.10 2 167 6.0E-39 T 12-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 vfu_A02455 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:3.60.20.10 194 739 3.0E-126 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02455 1b40d065c96c968ffad7730146328d59 754 Pfam PF01804 Penicillin amidase 8 741 5.2E-92 T 12-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 vfu_A02455 1b40d065c96c968ffad7730146328d59 754 SUPERFAMILY SSF56235 7 746 1.03E-103 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02455 1b40d065c96c968ffad7730146328d59 754 Gene3D G3DSA:2.30.120.10 275 349 3.0E-126 T 12-10-2018 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 SUPERFAMILY SSF55620 6 213 6.97E-75 T 12-10-2018 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 93 109 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 141 151 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 31 214 34.307 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 Gene3D G3DSA:1.10.286.10 1 81 2.2E-35 T 12-10-2018 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 Gene3D G3DSA:3.30.1130.10 82 214 1.9E-52 T 12-10-2018 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 35 213 6.1E-80 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 vfu_B00101 0272add6dc9b6eabe14e574c91c252b5 214 Pfam PF01227 GTP cyclohydrolase I 35 212 2.7E-64 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 1 300 49.922 T 12-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 Gene3D G3DSA:3.20.20.70 1 232 6.8E-73 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 PIRSF PIRSF006621 1 304 3.2E-68 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 SUPERFAMILY SSF51395 2 302 3.48E-67 T 12-10-2018 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 Pfam PF01207 Dihydrouridine synthase (Dus) 1 287 1.9E-72 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 82 100 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A01548 73b06d07d7cfd461acd1cad77391bd9e 305 Gene3D G3DSA:1.20.225.30 233 302 1.0E-23 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 SUPERFAMILY SSF103190 162 231 2.59E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 SMART SM00471 582 891 0.0015 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 SUPERFAMILY SSF109604 786 920 9.74E-10 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Gene3D G3DSA:3.30.450.20 220 338 7.3E-6 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Gene3D G3DSA:3.30.450.20 136 219 1.1E-12 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Gene3D G3DSA:3.30.450.40 399 558 1.1E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 SUPERFAMILY SSF55781 405 567 1.96E-5 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Pfam PF02743 Cache domain 44 307 1.4E-13 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 SUPERFAMILY SSF109604 577 658 1.32E-7 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Gene3D G3DSA:1.10.3210.10 791 934 1.6E-29 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Gene3D G3DSA:1.10.3210.10 560 666 3.7E-20 T 12-10-2018 vfu_B00574 46bda80abd3ff08d59402232e10c239c 958 Pfam PF13487 HD domain 808 873 2.7E-25 T 12-10-2018 vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 PRINTS PR00625 DnaJ domain signature 240 255 2.8E-11 T 12-10-2018 IPR001623 DnaJ domain vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 PRINTS PR00625 DnaJ domain signature 264 284 2.8E-11 T 12-10-2018 IPR001623 DnaJ domain vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 PRINTS PR00625 DnaJ domain signature 222 240 2.8E-11 T 12-10-2018 IPR001623 DnaJ domain vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 Pfam PF05099 Tellurite resistance protein TerB 44 177 2.7E-17 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 Pfam PF00226 DnaJ domain 220 282 5.9E-14 T 12-10-2018 IPR001623 DnaJ domain vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 SMART SM00271 219 284 1.9E-20 T 12-10-2018 IPR001623 DnaJ domain vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 285 39.873 T 12-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 Gene3D G3DSA:1.10.287.110 195 284 6.2E-18 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 SUPERFAMILY SSF46565 138 282 4.5E-33 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A03068 7ee285a9482f15bad24ad17e4647f14d 286 Gene3D G3DSA:1.10.3680.10 43 191 1.3E-25 T 12-10-2018 IPR029024 TerB-like vfu_B00963 fa476978477b7e933a920782fab5e873 629 SMART SM00304 295 352 4.6E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00963 fa476978477b7e933a920782fab5e873 629 SMART SM00304 355 405 46.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00963 fa476978477b7e933a920782fab5e873 629 Gene3D G3DSA:3.30.450.20 53 272 1.5E-52 T 12-10-2018 vfu_B00963 fa476978477b7e933a920782fab5e873 629 SUPERFAMILY SSF58104 320 629 1.96E-76 T 12-10-2018 vfu_B00963 fa476978477b7e933a920782fab5e873 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 595 1.7E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00963 fa476978477b7e933a920782fab5e873 629 SMART SM00283 367 628 1.8E-73 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00963 fa476978477b7e933a920782fab5e873 629 Gene3D G3DSA:3.30.450.20 64 171 1.5E-52 T 12-10-2018 vfu_B00963 fa476978477b7e933a920782fab5e873 629 SUPERFAMILY SSF103190 77 174 2.62E-8 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B00963 fa476978477b7e933a920782fab5e873 629 Pfam PF02743 Cache domain 39 260 3.6E-28 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_B00963 fa476978477b7e933a920782fab5e873 629 Gene3D G3DSA:1.10.287.950 298 629 1.5E-68 T 12-10-2018 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 Hamap MF_00577 Urocanate hydratase [hutU]. 4 558 49.488 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 12-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 SUPERFAMILY SSF111326 11 557 2.35E-260 T 12-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 PIRSF PIRSF001423 1 563 4.9E-295 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 Gene3D G3DSA:3.40.1770.10 22 544 8.1E-258 T 12-10-2018 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.0E-291 T 12-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 Pfam PF17392 Urocanase C-terminal domain 354 548 1.0E-91 T 12-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 Pfam PF01175 Urocanase Rossmann-like domain 146 351 2.8E-84 T 12-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 Pfam PF17391 Urocanase N-terminal domain 17 143 7.9E-63 T 12-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02154 22100298b5e8f0a3b238dd0ffc9339c6 565 Gene3D G3DSA:3.40.50.10730 147 351 8.1E-258 T 12-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 Pfam PF03144 Elongation factor Tu domain 2 134 202 6.8E-17 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 Gene3D G3DSA:2.40.30.10 247 302 2.5E-29 T 12-10-2018 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 SUPERFAMILY SSF50447 114 210 2.75E-30 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 SUPERFAMILY SSF50465 207 302 1.24E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 Gene3D G3DSA:2.40.30.10 115 243 2.2E-52 T 12-10-2018 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 Gene3D G3DSA:3.40.50.300 1 112 1.1E-33 T 12-10-2018 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 Pfam PF00009 Elongation factor Tu GTP binding domain 1 110 8.7E-23 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 Pfam PF03143 Elongation factor Tu C-terminal domain 207 301 1.1E-33 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 302 8.9E-173 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 PRINTS PR00315 GTP-binding elongation factor signature 40 49 7.8E-5 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 PRINTS PR00315 GTP-binding elongation factor signature 3 14 7.8E-5 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A03155 35157581dc6529c7e4144d94836f8e89 303 SUPERFAMILY SSF52540 1 128 1.38E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01561 18a609f41e5ff1f9de1175ab8cd8b276 454 Pfam PF13379 NMT1-like family 28 308 4.7E-108 T 12-10-2018 vfu_A01561 18a609f41e5ff1f9de1175ab8cd8b276 454 SUPERFAMILY SSF53850 34 335 1.55E-21 T 12-10-2018 vfu_A01561 18a609f41e5ff1f9de1175ab8cd8b276 454 Gene3D G3DSA:3.40.190.10 34 432 2.7E-142 T 12-10-2018 vfu_A01561 18a609f41e5ff1f9de1175ab8cd8b276 454 Gene3D G3DSA:3.40.190.10 119 437 2.7E-142 T 12-10-2018 vfu_A02644 ee3fbfe23395c26955763e3821775478 513 Gene3D G3DSA:3.60.110.10 213 482 3.5E-14 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A02644 ee3fbfe23395c26955763e3821775478 513 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 455 8.3E-98 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 vfu_A02644 ee3fbfe23395c26955763e3821775478 513 Pfam PF00795 Carbon-nitrogen hydrolase 223 472 2.3E-39 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 vfu_A02644 ee3fbfe23395c26955763e3821775478 513 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 492 23.652 T 12-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 vfu_A02644 ee3fbfe23395c26955763e3821775478 513 SUPERFAMILY SSF56317 215 488 4.06E-44 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_B00212 b43331824a17e1d536fa23d669a0b461 157 Pfam PF10711 Hypothetical protein (DUF2513) 14 135 5.3E-25 T 12-10-2018 IPR019650 Protein of unknown function DUF2513 vfu_A01917 b43331824a17e1d536fa23d669a0b461 157 Pfam PF10711 Hypothetical protein (DUF2513) 14 135 5.3E-25 T 12-10-2018 IPR019650 Protein of unknown function DUF2513 vfu_B00218 b43331824a17e1d536fa23d669a0b461 157 Pfam PF10711 Hypothetical protein (DUF2513) 14 135 5.3E-25 T 12-10-2018 IPR019650 Protein of unknown function DUF2513 vfu_A02919 0b73ec7432802147038202e848f10b5c 150 Gene3D G3DSA:2.40.128.20 1 150 1.1E-73 T 12-10-2018 IPR012674 Calycin vfu_A02919 0b73ec7432802147038202e848f10b5c 150 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 1 136 6.0E-65 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 vfu_A02919 0b73ec7432802147038202e848f10b5c 150 Pfam PF05870 Phenolic acid decarboxylase (PAD) 1 148 2.4E-81 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 vfu_A02919 0b73ec7432802147038202e848f10b5c 150 SUPERFAMILY SSF50814 1 149 2.35E-65 T 12-10-2018 IPR012674 Calycin vfu_A01899 af8e151e7dd8a8382697a8a909233be2 315 Pfam PF00582 Universal stress protein family 185 301 5.7E-14 T 12-10-2018 IPR006016 UspA vfu_A01899 af8e151e7dd8a8382697a8a909233be2 315 Pfam PF00582 Universal stress protein family 4 148 4.4E-13 T 12-10-2018 IPR006016 UspA vfu_A01899 af8e151e7dd8a8382697a8a909233be2 315 Gene3D G3DSA:3.40.50.12370 1 312 1.4E-108 T 12-10-2018 vfu_A01899 af8e151e7dd8a8382697a8a909233be2 315 SUPERFAMILY SSF52402 168 308 3.52E-23 T 12-10-2018 vfu_A01899 af8e151e7dd8a8382697a8a909233be2 315 SUPERFAMILY SSF52402 4 158 1.59E-24 T 12-10-2018 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.3E-224 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 SMART SM00863 652 695 1.4E-22 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:3.10.310.40 748 857 1.9E-32 T 12-10-2018 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF50447 453 551 3.07E-19 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:2.40.30.130 462 551 2.4E-12 T 12-10-2018 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:3.30.54.20 623 676 1.4E-50 T 12-10-2018 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.16 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF101353 255 461 6.54E-59 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF55186 551 710 1.18E-53 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Pfam PF02272 DHHA1 domain 722 856 2.2E-28 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 SUPERFAMILY SSF55681 3 254 8.2E-109 T 12-10-2018 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:3.30.980.10 562 696 1.4E-50 T 12-10-2018 vfu_A02977 826ac7dedd901972d9d7bfb7f1360bc1 860 Gene3D G3DSA:3.30.930.10 2 251 2.1E-119 T 12-10-2018 vfu_B00668 af9798298252710c98ad680ad836c465 224 SUPERFAMILY SSF52172 2 124 1.04E-12 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00668 af9798298252710c98ad680ad836c465 224 SUPERFAMILY SSF46894 135 220 2.32E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00668 af9798298252710c98ad680ad836c465 224 Gene3D G3DSA:1.10.10.10 133 223 8.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00668 af9798298252710c98ad680ad836c465 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 2.7E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00668 af9798298252710c98ad680ad836c465 224 SMART SM00862 148 219 1.5E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00668 af9798298252710c98ad680ad836c465 224 Gene3D G3DSA:3.40.50.2300 1 118 6.6E-11 T 12-10-2018 vfu_A01356 18e6191bcde5276de9d8b84ff920cd5f 120 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A01356 18e6191bcde5276de9d8b84ff920cd5f 120 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 118 1.1E-31 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 vfu_A01356 18e6191bcde5276de9d8b84ff920cd5f 120 PIRSF PIRSF002889 1 120 1.8E-31 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 vfu_A01356 18e6191bcde5276de9d8b84ff920cd5f 120 Pfam PF00460 Flagella basal body rod protein 11 38 2.7E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 SUPERFAMILY SSF46689 176 225 5.82E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 Gene3D G3DSA:1.10.10.60 124 180 6.6E-12 T 12-10-2018 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 176 218 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 Gene3D G3DSA:1.10.10.60 181 228 2.9E-16 T 12-10-2018 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 SMART SM00342 139 222 1.1E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 SUPERFAMILY SSF46689 127 172 3.54E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01491 54bbf83d4b2ae71a1ac021b258156927 229 Pfam PF12833 Helix-turn-helix domain 145 223 8.8E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00636 881788aa5450d4f7a5ac8cfbc59154cd 506 Pfam PF05036 Sporulation related domain 419 492 3.1E-8 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 vfu_A00636 881788aa5450d4f7a5ac8cfbc59154cd 506 Gene3D G3DSA:3.30.70.1070 408 503 3.3E-26 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_A00636 881788aa5450d4f7a5ac8cfbc59154cd 506 SUPERFAMILY SSF52540 26 189 9.93E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00636 881788aa5450d4f7a5ac8cfbc59154cd 506 Gene3D G3DSA:3.40.50.300 10 160 3.7E-8 T 12-10-2018 vfu_A00636 881788aa5450d4f7a5ac8cfbc59154cd 506 Pfam PF13401 AAA domain 27 150 2.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 1.8E-57 T 12-10-2018 vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 PIRSF PIRSF009283 1 355 2.2E-125 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 SUPERFAMILY SSF54593 6 341 4.47E-79 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 Gene3D G3DSA:3.10.180.10 3 155 3.9E-48 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 4.4E-133 T 12-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 274 1.1E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_A01827 07391cebb7ee6a61249451a2fd64280c 357 Gene3D G3DSA:3.10.180.10 158 355 3.0E-69 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 Gene3D G3DSA:3.30.1490.20 121 194 1.5E-32 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 Gene3D G3DSA:3.30.470.20 195 389 6.6E-61 T 12-10-2018 vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 Gene3D G3DSA:3.40.50.20 1 120 9.1E-53 T 12-10-2018 vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 SUPERFAMILY SSF56059 111 313 9.19E-58 T 12-10-2018 vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.85 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 3.1E-193 T 12-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 Pfam PF02222 ATP-grasp domain 121 292 6.7E-57 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 SUPERFAMILY SSF52440 2 110 2.16E-34 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A02130 4005a9ccd500d2d1b7d110c7ce66d175 391 SUPERFAMILY SSF51246 317 389 4.39E-18 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 vfu_A03093 6de48f23726c6e87131a080f010b5355 139 PIRSF PIRSF018193 8 139 2.5E-58 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B vfu_A03093 6de48f23726c6e87131a080f010b5355 139 Gene3D G3DSA:3.30.70.970 1 132 2.9E-59 T 12-10-2018 IPR036701 RraB-like superfamily vfu_A03093 6de48f23726c6e87131a080f010b5355 139 Pfam PF06877 Regulator of ribonuclease activity B 18 120 2.4E-35 T 12-10-2018 IPR009671 Regulator of ribonuclease activity B domain vfu_A03093 6de48f23726c6e87131a080f010b5355 139 SUPERFAMILY SSF89946 8 126 4.97E-40 T 12-10-2018 IPR036701 RraB-like superfamily vfu_A03093 6de48f23726c6e87131a080f010b5355 139 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.022 T 12-10-2018 IPR016716 Regulator of ribonuclease activity B vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 Gene3D G3DSA:1.10.10.10 5 99 4.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 Gene3D G3DSA:3.40.190.10 100 285 8.4E-32 T 12-10-2018 vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 Pfam PF03466 LysR substrate binding domain 89 288 6.2E-19 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 SUPERFAMILY SSF53850 90 292 7.78E-20 T 12-10-2018 vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 4.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 Gene3D G3DSA:3.40.190.10 163 258 8.4E-32 T 12-10-2018 vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 SUPERFAMILY SSF46785 3 82 9.85E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00788 09c4041139cdb5e63314b6f0fd25bcb0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.7E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 Gene3D G3DSA:3.30.160.40 222 307 1.3E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 SUPERFAMILY SSF53850 6 220 6.29E-86 T 12-10-2018 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 39.677 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 7.2E-20 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 3.2E-79 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 PIRSF PIRSF001438 1 312 1.3E-120 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 Gene3D G3DSA:3.40.190.10 101 200 1.0E-84 T 12-10-2018 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 SUPERFAMILY SSF54782 222 310 3.4E-27 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 Gene3D G3DSA:3.40.190.10 7 217 1.0E-84 T 12-10-2018 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 1.2E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 1.2E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 1.2E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.2E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 1.2E-47 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00433 e21ed6c9fcf8090661b32bbcc8da769c 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 1.6E-113 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 166 6.1E-72 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 SUPERFAMILY SSF55200 78 166 6.67E-34 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 ProSitePatterns PS00938 Initiation factor 3 signature. 53 66 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 71 5.5E-28 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 Gene3D G3DSA:3.30.110.10 71 166 6.3E-39 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 Gene3D G3DSA:3.10.20.80 1 70 2.2E-28 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 164 8.9E-37 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 SUPERFAMILY SSF54364 2 73 2.22E-25 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 vfu_B00042 d101610ec600f68a6040bb50774b1adf 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 27.978 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.50.100 195 244 2.8E-26 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.50.100 128 170 8.2E-8 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 99 390 5.3E-31 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.30.170 245 318 2.8E-26 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.50.320 494 564 1.7E-15 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.50.320 413 484 3.0E-18 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:2.40.420.20 323 412 1.1E-20 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Pfam PF11604 Copper binding periplasmic protein CusF 497 562 1.2E-18 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Pfam PF11604 Copper binding periplasmic protein CusF 417 482 9.8E-22 T 12-10-2018 IPR021647 Copper binding periplasmic protein CusF vfu_A01434 392ac2293bd365433105153e11caf3ce 568 SUPERFAMILY SSF111369 130 322 1.57E-14 T 12-10-2018 vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 7.6E-77 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A01434 392ac2293bd365433105153e11caf3ce 568 Gene3D G3DSA:1.10.287.470 185 194 2.8E-26 T 12-10-2018 vfu_B01152 4061004e21d6f70242770d1409086e41 510 Gene3D G3DSA:3.20.20.450 254 505 7.4E-71 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01152 4061004e21d6f70242770d1409086e41 510 SMART SM00052 255 493 1.5E-80 T 12-10-2018 IPR001633 EAL domain vfu_B01152 4061004e21d6f70242770d1409086e41 510 Pfam PF00563 EAL domain 264 488 2.4E-58 T 12-10-2018 IPR001633 EAL domain vfu_B01152 4061004e21d6f70242770d1409086e41 510 SUPERFAMILY SSF141868 261 500 1.44E-69 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01336 da39f6c1636c313dde73a413b1434fee 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.713 T 12-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 vfu_A01336 da39f6c1636c313dde73a413b1434fee 194 Pfam PF13023 HD domain 11 159 2.9E-16 T 12-10-2018 IPR006674 HD domain vfu_A01336 da39f6c1636c313dde73a413b1434fee 194 SMART SM00471 26 151 3.6E-4 T 12-10-2018 IPR003607 HD/PDEase domain vfu_A01336 da39f6c1636c313dde73a413b1434fee 194 Gene3D G3DSA:1.10.3210.10 1 194 1.3E-82 T 12-10-2018 vfu_A01336 da39f6c1636c313dde73a413b1434fee 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 5.0E-35 T 12-10-2018 vfu_A01336 da39f6c1636c313dde73a413b1434fee 194 SUPERFAMILY SSF109604 4 185 4.4E-43 T 12-10-2018 vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 Pfam PF12840 Helix-turn-helix domain 18 76 9.6E-10 T 12-10-2018 vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 SUPERFAMILY SSF46785 10 99 1.21E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 Gene3D G3DSA:1.10.10.10 5 100 2.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 SMART SM00418 18 96 2.2E-20 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 1.1E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 1.1E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00287 a8ef99f5a46d528a0aa1c00cd0089b09 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 1.1E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A01317 ec79860b76e9c24aef0f525eea6d88b6 539 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 474 491 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A01317 ec79860b76e9c24aef0f525eea6d88b6 539 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 427 523 1.5E-18 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 vfu_A01317 ec79860b76e9c24aef0f525eea6d88b6 539 Pfam PF00367 phosphotransferase system, EIIB 463 495 8.2E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A01317 ec79860b76e9c24aef0f525eea6d88b6 539 Pfam PF02378 Phosphotransferase system, EIIC 10 363 2.6E-76 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A01317 ec79860b76e9c24aef0f525eea6d88b6 539 Gene3D G3DSA:3.30.1360.60 456 539 4.9E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A01317 ec79860b76e9c24aef0f525eea6d88b6 539 SUPERFAMILY SSF55604 461 537 3.14E-17 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A00106 4232f01c28b14bdec121b74655851189 205 SUPERFAMILY SSF51735 11 202 5.31E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00106 4232f01c28b14bdec121b74655851189 205 Gene3D G3DSA:3.40.50.720 2 205 2.4E-53 T 12-10-2018 vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 152 6.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 188 6.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 104 6.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 41 52 6.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 114 133 6.2E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 200 1.8E-46 T 12-10-2018 vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 102 3.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 114 133 3.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00106 4232f01c28b14bdec121b74655851189 205 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 41 52 3.1E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01440 2123bd64f151d2faa9070fc77d744871 370 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 128 345 2.0E-13 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 vfu_A01440 2123bd64f151d2faa9070fc77d744871 370 Gene3D G3DSA:3.40.50.2000 50 204 2.3E-15 T 12-10-2018 vfu_A01440 2123bd64f151d2faa9070fc77d744871 370 SUPERFAMILY SSF53756 56 358 4.71E-36 T 12-10-2018 vfu_A01440 2123bd64f151d2faa9070fc77d744871 370 Gene3D G3DSA:3.40.50.2000 222 366 1.0E-16 T 12-10-2018 vfu_B00801 abec61b8c7fc93be5efce92e7253c142 703 SUPERFAMILY SSF103473 314 696 3.53E-49 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00801 abec61b8c7fc93be5efce92e7253c142 703 Gene3D G3DSA:1.20.1250.20 313 693 9.3E-50 T 12-10-2018 vfu_B00801 abec61b8c7fc93be5efce92e7253c142 703 Pfam PF07690 Major Facilitator Superfamily 314 628 1.0E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 SUPERFAMILY SSF53850 108 293 2.17E-55 T 12-10-2018 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:3.40.190.10 192 277 7.6E-54 T 12-10-2018 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 SUPERFAMILY SSF48600 7 95 4.21E-19 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:3.40.190.10 112 286 7.6E-54 T 12-10-2018 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 Pfam PF01817 Chorismate mutase type II 12 91 1.1E-16 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 Pfam PF00800 Prephenate dehydratase 109 290 1.0E-58 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:1.20.59.10 3 111 5.7E-32 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 SMART SM00830 12 93 2.5E-22 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 3.3E-28 T 12-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 PIRSF PIRSF001500 1 383 1.7E-141 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 SUPERFAMILY SSF55021 283 380 8.39E-25 T 12-10-2018 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 vfu_A01003 af6d5c0b9bc455464c8b3972c72eff6c 393 Gene3D G3DSA:3.30.70.260 295 382 3.0E-24 T 12-10-2018 vfu_A01586 7e007901c9035a5e40f2f88b08810123 413 SUPERFAMILY SSF53613 10 395 4.05E-44 T 12-10-2018 IPR029056 Ribokinase-like vfu_A01586 7e007901c9035a5e40f2f88b08810123 413 Pfam PF00294 pfkB family carbohydrate kinase 56 273 2.5E-11 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 SUPERFAMILY SSF52172 6 166 1.05E-38 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 Pfam PF00072 Response regulator receiver domain 10 119 3.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 Gene3D G3DSA:3.30.70.270 141 316 1.2E-54 T 12-10-2018 vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 SMART SM00267 141 317 6.2E-60 T 12-10-2018 IPR000160 GGDEF domain vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 148 317 9.0E-48 T 12-10-2018 IPR000160 GGDEF domain vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 Gene3D G3DSA:3.40.50.2300 3 140 3.3E-35 T 12-10-2018 vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 SMART SM00448 8 121 1.9E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 SUPERFAMILY SSF55073 157 317 1.99E-47 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00294 2a6dea89099a8c9aa0e18c4a67b50376 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 152 313 9.5E-47 T 12-10-2018 IPR000160 GGDEF domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Gene3D G3DSA:3.10.350.10 270 323 3.9E-14 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Gene3D G3DSA:3.10.350.10 344 397 3.7E-16 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Gene3D G3DSA:3.10.350.10 399 454 2.3E-13 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SUPERFAMILY SSF53955 41 191 2.93E-41 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SUPERFAMILY SSF54106 272 316 9.81E-11 T 12-10-2018 vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SUPERFAMILY SSF54106 403 448 5.36E-11 T 12-10-2018 vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Pfam PF01464 Transglycosylase SLT domain 55 156 9.8E-22 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Gene3D G3DSA:1.10.530.10 39 193 2.1E-29 T 12-10-2018 vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SMART SM00257 273 316 2.2E-11 T 12-10-2018 IPR018392 LysM domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SMART SM00257 347 391 9.7E-15 T 12-10-2018 IPR018392 LysM domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SMART SM00257 404 448 3.9E-9 T 12-10-2018 IPR018392 LysM domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 63 91 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Pfam PF01476 LysM domain 274 316 1.7E-11 T 12-10-2018 IPR018392 LysM domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Pfam PF01476 LysM domain 405 447 6.0E-13 T 12-10-2018 IPR018392 LysM domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 Pfam PF01476 LysM domain 348 391 3.9E-13 T 12-10-2018 IPR018392 LysM domain vfu_A01090 437d59f6ab1bea9c672f2eb9308a2958 456 SUPERFAMILY SSF54106 346 391 8.37E-12 T 12-10-2018 vfu_B01460 758c52c40f6cd9972834a42d2bd0af03 250 SUPERFAMILY SSF52402 2 242 3.42E-79 T 12-10-2018 vfu_B01460 758c52c40f6cd9972834a42d2bd0af03 250 SMART SM00893 23 211 9.6E-63 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 vfu_B01460 758c52c40f6cd9972834a42d2bd0af03 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 vfu_B01460 758c52c40f6cd9972834a42d2bd0af03 250 Gene3D G3DSA:3.40.50.620 1 248 3.4E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B01460 758c52c40f6cd9972834a42d2bd0af03 250 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.7E-45 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 vfu_B01460 758c52c40f6cd9972834a42d2bd0af03 250 PIRSF PIRSF000090 1 249 1.0E-79 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 vfu_A02848 8fa891ae69be5925d03e58582b992083 356 PIRSF PIRSF005096 6 352 2.1E-115 T 12-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 vfu_A02848 8fa891ae69be5925d03e58582b992083 356 Gene3D G3DSA:2.70.98.10 12 354 1.4E-110 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 vfu_A02848 8fa891ae69be5925d03e58582b992083 356 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 18 350 3.3E-139 T 12-10-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 vfu_A02848 8fa891ae69be5925d03e58582b992083 356 Pfam PF01263 Aldose 1-epimerase 22 348 9.6E-86 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 vfu_A02848 8fa891ae69be5925d03e58582b992083 356 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 12-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 vfu_A02848 8fa891ae69be5925d03e58582b992083 356 SUPERFAMILY SSF74650 9 349 2.57E-106 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 vfu_A01911 e371be1250b8000f400d524069df8711 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 430 6.2E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01911 e371be1250b8000f400d524069df8711 579 SMART SM00387 320 431 4.9E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01911 e371be1250b8000f400d524069df8711 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.2E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01911 e371be1250b8000f400d524069df8711 579 Pfam PF00072 Response regulator receiver domain 459 566 6.6E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01911 e371be1250b8000f400d524069df8711 579 Gene3D G3DSA:1.10.287.130 174 271 5.7E-25 T 12-10-2018 vfu_A01911 e371be1250b8000f400d524069df8711 579 SUPERFAMILY SSF52172 457 574 5.69E-37 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01911 e371be1250b8000f400d524069df8711 579 SMART SM00388 209 273 4.8E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01911 e371be1250b8000f400d524069df8711 579 Gene3D G3DSA:3.30.565.10 272 435 1.4E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01911 e371be1250b8000f400d524069df8711 579 Gene3D G3DSA:3.40.50.2300 441 573 2.1E-40 T 12-10-2018 vfu_A01911 e371be1250b8000f400d524069df8711 579 SUPERFAMILY SSF47384 194 274 1.12E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01911 e371be1250b8000f400d524069df8711 579 SUPERFAMILY SSF55874 262 431 3.8E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01911 e371be1250b8000f400d524069df8711 579 SMART SM00448 457 569 5.3E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01911 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 3.6E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01911 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 3.6E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01911 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 3.6E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01911 e371be1250b8000f400d524069df8711 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 3.6E-20 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 Pfam PF14559 Tetratricopeptide repeat 182 238 1.4E-5 T 12-10-2018 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 272 305 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 172 205 40.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 306 339 260.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 SMART SM00028 206 239 260.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 SUPERFAMILY SSF48452 172 333 1.37E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A03113 2c309f39be2c9cb47a7a0f5abbcd9396 363 Gene3D G3DSA:1.25.40.10 120 358 3.3E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 1.3E-13 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 Gene3D G3DSA:1.20.970.10 11 183 1.8E-122 T 12-10-2018 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.661 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 321 1.2E-105 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 330 2.8E-128 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 SUPERFAMILY SSF52418 70 330 1.07E-94 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 SUPERFAMILY SSF47648 1 67 6.67E-17 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02220 ca3d9705798c4c488ccec2762f78f17d 332 Gene3D G3DSA:3.40.1030.10 67 321 1.8E-122 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A01803 06b6300e3e262c1260d48900df704dfa 324 SUPERFAMILY SSF53822 23 323 2.9E-78 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A01803 06b6300e3e262c1260d48900df704dfa 324 Gene3D G3DSA:3.40.50.2300 26 298 5.3E-113 T 12-10-2018 vfu_A01803 06b6300e3e262c1260d48900df704dfa 324 Pfam PF13407 Periplasmic binding protein domain 26 297 1.3E-59 T 12-10-2018 IPR025997 Periplasmic binding protein vfu_A01803 06b6300e3e262c1260d48900df704dfa 324 Gene3D G3DSA:3.40.50.2300 132 276 5.3E-113 T 12-10-2018 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 SUPERFAMILY SSF52141 5 221 8.94E-97 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 Gene3D G3DSA:3.40.470.10 1 225 2.5E-106 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 6.5E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 SMART SM00986 49 210 1.5E-40 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 3.9E-88 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.481 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A02891 f6bcc66f232acaad65b79a087483a44f 225 SMART SM00987 49 210 1.5E-40 T 12-10-2018 vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Pfam PF03882 MukF winged-helix domain 10 122 9.7E-53 T 12-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 SUPERFAMILY SSF46785 13 123 3.94E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 PIRSF PIRSF018282 1 445 6.7E-245 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 SUPERFAMILY SSF140570 124 286 7.06E-78 T 12-10-2018 IPR036141 MukF, middle domain superfamily vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 53.937 T 12-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Gene3D G3DSA:1.10.10.10 29 123 2.0E-44 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Pfam PF17192 MukF middle domain 126 286 5.8E-80 T 12-10-2018 IPR033440 Chromosome partition protein MukF, middle domain vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Gene3D G3DSA:1.10.225.40 358 445 6.3E-38 T 12-10-2018 IPR038198 MukF, C-terminal domain superfamily vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Pfam PF17193 MukF C-terminal domain 288 445 2.0E-77 T 12-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain vfu_A01627 c5e5184e9c4b976d31e6ac74a22a2a7a 445 Gene3D G3DSA:1.20.58.590 124 316 2.1E-79 T 12-10-2018 IPR036141 MukF, middle domain superfamily vfu_A02717 4bcb1c27bae87bd7eac73efac330a123 189 SUPERFAMILY SSF53927 9 161 2.17E-55 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A02717 4bcb1c27bae87bd7eac73efac330a123 189 Gene3D G3DSA:3.40.140.10 7 171 3.6E-64 T 12-10-2018 vfu_A02717 4bcb1c27bae87bd7eac73efac330a123 189 Pfam PF14437 MafB19-like deaminase 12 157 1.2E-32 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 vfu_A02717 4bcb1c27bae87bd7eac73efac330a123 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 61 98 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 vfu_A02717 4bcb1c27bae87bd7eac73efac330a123 189 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 16 157 45.386 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 vfu_A00953 756f1d451110835cda263297406aa440 136 Pfam PF03603 DNA polymerase III psi subunit 3 130 5.7E-35 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00953 756f1d451110835cda263297406aa440 136 PIRSF PIRSF029225 2 134 7.9E-37 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00953 756f1d451110835cda263297406aa440 136 Gene3D G3DSA:3.40.50.10220 35 135 1.7E-27 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00953 756f1d451110835cda263297406aa440 136 SUPERFAMILY SSF102220 33 133 2.09E-24 T 12-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A00953 756f1d451110835cda263297406aa440 136 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 37 128 7.0E-4 T 12-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 TIGRFAM TIGR00277 HDIG: HDIG domain 197 287 3.9E-8 T 12-10-2018 IPR006675 HDIG domain vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 SUPERFAMILY SSF109604 1 142 1.01E-5 T 12-10-2018 vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 Gene3D G3DSA:1.10.3210.10 177 369 2.9E-50 T 12-10-2018 vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 SUPERFAMILY SSF109604 188 357 1.2E-33 T 12-10-2018 vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 Pfam PF01966 HD domain 197 318 6.7E-19 T 12-10-2018 IPR006674 HD domain vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 SMART SM00471 193 328 3.4E-7 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B01022 166b0a69ee182e5f1133bcb148159e05 378 Gene3D G3DSA:1.10.3210.10 1 147 5.5E-8 T 12-10-2018 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 SUPERFAMILY SSF46785 12 93 3.55E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 74 2.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 Gene3D G3DSA:3.40.190.10 99 300 6.9E-65 T 12-10-2018 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 Pfam PF03466 LysR substrate binding domain 104 304 8.4E-24 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 Gene3D G3DSA:1.10.10.10 8 96 6.4E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 2.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 2.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 2.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 SUPERFAMILY SSF53850 97 303 1.38E-39 T 12-10-2018 vfu_A00294 8e258ef68dcbb096f3eb587383fe0b7d 323 Gene3D G3DSA:3.40.190.10 177 276 6.9E-65 T 12-10-2018 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 SMART SM00421 140 197 1.2E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 SUPERFAMILY SSF46894 128 199 3.74E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 1.1E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 2.8E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 2.8E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 2.8E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 Gene3D G3DSA:1.10.10.10 134 201 3.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00730 38077be902fac138f5aaa2d0a4a223ff 207 Gene3D G3DSA:3.40.50.2300 1 132 1.9E-36 T 12-10-2018 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 Pfam PF01048 Phosphorylase superfamily 24 269 6.7E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 Gene3D G3DSA:3.40.50.1580 1 272 5.0E-101 T 12-10-2018 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 PIRSF PIRSF000477 1 272 2.8E-104 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 SUPERFAMILY SSF53167 11 271 1.03E-80 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 75 116 - T 12-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 269 1.9E-98 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 vfu_B01202 90d575f342024c31a384a60ba6a4a738 275 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 22 270 1.4E-122 T 12-10-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 SUPERFAMILY SSF55874 311 471 2.49E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 471 4.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 SUPERFAMILY SSF47384 239 320 4.12E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 8.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 470 8.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 8.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 8.7E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 Gene3D G3DSA:3.30.565.10 325 471 2.4E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 SMART SM00388 256 321 4.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 Pfam PF08521 Two-component sensor kinase N-terminal 25 179 3.0E-7 T 12-10-2018 IPR013727 Two-component sensor kinase, N-terminal vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 SMART SM00387 364 472 1.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 320 4.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00653 b7fc13034d2ebc11868ecee0134a49e8 472 Gene3D G3DSA:1.10.287.130 207 321 1.9E-20 T 12-10-2018 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 1.3E-75 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 Gene3D G3DSA:3.30.1360.60 394 475 4.7E-30 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.5E-200 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 Pfam PF00367 phosphotransferase system, EIIB 402 434 2.9E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 SUPERFAMILY SSF55604 399 472 1.44E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A01319 9157a332db598209f07da5c3c39b7ed6 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 3.0E-21 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 vfu_A02197 b9aa88c0ece798fe5a7efc1a303b1aac 133 SUPERFAMILY SSF55021 70 130 5.6E-20 T 12-10-2018 vfu_A02197 b9aa88c0ece798fe5a7efc1a303b1aac 133 SUPERFAMILY SSF55021 3 66 1.65E-15 T 12-10-2018 vfu_A02197 b9aa88c0ece798fe5a7efc1a303b1aac 133 Pfam PF13840 ACT domain 72 127 8.9E-13 T 12-10-2018 IPR027795 CASTOR, ACT domain vfu_A02197 b9aa88c0ece798fe5a7efc1a303b1aac 133 Gene3D G3DSA:3.30.2130.10 1 132 6.2E-44 T 12-10-2018 vfu_A02197 b9aa88c0ece798fe5a7efc1a303b1aac 133 Pfam PF10000 ACT domain 2 70 6.0E-23 T 12-10-2018 IPR018717 Domain of unknown function DUF2241 vfu_A01885 9e0b83be3fa9de73fb130d0d486436c1 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 2.2E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A01885 9e0b83be3fa9de73fb130d0d486436c1 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A01885 9e0b83be3fa9de73fb130d0d486436c1 202 SUPERFAMILY SSF54862 1 183 1.05E-47 T 12-10-2018 vfu_A01885 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 5 180 4.7E-34 T 12-10-2018 vfu_A01885 9e0b83be3fa9de73fb130d0d486436c1 202 Gene3D G3DSA:3.30.70.20 63 120 4.7E-34 T 12-10-2018 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.9E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.9E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.9E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.9E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.9E-46 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 Gene3D G3DSA:3.40.50.720 4 326 1.0E-156 T 12-10-2018 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 SUPERFAMILY SSF55347 149 312 6.85E-81 T 12-10-2018 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.8E-71 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 SMART SM00846 3 150 1.6E-96 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 Gene3D G3DSA:3.30.360.10 149 314 1.0E-156 T 12-10-2018 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 PIRSF PIRSF000149 1 331 3.7E-137 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.9E-137 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 SUPERFAMILY SSF51735 3 166 1.49E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02488 fa18d6cc5f041f401e2aec4257c69994 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.9E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 SUPERFAMILY SSF47831 24 143 2.48E-32 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.1E-247 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 5.8E-32 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 1.1E-20 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 Gene3D G3DSA:3.50.30.10 4 233 3.2E-80 T 12-10-2018 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 Gene3D G3DSA:1.10.274.10 21 146 3.2E-80 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 SUPERFAMILY SSF51621 249 549 1.1E-109 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 PIRSF PIRSF000732 1 573 4.1E-218 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 Gene3D G3DSA:3.20.20.60 234 573 2.5E-124 T 12-10-2018 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 4.8E-123 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 SUPERFAMILY SSF52009 125 243 1.96E-34 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 12-10-2018 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 12-10-2018 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 12-10-2018 vfu_A02637 f76fac36a24b2a9cc73ac4832cd7e308 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 12-10-2018 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 SUPERFAMILY SSF51726 5 393 2.09E-107 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 PIRSF PIRSF000382 2 763 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.732 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 SUPERFAMILY SSF51726 396 757 3.01E-113 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 2.7E-149 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_A02230 276e0abbf7afb5d112d69754515e0add 764 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 315 9.0E-118 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 Gene3D G3DSA:2.40.50.530 1 64 1.1E-16 T 12-10-2018 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 SUPERFAMILY SSF143034 2 63 6.02E-19 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.701 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.6E-17 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.6E-17 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.6E-17 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 Pfam PF01632 Ribosomal protein L35 2 61 5.1E-19 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B00043 7d047431271f6c6afc1bbc6cdbf3c2e7 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 4.8E-24 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 SUPERFAMILY SSF52172 13 191 6.4E-40 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 SMART SM00448 11 122 1.3E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 SUPERFAMILY SSF52540 147 389 8.19E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 SMART SM00382 167 310 4.7E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:3.40.50.300 138 318 3.9E-64 T 12-10-2018 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 SUPERFAMILY SSF46689 406 459 3.55E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Pfam PF00158 Sigma-54 interaction domain 148 313 4.2E-68 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:1.10.10.60 412 456 1.0E-9 T 12-10-2018 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:1.10.8.60 319 398 6.8E-22 T 12-10-2018 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Pfam PF00072 Response regulator receiver domain 14 122 3.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 4.0E-12 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A02581 3bc633c54655b6086ba525645bf7a5d8 467 Gene3D G3DSA:3.40.50.2300 4 137 1.1E-32 T 12-10-2018 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 SUPERFAMILY SSF46689 226 276 9.41E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 Gene3D G3DSA:1.10.10.60 172 276 1.6E-26 T 12-10-2018 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 1.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 1.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 SMART SM00342 190 273 8.4E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 Pfam PF12833 Helix-turn-helix domain 197 274 7.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 269 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 SUPERFAMILY SSF51215 19 144 6.67E-9 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_B00541 922c798f4e3e9db59fdadd5c2232766e 282 Gene3D G3DSA:2.60.120.280 31 142 3.6E-7 T 12-10-2018 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 Gene3D G3DSA:2.30.30.30 115 195 7.1E-32 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 3.1E-130 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 6.3E-56 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 Gene3D G3DSA:2.40.50.140 1 114 2.3E-50 T 12-10-2018 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 SMART SM01383 42 118 3.0E-47 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 SUPERFAMILY SSF50104 127 272 2.41E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 SUPERFAMILY SSF50249 2 125 1.13E-49 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 PIRSF PIRSF002158 13 274 3.0E-100 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 SMART SM01382 124 252 3.5E-91 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.963 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.3E-34 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00670 fdc5354e4f4e1e27839333c3d167d966 274 Gene3D G3DSA:4.10.950.10 196 274 1.0E-36 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 ProSitePatterns PS00080 Multicopper oxidases signature 2. 442 453 - T 12-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 SUPERFAMILY SSF49503 158 280 1.8E-21 T 12-10-2018 IPR008972 Cupredoxin vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF07731 Multicopper oxidase 366 456 5.9E-25 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 SUPERFAMILY SSF49503 33 155 2.39E-39 T 12-10-2018 IPR008972 Cupredoxin vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 2 25 2.1E-6 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 SUPERFAMILY SSF49503 312 459 3.36E-34 T 12-10-2018 IPR008972 Cupredoxin vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Gene3D G3DSA:2.60.40.420 24 153 4.3E-43 T 12-10-2018 IPR008972 Cupredoxin vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF07732 Multicopper oxidase 48 156 5.0E-38 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Gene3D G3DSA:2.60.40.420 160 291 1.1E-24 T 12-10-2018 IPR008972 Cupredoxin vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Pfam PF00394 Multicopper oxidase 164 275 8.6E-8 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 vfu_A00366 8e2207375ea39d8f4d70c4028f82c745 460 Gene3D G3DSA:2.60.40.420 308 460 3.1E-36 T 12-10-2018 IPR008972 Cupredoxin vfu_B01221 50a3d15c46d0a34fb41971d5c853aa8f 428 Gene3D G3DSA:3.40.190.10 29 372 5.3E-135 T 12-10-2018 vfu_B01221 50a3d15c46d0a34fb41971d5c853aa8f 428 SUPERFAMILY SSF53850 25 422 2.64E-59 T 12-10-2018 vfu_B01221 50a3d15c46d0a34fb41971d5c853aa8f 428 Gene3D G3DSA:3.40.190.10 138 414 5.3E-135 T 12-10-2018 vfu_B01221 50a3d15c46d0a34fb41971d5c853aa8f 428 Pfam PF13416 Bacterial extracellular solute-binding protein 46 339 1.9E-24 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 Gene3D G3DSA:1.20.81.30 63 176 6.0E-30 T 12-10-2018 vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 4.7E-9 T 12-10-2018 IPR003004 GspF/PilC family vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 4.7E-9 T 12-10-2018 IPR003004 GspF/PilC family vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 4.7E-9 T 12-10-2018 IPR003004 GspF/PilC family vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 4.7E-9 T 12-10-2018 IPR003004 GspF/PilC family vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 1.6E-27 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 3.3E-28 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A03111 ed4128c90b0a12c0c8a0ff4294d77cbf 407 Gene3D G3DSA:1.20.81.30 257 370 1.2E-29 T 12-10-2018 vfu_A00548 f589f4d7cc06fa4c2604ad28caf4a0c4 221 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.569 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 vfu_A00548 f589f4d7cc06fa4c2604ad28caf4a0c4 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 2.6E-37 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 vfu_A00548 f589f4d7cc06fa4c2604ad28caf4a0c4 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 14 204 6.5E-60 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 Gene3D G3DSA:3.40.50.300 21 203 5.1E-50 T 12-10-2018 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 Hamap MF_00367 GTPase Era [era]. 25 317 35.206 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 Pfam PF07650 KH domain 228 305 3.7E-19 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 SUPERFAMILY SSF52540 30 225 1.97E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 Pfam PF01926 50S ribosome-binding GTPase 30 144 6.8E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 Gene3D G3DSA:3.30.300.20 205 319 6.3E-42 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 SUPERFAMILY SSF54814 201 317 8.5E-40 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 27 188 9.4E-38 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00837 97747558ff0262d7d17366035a2ea1e3 321 TIGRFAM TIGR00436 era: GTP-binding protein Era 28 300 3.6E-109 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 SUPERFAMILY SSF56784 1 214 2.61E-50 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B01160 e06d80196716a82722a02b604fbc2043 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 183 5.2E-14 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 130 146 3.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 99 112 3.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 168 3.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.3E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 Gene3D G3DSA:3.40.50.1000 4 189 1.4E-50 T 12-10-2018 IPR023214 HAD superfamily vfu_B01160 e06d80196716a82722a02b604fbc2043 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.3E-30 T 12-10-2018 vfu_B01160 e06d80196716a82722a02b604fbc2043 218 Gene3D G3DSA:1.10.150.240 16 86 1.4E-50 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_A02465 515c9767185b60879108076ce8347932 315 SUPERFAMILY SSF53850 91 299 8.69E-49 T 12-10-2018 vfu_A02465 515c9767185b60879108076ce8347932 315 Gene3D G3DSA:3.40.190.10 165 267 4.2E-60 T 12-10-2018 vfu_A02465 515c9767185b60879108076ce8347932 315 SUPERFAMILY SSF46785 7 114 6.19E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02465 515c9767185b60879108076ce8347932 315 Pfam PF03466 LysR substrate binding domain 90 295 9.7E-47 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02465 515c9767185b60879108076ce8347932 315 Gene3D G3DSA:1.10.10.10 5 91 3.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02465 515c9767185b60879108076ce8347932 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.2E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02465 515c9767185b60879108076ce8347932 315 Gene3D G3DSA:3.40.190.10 93 293 4.2E-60 T 12-10-2018 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:3.30.1360.40 240 333 6.1E-180 T 12-10-2018 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:3.90.199.10 34 483 6.1E-180 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 12-10-2018 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:2.120.10.90 502 739 1.6E-14 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 SUPERFAMILY SSF101904 499 743 9.02E-51 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.924 T 12-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 SMART SM00434 13 463 3.7E-234 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 7.4E-137 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 641 0.0058 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 9.4E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 Gene3D G3DSA:1.10.268.10 371 456 6.1E-180 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 vfu_A00865 019ee73ffa633c743e90fc4ba5099682 757 SUPERFAMILY SSF56719 33 485 4.32E-156 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 vfu_B01402 272033b0f1f6982f04da679717cc4a7a 551 Pfam PF07728 AAA domain (dynein-related subfamily) 49 179 1.0E-22 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 vfu_B01402 272033b0f1f6982f04da679717cc4a7a 551 Gene3D G3DSA:1.10.8.300 229 299 6.8E-27 T 12-10-2018 vfu_B01402 272033b0f1f6982f04da679717cc4a7a 551 SUPERFAMILY SSF52540 18 314 7.96E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01402 272033b0f1f6982f04da679717cc4a7a 551 SMART SM00382 46 169 1.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01402 272033b0f1f6982f04da679717cc4a7a 551 Gene3D G3DSA:3.40.50.300 8 228 6.9E-59 T 12-10-2018 vfu_B01402 272033b0f1f6982f04da679717cc4a7a 551 Pfam PF12592 Protein of unknown function (DUF3763) 481 533 1.1E-20 T 12-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 SUPERFAMILY SSF51730 190 531 1.8E-115 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 Pfam PF01619 Proline dehydrogenase 197 490 5.5E-95 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 Gene3D G3DSA:3.40.605.10 548 1037 5.3E-149 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 Gene3D G3DSA:3.40.309.10 814 1006 5.3E-149 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.4E-44 T 12-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 Pfam PF00171 Aldehyde dehydrogenase family 587 1037 4.7E-118 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1038 1.1E-251 T 12-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 SUPERFAMILY SSF81935 17 189 9.42E-62 T 12-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 PIRSF PIRSF000197 3 1039 0.0 T 12-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 Gene3D G3DSA:3.20.20.220 150 525 1.4E-133 T 12-10-2018 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_B00967 4f024bd7e77b4d91b9a0c1edd6e4023c 1039 SUPERFAMILY SSF53720 579 1038 1.02E-127 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 SUPERFAMILY SSF51182 61 197 2.82E-7 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01437 af60c467f7ea42066e56058319f1d688 291 Pfam PF12833 Helix-turn-helix domain 208 285 2.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 SUPERFAMILY SSF46689 185 237 7.88E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 Gene3D G3DSA:2.60.120.10 20 117 6.3E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01437 af60c467f7ea42066e56058319f1d688 291 SMART SM00342 202 284 1.6E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 280 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 Gene3D G3DSA:1.10.10.60 184 290 1.2E-20 T 12-10-2018 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 Pfam PF02311 AraC-like ligand binding domain 52 125 9.8E-5 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B01437 af60c467f7ea42066e56058319f1d688 291 SUPERFAMILY SSF46689 238 286 1.21E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A03039 3e1ec938897782cf68709b63011e11e5 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 23 81 9.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A03039 3e1ec938897782cf68709b63011e11e5 316 SUPERFAMILY SSF53850 107 313 1.99E-27 T 12-10-2018 vfu_A03039 3e1ec938897782cf68709b63011e11e5 316 Pfam PF03466 LysR substrate binding domain 107 310 6.3E-26 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A03039 3e1ec938897782cf68709b63011e11e5 316 SUPERFAMILY SSF46785 12 130 2.37E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A03039 3e1ec938897782cf68709b63011e11e5 316 Gene3D G3DSA:1.10.10.10 20 109 8.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A03039 3e1ec938897782cf68709b63011e11e5 316 Gene3D G3DSA:3.40.190.290 110 310 5.7E-37 T 12-10-2018 vfu_A00517 8359d2d30656f054772a44f5353e9769 215 Pfam PF11612 Type II secretion system (T2SS), protein J 65 202 2.8E-38 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 vfu_A00517 8359d2d30656f054772a44f5353e9769 215 Gene3D G3DSA:3.10.610.10 37 157 2.1E-34 T 12-10-2018 vfu_A00517 8359d2d30656f054772a44f5353e9769 215 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 1.8E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00517 8359d2d30656f054772a44f5353e9769 215 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 35 5.3E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00517 8359d2d30656f054772a44f5353e9769 215 SUPERFAMILY SSF54523 48 209 4.76E-55 T 12-10-2018 vfu_A00517 8359d2d30656f054772a44f5353e9769 215 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00517 8359d2d30656f054772a44f5353e9769 215 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 13 204 3.5E-84 T 12-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 vfu_A00517 8359d2d30656f054772a44f5353e9769 215 Gene3D G3DSA:2.10.70.20 159 208 3.5E-18 T 12-10-2018 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 SUPERFAMILY SSF50341 11 153 1.83E-30 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 SMART SM00448 174 291 4.0E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 PIRSF PIRSF002867 1 299 1.6E-88 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 Pfam PF00072 Response regulator receiver domain 176 290 2.2E-15 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 SMART SM00260 11 148 5.4E-17 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 SUPERFAMILY SSF52172 172 295 2.99E-22 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 Pfam PF01584 CheW-like domain 14 150 1.3E-29 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 Gene3D G3DSA:2.40.50.180 32 147 5.9E-24 T 12-10-2018 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 Gene3D G3DSA:2.30.30.40 18 142 5.9E-24 T 12-10-2018 vfu_B00759 54bc81cefbb2c9ce261bdd2f990fb87e 307 Gene3D G3DSA:3.40.50.2300 164 303 5.0E-24 T 12-10-2018 vfu_A00148 e2172155b6a3f83388ac2eab881aff1f 364 SUPERFAMILY SSF53756 23 362 8.57E-68 T 12-10-2018 vfu_A00148 e2172155b6a3f83388ac2eab881aff1f 364 Gene3D G3DSA:3.40.50.2000 164 344 1.1E-61 T 12-10-2018 vfu_A00148 e2172155b6a3f83388ac2eab881aff1f 364 Gene3D G3DSA:3.40.50.2000 25 354 1.1E-61 T 12-10-2018 vfu_A00148 e2172155b6a3f83388ac2eab881aff1f 364 Pfam PF13439 Glycosyltransferase Family 4 25 167 1.7E-12 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 vfu_A00148 e2172155b6a3f83388ac2eab881aff1f 364 Pfam PF00534 Glycosyl transferases group 1 179 339 3.5E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_A02910 7cd2c57de8bd65a95ecc616e6d6260ec 121 Pfam PF07386 Protein of unknown function (DUF1499) 8 112 2.4E-21 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 vfu_A02910 7cd2c57de8bd65a95ecc616e6d6260ec 121 PIRSF PIRSF026426 1 119 2.2E-41 T 12-10-2018 IPR010865 Protein of unknown function DUF1499 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.9E-8 T 12-10-2018 IPR001943 UVR domain GO:0005515 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 416 597 2.4E-49 T 12-10-2018 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF04851 Type III restriction enzyme, res subunit 13 92 1.1E-8 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 1 236 4.1E-73 T 12-10-2018 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF52540 37 581 6.61E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 SMART SM00487 9 427 5.6E-28 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF46600 625 672 1.83E-11 T 12-10-2018 IPR036876 UVR domain superfamily vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:3.40.50.300 268 415 3.1E-51 T 12-10-2018 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 SMART SM00490 461 547 7.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Gene3D G3DSA:4.10.860.10 619 676 8.1E-19 T 12-10-2018 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 5.4E-17 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.022 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 3.1E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain vfu_A02582 a8d07ff1e06cb5f495d3f0bebb643731 676 SUPERFAMILY SSF52540 3 416 1.67E-136 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SMART SM00448 4 114 2.0E-37 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Gene3D G3DSA:1.10.10.10 125 236 2.4E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SUPERFAMILY SSF52172 2 128 4.13E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SMART SM00862 156 232 2.4E-14 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Gene3D G3DSA:3.40.50.2300 1 124 6.0E-33 T 12-10-2018 vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.8E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 SUPERFAMILY SSF46894 137 233 3.4E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02901 642f5f7dcceaa7a01c5dc6d10e7f05f3 238 Pfam PF00072 Response regulator receiver domain 6 113 4.9E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 Pfam PF12161 HsdM N-terminal domain 11 160 3.8E-20 T 12-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 Gene3D G3DSA:1.20.1260.30 1 130 4.4E-5 T 12-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 195 211 3.4E-10 T 12-10-2018 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 300 312 3.4E-10 T 12-10-2018 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 3.4E-10 T 12-10-2018 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 Pfam PF02384 N-6 DNA Methylase 175 485 4.9E-53 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 Gene3D G3DSA:3.40.50.150 174 497 3.3E-87 T 12-10-2018 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A02741 8ef905c704705a2c4f1d06bc9f5ea561 789 SUPERFAMILY SSF53335 8 529 6.73E-113 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01908 5ca73eb956fbef9ee8c13fe8f3f95410 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 2.2E-114 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01908 5ca73eb956fbef9ee8c13fe8f3f95410 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 6.0E-231 T 12-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 vfu_A01908 5ca73eb956fbef9ee8c13fe8f3f95410 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01908 5ca73eb956fbef9ee8c13fe8f3f95410 475 SUPERFAMILY SSF81442 11 466 9.16E-122 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01908 5ca73eb956fbef9ee8c13fe8f3f95410 475 Gene3D G3DSA:1.20.210.10 4 473 3.0E-204 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 Gene3D G3DSA:3.40.1350.30 135 271 2.8E-116 T 12-10-2018 vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 Pfam PF01938 TRAM domain 17 68 2.6E-10 T 12-10-2018 IPR002792 TRAM domain vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 434 1.1E-124 T 12-10-2018 vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 373 403 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 SUPERFAMILY SSF50249 18 74 1.66E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 424 434 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 442 66.832 T 12-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 Gene3D G3DSA:2.40.50.140 1 88 2.1E-32 T 12-10-2018 vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 SUPERFAMILY SSF53335 77 441 7.71E-83 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 439 2.8E-27 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 vfu_A00842 aaade5ea46735e9bf713069567ed2b17 443 Gene3D G3DSA:3.40.50.150 89 436 2.8E-116 T 12-10-2018 vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 8 445 3.6E-214 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 Gene3D G3DSA:3.40.1160.10 7 296 2.4E-86 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 Pfam PF00583 Acetyltransferase (GNAT) family 334 416 6.6E-8 T 12-10-2018 IPR000182 GNAT domain vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 SUPERFAMILY SSF53633 4 294 1.83E-69 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 Pfam PF00696 Amino acid kinase family 25 270 6.7E-30 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 445 224.452 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 PIRSF PIRSF000423 1 445 9.3E-205 T 12-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 SUPERFAMILY SSF55729 254 422 3.04E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A02831 7c6b5588a5d7e43ba124e988990a9be0 445 Gene3D G3DSA:3.40.630.30 297 445 6.7E-39 T 12-10-2018 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 SMART SM00342 170 252 1.7E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 Pfam PF12833 Helix-turn-helix domain 176 253 4.4E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 SUPERFAMILY SSF46689 207 256 8.06E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 Gene3D G3DSA:2.60.120.10 3 90 1.9E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 221 236 8.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 252 8.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 Gene3D G3DSA:1.10.10.60 151 255 3.0E-21 T 12-10-2018 vfu_B00738 02e53168e35b92fa9c7e9c301c45b27d 280 SUPERFAMILY SSF51182 18 179 2.1E-11 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A02862 fd6514c66b171ec4b7727fb1eac835f2 249 SMART SM00858 44 106 5.4E-8 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_A02862 fd6514c66b171ec4b7727fb1eac835f2 249 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 223 1.0E-71 T 12-10-2018 IPR017592 Pilus assembly, Flp-type CpaB vfu_A02862 fd6514c66b171ec4b7727fb1eac835f2 249 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 113 215 1.5E-28 T 12-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain vfu_A02862 fd6514c66b171ec4b7727fb1eac835f2 249 Pfam PF08666 SAF domain 45 105 2.5E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_A02306 64a9aebd669ea363f62835e937814ec3 547 Gene3D G3DSA:3.90.1150.170 50 523 4.6E-110 T 12-10-2018 vfu_A02306 64a9aebd669ea363f62835e937814ec3 547 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 442 1.1E-54 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 vfu_A02306 64a9aebd669ea363f62835e937814ec3 547 SUPERFAMILY SSF53383 25 528 4.97E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02306 64a9aebd669ea363f62835e937814ec3 547 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 6 527 6.0E-295 T 12-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 vfu_A02306 64a9aebd669ea363f62835e937814ec3 547 Gene3D G3DSA:3.40.640.10 122 387 4.6E-110 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A00018 97c85430d1866367aba54b152e637177 528 SUPERFAMILY SSF54106 483 526 2.88E-10 T 12-10-2018 vfu_A00018 97c85430d1866367aba54b152e637177 528 Pfam PF01476 LysM domain 431 473 1.7E-11 T 12-10-2018 IPR018392 LysM domain vfu_A00018 97c85430d1866367aba54b152e637177 528 Pfam PF01476 LysM domain 366 408 4.0E-12 T 12-10-2018 IPR018392 LysM domain vfu_A00018 97c85430d1866367aba54b152e637177 528 Pfam PF01476 LysM domain 484 526 2.7E-13 T 12-10-2018 IPR018392 LysM domain vfu_A00018 97c85430d1866367aba54b152e637177 528 Gene3D G3DSA:2.60.40.3500 1 93 1.7E-18 T 12-10-2018 vfu_A00018 97c85430d1866367aba54b152e637177 528 Gene3D G3DSA:3.10.350.10 357 413 1.4E-14 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A00018 97c85430d1866367aba54b152e637177 528 Gene3D G3DSA:3.10.350.10 419 478 1.6E-15 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A00018 97c85430d1866367aba54b152e637177 528 Gene3D G3DSA:3.10.350.10 479 528 1.7E-15 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A00018 97c85430d1866367aba54b152e637177 528 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 125 343 2.5E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 vfu_A00018 97c85430d1866367aba54b152e637177 528 SMART SM00646 185 344 1.3E-67 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 vfu_A00018 97c85430d1866367aba54b152e637177 528 SUPERFAMILY SSF54106 429 473 1.96E-9 T 12-10-2018 vfu_A00018 97c85430d1866367aba54b152e637177 528 SUPERFAMILY SSF53187 123 347 2.32E-52 T 12-10-2018 vfu_A00018 97c85430d1866367aba54b152e637177 528 SUPERFAMILY SSF54106 365 408 1.83E-10 T 12-10-2018 vfu_A00018 97c85430d1866367aba54b152e637177 528 Gene3D G3DSA:3.40.630.40 113 353 1.1E-69 T 12-10-2018 vfu_A00018 97c85430d1866367aba54b152e637177 528 Pfam PF11741 AMIN domain 1 91 7.8E-13 T 12-10-2018 IPR021731 AMIN domain vfu_A00018 97c85430d1866367aba54b152e637177 528 SMART SM00257 365 408 1.3E-14 T 12-10-2018 IPR018392 LysM domain vfu_A00018 97c85430d1866367aba54b152e637177 528 SMART SM00257 483 526 8.4E-15 T 12-10-2018 IPR018392 LysM domain vfu_A00018 97c85430d1866367aba54b152e637177 528 SMART SM00257 430 473 3.6E-12 T 12-10-2018 IPR018392 LysM domain vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:3.40.50.980 188 361 1.3E-53 T 12-10-2018 vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:2.30.38.10 362 437 1.1E-27 T 12-10-2018 vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:3.40.50.980 26 181 1.0E-39 T 12-10-2018 vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 8 535 1.8E-252 T 12-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 Gene3D G3DSA:3.30.300.310 439 539 9.8E-29 T 12-10-2018 vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 528 2.1E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 Pfam PF00501 AMP-binding enzyme 39 443 1.2E-77 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A01468 7e6c229df8481105de52d5b682a71e60 539 SUPERFAMILY SSF56801 8 538 1.31E-133 T 12-10-2018 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 12-10-2018 IPR019844 Cold-shock conserved site vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 3.5E-43 T 12-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 PRINTS PR00050 Cold shock protein signature 4 19 4.8E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 PRINTS PR00050 Cold shock protein signature 25 34 4.8E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 PRINTS PR00050 Cold shock protein signature 40 58 4.8E-15 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 6.5E-28 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 PIRSF PIRSF002599 1 73 5.0E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 SUPERFAMILY SSF50249 1 67 1.29E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 Gene3D G3DSA:2.40.50.140 1 65 2.2E-26 T 12-10-2018 vfu_A01604 9523e9d15e78ae5db653779ec36f7aa6 73 SMART SM00357 3 67 1.9E-26 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_B00587 4a6592e55cba19c556e804060dd1c9a3 294 SMART SM00729 15 232 5.1E-21 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_B00587 4a6592e55cba19c556e804060dd1c9a3 294 Gene3D G3DSA:3.80.30.20 13 244 2.3E-15 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_B00587 4a6592e55cba19c556e804060dd1c9a3 294 SUPERFAMILY SSF102114 3 239 3.01E-31 T 12-10-2018 vfu_B00587 4a6592e55cba19c556e804060dd1c9a3 294 Pfam PF04055 Radical SAM superfamily 20 173 4.9E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_B01370 17a9680670219e74785c8e73ab1e50f7 158 PIRSF PIRSF003174 1 155 1.9E-49 T 12-10-2018 IPR010292 Uncharacterised protein family CreA vfu_B01370 17a9680670219e74785c8e73ab1e50f7 158 Pfam PF05981 CreA protein 23 145 3.2E-44 T 12-10-2018 IPR010292 Uncharacterised protein family CreA vfu_B01284 ceec141983a000e722b01d58da5686cb 284 Gene3D G3DSA:3.40.50.1980 22 141 1.7E-36 T 12-10-2018 vfu_B01284 ceec141983a000e722b01d58da5686cb 284 Gene3D G3DSA:3.40.50.1980 142 284 4.8E-44 T 12-10-2018 vfu_B01284 ceec141983a000e722b01d58da5686cb 284 Pfam PF01497 Periplasmic binding protein 28 257 1.1E-36 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_B01284 ceec141983a000e722b01d58da5686cb 284 SUPERFAMILY SSF53807 25 283 2.39E-51 T 12-10-2018 vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 3.8E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 TIGRFAM TIGR01707 gspI: type II secretion system protein I 7 104 4.2E-37 T 12-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 Pfam PF02501 Type II secretion system (T2SS), protein I 41 116 4.8E-21 T 12-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 SUPERFAMILY SSF54523 38 116 2.83E-22 T 12-10-2018 vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 8.1E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00516 aee5f0c68a6e8f3a2f0664e8b82bcb79 118 Gene3D G3DSA:3.30.1300.30 31 118 2.1E-33 T 12-10-2018 vfu_A02527 4cd2054063de1386a731bd77705ae227 78 Gene3D G3DSA:3.40.50.10240 1 56 2.7E-6 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 vfu_A02527 4cd2054063de1386a731bd77705ae227 78 SUPERFAMILY SSF63999 4 55 1.83E-8 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 vfu_A02027 982e76fc339ec12493005c09078d928d 118 SUPERFAMILY SSF54593 6 117 4.81E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A02027 982e76fc339ec12493005c09078d928d 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 4.1E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_A02027 982e76fc339ec12493005c09078d928d 118 Gene3D G3DSA:3.10.180.10 1 118 5.1E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 PIRSF PIRSF005572 2 384 9.9E-139 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 Gene3D G3DSA:3.40.640.10 16 262 6.9E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 Gene3D G3DSA:3.90.1150.10 5 375 6.9E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 Pfam PF00266 Aminotransferase class-V 5 368 7.1E-89 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.185 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 SUPERFAMILY SSF53383 5 391 1.34E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02787 ec1fdd1e13a242f9b033138c7e50a8e6 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 8.4E-230 T 12-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 vfu_A02950 235a662d3457648d4d79039fec348193 197 Gene3D G3DSA:2.102.10.10 43 190 1.2E-48 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A02950 235a662d3457648d4d79039fec348193 197 Gene3D G3DSA:1.20.5.510 1 40 1.5E-5 T 12-10-2018 vfu_A02950 235a662d3457648d4d79039fec348193 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 1.2E-11 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 vfu_A02950 235a662d3457648d4d79039fec348193 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 12-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 vfu_A02950 235a662d3457648d4d79039fec348193 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 1.3E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 vfu_A02950 235a662d3457648d4d79039fec348193 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 1.3E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 vfu_A02950 235a662d3457648d4d79039fec348193 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 1.3E-7 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 vfu_A02950 235a662d3457648d4d79039fec348193 197 SUPERFAMILY SSF50022 30 192 2.77E-43 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A02950 235a662d3457648d4d79039fec348193 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 2.2E-76 T 12-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 vfu_A02454 7350e64e4f7d7a26d70fa01c917066c4 237 Gene3D G3DSA:3.40.50.1390 2 128 5.6E-9 T 12-10-2018 vfu_A02454 7350e64e4f7d7a26d70fa01c917066c4 237 Pfam PF00239 Resolvase, N terminal domain 4 131 2.5E-9 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 vfu_A02454 7350e64e4f7d7a26d70fa01c917066c4 237 SUPERFAMILY SSF53041 1 128 3.4E-11 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 vfu_A02454 7350e64e4f7d7a26d70fa01c917066c4 237 Pfam PF13384 Homeodomain-like domain 153 198 5.4E-7 T 12-10-2018 vfu_A02454 7350e64e4f7d7a26d70fa01c917066c4 237 SMART SM00857 3 142 8.2E-5 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 Gene3D G3DSA:3.40.50.2300 1 122 1.4E-37 T 12-10-2018 vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 SUPERFAMILY SSF46894 131 234 1.84E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 233 3.1E-13 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 SMART SM00862 156 233 1.6E-10 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 SUPERFAMILY SSF52172 2 128 1.38E-41 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 Pfam PF00072 Response regulator receiver domain 6 116 1.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 Gene3D G3DSA:1.10.10.10 123 237 2.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02440 a29a927ed548ee88f06e26e0263a59be 241 SMART SM00448 4 115 4.7E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PIRSF PIRSF019574 21 366 7.1E-109 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 Gene3D G3DSA:3.40.190.10 54 333 1.1E-108 T 12-10-2018 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 Gene3D G3DSA:3.40.190.10 154 338 1.1E-108 T 12-10-2018 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 Pfam PF13416 Bacterial extracellular solute-binding protein 65 324 5.6E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 55 71 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 161 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 171 185 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 114 127 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 226 245 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 270 289 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 71 92 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 98 112 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 189 208 2.1E-71 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01891 7138cc4f7be1280137728edc0e924e14 366 SUPERFAMILY SSF53850 49 354 4.66E-86 T 12-10-2018 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 6.1E-204 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 Pfam PF00171 Aldehyde dehydrogenase family 19 476 3.5E-168 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 Gene3D G3DSA:3.40.605.10 19 472 1.8E-179 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 Gene3D G3DSA:3.40.309.10 261 449 1.8E-179 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A02317 bb71b0324021db9aa336959b8548f405 483 SUPERFAMILY SSF53720 5 480 2.75E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A00168 d5e920270acdfa0a845c61c9003a773c 157 Gene3D G3DSA:3.40.140.10 35 157 2.2E-41 T 12-10-2018 vfu_A00168 d5e920270acdfa0a845c61c9003a773c 157 Pfam PF04002 RadC-like JAB domain 38 155 5.0E-43 T 12-10-2018 IPR025657 RadC-like JAB domain vfu_A00168 d5e920270acdfa0a845c61c9003a773c 157 SUPERFAMILY SSF102712 52 126 3.01E-6 T 12-10-2018 vfu_A00168 d5e920270acdfa0a845c61c9003a773c 157 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 157 4.5E-43 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 vfu_A00168 d5e920270acdfa0a845c61c9003a773c 157 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 107 112 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site vfu_B01230 64cce5df31cf5b6b8f2bf9cef06b1d3b 207 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_B01230 64cce5df31cf5b6b8f2bf9cef06b1d3b 207 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 204 7.8E-82 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_B01230 64cce5df31cf5b6b8f2bf9cef06b1d3b 207 Gene3D G3DSA:3.20.20.70 1 206 5.8E-76 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B01230 64cce5df31cf5b6b8f2bf9cef06b1d3b 207 Pfam PF01081 KDPG and KHG aldolase 5 197 2.7E-70 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_B01230 64cce5df31cf5b6b8f2bf9cef06b1d3b 207 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_B01230 64cce5df31cf5b6b8f2bf9cef06b1d3b 207 SUPERFAMILY SSF51569 3 205 2.75E-66 T 12-10-2018 vfu_A02012 5463a5bb8927d2f36a7235b5cbd5b58e 91 SUPERFAMILY SSF54975 2 90 8.29E-26 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02012 5463a5bb8927d2f36a7235b5cbd5b58e 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02012 5463a5bb8927d2f36a7235b5cbd5b58e 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02012 5463a5bb8927d2f36a7235b5cbd5b58e 91 Pfam PF00708 Acylphosphatase 7 90 1.2E-22 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 vfu_A02012 5463a5bb8927d2f36a7235b5cbd5b58e 91 Gene3D G3DSA:3.30.70.100 1 91 2.8E-30 T 12-10-2018 vfu_B00732 3c88030686735c0a45964bcb679d72fe 341 SUPERFAMILY SSF103481 42 146 8.89E-6 T 12-10-2018 vfu_B00732 3c88030686735c0a45964bcb679d72fe 341 TIGRFAM TIGR00688 rarD: protein RarD 10 262 1.8E-48 T 12-10-2018 IPR004626 RarD protein GO:0005887 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:1.10.860.10 439 581 7.8E-58 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 PIRSF PIRSF002811 2 580 7.2E-144 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SUPERFAMILY SSF56731 122 429 6.28E-113 T 12-10-2018 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF10410 DnaB-helicase binding domain of primase 376 427 5.4E-11 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SMART SM00493 265 336 1.1E-19 T 12-10-2018 IPR006171 TOPRIM domain vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 3.2E-42 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:3.90.980.10 121 246 5.8E-45 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SUPERFAMILY SSF57783 4 101 6.97E-37 T 12-10-2018 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 3.2E-35 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:3.90.580.10 1 102 7.1E-39 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF13155 Toprim-like 269 355 9.7E-14 T 12-10-2018 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SMART SM00400 36 90 2.0E-36 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Hamap MF_00974 DNA primase [dnaG]. 4 577 29.378 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SMART SM00766 451 576 5.5E-55 T 12-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Pfam PF01807 CHC2 zinc finger 6 101 3.7E-40 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:3.40.1360.10 247 373 1.7E-41 T 12-10-2018 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 Gene3D G3DSA:1.20.50.20 374 430 2.7E-15 T 12-10-2018 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 TIGRFAM TIGR01391 dnaG: DNA primase 5 424 4.8E-149 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 vfu_A02998 ff2a1ac052a0e61942c12b34dc5fa7ab 581 SUPERFAMILY SSF117023 448 580 1.44E-44 T 12-10-2018 vfu_A00088 3fd39ca48106348b571d8f5a5dcd92e3 190 Pfam PF04222 Protein of unknown function (DUF416) 2 189 1.1E-76 T 12-10-2018 IPR007338 Protein of unknown function DUF416 vfu_A00088 3fd39ca48106348b571d8f5a5dcd92e3 190 Gene3D G3DSA:1.20.1590.10 1 190 1.7E-64 T 12-10-2018 IPR023381 YP001051499.1-like domain superfamily vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 SUPERFAMILY SSF51395 1 336 5.5E-107 T 12-10-2018 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 Gene3D G3DSA:3.20.20.70 2 336 1.2E-142 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.4E-92 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 PIRSF PIRSF000164 10 336 4.9E-102 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.522 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 vfu_A01930 ac63abed5b6d73a236cb83a9d77d3763 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 7.5E-149 T 12-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 vfu_B01500 f83941edb7a8c82d249b90209151223c 312 Pfam PF12833 Helix-turn-helix domain 232 309 3.9E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01500 f83941edb7a8c82d249b90209151223c 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 292 7.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01500 f83941edb7a8c82d249b90209151223c 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 308 7.2E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01500 f83941edb7a8c82d249b90209151223c 312 SMART SM00342 225 308 3.6E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01500 f83941edb7a8c82d249b90209151223c 312 Gene3D G3DSA:1.10.10.60 205 312 2.8E-27 T 12-10-2018 vfu_B01500 f83941edb7a8c82d249b90209151223c 312 Pfam PF14525 AraC-binding-like domain 19 169 7.9E-11 T 12-10-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like vfu_B01500 f83941edb7a8c82d249b90209151223c 312 SUPERFAMILY SSF46689 261 310 1.43E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00191 d04018d5d02ca7bddd02cf636d8d26f3 309 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 281 2.8E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_B00168 916bdc0f109c9c7a060f754c333df8a0 243 SUPERFAMILY SSF53681 157 209 2.11E-5 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_B00168 916bdc0f109c9c7a060f754c333df8a0 243 Pfam PF01177 Asp/Glu/Hydantoin racemase 42 208 1.3E-15 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_B00168 916bdc0f109c9c7a060f754c333df8a0 243 Gene3D G3DSA:3.40.50.12500 1 243 4.6E-86 T 12-10-2018 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 SUPERFAMILY SSF52172 8 136 1.28E-31 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 SMART SM00448 8 119 1.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.4E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 SUPERFAMILY SSF46894 134 198 3.37E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 Gene3D G3DSA:1.10.10.10 134 196 3.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 Gene3D G3DSA:3.40.50.2300 4 131 3.3E-38 T 12-10-2018 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 193 5.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 SMART SM00421 139 196 1.2E-16 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 Pfam PF00072 Response regulator receiver domain 10 119 2.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01445 9ab2cd65cb1589e4c35ce409728c5e7e 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.377 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 SMART SM01390 3 95 6.9E-50 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.5E-32 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 Gene3D G3DSA:1.10.1050.10 1 102 8.8E-45 T 12-10-2018 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 Gene3D G3DSA:3.10.290.10 103 191 3.8E-36 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 Pfam PF01479 S4 domain 97 143 4.9E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 SUPERFAMILY SSF55174 3 206 6.28E-72 T 12-10-2018 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 5.7E-85 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 vfu_A00690 5a3c4f33588e8fad83253a408d2df34e 206 SMART SM00363 96 160 1.3E-19 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 SMART SM00079 26 253 1.6E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 SUPERFAMILY SSF53850 1 255 5.98E-72 T 12-10-2018 vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 2.8E-63 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Gene3D G3DSA:3.40.190.10 112 210 3.7E-76 T 12-10-2018 vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 SMART SM00062 26 254 8.7E-71 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 6 251 7.1E-88 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 vfu_A02368 8f609b2dfe2ce042a8b1a13b6b0b5dfe 258 Gene3D G3DSA:3.40.190.10 30 251 3.7E-76 T 12-10-2018 vfu_A01207 f95b3b38b7ed433ce4411018fba50ae5 207 Pfam PF03458 UPF0126 domain 92 162 1.5E-18 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 vfu_A01207 f95b3b38b7ed433ce4411018fba50ae5 207 Pfam PF03458 UPF0126 domain 5 78 9.7E-20 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 vfu_A00413 4b8edf17b39eb4353feb77498899b6b2 212 Gene3D G3DSA:3.30.1050.10 7 118 3.4E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily vfu_A00413 4b8edf17b39eb4353feb77498899b6b2 212 Pfam PF02036 SCP-2 sterol transfer family 15 111 2.9E-24 T 12-10-2018 IPR003033 SCP2 sterol-binding domain vfu_A00413 4b8edf17b39eb4353feb77498899b6b2 212 SUPERFAMILY SSF55718 15 117 4.0E-11 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily vfu_A02808 c40d6ac00af67e4bb1425357a66f2ba9 733 Gene3D G3DSA:1.10.3720.10 493 730 1.4E-23 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02808 c40d6ac00af67e4bb1425357a66f2ba9 733 SUPERFAMILY SSF69322 59 388 3.14E-9 T 12-10-2018 vfu_A02808 c40d6ac00af67e4bb1425357a66f2ba9 733 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 451 727 2.8E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02808 c40d6ac00af67e4bb1425357a66f2ba9 733 SUPERFAMILY SSF161098 429 670 8.18E-20 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02015 8c4be9f5a0d9cce1abce50c17489dd89 380 SUPERFAMILY SSF50969 39 344 8.63E-44 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like vfu_A02015 8c4be9f5a0d9cce1abce50c17489dd89 380 Gene3D G3DSA:2.130.10.10 40 377 4.2E-94 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_A02015 8c4be9f5a0d9cce1abce50c17489dd89 380 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 43 377 1.1E-25 T 12-10-2018 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 vfu_B00607 9e397d3f720feef9a3993aedaf8b6cd3 190 Gene3D G3DSA:2.60.40.1090 35 189 2.9E-26 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_B00607 9e397d3f720feef9a3993aedaf8b6cd3 190 Pfam PF00419 Fimbrial protein 36 190 6.4E-15 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 vfu_B00607 9e397d3f720feef9a3993aedaf8b6cd3 190 SUPERFAMILY SSF49401 35 190 1.19E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_A00271 91f299a40634ba88f2770d80146f792f 372 Gene3D G3DSA:3.10.350.10 42 89 2.4E-14 T 12-10-2018 IPR036779 LysM domain superfamily vfu_A00271 91f299a40634ba88f2770d80146f792f 372 Pfam PF01476 LysM domain 44 89 4.3E-12 T 12-10-2018 IPR018392 LysM domain vfu_A00271 91f299a40634ba88f2770d80146f792f 372 SUPERFAMILY SSF54106 42 90 2.88E-7 T 12-10-2018 vfu_A00271 91f299a40634ba88f2770d80146f792f 372 SMART SM00257 43 91 4.4E-7 T 12-10-2018 IPR018392 LysM domain vfu_A00664 7c820208928210387f9e11f903c501e9 453 Gene3D G3DSA:2.40.50.140 290 400 1.1E-26 T 12-10-2018 vfu_A00664 7c820208928210387f9e11f903c501e9 453 SUPERFAMILY SSF50249 288 379 8.21E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00664 7c820208928210387f9e11f903c501e9 453 SMART SM00316 287 370 2.8E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A00664 7c820208928210387f9e11f903c501e9 453 SMART SM00955 1 232 2.4E-57 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 vfu_A00664 7c820208928210387f9e11f903c501e9 453 SUPERFAMILY SSF50249 1 287 7.42E-80 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00664 7c820208928210387f9e11f903c501e9 453 Pfam PF00773 RNB domain 1 231 1.9E-58 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 vfu_A00664 7c820208928210387f9e11f903c501e9 453 Pfam PF00575 S1 RNA binding domain 287 368 8.8E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A00664 7c820208928210387f9e11f903c501e9 453 ProSitePatterns PS01175 Ribonuclease II family signature. 199 223 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site vfu_A00664 7c820208928210387f9e11f903c501e9 453 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 1 370 5.4E-140 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 Gene3D G3DSA:3.30.1330.60 204 316 9.8E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 SUPERFAMILY SSF56925 18 154 6.28E-9 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 Pfam PF01389 OmpA-like transmembrane domain 49 107 1.5E-4 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 Pfam PF00691 OmpA family 224 308 5.8E-16 T 12-10-2018 IPR006665 OmpA-like domain vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 Gene3D G3DSA:2.40.160.20 16 156 1.1E-9 T 12-10-2018 vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 PRINTS PR01021 OMPA domain signature 244 259 1.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 PRINTS PR01021 OMPA domain signature 259 275 1.1E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B01143 fff7853557459e99ebc9ace65586fb42 316 SUPERFAMILY SSF103088 214 314 2.88E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01074 e761ebf65dc8b85c4fab4505bb7ed092 280 Pfam PF01148 Cytidylyltransferase family 2 280 1.9E-69 T 12-10-2018 vfu_A01074 e761ebf65dc8b85c4fab4505bb7ed092 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 Pfam PF03466 LysR substrate binding domain 89 293 1.2E-40 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 Gene3D G3DSA:1.10.10.10 1 92 7.5E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 Gene3D G3DSA:3.40.190.10 163 267 2.5E-72 T 12-10-2018 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 SUPERFAMILY SSF53850 89 296 8.14E-39 T 12-10-2018 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 Gene3D G3DSA:3.40.190.10 93 290 2.5E-72 T 12-10-2018 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 SUPERFAMILY SSF46785 1 112 6.02E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02275 ce11471394dfe6717bbed0995fc958e6 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 SUPERFAMILY SSF81923 1 142 2.22E-59 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 488 648 7.7E-47 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 326 8.4E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 597 611 1.6E-35 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 1.6E-35 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 1.6E-35 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 582 1.6E-35 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 SMART SM00382 208 353 3.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 SMART SM00382 489 656 4.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 SUPERFAMILY SSF52540 439 744 3.62E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:3.40.50.300 159 352 6.4E-63 T 12-10-2018 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:1.10.8.60 353 440 1.1E-35 T 12-10-2018 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:3.40.50.300 441 654 1.3E-74 T 12-10-2018 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:1.10.1780.10 1 143 1.5E-42 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 736 0.0 T 12-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 SMART SM01086 655 744 1.7E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 304 316 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Gene3D G3DSA:1.10.8.60 655 755 2.5E-30 T 12-10-2018 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 735 3.7E-24 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 520 538 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 SUPERFAMILY SSF52540 170 423 1.04E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01606 bde3aa1b40a8c3155c829d13ba89a6ec 755 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 3.9E-12 T 12-10-2018 IPR004176 Clp, N-terminal vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 Gene3D G3DSA:3.50.50.60 7 328 4.3E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 Gene3D G3DSA:3.30.390.30 345 464 1.0E-32 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.5E-52 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.584 T 12-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 SUPERFAMILY SSF51905 2 322 1.12E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 SUPERFAMILY SSF55424 345 463 2.23E-30 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 Gene3D G3DSA:3.50.50.60 151 269 4.3E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.1E-29 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 5.6E-60 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PIRSF PIRSF000350 1 463 1.2E-69 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.9E-28 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.9E-28 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 2.9E-28 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 2.9E-28 T 12-10-2018 vfu_A00482 8cac2c77a4212c52338a2bc2a802e220 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 2.9E-28 T 12-10-2018 vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 Pfam PF00563 EAL domain 148 378 1.8E-61 T 12-10-2018 IPR001633 EAL domain vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 SMART SM00448 8 125 1.2E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 Pfam PF00072 Response regulator receiver domain 10 121 3.3E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 Gene3D G3DSA:3.20.20.450 145 388 9.5E-69 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 Gene3D G3DSA:3.40.50.2300 8 135 5.5E-23 T 12-10-2018 vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 SUPERFAMILY SSF141868 147 385 8.63E-68 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 SUPERFAMILY SSF52172 10 128 1.2E-21 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00135 9adf301547d5fd5d25f198fa1f2a5492 392 SMART SM00052 141 383 1.2E-52 T 12-10-2018 IPR001633 EAL domain vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 214 247 20.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 69 102 81.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 180 213 0.76 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 SMART SM00028 141 174 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 Gene3D G3DSA:1.25.40.10 22 177 2.7E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.262 T 12-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 SUPERFAMILY SSF81901 39 273 5.23E-18 T 12-10-2018 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 Gene3D G3DSA:1.25.40.10 178 355 8.4E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02420 1263b03c85249cf3b18bbe022ca2335c 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.02 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_B00542 445862df554473cc970131a89b541ae8 455 PIRSF PIRSF006603 1 452 1.7E-60 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00542 445862df554473cc970131a89b541ae8 455 Pfam PF01554 MatE 245 406 3.2E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00542 445862df554473cc970131a89b541ae8 455 Pfam PF01554 MatE 21 180 6.8E-28 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00542 445862df554473cc970131a89b541ae8 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 418 1.9E-53 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 SMART SM00941 350 424 3.4E-28 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 3.7E-49 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 PIRSF PIRSF000478 1 438 5.6E-150 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 SUPERFAMILY SSF54680 337 437 5.89E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Gene3D G3DSA:3.40.1030.10 70 322 5.0E-128 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.2E-21 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 SUPERFAMILY SSF47648 2 70 1.13E-21 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Gene3D G3DSA:3.90.1170.30 337 431 2.6E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 7.8E-214 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.3E-160 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Gene3D G3DSA:1.20.970.10 7 195 5.0E-128 T 12-10-2018 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 SUPERFAMILY SSF52418 73 333 3.53E-88 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 3.1E-23 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02880 17ad8c31ce256f10ce605389c1bf2cef 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.687 T 12-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 vfu_B01320 c48ab7668ae2a57e7d9a2a22db6c4d3f 318 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 15 317 6.0E-107 T 12-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 vfu_B01320 c48ab7668ae2a57e7d9a2a22db6c4d3f 318 SUPERFAMILY SSF51197 13 316 1.19E-77 T 12-10-2018 vfu_B01320 c48ab7668ae2a57e7d9a2a22db6c4d3f 318 Pfam PF08943 CsiD 16 316 5.3E-145 T 12-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 vfu_B01320 c48ab7668ae2a57e7d9a2a22db6c4d3f 318 Gene3D G3DSA:3.60.130.10 11 318 1.9E-108 T 12-10-2018 vfu_A00226 418206bccfc3ff0915b41d3874229c66 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 4.7E-24 T 12-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane vfu_A02042 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 PIRSF PIRSF005624 14 235 8.2E-98 T 12-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 vfu_A02042 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 22 232 7.4E-92 T 12-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 vfu_A02042 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 Gene3D G3DSA:3.40.50.300 29 235 3.9E-63 T 12-10-2018 vfu_A02042 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 49 211 6.1E-36 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain vfu_A02042 4bbbbe3bea8db69d1ec6b20dbe05ccca 236 SUPERFAMILY SSF52540 20 231 3.25E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01625 462accfef1a3ef93678aa5b1e7f82add 269 Pfam PF02698 DUF218 domain 80 239 3.3E-25 T 12-10-2018 IPR003848 Domain of unknown function DUF218 vfu_A00238 a2cfed4a973eacef0c80023f1774297e 445 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 vfu_A00238 a2cfed4a973eacef0c80023f1774297e 445 Gene3D G3DSA:1.10.510.10 160 316 6.1E-31 T 12-10-2018 vfu_A00238 a2cfed4a973eacef0c80023f1774297e 445 Gene3D G3DSA:3.30.200.20 69 157 1.6E-19 T 12-10-2018 vfu_A00238 a2cfed4a973eacef0c80023f1774297e 445 SUPERFAMILY SSF56112 67 303 2.02E-54 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_A00238 a2cfed4a973eacef0c80023f1774297e 445 SMART SM00220 78 325 5.2E-28 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 vfu_A00238 a2cfed4a973eacef0c80023f1774297e 445 Pfam PF00069 Protein kinase domain 78 278 2.1E-39 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 vfu_A00833 62b278505b49bdf1ed607c333ed23e11 156 PIRSF PIRSF004923 1 156 7.8E-38 T 12-10-2018 IPR026268 Protein RseC vfu_A00833 62b278505b49bdf1ed607c333ed23e11 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 16 149 3.0E-32 T 12-10-2018 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SUPERFAMILY SSF47226 875 982 1.7E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SUPERFAMILY SSF47384 458 535 3.14E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 8.4E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SMART SM00388 469 534 2.1E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Gene3D G3DSA:1.20.58.920 179 322 1.1E-44 T 12-10-2018 IPR038188 TorS, sensor domain superfamily vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Gene3D G3DSA:1.20.58.920 47 178 7.2E-34 T 12-10-2018 IPR038188 TorS, sensor domain superfamily vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 634 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 648 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 654 672 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 691 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SMART SM00387 581 694 1.7E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Gene3D G3DSA:3.40.50.2300 704 833 5.6E-33 T 12-10-2018 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 PIRSF PIRSF036437 1 983 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SMART SM00304 360 412 0.0018 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Pfam PF00072 Response regulator receiver domain 714 828 8.6E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SUPERFAMILY SSF52172 712 845 3.7E-33 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Gene3D G3DSA:1.20.120.160 870 985 4.3E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Pfam PF01627 Hpt domain 908 971 7.1E-10 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Gene3D G3DSA:1.10.287.130 433 532 1.1E-25 T 12-10-2018 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SUPERFAMILY SSF55874 523 692 7.73E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 980 0.0 T 12-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Gene3D G3DSA:3.30.565.10 533 696 7.3E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 SMART SM00448 712 828 6.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00334 c24d512a24e4f3b9de143c5027e6e2c8 986 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 692 2.2E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02601 115694ea13e13f9e6856909108766e71 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.3E-137 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02601 115694ea13e13f9e6856909108766e71 308 Pfam PF01039 Carboxyl transferase domain 99 241 1.8E-11 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 vfu_A02601 115694ea13e13f9e6856909108766e71 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.054 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02601 115694ea13e13f9e6856909108766e71 308 SUPERFAMILY SSF52096 25 280 3.73E-82 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A02601 115694ea13e13f9e6856909108766e71 308 Gene3D G3DSA:3.90.226.10 25 285 1.4E-80 T 12-10-2018 vfu_A02601 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02601 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02601 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02601 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02601 115694ea13e13f9e6856909108766e71 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A03143 a7e02417357e17cd837394352a25db4a 287 Gene3D G3DSA:3.40.50.10490 13 98 5.2E-103 T 12-10-2018 vfu_A03143 a7e02417357e17cd837394352a25db4a 287 SUPERFAMILY SSF53697 6 260 4.17E-93 T 12-10-2018 vfu_A03143 a7e02417357e17cd837394352a25db4a 287 Pfam PF00342 Phosphoglucose isomerase 53 261 1.2E-98 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03143 a7e02417357e17cd837394352a25db4a 287 Gene3D G3DSA:3.40.50.10490 99 262 5.2E-103 T 12-10-2018 vfu_A02453 e3cf593b4d8c31c80b8217c26f0f66f7 206 Pfam PF01810 LysE type translocator 16 204 4.7E-27 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A02453 e3cf593b4d8c31c80b8217c26f0f66f7 206 PIRSF PIRSF006324 1 206 6.4E-44 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 SUPERFAMILY SSF52821 25 125 1.11E-13 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 SUPERFAMILY SSF52821 286 417 2.88E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 ProSitePatterns PS00380 Rhodanese signature 1. 180 191 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 Gene3D G3DSA:3.40.250.10 19 132 6.3E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 Gene3D G3DSA:3.40.250.10 282 419 3.7E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 SUPERFAMILY SSF52821 166 277 7.99E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 Gene3D G3DSA:3.40.250.10 138 281 3.5E-36 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 SMART SM00450 294 419 3.5E-7 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 SMART SM00450 25 137 0.0065 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 SMART SM00450 153 266 6.4E-12 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 Pfam PF00581 Rhodanese-like domain 36 132 6.7E-9 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 Pfam PF00581 Rhodanese-like domain 304 417 1.1E-9 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A02040 fa89494b1033dfa17f1171b69db8e12d 419 Pfam PF00581 Rhodanese-like domain 169 261 1.3E-13 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00898 6381e6e3ac6e970e67124aa0601a1d54 450 Gene3D G3DSA:3.90.640.10 335 378 6.0E-10 T 12-10-2018 vfu_B00898 6381e6e3ac6e970e67124aa0601a1d54 450 Pfam PF00012 Hsp70 protein 129 259 5.7E-11 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_B00898 6381e6e3ac6e970e67124aa0601a1d54 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_B00898 6381e6e3ac6e970e67124aa0601a1d54 450 Gene3D G3DSA:3.30.420.40 379 433 6.0E-10 T 12-10-2018 vfu_B00898 6381e6e3ac6e970e67124aa0601a1d54 450 SUPERFAMILY SSF53067 207 447 5.31E-30 T 12-10-2018 vfu_B00898 6381e6e3ac6e970e67124aa0601a1d54 450 SUPERFAMILY SSF53067 1 205 5.18E-26 T 12-10-2018 vfu_A02078 9cf213ab28c6ec1dc49579bb9e7c4f78 365 Gene3D G3DSA:3.40.50.150 78 353 3.1E-74 T 12-10-2018 vfu_A02078 9cf213ab28c6ec1dc49579bb9e7c4f78 365 PIRSF PIRSF029038 34 365 1.7E-152 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 vfu_A02078 9cf213ab28c6ec1dc49579bb9e7c4f78 365 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 45 355 54.544 T 12-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 vfu_A02078 9cf213ab28c6ec1dc49579bb9e7c4f78 365 SUPERFAMILY SSF53335 84 353 1.54E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02078 9cf213ab28c6ec1dc49579bb9e7c4f78 365 Pfam PF05971 Protein of unknown function (DUF890) 45 353 3.7E-139 T 12-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 vfu_A02641 ce84337dbddc2428b34574f46abe5267 370 Pfam PF02562 PhoH-like protein 120 323 1.2E-94 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 vfu_A02641 ce84337dbddc2428b34574f46abe5267 370 SUPERFAMILY SSF52540 119 321 4.25E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02641 ce84337dbddc2428b34574f46abe5267 370 Gene3D G3DSA:3.40.50.300 117 323 1.1E-73 T 12-10-2018 vfu_A02238 4cb89a4d1813a8d5244146fd253ceb43 129 TIGRFAM TIGR00208 fliS: flagellar protein FliS 9 126 1.5E-15 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A02238 4cb89a4d1813a8d5244146fd253ceb43 129 Pfam PF02561 Flagellar protein FliS 11 125 4.7E-21 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A02238 4cb89a4d1813a8d5244146fd253ceb43 129 SUPERFAMILY SSF101116 10 128 7.98E-26 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 vfu_A02238 4cb89a4d1813a8d5244146fd253ceb43 129 Gene3D G3DSA:1.20.120.340 2 129 2.5E-22 T 12-10-2018 vfu_B00161 9015a7c92306dcc86e10ce057ee30be5 137 Pfam PF13508 Acetyltransferase (GNAT) domain 44 119 9.6E-11 T 12-10-2018 IPR000182 GNAT domain vfu_B00161 9015a7c92306dcc86e10ce057ee30be5 137 Gene3D G3DSA:3.40.630.30 3 132 2.4E-29 T 12-10-2018 vfu_B00161 9015a7c92306dcc86e10ce057ee30be5 137 SUPERFAMILY SSF55729 14 122 3.66E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A02861 aad22936a752e8fd65f6f9028c4faaaf 489 Pfam PF00263 Bacterial type II and III secretion system protein 260 422 1.9E-39 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 vfu_A02861 aad22936a752e8fd65f6f9028c4faaaf 489 Pfam PF13629 Pilus formation protein N terminal region 26 95 9.8E-19 T 12-10-2018 IPR032789 Pilus formation protein, N-terminal vfu_A02861 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 388 406 9.2E-13 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A02861 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 254 278 9.2E-13 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A02861 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 178 188 9.2E-13 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A02861 aad22936a752e8fd65f6f9028c4faaaf 489 PRINTS PR00811 Bacterial general secretion pathway protein D signature 411 425 9.2E-13 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A01309 999106e20a17a0ee7caf460bdd26bda1 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site vfu_A01309 999106e20a17a0ee7caf460bdd26bda1 77 Gene3D G3DSA:1.10.1200.10 1 76 1.8E-30 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01309 999106e20a17a0ee7caf460bdd26bda1 77 SUPERFAMILY SSF47336 2 76 5.23E-24 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01309 999106e20a17a0ee7caf460bdd26bda1 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.891 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 vfu_A01309 999106e20a17a0ee7caf460bdd26bda1 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.2E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01309 999106e20a17a0ee7caf460bdd26bda1 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.0E-37 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 vfu_A02468 088befdab286776ccde13da3cd5a8804 207 Gene3D G3DSA:3.30.750.120 1 99 3.5E-29 T 12-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily vfu_A02468 088befdab286776ccde13da3cd5a8804 207 SUPERFAMILY SSF63848 100 203 9.42E-31 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 vfu_A02468 088befdab286776ccde13da3cd5a8804 207 Gene3D G3DSA:2.160.20.70 100 206 1.2E-31 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 vfu_A02468 088befdab286776ccde13da3cd5a8804 207 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 1 206 24.811 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 vfu_A02468 088befdab286776ccde13da3cd5a8804 207 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 102 202 2.5E-32 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 vfu_A02468 088befdab286776ccde13da3cd5a8804 207 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 89 2.6E-26 T 12-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 vfu_A02468 088befdab286776ccde13da3cd5a8804 207 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 1 203 3.8E-74 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 Gene3D G3DSA:3.40.50.720 4 263 1.3E-57 T 12-10-2018 vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 SUPERFAMILY SSF51735 4 248 1.31E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_A02625 243e01091a25c0ee5fb49574ee3290a0 275 Pfam PF00106 short chain dehydrogenase 5 186 4.9E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01773 071a7353d3824214967689a8d6aba9f1 1135 SUPERFAMILY SSF103647 232 327 8.76E-9 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 vfu_A01773 071a7353d3824214967689a8d6aba9f1 1135 SUPERFAMILY SSF103647 325 398 5.89E-8 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 vfu_A01773 071a7353d3824214967689a8d6aba9f1 1135 Gene3D G3DSA:4.10.1080.10 293 404 8.2E-12 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 vfu_A00472 c2770aacf7f81c028ea0b7aeca55d735 281 Pfam PF01694 Rhomboid family 134 269 4.9E-31 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 vfu_A00472 c2770aacf7f81c028ea0b7aeca55d735 281 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 271 3.3E-119 T 12-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 vfu_A00472 c2770aacf7f81c028ea0b7aeca55d735 281 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 87 4.8E-32 T 12-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 vfu_A00472 c2770aacf7f81c028ea0b7aeca55d735 281 Gene3D G3DSA:1.20.1540.10 94 271 4.8E-51 T 12-10-2018 IPR035952 Rhomboid-like superfamily vfu_A00472 c2770aacf7f81c028ea0b7aeca55d735 281 SUPERFAMILY SSF144091 96 269 1.19E-39 T 12-10-2018 vfu_A00472 c2770aacf7f81c028ea0b7aeca55d735 281 Gene3D G3DSA:3.30.70.2350 1 71 8.2E-26 T 12-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily vfu_A02227 0912f8cfa0996eb2fd26fd35fdf188c1 98 Gene3D G3DSA:3.30.70.1060 1 98 3.9E-38 T 12-10-2018 vfu_A02227 0912f8cfa0996eb2fd26fd35fdf188c1 98 SUPERFAMILY SSF54909 1 98 3.4E-32 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A02227 0912f8cfa0996eb2fd26fd35fdf188c1 98 Pfam PF03795 YCII-related domain 1 95 7.3E-29 T 12-10-2018 IPR005545 YCII-related vfu_A03002 f19ecca7880a3a83f2fd4019d98d8ffc 395 Pfam PF13356 Arm DNA-binding domain 9 99 1.1E-12 T 12-10-2018 IPR025166 Integrase, DNA-binding domain vfu_A03002 f19ecca7880a3a83f2fd4019d98d8ffc 395 Gene3D G3DSA:1.10.443.10 207 387 2.1E-35 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A03002 f19ecca7880a3a83f2fd4019d98d8ffc 395 Pfam PF00589 Phage integrase family 209 375 2.3E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A03002 f19ecca7880a3a83f2fd4019d98d8ffc 395 Gene3D G3DSA:3.30.160.390 7 97 6.3E-12 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily vfu_A03002 f19ecca7880a3a83f2fd4019d98d8ffc 395 Gene3D G3DSA:1.10.150.130 98 206 2.3E-17 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A03002 f19ecca7880a3a83f2fd4019d98d8ffc 395 SUPERFAMILY SSF56349 105 381 2.94E-61 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A00370 0b7ae86e17be9f05135e06e1e2e77548 269 Gene3D G3DSA:3.40.50.720 2 254 4.0E-81 T 12-10-2018 vfu_A00370 0b7ae86e17be9f05135e06e1e2e77548 269 SUPERFAMILY SSF69572 2 247 2.09E-73 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 vfu_A00370 0b7ae86e17be9f05135e06e1e2e77548 269 Pfam PF00899 ThiF family 10 247 6.8E-57 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 Gene3D G3DSA:1.20.120.1320 42 135 6.9E-101 T 12-10-2018 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 Pfam PF00696 Amino acid kinase family 6 278 9.9E-49 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 Gene3D G3DSA:3.30.70.260 304 445 7.5E-45 T 12-10-2018 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 448 4.5E-123 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 Gene3D G3DSA:3.40.1160.10 6 290 6.9E-101 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 448 1.8E-121 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 SUPERFAMILY SSF55021 378 447 1.37E-11 T 12-10-2018 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 SUPERFAMILY SSF53633 6 293 7.99E-80 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 PIRSF PIRSF000726 2 448 1.7E-125 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 SUPERFAMILY SSF55021 297 394 1.42E-19 T 12-10-2018 vfu_A03126 d9d61188e1521c782b3f1a8f285e70b4 448 Gene3D G3DSA:3.30.70.260 310 383 7.5E-45 T 12-10-2018 vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.4E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 Gene3D G3DSA:3.30.1340.10 1 85 1.2E-31 T 12-10-2018 IPR035895 HPr-like superfamily vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.7E-27 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 SUPERFAMILY SSF55594 1 82 4.71E-26 T 12-10-2018 IPR035895 HPr-like superfamily vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A02636 4523206d4d8807325c60ea785bbb8f9e 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-18 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B00709 25c7354d41ffa4440563f57f2e78b79a 347 Gene3D G3DSA:3.40.630.30 1 271 4.5E-115 T 12-10-2018 vfu_B00709 25c7354d41ffa4440563f57f2e78b79a 347 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 336 6.9E-150 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_B00709 25c7354d41ffa4440563f57f2e78b79a 347 SUPERFAMILY SSF55729 1 337 1.72E-127 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00709 25c7354d41ffa4440563f57f2e78b79a 347 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 1.3E-140 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_B00709 25c7354d41ffa4440563f57f2e78b79a 347 Gene3D G3DSA:2.40.40.20 276 338 8.7E-6 T 12-10-2018 vfu_B00709 25c7354d41ffa4440563f57f2e78b79a 347 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.8E-141 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 SUPERFAMILY SSF102114 50 146 2.62E-7 T 12-10-2018 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 32 245 8.5E-111 T 12-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 PIRSF PIRSF000370 24 246 8.2E-68 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 26 246 35.373 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 Pfam PF13394 4Fe-4S single cluster domain 47 159 1.3E-11 T 12-10-2018 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 Pfam PF04055 Radical SAM superfamily 50 147 4.4E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02003 5de862f067e0f7f780a3bfb1293ae4bc 246 Gene3D G3DSA:3.20.20.70 25 246 4.9E-53 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01869 813a22a482641919230c2355716fd20e 186 Pfam PF12804 MobA-like NTP transferase domain 1 149 1.8E-36 T 12-10-2018 IPR025877 MobA-like NTP transferase vfu_A01869 813a22a482641919230c2355716fd20e 186 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 181 26.681 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 vfu_A01869 813a22a482641919230c2355716fd20e 186 Gene3D G3DSA:3.90.550.10 1 183 3.3E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01869 813a22a482641919230c2355716fd20e 186 SUPERFAMILY SSF53448 1 178 1.09E-35 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01869 813a22a482641919230c2355716fd20e 186 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 1 179 1.2E-71 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 156 1.3E-65 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 PIRSF PIRSF001338 1 160 1.1E-66 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 Pfam PF00731 AIR carboxylase 3 150 5.2E-63 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 Gene3D G3DSA:3.40.50.7700 1 161 1.9E-70 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 31.963 T 12-10-2018 IPR033747 Class I PurE vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 SMART SM01001 1 152 2.4E-101 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 vfu_A00266 a4e88f9a44e2cb370c00811ddc46a4ef 161 SUPERFAMILY SSF52255 2 158 4.45E-65 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 vfu_B01511 a451822b8a40fbe4beadf935f3b04a7b 329 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 5 87 2.6E-25 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 vfu_B01511 a451822b8a40fbe4beadf935f3b04a7b 329 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 6.2E-134 T 12-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 vfu_B01511 a451822b8a40fbe4beadf935f3b04a7b 329 Gene3D G3DSA:1.10.150.130 1 94 8.2E-32 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_B01511 a451822b8a40fbe4beadf935f3b04a7b 329 Gene3D G3DSA:1.10.443.10 95 310 1.6E-60 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_B01511 a451822b8a40fbe4beadf935f3b04a7b 329 Pfam PF00589 Phage integrase family 105 305 7.3E-39 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_B01511 a451822b8a40fbe4beadf935f3b04a7b 329 SUPERFAMILY SSF56349 13 306 6.18E-46 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 Pfam PF01197 Ribosomal protein L31 1 77 1.1E-24 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.923 T 12-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 3.1E-17 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 9.7E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 9.7E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.7E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 SUPERFAMILY SSF143800 1 80 1.49E-20 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02705 85955cc6e4c449920122523bfc665c3a 85 Gene3D G3DSA:2.30.170.50 1 83 9.1E-23 T 12-10-2018 vfu_A01744 b3774053d3c5f1e83d78b6610197a4e4 202 SUPERFAMILY SSF142695 23 176 7.45E-55 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A01744 b3774053d3c5f1e83d78b6610197a4e4 202 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 4 202 37.768 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A01744 b3774053d3c5f1e83d78b6610197a4e4 202 Pfam PF00925 GTP cyclohydrolase II 23 175 1.3E-59 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A01744 b3774053d3c5f1e83d78b6610197a4e4 202 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 27 198 3.6E-62 T 12-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A01744 b3774053d3c5f1e83d78b6610197a4e4 202 Gene3D G3DSA:3.40.50.10990 8 178 4.5E-64 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 vfu_A02673 87ad7eea3f4fc02a731d4965af8396d4 112 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 37 108 3.5E-17 T 12-10-2018 IPR018660 C-type lysozyme inhibitor vfu_A02673 87ad7eea3f4fc02a731d4965af8396d4 112 Gene3D G3DSA:2.40.128.200 33 112 5.9E-13 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily vfu_A02673 87ad7eea3f4fc02a731d4965af8396d4 112 SUPERFAMILY SSF141488 34 111 6.8E-12 T 12-10-2018 IPR036328 C-type lysozyme inhibitor superfamily vfu_B00138 527e41e3404baaef917ea3d3dce0e5dc 377 Pfam PF00990 Diguanylate cyclase, GGDEF domain 222 367 9.2E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B00138 527e41e3404baaef917ea3d3dce0e5dc 377 SUPERFAMILY SSF55073 226 368 1.57E-33 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00138 527e41e3404baaef917ea3d3dce0e5dc 377 Gene3D G3DSA:3.30.70.270 220 375 2.1E-38 T 12-10-2018 vfu_B00138 527e41e3404baaef917ea3d3dce0e5dc 377 SMART SM00267 210 373 1.3E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B00138 527e41e3404baaef917ea3d3dce0e5dc 377 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 368 6.6E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_A00215 337b87974f89c98aa0467913993033c4 702 Gene3D G3DSA:2.170.130.10 39 172 1.8E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_A00215 337b87974f89c98aa0467913993033c4 702 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 52 - T 12-10-2018 IPR010916 TonB box, conserved site vfu_A00215 337b87974f89c98aa0467913993033c4 702 Pfam PF00593 TonB dependent receptor 264 701 1.4E-58 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A00215 337b87974f89c98aa0467913993033c4 702 Gene3D G3DSA:2.40.170.20 173 702 9.5E-127 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A00215 337b87974f89c98aa0467913993033c4 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 162 1.5E-17 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_A00215 337b87974f89c98aa0467913993033c4 702 SUPERFAMILY SSF56935 38 702 1.08E-130 T 12-10-2018 vfu_A00215 337b87974f89c98aa0467913993033c4 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 701 6.8E-103 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_A02141 01156288ee5f1eae584a4ce0539c08d8 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 3.2E-54 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 vfu_A02141 01156288ee5f1eae584a4ce0539c08d8 185 Gene3D G3DSA:1.20.120.1760 2 180 7.5E-18 T 12-10-2018 vfu_A02141 01156288ee5f1eae584a4ce0539c08d8 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 7.5E-18 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 vfu_A02141 01156288ee5f1eae584a4ce0539c08d8 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 vfu_A02141 01156288ee5f1eae584a4ce0539c08d8 185 PIRSF PIRSF000847 1 185 3.8E-45 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 vfu_A01073 2403a2ef4b704ea2ff93f6a8829549a9 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.8E-81 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 vfu_A01073 2403a2ef4b704ea2ff93f6a8829549a9 250 Gene3D G3DSA:3.40.1180.10 1 239 9.1E-96 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 vfu_A01073 2403a2ef4b704ea2ff93f6a8829549a9 250 SUPERFAMILY SSF64005 10 234 1.18E-88 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 vfu_A01073 2403a2ef4b704ea2ff93f6a8829549a9 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 vfu_A01073 2403a2ef4b704ea2ff93f6a8829549a9 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 2.5E-95 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 vfu_A01073 2403a2ef4b704ea2ff93f6a8829549a9 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.5 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 Pfam PF01979 Amidohydrolase family 57 373 5.8E-14 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 SUPERFAMILY SSF51338 1 399 6.11E-25 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 396 1.1E-154 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 Gene3D G3DSA:2.30.40.10 7 395 1.5E-159 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 398 40.932 T 12-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 Gene3D G3DSA:3.20.20.140 60 358 1.5E-159 T 12-10-2018 vfu_A02152 9af66a08886160f870b83cf111bc30bd 400 SUPERFAMILY SSF51556 59 358 3.52E-82 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_B00026 94151b1d7e6a42fd16af7585b806afdf 440 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 6 419 1.1E-104 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type vfu_B00026 94151b1d7e6a42fd16af7585b806afdf 440 Pfam PF04403 Paraquat-inducible protein A 262 420 8.4E-54 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like vfu_B00026 94151b1d7e6a42fd16af7585b806afdf 440 Pfam PF04403 Paraquat-inducible protein A 49 208 1.6E-37 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like vfu_A01469 29163534a6c42bee116f17460f59f928 394 Gene3D G3DSA:3.60.120.10 3 392 3.8E-112 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A01469 29163534a6c42bee116f17460f59f928 394 Pfam PF00425 chorismate binding enzyme 122 376 3.5E-70 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal vfu_A01469 29163534a6c42bee116f17460f59f928 394 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 100 383 3.5E-81 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 vfu_A01469 29163534a6c42bee116f17460f59f928 394 SUPERFAMILY SSF56322 16 386 2.75E-85 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 SUPERFAMILY SSF51905 1 416 9.97E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.024 T 12-10-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.50.50.60 94 405 3.8E-52 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.30.9.10 134 362 3.8E-52 T 12-10-2018 vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 Gene3D G3DSA:3.50.50.60 3 56 9.0E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 Pfam PF01266 FAD dependent oxidoreductase 3 398 3.5E-70 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_A02743 dc01b8b13d6b79de5b28a0d102773f83 420 SUPERFAMILY SSF54373 270 360 3.53E-18 T 12-10-2018 vfu_B01283 7887db90e52097cd319f6e7d798f047a 335 Pfam PF01032 FecCD transport family 10 328 5.7E-93 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B01283 7887db90e52097cd319f6e7d798f047a 335 SUPERFAMILY SSF81345 4 329 5.49E-85 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B01283 7887db90e52097cd319f6e7d798f047a 335 Gene3D G3DSA:1.10.3470.10 1 334 4.1E-107 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 SMART SM00091 4 72 1.2E-6 T 12-10-2018 IPR000014 PAS domain vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 SUPERFAMILY SSF55874 198 347 2.23E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.2E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 Gene3D G3DSA:3.30.450.20 2 112 3.3E-28 T 12-10-2018 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 SMART SM00388 129 194 2.0E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 Gene3D G3DSA:1.10.287.130 133 191 9.0E-14 T 12-10-2018 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 Pfam PF00989 PAS fold 7 111 9.4E-17 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 SUPERFAMILY SSF47384 125 190 1.26E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 SMART SM00387 233 348 1.4E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 121 1.2E-6 T 12-10-2018 IPR000014 PAS domain vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.1E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 189 9.8E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 Gene3D G3DSA:3.30.565.10 192 348 1.3E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00495 bb38d0e978f37427191ccdccc5c519dd 348 SUPERFAMILY SSF55785 4 97 3.05E-10 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 31 444 7.2E-189 T 12-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 445 1.4E-165 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 SMART SM00382 166 349 0.0018 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 Gene3D G3DSA:3.40.50.12240 22 447 2.7E-150 T 12-10-2018 vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 365 2.0E-71 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 SUPERFAMILY SSF52540 102 371 1.1E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01408 f9e099d33421344c2d3faaa1489ee17d 448 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 SUPERFAMILY SSF55620 184 267 6.82E-9 T 12-10-2018 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 Gene3D G3DSA:3.30.1130.10 143 281 4.2E-61 T 12-10-2018 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 Pfam PF14489 QueF-like protein 194 270 8.3E-26 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 Gene3D G3DSA:3.30.1130.10 21 138 4.6E-46 T 12-10-2018 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 5.1E-127 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 PIRSF PIRSF004750 6 281 1.4E-129 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 160.272 T 12-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 vfu_A02680 db09e54897a6b9ba224ed55711490e75 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 3.4E-48 T 12-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 vfu_A00860 1a42c9dbf2cac13494101d74500add87 157 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 2 146 4.4E-50 T 12-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 vfu_A00860 1a42c9dbf2cac13494101d74500add87 157 SUPERFAMILY SSF55811 2 148 2.44E-38 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A00860 1a42c9dbf2cac13494101d74500add87 157 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_A00860 1a42c9dbf2cac13494101d74500add87 157 Gene3D G3DSA:3.90.79.10 1 156 1.8E-50 T 12-10-2018 vfu_A00860 1a42c9dbf2cac13494101d74500add87 157 Pfam PF00293 NUDIX domain 6 123 3.3E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A02180 488792bc7bd8b072c84716e9c8d97457 303 Pfam PF03466 LysR substrate binding domain 88 293 9.0E-31 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02180 488792bc7bd8b072c84716e9c8d97457 303 SUPERFAMILY SSF53850 88 296 1.32E-34 T 12-10-2018 vfu_A02180 488792bc7bd8b072c84716e9c8d97457 303 Gene3D G3DSA:3.40.190.290 91 293 2.7E-44 T 12-10-2018 vfu_A02180 488792bc7bd8b072c84716e9c8d97457 303 Gene3D G3DSA:1.10.10.10 2 88 1.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02180 488792bc7bd8b072c84716e9c8d97457 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02180 488792bc7bd8b072c84716e9c8d97457 303 SUPERFAMILY SSF46785 3 88 1.72E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 SUPERFAMILY SSF54980 292 370 1.55E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.30.70.870 286 367 2.4E-35 T 12-10-2018 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.187 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 SMART SM00838 398 486 0.0095 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 7.1E-17 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 SUPERFAMILY SSF52540 2 233 3.19E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.30.70.2570 479 553 1.2E-31 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.40.50.300 1 185 1.0E-70 T 12-10-2018 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.0E-48 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 2.1E-53 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 SUPERFAMILY SSF54980 399 493 3.79E-24 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 6.1E-10 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:3.30.70.3380 368 478 1.7E-38 T 12-10-2018 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Gene3D G3DSA:2.40.30.10 186 285 2.5E-34 T 12-10-2018 vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 Pfam PF00679 Elongation factor G C-terminus 399 482 1.5E-19 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like vfu_A00834 7386ac2bc103e5c38d684d222a742a49 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 4.0E-300 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 SUPERFAMILY SSF54631 57 198 1.83E-33 T 12-10-2018 vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 SMART SM01091 203 281 1.1E-30 T 12-10-2018 IPR005170 Transporter-associated domain vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 Pfam PF03471 Transporter associated domain 204 279 9.1E-23 T 12-10-2018 IPR005170 Transporter-associated domain vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 Gene3D G3DSA:3.10.580.10 49 195 3.7E-54 T 12-10-2018 vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 Pfam PF00571 CBS domain 67 124 8.4E-8 T 12-10-2018 IPR000644 CBS domain vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 Pfam PF00571 CBS domain 137 187 1.5E-6 T 12-10-2018 IPR000644 CBS domain vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 Gene3D G3DSA:3.30.465.10 196 290 3.0E-31 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 SUPERFAMILY SSF56176 198 280 7.63E-23 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 SMART SM00116 76 125 0.051 T 12-10-2018 IPR000644 CBS domain vfu_A02643 addc398457a4cb0a78964248dfda15fa 291 SMART SM00116 139 187 0.028 T 12-10-2018 IPR000644 CBS domain vfu_A01508 574eea50f9c81d472c307c44356b030c 462 SUPERFAMILY SSF56935 57 462 1.13E-107 T 12-10-2018 vfu_A01508 574eea50f9c81d472c307c44356b030c 462 Gene3D G3DSA:2.40.170.10 55 462 1.3E-144 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 vfu_A01508 574eea50f9c81d472c307c44356b030c 462 Pfam PF02264 LamB porin 59 462 1.9E-99 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_A01508 574eea50f9c81d472c307c44356b030c 462 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 55 9.1E-18 T 12-10-2018 IPR021570 LamB-type porin N-terminal domain vfu_A01508 574eea50f9c81d472c307c44356b030c 462 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 63 458 2.0E-117 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 Pfam PF04542 Sigma-70 region 2 29 95 1.1E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 6.8E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 Gene3D G3DSA:1.10.10.10 113 177 3.6E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 SUPERFAMILY SSF88946 23 111 1.02E-20 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 SUPERFAMILY SSF88659 115 176 4.3E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 Gene3D G3DSA:1.10.1740.10 10 91 1.6E-18 T 12-10-2018 vfu_A02554 e5d9887ae7f784fbd34d44e877f33b30 187 Pfam PF08281 Sigma-70, region 4 119 171 1.0E-11 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A00300 f660a4755c6b061e3980d4f4f23116eb 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.237 T 12-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 vfu_A00300 f660a4755c6b061e3980d4f4f23116eb 82 Gene3D G3DSA:3.30.110.40 5 80 8.7E-27 T 12-10-2018 IPR036868 TusA-like domain superfamily vfu_A00300 f660a4755c6b061e3980d4f4f23116eb 82 SUPERFAMILY SSF64307 9 80 1.31E-23 T 12-10-2018 IPR036868 TusA-like domain superfamily vfu_A00300 f660a4755c6b061e3980d4f4f23116eb 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 12-10-2018 IPR001455 TusA-like domain vfu_A00300 f660a4755c6b061e3980d4f4f23116eb 82 Pfam PF01206 Sulfurtransferase TusA 12 79 8.0E-22 T 12-10-2018 IPR001455 TusA-like domain vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 172 302 3.8E-24 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 SUPERFAMILY SSF58104 101 355 7.32E-34 T 12-10-2018 vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 221 250 6.5E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 270 299 6.5E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 192 219 6.5E-17 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 SMART SM00283 97 362 4.4E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00976 d86c75906394d5d1ec4aea02a2c44708 389 Gene3D G3DSA:1.10.287.950 59 378 8.2E-32 T 12-10-2018 vfu_A03071 ce286cdbdb88c71e5f1c0c9e58297ae7 333 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 1.8E-105 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 vfu_A03071 ce286cdbdb88c71e5f1c0c9e58297ae7 333 SUPERFAMILY SSF53659 4 326 3.36E-111 T 12-10-2018 vfu_A03071 ce286cdbdb88c71e5f1c0c9e58297ae7 333 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 1.6E-126 T 12-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 vfu_A03071 ce286cdbdb88c71e5f1c0c9e58297ae7 333 Gene3D G3DSA:3.40.718.10 1 329 1.6E-120 T 12-10-2018 vfu_A03071 ce286cdbdb88c71e5f1c0c9e58297ae7 333 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 36.002 T 12-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 vfu_A01103 047f8b2b46385c1d1f4c7747a9bacc0f 192 SUPERFAMILY SSF160443 92 174 2.88E-13 T 12-10-2018 IPR036063 Smr domain superfamily vfu_A01103 047f8b2b46385c1d1f4c7747a9bacc0f 192 Gene3D G3DSA:3.30.1370.110 48 180 7.4E-41 T 12-10-2018 vfu_A01103 047f8b2b46385c1d1f4c7747a9bacc0f 192 SMART SM00463 91 174 7.9E-11 T 12-10-2018 IPR002625 Smr domain vfu_A01103 047f8b2b46385c1d1f4c7747a9bacc0f 192 Pfam PF01713 Smr domain 94 174 7.8E-19 T 12-10-2018 IPR002625 Smr domain vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 SUPERFAMILY SSF51690 128 410 1.1E-84 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 177 410 1.2E-79 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 Gene3D G3DSA:3.20.140.10 1 426 2.5E-171 T 12-10-2018 vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 PIRSF PIRSF000484 1 398 1.8E-64 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 412 46.127 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 SUPERFAMILY SSF54675 7 146 9.71E-35 T 12-10-2018 vfu_B01128 391c77f1bfe0361f7ad253889fe96809 435 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 411 1.3E-169 T 12-10-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 250 9.5E-50 T 12-10-2018 vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 SUPERFAMILY SSF51735 3 251 7.22E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 Gene3D G3DSA:3.40.50.720 1 251 5.0E-66 T 12-10-2018 vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.1E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.5E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.5E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.5E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.5E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.5E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00833 d4c9792f89cf62ae69b4df8a6a94dc95 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.5E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01328 abb5b9de20c0b7d838309fdcde1da695 478 Pfam PF00817 impB/mucB/samB family 27 152 3.6E-5 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 vfu_A01328 abb5b9de20c0b7d838309fdcde1da695 478 SUPERFAMILY SSF56672 26 230 1.93E-29 T 12-10-2018 vfu_A01546 35e09a44a8c99973c42fb26adb2f9b29 264 SMART SM00382 31 226 1.9E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01546 35e09a44a8c99973c42fb26adb2f9b29 264 Pfam PF00005 ABC transporter 22 177 2.9E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01546 35e09a44a8c99973c42fb26adb2f9b29 264 Gene3D G3DSA:3.40.50.300 1 255 5.5E-51 T 12-10-2018 vfu_A01546 35e09a44a8c99973c42fb26adb2f9b29 264 SUPERFAMILY SSF52540 2 230 1.09E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01546 35e09a44a8c99973c42fb26adb2f9b29 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 SUPERFAMILY SSF54211 1 181 2.78E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.2E-10 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.4E-111 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 SUPERFAMILY SSF55666 153 236 1.17E-25 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.917 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 Gene3D G3DSA:3.30.230.70 13 238 1.0E-61 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00163 6ae0733f6bcf17fd7b14c264d51f1278 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.2E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A01595 e48ecbd23b4e7187379407d151e3dbd7 203 Gene3D G3DSA:3.40.50.880 1 203 1.9E-74 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A01595 e48ecbd23b4e7187379407d151e3dbd7 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 6.1E-19 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A01595 e48ecbd23b4e7187379407d151e3dbd7 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 1.8E-68 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 vfu_A01595 e48ecbd23b4e7187379407d151e3dbd7 203 SUPERFAMILY SSF52317 4 202 9.77E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A01595 e48ecbd23b4e7187379407d151e3dbd7 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 34.262 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 vfu_A01595 e48ecbd23b4e7187379407d151e3dbd7 203 PIRSF PIRSF000495 3 203 2.5E-65 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 108 1.4E-32 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 118 204 19.668 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 SUPERFAMILY SSF141734 12 122 2.09E-46 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 Gene3D G3DSA:3.10.20.400 2 100 3.3E-37 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 121 208 4.2E-18 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 SUPERFAMILY SSF101386 121 208 2.05E-25 T 12-10-2018 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 11 209 37.948 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 204 5.3E-32 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 Gene3D G3DSA:1.10.287.1080 118 209 3.8E-30 T 12-10-2018 vfu_A01598 44afa23f9e6ab43f0171d64f10e9d842 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 108 5.0E-22 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 vfu_A00820 da01808429519f68e79c199c2c401605 191 Gene3D G3DSA:1.20.120.740 4 191 1.4E-49 T 12-10-2018 vfu_A00820 da01808429519f68e79c199c2c401605 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 25 176 1.4E-12 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 vfu_A00820 da01808429519f68e79c199c2c401605 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 33.22 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 vfu_A00820 da01808429519f68e79c199c2c401605 191 SUPERFAMILY SSF101327 7 178 8.89E-43 T 12-10-2018 IPR036255 YgfB-like superfamily vfu_A00820 da01808429519f68e79c199c2c401605 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 8.7E-38 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 vfu_A00888 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A00888 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A00888 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A00888 cbd6851d4a5605ab7c80cbe2e0b7a171 256 Pfam PF01061 ABC-2 type transporter 8 218 1.5E-40 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 vfu_A00888 cbd6851d4a5605ab7c80cbe2e0b7a171 256 PIRSF PIRSF006648 4 252 1.1E-24 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A02460 92929880f760ab937d88841710975585 698 Gene3D G3DSA:1.10.3720.10 144 415 6.2E-51 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02460 92929880f760ab937d88841710975585 698 Gene3D G3DSA:1.10.3720.10 431 693 6.2E-46 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02460 92929880f760ab937d88841710975585 698 SUPERFAMILY SSF161098 439 679 8.04E-45 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02460 92929880f760ab937d88841710975585 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 213 404 1.0E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02460 92929880f760ab937d88841710975585 698 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 505 682 8.3E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02460 92929880f760ab937d88841710975585 698 SUPERFAMILY SSF161098 150 410 1.42E-41 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 Pfam PF07836 DmpG-like communication domain 274 334 4.2E-31 T 12-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 SUPERFAMILY SSF51569 4 276 7.14E-66 T 12-10-2018 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 SUPERFAMILY SSF89000 288 336 6.28E-19 T 12-10-2018 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 5 336 5.5E-178 T 12-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 Gene3D G3DSA:3.20.20.70 2 268 1.1E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 272 336 1.0E-25 T 12-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 Pfam PF00682 HMGL-like 6 262 2.0E-73 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 Gene3D G3DSA:1.10.8.60 275 337 1.5E-33 T 12-10-2018 vfu_A01971 c7dc15bcfe05b65a35358f58b6cfff77 337 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 337 221.015 T 12-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 vfu_B00671 f54e2b3a0fae211ccb2964dff8724e65 390 SUPERFAMILY SSF141868 142 387 1.44E-63 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00671 f54e2b3a0fae211ccb2964dff8724e65 390 Pfam PF00563 EAL domain 142 376 5.0E-54 T 12-10-2018 IPR001633 EAL domain vfu_B00671 f54e2b3a0fae211ccb2964dff8724e65 390 Gene3D G3DSA:3.20.20.450 139 389 3.5E-64 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00671 f54e2b3a0fae211ccb2964dff8724e65 390 SMART SM00052 136 381 1.1E-48 T 12-10-2018 IPR001633 EAL domain vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 SMART SM00283 361 622 8.7E-72 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 Gene3D G3DSA:3.30.450.20 49 266 4.2E-71 T 12-10-2018 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 SUPERFAMILY SSF103190 55 184 6.8E-17 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 SMART SM00304 292 346 6.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 SMART SM00304 374 441 70.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 589 2.4E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 Gene3D G3DSA:1.10.287.950 292 623 1.1E-68 T 12-10-2018 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 Pfam PF02743 Cache domain 36 254 1.1E-30 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 Gene3D G3DSA:3.30.450.20 62 173 4.2E-71 T 12-10-2018 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 SUPERFAMILY SSF58104 314 621 2.35E-73 T 12-10-2018 vfu_A01158 a4c132b639652d0d4d5c423cf2c14ca8 623 Pfam PF00672 HAMP domain 294 343 1.5E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 Pfam PF00990 Diguanylate cyclase, GGDEF domain 349 493 6.3E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 SUPERFAMILY SSF141868 519 763 6.28E-73 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 Gene3D G3DSA:3.20.20.450 514 767 1.2E-76 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 Gene3D G3DSA:3.30.70.270 344 513 6.9E-42 T 12-10-2018 vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 SUPERFAMILY SSF55073 354 501 5.34E-35 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 SMART SM00052 512 758 2.5E-78 T 12-10-2018 IPR001633 EAL domain vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 SMART SM00267 338 502 6.6E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 345 502 5.7E-31 T 12-10-2018 IPR000160 GGDEF domain vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 Gene3D G3DSA:3.30.450.20 39 192 1.9E-7 T 12-10-2018 vfu_A00791 f5bdaf4a40974ffc4c1fef92162b186e 768 Pfam PF00563 EAL domain 519 753 2.9E-62 T 12-10-2018 IPR001633 EAL domain vfu_A00332 4f5652d8023810aca79a86f97c86238b 94 SMART SM00877 3 79 5.6E-36 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00332 4f5652d8023810aca79a86f97c86238b 94 Gene3D G3DSA:3.30.70.1710 1 94 2.9E-38 T 12-10-2018 vfu_A00332 4f5652d8023810aca79a86f97c86238b 94 Pfam PF00936 BMC domain 4 79 1.0E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00332 4f5652d8023810aca79a86f97c86238b 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 12-10-2018 IPR020808 Bacterial microcompartments protein, conserved site vfu_A00332 4f5652d8023810aca79a86f97c86238b 94 SUPERFAMILY SSF143414 3 90 2.75E-31 T 12-10-2018 IPR037233 CcmK-like superfamily vfu_A00332 4f5652d8023810aca79a86f97c86238b 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 65 4.0E-20 T 12-10-2018 vfu_A00633 3d43c870b7199626920193721f3577a5 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 393 417 1.9E-19 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00633 3d43c870b7199626920193721f3577a5 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 543 557 1.9E-19 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00633 3d43c870b7199626920193721f3577a5 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 428 438 1.9E-19 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00633 3d43c870b7199626920193721f3577a5 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 520 538 1.9E-19 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00633 3d43c870b7199626920193721f3577a5 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 301 311 1.9E-19 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00633 3d43c870b7199626920193721f3577a5 557 SMART SM00965 162 210 2.2E-9 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 vfu_A00633 3d43c870b7199626920193721f3577a5 557 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 137 555 1.2E-162 T 12-10-2018 IPR013355 Type IV pilus secretin PilQ vfu_A00633 3d43c870b7199626920193721f3577a5 557 Gene3D G3DSA:3.30.1370.120 233 300 2.9E-9 T 12-10-2018 IPR038591 NolW-like superfamily vfu_A00633 3d43c870b7199626920193721f3577a5 557 Pfam PF00263 Bacterial type II and III secretion system protein 397 555 1.1E-45 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 vfu_A00633 3d43c870b7199626920193721f3577a5 557 Pfam PF07660 Secretin and TonB N terminus short domain 162 210 6.6E-7 T 12-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 vfu_A00633 3d43c870b7199626920193721f3577a5 557 Gene3D G3DSA:3.55.50.30 116 232 9.1E-37 T 12-10-2018 vfu_A00633 3d43c870b7199626920193721f3577a5 557 Pfam PF03958 Bacterial type II/III secretion system short domain 236 301 1.0E-10 T 12-10-2018 IPR005644 NolW-like vfu_A00633 3d43c870b7199626920193721f3577a5 557 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 501 534 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 vfu_A01581 2954b230460193f92d8b27cb24f4f2f4 148 Pfam PF16036 Chalcone isomerase-like 8 145 3.4E-10 T 12-10-2018 IPR016087 Chalcone isomerase GO:0016872 vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 393 484 7.4E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 Gene3D G3DSA:3.30.565.10 348 483 8.2E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 SMART SM00388 283 350 1.7E-4 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 SUPERFAMILY SSF55874 355 487 7.2E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 339 3.0E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 SMART SM00387 388 486 1.8E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 SUPERFAMILY SSF47384 279 349 9.81E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 Pfam PF11884 Domain of unknown function (DUF3404) 24 282 1.3E-111 T 12-10-2018 IPR021821 Protein of unknown function DUF3404 vfu_B00204 442644f130c2072c90cf56cdc6a8b1d4 491 Gene3D G3DSA:1.10.287.130 290 347 8.2E-18 T 12-10-2018 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 3.2E-89 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.6E-8 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.424 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Gene3D G3DSA:1.10.1670.10 11 203 7.4E-79 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 SMART SM00478 38 185 3.2E-51 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 SMART SM00525 186 206 1.8E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Gene3D G3DSA:1.10.340.30 21 132 7.4E-79 T 12-10-2018 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.6E-18 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 SUPERFAMILY SSF48150 4 207 5.97E-72 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 PIRSF PIRSF001435 1 210 2.6E-51 T 12-10-2018 vfu_A02591 e93ccf4f1b6c39c0a6f609922d5f0b63 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 Gene3D G3DSA:3.30.420.40 2 194 1.6E-75 T 12-10-2018 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 377 389 8.2E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 321 337 8.2E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 298 311 8.2E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 5 16 8.2E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 172 185 8.2E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PRINTS PR00471 Acetate kinase family signature 202 223 8.2E-46 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 2.0E-174 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 190.517 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 SUPERFAMILY SSF53067 3 195 2.33E-65 T 12-10-2018 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 Pfam PF00871 Acetokinase family 5 390 2.2E-167 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 PIRSF PIRSF000722 1 398 1.2E-149 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 Gene3D G3DSA:3.30.420.40 195 397 1.3E-83 T 12-10-2018 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 vfu_A01542 59d6ccad8fbb35b7a495e90bcd711313 398 SUPERFAMILY SSF53067 155 396 1.57E-87 T 12-10-2018 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 Pfam PF00231 ATP synthase 3 285 4.7E-95 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 8.5E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 8.5E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 8.5E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 8.5E-37 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 SUPERFAMILY SSF52943 2 286 7.98E-95 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 35.481 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.7E-107 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 Gene3D G3DSA:3.40.1380.10 61 205 1.8E-107 T 12-10-2018 vfu_B01327 c0651aaafdf6e0a716e696a25e0fbbed 286 Gene3D G3DSA:1.10.287.80 6 282 1.8E-107 T 12-10-2018 vfu_B01155 00ef960889f550835aa57194adb9728c 261 SUPERFAMILY SSF161098 12 258 3.64E-42 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01155 00ef960889f550835aa57194adb9728c 261 Gene3D G3DSA:1.10.3720.10 4 256 6.2E-38 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01155 00ef960889f550835aa57194adb9728c 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 257 9.7E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 Gene3D G3DSA:3.40.50.300 253 491 3.3E-28 T 12-10-2018 vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 SMART SM00382 30 215 1.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 Pfam PF00005 ABC transporter 22 168 2.5E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 Pfam PF00005 ABC transporter 273 428 3.5E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 SUPERFAMILY SSF52540 271 479 8.69E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 Gene3D G3DSA:3.40.50.300 2 236 2.1E-56 T 12-10-2018 vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 SUPERFAMILY SSF52540 4 224 8.64E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00193 45df35b235ad9f16ff007bd96b26ed4b 509 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01401 2c4f0794ab80010ef414c2da7c5ce140 171 Gene3D G3DSA:3.90.79.10 1 167 8.6E-49 T 12-10-2018 vfu_B01401 2c4f0794ab80010ef414c2da7c5ce140 171 SUPERFAMILY SSF55811 2 168 2.71E-46 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_B01401 2c4f0794ab80010ef414c2da7c5ce140 171 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_B01401 2c4f0794ab80010ef414c2da7c5ce140 171 Pfam PF00293 NUDIX domain 35 147 1.8E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A02007 1ac808378c1178ecc64cf842b3618b7c 371 SUPERFAMILY SSF161098 162 352 1.96E-25 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02007 1ac808378c1178ecc64cf842b3618b7c 371 SUPERFAMILY SSF161098 61 130 8.63E-12 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02007 1ac808378c1178ecc64cf842b3618b7c 371 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 203 366 8.3E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02007 1ac808378c1178ecc64cf842b3618b7c 371 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 62 125 3.9E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A02007 1ac808378c1178ecc64cf842b3618b7c 371 Gene3D G3DSA:1.10.3720.10 160 367 1.4E-33 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02007 1ac808378c1178ecc64cf842b3618b7c 371 Gene3D G3DSA:1.10.3720.10 48 155 5.2E-15 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 Gene3D G3DSA:2.40.50.100 1 83 2.2E-22 T 12-10-2018 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 Pfam PF00364 Biotin-requiring enzyme 4 75 3.3E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 SUPERFAMILY SSF51230 2 92 7.2E-25 T 12-10-2018 IPR011053 Single hybrid motif vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 SUPERFAMILY SSF52777 176 381 3.74E-51 T 12-10-2018 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 Gene3D G3DSA:3.30.559.10 165 383 4.7E-47 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 SUPERFAMILY SSF47005 124 167 9.81E-10 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 175 382 4.6E-52 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 Gene3D G3DSA:4.10.320.10 126 164 2.5E-12 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 vfu_B01463 9b38be14b24e67bd08abfa7b78975284 383 Pfam PF02817 e3 binding domain 130 163 4.1E-10 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 Gene3D G3DSA:3.40.640.10 140 359 7.5E-99 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 SUPERFAMILY SSF46785 2 70 6.63E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 SMART SM00345 7 66 2.2E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 Pfam PF00155 Aminotransferase class I and II 146 456 4.3E-33 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 Gene3D G3DSA:3.90.1150.10 98 465 7.5E-99 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 SUPERFAMILY SSF53383 93 467 2.69E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.6E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01453 a422d2a37be5047b952611ccbafeac73 471 Gene3D G3DSA:1.10.10.10 1 68 1.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00250 7baffbe692aa66508ca8bae7345a65bc 262 Gene3D G3DSA:3.40.50.1820 6 237 6.2E-29 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00250 7baffbe692aa66508ca8bae7345a65bc 262 Pfam PF01764 Lipase (class 3) 60 204 1.5E-20 T 12-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 vfu_B00250 7baffbe692aa66508ca8bae7345a65bc 262 SUPERFAMILY SSF53474 9 252 5.07E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 Gene3D G3DSA:3.30.450.20 10 143 6.1E-8 T 12-10-2018 vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 313 3.9E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 SMART SM00267 142 318 5.1E-49 T 12-10-2018 IPR000160 GGDEF domain vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 Gene3D G3DSA:3.30.70.270 144 318 5.2E-46 T 12-10-2018 vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 SUPERFAMILY SSF55785 15 95 1.83E-6 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 149 315 1.4E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 Pfam PF08448 PAS fold 21 136 2.2E-8 T 12-10-2018 IPR013656 PAS fold-4 vfu_A02573 013bc1868f5446a8a3874ca36e482621 318 SUPERFAMILY SSF55073 158 318 4.39E-41 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 SUPERFAMILY SSF90123 165 467 5.89E-51 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 SMART SM00382 517 699 4.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 Gene3D G3DSA:3.40.50.300 484 713 5.5E-71 T 12-10-2018 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 Pfam PF00664 ABC transporter transmembrane region 173 437 1.2E-32 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 Pfam PF00005 ABC transporter 508 655 5.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 SUPERFAMILY SSF52540 486 703 4.24E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 ProSitePatterns PS00211 ABC transporters family signature. 627 641 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 Gene3D G3DSA:3.90.70.10 6 151 7.8E-41 T 12-10-2018 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 Pfam PF03412 Peptidase C39 family 15 142 1.6E-35 T 12-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 vfu_B00740 197989e7f5c515d477c6ae21d80291c2 714 Gene3D G3DSA:1.20.1560.10 158 471 4.2E-52 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A01342 e364e1b869c83654d196041f8c7f8d07 85 Pfam PF00378 Enoyl-CoA hydratase/isomerase 1 79 7.0E-14 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 vfu_A01342 e364e1b869c83654d196041f8c7f8d07 85 SUPERFAMILY SSF52096 1 81 2.61E-15 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A01342 e364e1b869c83654d196041f8c7f8d07 85 Gene3D G3DSA:1.10.12.10 23 73 2.1E-32 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 Pfam PF05175 Methyltransferase small domain 200 373 1.7E-54 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 SUPERFAMILY SSF53335 198 349 4.07E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 PIRSF PIRSF037565 1 377 6.0E-170 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 Gene3D G3DSA:3.40.50.150 187 377 7.0E-47 T 12-10-2018 vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 376 49.24 T 12-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A01026 01c2f97d061eb2ecf765531559bb558d 377 Gene3D G3DSA:3.40.50.150 8 181 1.1E-52 T 12-10-2018 vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 SUPERFAMILY SSF111369 182 294 1.83E-5 T 12-10-2018 vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 Gene3D G3DSA:2.40.50.100 46 78 7.1E-10 T 12-10-2018 vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 Gene3D G3DSA:1.10.287.470 103 172 5.5E-10 T 12-10-2018 vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 272 7.8E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 Gene3D G3DSA:1.10.287.470 79 95 7.1E-10 T 12-10-2018 vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 Gene3D G3DSA:2.40.30.170 215 332 4.3E-23 T 12-10-2018 vfu_A01283 c8b3e399f3f47c37476c6efaff2dac79 352 SUPERFAMILY SSF111369 45 168 7.45E-11 T 12-10-2018 vfu_A01161 6605ab53409a18088aa25af865969f95 292 SUPERFAMILY SSF51569 2 288 4.19E-97 T 12-10-2018 vfu_A01161 6605ab53409a18088aa25af865969f95 292 PIRSF PIRSF001365 1 291 2.0E-89 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 SMART SM01130 1 290 1.3E-136 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 vfu_A01161 6605ab53409a18088aa25af865969f95 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.481 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A01161 6605ab53409a18088aa25af865969f95 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A01161 6605ab53409a18088aa25af865969f95 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 1.7E-116 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A01161 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 2.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 2.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 2.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 2.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 2.2E-108 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01161 6605ab53409a18088aa25af865969f95 292 Gene3D G3DSA:3.20.20.70 1 292 1.0E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02803 b11598237ed97ad8861ab486b2d267be 250 Gene3D G3DSA:3.20.20.380 3 249 3.3E-88 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 vfu_A02803 b11598237ed97ad8861ab486b2d267be 250 SUPERFAMILY SSF110395 4 247 3.66E-74 T 12-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 vfu_A02803 b11598237ed97ad8861ab486b2d267be 250 Pfam PF03932 CutC family 4 205 5.9E-85 T 12-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 vfu_A02803 b11598237ed97ad8861ab486b2d267be 250 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 31.039 T 12-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 SUPERFAMILY SSF54810 397 517 4.71E-51 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.5E-6 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 SUPERFAMILY SSF52402 189 412 8.16E-58 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.5E-155 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 2.8E-7 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 2.8E-7 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 2.8E-7 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Gene3D G3DSA:3.30.300.10 398 517 7.4E-51 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.3E-43 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 4.7E-84 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.0E-6 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.0E-6 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.0E-6 T 12-10-2018 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Gene3D G3DSA:3.40.50.620 202 397 1.4E-74 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Pfam PF02540 NAD synthase 212 284 1.7E-7 T 12-10-2018 IPR022310 NAD/GMP synthase vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 SUPERFAMILY SSF52317 9 200 1.21E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.425 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 2.1E-42 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A02766 25e77b9a54ec23e05c1b7786ba1cbe21 517 Gene3D G3DSA:3.40.50.880 6 201 9.7E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82693 149 336 4.88E-12 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Pfam PF00873 AcrB/AcrD/AcrF family 16 1044 9.7E-161 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82693 47 136 2.88E-18 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:1.20.1640.10 21 520 1.9E-230 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:1.20.1640.10 521 1042 1.9E-230 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82866 303 504 1.57E-37 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:3.30.2090.10 731 821 1.9E-230 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 PRINTS PR00702 Acriflavin resistance protein family signature 370 391 2.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 2.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 PRINTS PR00702 Acriflavin resistance protein family signature 398 422 2.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 2.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 2.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 2.0E-25 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82714 194 275 1.03E-12 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:3.30.70.1440 683 887 1.9E-230 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82866 823 1049 2.62E-42 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:3.30.70.1430 572 682 1.9E-230 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:3.30.70.1320 143 338 1.9E-230 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82714 732 815 2.49E-10 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:3.30.70.1430 47 829 1.9E-230 T 12-10-2018 vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 Gene3D G3DSA:3.30.2090.10 189 280 1.9E-230 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00283 41984df01145103f2a5575b0b240e09c 1053 SUPERFAMILY SSF82693 568 682 9.94E-13 T 12-10-2018 vfu_A01281 161c20fc8cc10f9fd272e97b4ad253f4 160 SUPERFAMILY SSF55811 4 127 4.33E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A01281 161c20fc8cc10f9fd272e97b4ad253f4 160 Pfam PF00293 NUDIX domain 5 122 2.3E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A01281 161c20fc8cc10f9fd272e97b4ad253f4 160 Gene3D G3DSA:3.90.79.10 1 140 2.5E-26 T 12-10-2018 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 Gene3D G3DSA:1.10.8.410 227 279 1.7E-13 T 12-10-2018 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 Gene3D G3DSA:1.20.1330.10 45 168 5.9E-55 T 12-10-2018 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 Pfam PF00669 Bacterial flagellin N-terminal helical region 6 139 3.2E-39 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 279 3.7E-20 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 SUPERFAMILY SSF64518 1 279 3.4E-73 T 12-10-2018 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 PRINTS PR00207 Flagellin signature 37 54 1.7E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 PRINTS PR00207 Flagellin signature 76 95 1.7E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 PRINTS PR00207 Flagellin signature 111 134 1.7E-20 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A02242 01c91e83c48a37fa6a311a9c3e078d19 280 Gene3D G3DSA:1.20.58.1830 7 33 5.9E-55 T 12-10-2018 vfu_A00156 3af55fd1f6e1a37b4150d0bcddafd218 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 3.8E-78 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 vfu_A00156 3af55fd1f6e1a37b4150d0bcddafd218 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site vfu_A00156 3af55fd1f6e1a37b4150d0bcddafd218 224 SUPERFAMILY SSF47781 17 91 7.12E-11 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A00156 3af55fd1f6e1a37b4150d0bcddafd218 224 Gene3D G3DSA:3.40.140.10 101 224 9.2E-44 T 12-10-2018 vfu_A00156 3af55fd1f6e1a37b4150d0bcddafd218 224 Pfam PF04002 RadC-like JAB domain 104 222 3.6E-45 T 12-10-2018 IPR025657 RadC-like JAB domain vfu_A01693 d6f6f55c69f806c54bc4faab500c0af0 356 Gene3D G3DSA:3.40.50.720 9 152 2.1E-26 T 12-10-2018 vfu_A01693 d6f6f55c69f806c54bc4faab500c0af0 356 SUPERFAMILY SSF51735 7 145 2.8E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01693 d6f6f55c69f806c54bc4faab500c0af0 356 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 11 127 9.8E-12 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 Gene3D G3DSA:2.40.30.170 37 267 6.8E-60 T 12-10-2018 vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 Gene3D G3DSA:2.40.50.100 49 189 6.8E-60 T 12-10-2018 vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 Gene3D G3DSA:2.40.420.20 28 324 6.8E-60 T 12-10-2018 vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 261 2.8E-21 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 SUPERFAMILY SSF111369 39 265 1.27E-27 T 12-10-2018 vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 Gene3D G3DSA:1.10.287.470 87 154 6.8E-60 T 12-10-2018 vfu_B00284 99c510a004786fd108c78e85aa3c0c20 334 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 28 326 7.9E-60 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_B00151 08d2f5e1e1e28932406b4b06e57b49a6 163 Pfam PF07883 Cupin domain 71 139 4.7E-12 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B00151 08d2f5e1e1e28932406b4b06e57b49a6 163 SUPERFAMILY SSF51182 40 159 1.93E-31 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00151 08d2f5e1e1e28932406b4b06e57b49a6 163 Gene3D G3DSA:2.60.120.10 31 160 3.7E-42 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 Gene3D G3DSA:2.30.30.30 2 104 2.1E-39 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.7E-39 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 7.6E-23 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 Pfam PF00467 KOW motif 8 37 7.8E-6 T 12-10-2018 IPR005824 KOW vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 SMART SM00739 4 31 3.4E-4 T 12-10-2018 IPR005824 KOW vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 SUPERFAMILY SSF50104 4 101 1.15E-33 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily vfu_A00678 9ff8ee5bd2872c580cec9d249346997f 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.017 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_B01414 2c4c7d17baa83c7b2aa54381745bf530 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 176 5.8E-40 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 vfu_B01414 2c4c7d17baa83c7b2aa54381745bf530 200 SMART SM00855 4 158 5.6E-22 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 vfu_B01414 2c4c7d17baa83c7b2aa54381745bf530 200 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 vfu_B01414 2c4c7d17baa83c7b2aa54381745bf530 200 PIRSF PIRSF000709 1 189 4.8E-16 T 12-10-2018 vfu_B01414 2c4c7d17baa83c7b2aa54381745bf530 200 SUPERFAMILY SSF53254 1 184 5.37E-49 T 12-10-2018 IPR029033 Histidine phosphatase superfamily vfu_B01414 2c4c7d17baa83c7b2aa54381745bf530 200 Gene3D G3DSA:3.40.50.1240 1 190 1.4E-47 T 12-10-2018 IPR029033 Histidine phosphatase superfamily vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 7.4E-51 T 12-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal vfu_A00896 adc0402f1871fda6b6a037886574b793 820 SMART SM00490 226 327 5.1E-13 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00896 adc0402f1871fda6b6a037886574b793 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 12-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 SUPERFAMILY SSF52540 20 338 2.53E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Pfam PF04408 Helicase associated domain (HA2) 388 471 6.9E-10 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Gene3D G3DSA:3.40.50.300 1 179 8.9E-51 T 12-10-2018 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Pfam PF00271 Helicase conserved C-terminal domain 204 326 1.2E-11 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Pfam PF00270 DEAD/DEAH box helicase 8 163 5.0E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 SMART SM00487 2 186 1.4E-12 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Gene3D G3DSA:1.20.120.1080 369 471 1.9E-8 T 12-10-2018 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 SMART SM00847 387 477 1.4E-7 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 PIRSF PIRSF005496 1 819 0.0 T 12-10-2018 vfu_A00896 adc0402f1871fda6b6a037886574b793 820 Gene3D G3DSA:3.40.50.300 180 344 5.8E-50 T 12-10-2018 vfu_A02587 132288370faf6219525a632ce239e714 824 SUPERFAMILY SSF46548 337 445 5.76E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02587 132288370faf6219525a632ce239e714 824 Pfam PF13237 4Fe-4S dicluster domain 377 428 1.7E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A02587 132288370faf6219525a632ce239e714 824 SUPERFAMILY SSF142019 95 302 1.07E-58 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02587 132288370faf6219525a632ce239e714 824 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 778 245.17 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 vfu_A02587 132288370faf6219525a632ce239e714 824 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 1.8E-34 T 12-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain vfu_A02587 132288370faf6219525a632ce239e714 824 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 4.0E-45 T 12-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02587 132288370faf6219525a632ce239e714 824 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02587 132288370faf6219525a632ce239e714 824 Gene3D G3DSA:1.10.1060.10 366 445 4.3E-11 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02587 132288370faf6219525a632ce239e714 824 Pfam PF10531 SLBB domain 296 345 1.2E-8 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02587 132288370faf6219525a632ce239e714 824 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 5.2E-190 T 12-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 vfu_A02587 132288370faf6219525a632ce239e714 824 Gene3D G3DSA:3.40.50.11540 145 259 6.3E-12 T 12-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A00987 c6b0cbd6411137f27de8512da2bb51a3 603 Gene3D G3DSA:1.20.1530.20 4 387 1.9E-14 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A00987 c6b0cbd6411137f27de8512da2bb51a3 603 Pfam PF02254 TrkA-N domain 399 490 1.6E-5 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A00987 c6b0cbd6411137f27de8512da2bb51a3 603 SUPERFAMILY SSF51735 399 493 1.63E-6 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00987 c6b0cbd6411137f27de8512da2bb51a3 603 Gene3D G3DSA:3.40.50.720 397 501 3.6E-9 T 12-10-2018 vfu_A00987 c6b0cbd6411137f27de8512da2bb51a3 603 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 2.5E-32 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 vfu_A02595 b200ffd5032b97c33f95a217fb6be75d 219 Gene3D G3DSA:3.30.420.10 9 216 7.7E-54 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A02595 b200ffd5032b97c33f95a217fb6be75d 219 SUPERFAMILY SSF53098 10 208 4.66E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A02595 b200ffd5032b97c33f95a217fb6be75d 219 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 5.2E-98 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 vfu_A02595 b200ffd5032b97c33f95a217fb6be75d 219 Hamap MF_00157 Ribonuclease T [rnt]. 1 219 116.378 T 12-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 vfu_A02595 b200ffd5032b97c33f95a217fb6be75d 219 SMART SM00479 18 204 4.6E-29 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A02595 b200ffd5032b97c33f95a217fb6be75d 219 Pfam PF00929 Exonuclease 20 195 1.0E-41 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 Pfam PF13654 AAA domain 3 213 1.7E-20 T 12-10-2018 vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 Gene3D G3DSA:3.40.50.300 1 115 7.6E-8 T 12-10-2018 vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 Gene3D G3DSA:3.30.230.10 216 458 6.1E-92 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 239 255 1.3E-11 T 12-10-2018 vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 1.3E-11 T 12-10-2018 vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 322 341 1.3E-11 T 12-10-2018 vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 382 400 1.3E-11 T 12-10-2018 vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 SUPERFAMILY SSF54211 239 431 8.34E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A01922 1042e26de0cf69e6659b81c33761ca0e 472 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 325 430 9.6E-11 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 SUPERFAMILY SSF52096 5 318 6.89E-104 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 3.1E-64 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.1E-163 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 Gene3D G3DSA:3.90.226.10 2 318 1.6E-120 T 12-10-2018 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.655 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 2.3E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 2.3E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 2.3E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 2.3E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 2.3E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A01085 20776a92710605fb30c4e427b7c11a4e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 2.3E-48 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 vfu_A02726 36b69278ae58d665787fd90a85ab4196 121 Gene3D G3DSA:3.30.700.10 1 119 1.2E-12 T 12-10-2018 vfu_A02726 36b69278ae58d665787fd90a85ab4196 121 SUPERFAMILY SSF54523 1 104 8.63E-15 T 12-10-2018 vfu_A02726 36b69278ae58d665787fd90a85ab4196 121 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 16 101 2.5E-15 T 12-10-2018 IPR031982 Type IV minor pilin ComP vfu_B01189 cd79d1325daeefd2c5cc7893d352a68b 1181 Gene3D G3DSA:3.40.50.300 131 326 1.5E-5 T 12-10-2018 vfu_B01189 cd79d1325daeefd2c5cc7893d352a68b 1181 Pfam PF06761 Intracellular multiplication and human macrophage-killing 510 823 4.7E-77 T 12-10-2018 IPR009612 ImcF-related vfu_B01189 cd79d1325daeefd2c5cc7893d352a68b 1181 Pfam PF14331 ImcF-related N-terminal domain 203 459 2.2E-76 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain vfu_B01189 cd79d1325daeefd2c5cc7893d352a68b 1181 SUPERFAMILY SSF52540 117 324 1.83E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01189 cd79d1325daeefd2c5cc7893d352a68b 1181 Pfam PF06744 Type VI secretion protein IcmF C-terminal 931 1129 2.1E-58 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal vfu_B01189 cd79d1325daeefd2c5cc7893d352a68b 1181 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 25 1177 0.0 T 12-10-2018 IPR017731 Type VI secretion system, IcmF vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 532 25.774 T 12-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 350 529 7.3E-73 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 Pfam PF02096 60Kd inner membrane protein 351 530 5.1E-63 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 Gene3D G3DSA:2.70.98.90 61 330 2.2E-89 T 12-10-2018 IPR038221 YidC, periplasmic domain superfamily vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 71 92 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 321 341 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 2 23 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 161 181 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 249 264 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 214 232 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 412 435 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 496 519 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR00701 60kDa inner membrane protein signature 459 481 3.5E-100 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR01900 YidC translocation/secretion protein signature 336 352 5.8E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR01900 YidC translocation/secretion protein signature 465 480 5.8E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 PRINTS PR01900 YidC translocation/secretion protein signature 485 509 5.8E-27 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 349 1.3E-113 T 12-10-2018 IPR028053 Membrane insertase YidC, N-terminal vfu_A00319 82562df9371c8aae42f0aaf89e44d6b4 540 Pfam PF14849 YidC periplasmic domain 66 340 1.1E-84 T 12-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Gene3D G3DSA:3.40.50.800 533 642 1.5E-32 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Gene3D G3DSA:3.30.930.10 224 532 2.3E-129 T 12-10-2018 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 SUPERFAMILY SSF52954 530 637 9.82E-33 T 12-10-2018 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 3.7E-49 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Gene3D G3DSA:3.30.54.20 131 188 1.3E-64 T 12-10-2018 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Pfam PF03129 Anticodon binding domain 542 631 1.4E-22 T 12-10-2018 IPR004154 Anticodon-binding vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 2.7E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 SUPERFAMILY SSF55681 244 527 1.33E-98 T 12-10-2018 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 7.0E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 7.0E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 7.0E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 7.0E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 7.0E-54 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 SUPERFAMILY SSF81271 3 61 5.23E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 SMART SM00863 171 220 1.9E-20 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 6.2E-244 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 SUPERFAMILY SSF55186 65 242 4.06E-63 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Gene3D G3DSA:3.30.980.10 70 223 1.3E-64 T 12-10-2018 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Pfam PF02824 TGS domain 4 61 2.2E-10 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.433 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 vfu_B00041 0646daf5fa5ab94ac2bbdfe5a386e2c4 642 Gene3D G3DSA:3.10.20.30 3 62 3.2E-21 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 326 409 1.6E-36 T 12-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 SMART SM01002 45 210 1.0E-82 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 Gene3D G3DSA:3.40.50.720 2 259 7.3E-85 T 12-10-2018 vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 40 267 1.3E-74 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 1 410 4.7E-229 T 12-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 2 36 3.2E-7 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 SUPERFAMILY SSF51735 36 215 3.08E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00202 69a7e2d5e6d81a5ff1e6e19acb18cdb8 410 Gene3D G3DSA:3.40.50.720 29 218 7.3E-85 T 12-10-2018 vfu_B00242 c8855d099bc95b2c44e1be5be3a12caf 543 Gene3D G3DSA:3.40.50.300 1 330 8.1E-15 T 12-10-2018 vfu_B00242 c8855d099bc95b2c44e1be5be3a12caf 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 1.3E-149 T 12-10-2018 IPR022602 Protein of unknown function DUF2813 vfu_B00242 c8855d099bc95b2c44e1be5be3a12caf 543 SUPERFAMILY SSF52540 1 325 8.64E-16 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Gene3D G3DSA:3.40.1190.10 81 312 3.3E-75 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 32.961 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Pfam PF08245 Mur ligase middle domain 105 294 2.3E-46 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 SUPERFAMILY SSF53244 314 448 2.56E-32 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 SUPERFAMILY SSF63418 1 96 4.58E-25 T 12-10-2018 IPR035911 MurE/MurF, N-terminal vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 390 1.6E-12 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Gene3D G3DSA:3.40.1390.10 1 80 4.9E-27 T 12-10-2018 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Gene3D G3DSA:3.90.190.20 313 453 1.2E-35 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 SUPERFAMILY SSF53623 100 311 1.09E-54 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 Pfam PF01225 Mur ligase family, catalytic domain 24 85 4.0E-9 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 vfu_A02936 3e3380e7e6078b6bf57cb1f4f86edb79 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 7.9E-141 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 4.6E-23 T 12-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Gene3D G3DSA:2.160.10.10 101 309 1.1E-63 T 12-10-2018 vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 330 1.4E-118 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 SUPERFAMILY SSF51161 32 317 4.5E-86 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Gene3D G3DSA:3.40.1390.10 1 99 3.6E-31 T 12-10-2018 vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 145 2.8E-10 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 9.3E-8 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 260 286 0.17 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A01079 e1ac7e71e529ce4cd752a356a2936594 344 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 327 35.303 T 12-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 vfu_A01418 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.30.70.270 497 660 4.2E-34 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 SMART SM00267 491 653 3.3E-25 T 12-10-2018 IPR000160 GGDEF domain vfu_A01418 032d577066d7d380749afae91bd86243 663 SUPERFAMILY SSF53850 34 216 1.14E-24 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 SUPERFAMILY SSF53850 240 461 2.69E-26 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 SUPERFAMILY SSF55073 507 646 4.94E-29 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01418 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 92 177 6.3E-20 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 325 424 3.0E-25 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 34 202 6.3E-20 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 252 450 1.4E-23 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01418 032d577066d7d380749afae91bd86243 663 Gene3D G3DSA:3.40.190.10 254 459 3.0E-25 T 12-10-2018 vfu_A01418 032d577066d7d380749afae91bd86243 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 498 646 1.4E-27 T 12-10-2018 IPR000160 GGDEF domain vfu_A01418 032d577066d7d380749afae91bd86243 663 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 216 2.1E-19 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01418 032d577066d7d380749afae91bd86243 663 SMART SM00062 246 464 1.9E-4 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01418 032d577066d7d380749afae91bd86243 663 SMART SM00062 19 220 1.8E-11 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01418 032d577066d7d380749afae91bd86243 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 503 646 5.0E-29 T 12-10-2018 IPR000160 GGDEF domain vfu_A00012 a469ba4618778423ed9d36b9ad4c17aa 327 PIRSF PIRSF005651 1 326 1.8E-96 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 vfu_A00012 a469ba4618778423ed9d36b9ad4c17aa 327 SMART SM00244 18 218 6.9E-45 T 12-10-2018 IPR001107 Band 7 domain vfu_A00012 a469ba4618778423ed9d36b9ad4c17aa 327 Pfam PF01145 SPFH domain / Band 7 family 22 233 5.8E-29 T 12-10-2018 IPR001107 Band 7 domain vfu_A00012 a469ba4618778423ed9d36b9ad4c17aa 327 SUPERFAMILY SSF117892 56 223 1.57E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily vfu_A00012 a469ba4618778423ed9d36b9ad4c17aa 327 TIGRFAM TIGR01932 hflC: HflC protein 1 318 5.1E-138 T 12-10-2018 IPR010200 HflC GO:0016021|GO:0052547 vfu_A00012 a469ba4618778423ed9d36b9ad4c17aa 327 Gene3D G3DSA:3.30.479.30 53 148 9.5E-9 T 12-10-2018 vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 Gene3D G3DSA:3.10.580.10 201 330 7.7E-41 T 12-10-2018 vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 SMART SM01091 342 420 2.4E-23 T 12-10-2018 IPR005170 Transporter-associated domain vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 Pfam PF00571 CBS domain 278 326 1.9E-5 T 12-10-2018 IPR000644 CBS domain vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 Pfam PF03471 Transporter associated domain 344 419 1.2E-16 T 12-10-2018 IPR005170 Transporter-associated domain vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 SUPERFAMILY SSF54631 192 329 3.79E-25 T 12-10-2018 vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 Pfam PF01595 Domain of unknown function DUF21 13 181 6.9E-50 T 12-10-2018 IPR002550 CNNM, transmembrane domain vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 Gene3D G3DSA:3.30.465.10 340 418 5.7E-26 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 vfu_A02964 b41111d1a37b703d19eb4916adc365c9 424 SUPERFAMILY SSF56176 339 421 2.4E-20 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 Gene3D G3DSA:3.30.360.10 130 316 6.4E-154 T 12-10-2018 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 2.5E-130 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 PIRSF PIRSF000148 4 337 8.1E-134 T 12-10-2018 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 SMART SM00859 6 121 7.4E-43 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.6E-62 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.628 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 Gene3D G3DSA:3.40.50.720 7 330 6.4E-154 T 12-10-2018 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 SUPERFAMILY SSF51735 5 159 3.23E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 1.3E-32 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A01216 823b77c4452b6f1bfe306bfedd4540b9 337 SUPERFAMILY SSF55347 131 320 8.04E-79 T 12-10-2018 vfu_B00618 16f8aa08268b823eeb426b25cc5d6cf5 409 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 212 226 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_B00618 16f8aa08268b823eeb426b25cc5d6cf5 409 Gene3D G3DSA:3.90.1150.10 270 409 1.9E-33 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00618 16f8aa08268b823eeb426b25cc5d6cf5 409 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 17 408 4.9E-105 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_B00618 16f8aa08268b823eeb426b25cc5d6cf5 409 SUPERFAMILY SSF53383 59 409 1.51E-90 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00618 16f8aa08268b823eeb426b25cc5d6cf5 409 PIRSF PIRSF001434 2 409 1.3E-119 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_B00618 16f8aa08268b823eeb426b25cc5d6cf5 409 Gene3D G3DSA:3.40.640.10 12 269 4.9E-77 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 633 662 1.3E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 604 631 1.3E-16 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 Pfam PF02743 Cache domain 51 395 1.9E-13 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 Gene3D G3DSA:3.30.450.20 247 415 2.5E-9 T 12-10-2018 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 Pfam PF00672 HAMP domain 437 486 1.1E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 Gene3D G3DSA:1.10.287.950 436 769 6.9E-58 T 12-10-2018 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 563 733 7.0E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 SUPERFAMILY SSF58104 459 773 8.11E-61 T 12-10-2018 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 SMART SM00304 437 491 3.9E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00627 fbff6340b26f8e36fc5085153b8ef86e 785 SMART SM00283 506 767 1.0E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3021 3039 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 SUPERFAMILY SSF51120 2910 3114 2.2E-23 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 PRINTS PR00313 NodO calcium binding signature 2915 2926 3.4E-9 T 12-10-2018 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 PRINTS PR00313 NodO calcium binding signature 2998 3006 3.4E-9 T 12-10-2018 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 PRINTS PR00313 NodO calcium binding signature 3025 3033 3.4E-9 T 12-10-2018 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 PRINTS PR00313 NodO calcium binding signature 3034 3043 3.4E-9 T 12-10-2018 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3003 3021 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 SMART SM00327 2536 2741 2.9E-13 T 12-10-2018 IPR002035 von Willebrand factor, type A vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 SUPERFAMILY SSF53300 2526 2720 1.3E-20 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Gene3D G3DSA:2.60.40.60 171 276 3.3E-9 T 12-10-2018 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 SUPERFAMILY SSF49313 196 279 1.57E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1132 1230 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 820 918 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 508 606 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1756 1854 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1444 1542 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1548 1646 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 924 1022 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1236 1334 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 612 710 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 300 398 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 404 502 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1028 1126 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1340 1438 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 716 814 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1860 1951 6.3E-28 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1652 1750 5.4E-30 T 12-10-2018 IPR010221 VCBS repeat vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3012 3030 - T 12-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Gene3D G3DSA:3.40.50.410 2538 2739 5.5E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Gene3D G3DSA:2.150.10.10 2995 3135 4.7E-22 T 12-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3006 3023 0.12 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2506 2520 12.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2912 2925 0.093 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3024 3040 0.14 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2991 3005 0.8 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 2311 2318 36.0 T 12-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 vfu_B00340 83ed933bb52dfdccdd5c374d111d583f 3149 Pfam PF13519 von Willebrand factor type A domain 2540 2667 1.6E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A vfu_A02150 704baf4761c52bcd16116ec0dc9d33d5 105 PIRSF PIRSF029143 2 105 1.1E-45 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 vfu_A02150 704baf4761c52bcd16116ec0dc9d33d5 105 Gene3D G3DSA:2.30.130.30 2 104 1.5E-44 T 12-10-2018 vfu_A02150 704baf4761c52bcd16116ec0dc9d33d5 105 Pfam PF04266 ASCH domain 7 103 2.3E-15 T 12-10-2018 IPR007374 ASCH domain vfu_A02150 704baf4761c52bcd16116ec0dc9d33d5 105 SMART SM01022 7 105 9.6E-27 T 12-10-2018 IPR007374 ASCH domain vfu_A02150 704baf4761c52bcd16116ec0dc9d33d5 105 SUPERFAMILY SSF88697 4 104 2.65E-32 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A02150 704baf4761c52bcd16116ec0dc9d33d5 105 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.582 T 12-10-2018 IPR008314 Uncharacterised conserved protein UCP029143 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 SUPERFAMILY SSF102114 105 327 3.14E-12 T 12-10-2018 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 Gene3D G3DSA:1.10.150.530 5 67 2.7E-26 T 12-10-2018 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 PIRSF PIRSF006004 3 367 7.9E-143 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 Gene3D G3DSA:3.20.20.70 68 338 3.6E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 Pfam PF04055 Radical SAM superfamily 109 280 1.3E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 4.9E-160 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 vfu_A02778 bbd49b7d62fb8560580b76c1357dec5f 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.859 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 Gene3D G3DSA:3.40.50.620 1 225 2.0E-86 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 SUPERFAMILY SSF52374 5 326 2.11E-100 T 12-10-2018 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 2.8E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 2.8E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 219 231 2.8E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 186 208 2.8E-30 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 419 3.8E-122 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 Gene3D G3DSA:1.10.240.10 226 328 2.4E-36 T 12-10-2018 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 Gene3D G3DSA:3.10.290.10 329 420 1.1E-23 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 Pfam PF00579 tRNA synthetases class I (W and Y) 32 326 4.9E-82 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 SUPERFAMILY SSF55174 324 418 1.26E-14 T 12-10-2018 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 Pfam PF01479 S4 domain 365 388 6.6E-5 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 419 43.683 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 vfu_B01135 4476d1800b6796069e89f81ebbc9a3f2 420 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02544 d77650d274c75a957e53f2636deb559f 109 SUPERFAMILY SSF82607 11 103 2.62E-36 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily vfu_A02544 d77650d274c75a957e53f2636deb559f 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.43 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family vfu_A02544 d77650d274c75a957e53f2636deb559f 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 3.8E-39 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family vfu_A02544 d77650d274c75a957e53f2636deb559f 109 Gene3D G3DSA:3.30.1310.10 1 109 1.9E-47 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily vfu_A02544 d77650d274c75a957e53f2636deb559f 109 PIRSF PIRSF004555 3 109 4.9E-39 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family vfu_A02544 d77650d274c75a957e53f2636deb559f 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 5.9E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 SMART SM00100 2 122 2.5E-26 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.4E-23 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 Gene3D G3DSA:2.60.120.10 10 138 8.0E-43 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 SUPERFAMILY SSF51206 8 137 1.44E-34 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 12-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 SMART SM00419 160 208 4.2E-17 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 12-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00648 a2b6a5da1222176f28c0a2bce306221f 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 SMART SM00448 15 125 1.5E-36 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 SUPERFAMILY SSF46894 144 245 3.68E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 SMART SM00862 168 244 1.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 Gene3D G3DSA:3.40.50.2300 10 137 4.1E-33 T 12-10-2018 vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 Pfam PF00072 Response regulator receiver domain 17 125 8.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 244 3.8E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 Gene3D G3DSA:1.10.10.10 143 247 2.4E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01624 015f64f70f2098a216c5a6c2cf14bc11 247 SUPERFAMILY SSF52172 10 133 1.14E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00605 06e126d75771966473d0b878e881ed13 808 SUPERFAMILY SSF141729 54 159 6.67E-19 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 vfu_B00605 06e126d75771966473d0b878e881ed13 808 Pfam PF13954 PapC N-terminal domain 33 168 5.2E-32 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 vfu_B00605 06e126d75771966473d0b878e881ed13 808 Pfam PF00577 Outer membrane usher protein 185 726 1.2E-108 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 vfu_B00605 06e126d75771966473d0b878e881ed13 808 Gene3D G3DSA:3.10.20.410 32 144 1.0E-13 T 12-10-2018 vfu_B00605 06e126d75771966473d0b878e881ed13 808 Gene3D G3DSA:2.60.40.3110 254 343 1.5E-25 T 12-10-2018 vfu_B00605 06e126d75771966473d0b878e881ed13 808 Pfam PF13953 PapC C-terminal domain 738 795 5.4E-8 T 12-10-2018 IPR025949 PapC-like, C-terminal domain vfu_B00605 06e126d75771966473d0b878e881ed13 808 Gene3D G3DSA:2.60.40.2610 645 732 5.5E-15 T 12-10-2018 vfu_A01973 7c0e7a69be7283491f5cce27ff21b69d 265 SUPERFAMILY SSF56529 4 258 2.09E-79 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 vfu_A01973 7c0e7a69be7283491f5cce27ff21b69d 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 255 4.9E-20 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 vfu_A01973 7c0e7a69be7283491f5cce27ff21b69d 265 Gene3D G3DSA:3.90.850.10 2 262 1.5E-89 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 Gene3D G3DSA:3.30.565.10 401 556 3.0E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 SMART SM00448 1 115 2.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 193 380 1.4E-35 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 Pfam PF13581 Histidine kinase-like ATPase domain 419 550 4.2E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 SUPERFAMILY SSF52172 1 146 2.42E-29 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 Pfam PF00072 Response regulator receiver domain 3 115 1.3E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 Gene3D G3DSA:3.40.50.12740 1 162 4.4E-31 T 12-10-2018 vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 Gene3D G3DSA:3.60.40.10 163 385 1.9E-36 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 vfu_B00974 dd5a840ea43420b59b29da2d9e55fb62 566 SMART SM00331 165 380 5.4E-17 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 vfu_A02207 8d6ebfb36e66fa90e248a289e82af843 206 SUPERFAMILY SSF55821 1 203 5.8E-66 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily vfu_A02207 8d6ebfb36e66fa90e248a289e82af843 206 Pfam PF01300 Telomere recombination 23 198 2.6E-48 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 vfu_A02207 8d6ebfb36e66fa90e248a289e82af843 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 1.7E-71 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 vfu_A02207 8d6ebfb36e66fa90e248a289e82af843 206 Gene3D G3DSA:3.90.870.10 1 206 1.6E-69 T 12-10-2018 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 SUPERFAMILY SSF55174 19 70 1.07E-8 T 12-10-2018 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 313 3.2E-92 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 Pfam PF01479 S4 domain 20 66 1.0E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 Pfam PF00849 RNA pseudouridylate synthase 103 248 8.6E-32 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 Gene3D G3DSA:3.30.2350.10 95 316 1.7E-81 T 12-10-2018 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 SMART SM00363 20 77 3.2E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 Gene3D G3DSA:3.10.290.10 7 74 5.2E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A01301 1fd830fb8d476597a2f4caaef6a2c298 316 SUPERFAMILY SSF55120 92 313 2.56E-66 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.2E-14 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.4E-75 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 4 17 8.9E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 32 46 8.9E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 173 187 8.9E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 81 97 8.9E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 PRINTS PR00094 Adenylate kinase signature 156 171 8.9E-36 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 Gene3D G3DSA:3.40.50.300 1 214 1.6E-78 T 12-10-2018 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.318 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 SUPERFAMILY SSF52540 1 186 5.54E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02614 28e5e462537f9255faf43fd17e88111c 214 Pfam PF00406 Adenylate kinase 5 185 5.7E-60 T 12-10-2018 vfu_B00769 ee78de30b94cb4fc3dc53f17fd40c701 369 Pfam PF12060 Domain of unknown function (DUF3541) 36 257 3.0E-114 T 12-10-2018 IPR021928 Protein of unknown function DUF3541 vfu_B00386 ab21bbbd7a4034d490f69f97dfd204cb 138 SUPERFAMILY SSF53955 7 134 1.94E-35 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_B00386 ab21bbbd7a4034d490f69f97dfd204cb 138 Gene3D G3DSA:1.10.530.40 5 137 8.1E-44 T 12-10-2018 vfu_B00386 ab21bbbd7a4034d490f69f97dfd204cb 138 Pfam PF00959 Phage lysozyme 28 123 8.5E-5 T 12-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 SUPERFAMILY SSF56235 13 429 2.39E-148 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 5.8E-178 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 SUPERFAMILY SSF69336 1213 1465 7.06E-88 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF01493 GXGXG motif 1237 1419 1.8E-73 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:2.160.20.60 1201 1468 6.8E-101 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 SUPERFAMILY SSF51395 434 1191 9.77E-251 T 12-10-2018 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF04898 Glutamate synthase central domain 458 738 3.0E-104 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 6.0E-153 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02908 64f136776b547d8b3ae17ca78e41fa9c 1487 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 SUPERFAMILY SSF55729 153 288 2.84E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 SMART SM00347 23 123 8.4E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 Gene3D G3DSA:3.40.630.30 144 284 5.1E-12 T 12-10-2018 vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 Pfam PF13673 Acetyltransferase (GNAT) domain 183 285 1.4E-10 T 12-10-2018 IPR000182 GNAT domain vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 Pfam PF01047 MarR family 30 87 2.5E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 SUPERFAMILY SSF46785 20 134 1.2E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00955 c0156ce24223dc749083a9331a9adc14 296 Gene3D G3DSA:1.10.10.10 3 136 1.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 Gene3D G3DSA:3.20.20.70 143 458 1.1E-81 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 PRINTS PR00743 Glycosyl hydrolase family 36 signature 190 205 5.5E-8 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 PRINTS PR00743 Glycosyl hydrolase family 36 signature 349 365 5.5E-8 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 PRINTS PR00743 Glycosyl hydrolase family 36 signature 239 261 5.5E-8 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 PRINTS PR00743 Glycosyl hydrolase family 36 signature 297 312 5.5E-8 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 SUPERFAMILY SSF51445 159 480 9.79E-62 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B00922 e481ab1e9575dfbf70b27d6b649d9d63 553 Pfam PF02065 Melibiase 122 454 9.1E-37 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 206 316 8.1E-23 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 196 9.2E-62 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 Gene3D G3DSA:1.20.272.10 208 320 1.9E-9 T 12-10-2018 vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 SUPERFAMILY SSF52540 5 183 2.54E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 SUPERFAMILY SSF48019 208 320 3.57E-17 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 Pfam PF13177 DNA polymerase III, delta subunit 10 165 4.1E-49 T 12-10-2018 vfu_A01314 e5b1a68bf2443a46eed421c5299f7ef0 321 Gene3D G3DSA:3.40.50.300 3 166 2.3E-52 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 135 330 8.55E-28 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1037 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 567 673 1.15E-32 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82714 183 272 2.75E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82693 38 133 7.85E-26 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.70.1440 671 867 0.0 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.70.1430 38 819 0.0 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.70.1430 569 670 0.0 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82866 296 497 5.49E-50 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:1.20.1640.10 8 514 0.0 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:1.20.1640.10 515 1024 0.0 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82714 724 811 5.62E-24 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 SUPERFAMILY SSF82866 807 1030 1.31E-42 T 12-10-2018 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.3E-111 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00237 99f3a733ed0915fdb4a670ae838c329d 1042 Gene3D G3DSA:3.30.2090.10 723 811 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00583 4b95182de3e788ba2caa962dcec0af1e 105 Hamap MF_00744 Met repressor [metJ]. 1 105 34.758 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 vfu_A00583 4b95182de3e788ba2caa962dcec0af1e 105 SUPERFAMILY SSF47598 3 103 8.45E-57 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 vfu_A00583 4b95182de3e788ba2caa962dcec0af1e 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.1E-59 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 vfu_A00583 4b95182de3e788ba2caa962dcec0af1e 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 5.0E-48 T 12-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 vfu_A00583 4b95182de3e788ba2caa962dcec0af1e 105 Gene3D G3DSA:1.10.140.10 2 105 7.7E-56 T 12-10-2018 IPR023453 Methionine repressor MetJ domain superfamily vfu_A02574 131ada34741e605b8065fda2d4e6c1d0 151 Gene3D G3DSA:3.90.1170.40 1 149 9.7E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 vfu_A02574 131ada34741e605b8065fda2d4e6c1d0 151 Pfam PF02391 MoaE protein 8 119 1.9E-38 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 vfu_A02574 131ada34741e605b8065fda2d4e6c1d0 151 SUPERFAMILY SSF54690 4 149 3.27E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 SMART SM00357 6 70 1.7E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 2.0E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 PRINTS PR00050 Cold shock protein signature 43 61 7.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 PRINTS PR00050 Cold shock protein signature 28 37 7.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 PRINTS PR00050 Cold shock protein signature 7 22 7.4E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 Gene3D G3DSA:2.40.50.140 2 70 5.4E-30 T 12-10-2018 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 PIRSF PIRSF002599 1 70 2.4E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 vfu_B00561 aaf18918175475c8151c29fd3b756445 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 12-10-2018 IPR019844 Cold-shock conserved site vfu_B00561 aaf18918175475c8151c29fd3b756445 70 SUPERFAMILY SSF50249 4 69 1.35E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 235 262 2.9E-17 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 2.9E-17 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 278 294 2.9E-17 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 2.9E-17 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 1.2E-6 T 12-10-2018 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 235 259 1.2E-6 T 12-10-2018 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 1.2E-6 T 12-10-2018 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 1.2E-6 T 12-10-2018 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 Pfam PF00206 Lyase 22 296 2.3E-37 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 SUPERFAMILY SSF48557 13 449 8.8E-88 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 442 8.9E-14 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 ProSitePatterns PS00163 Fumarate lyases signature. 278 287 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 Gene3D G3DSA:1.20.200.10 110 363 1.5E-61 T 12-10-2018 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 Gene3D G3DSA:1.10.40.30 365 453 9.6E-16 T 12-10-2018 vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 Gene3D G3DSA:1.10.275.10 7 109 7.2E-31 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A01701 5ce35dcd530729197084da9a4110afb8 454 SMART SM00998 366 444 9.2E-17 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A02874 aa4fc506349c46bec3b644c146326640 782 SUPERFAMILY SSF141371 466 554 1.57E-5 T 12-10-2018 vfu_A02874 aa4fc506349c46bec3b644c146326640 782 Gene3D G3DSA:2.40.10.220 466 588 5.9E-6 T 12-10-2018 vfu_A02874 aa4fc506349c46bec3b644c146326640 782 Pfam PF07238 PilZ domain 144 248 1.4E-7 T 12-10-2018 IPR009875 PilZ domain GO:0035438 vfu_A02874 aa4fc506349c46bec3b644c146326640 782 Pfam PF07238 PilZ domain 470 553 3.7E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 vfu_A03094 9a764983134d511af83ed10303e38cbc 481 SUPERFAMILY SSF111283 18 480 6.02E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 vfu_A03094 9a764983134d511af83ed10303e38cbc 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 4.3E-65 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 vfu_A03094 9a764983134d511af83ed10303e38cbc 481 PIRSF PIRSF004919 15 481 4.9E-142 T 12-10-2018 IPR025502 TldD vfu_A03094 9a764983134d511af83ed10303e38cbc 481 Gene3D G3DSA:3.30.2290.10 9 237 3.9E-15 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal vfu_B00785 6d6329971e747dace33d3f0f5e491091 244 Gene3D G3DSA:3.40.190.10 42 238 4.5E-12 T 12-10-2018 vfu_B00785 6d6329971e747dace33d3f0f5e491091 244 SUPERFAMILY SSF53850 32 242 2.09E-18 T 12-10-2018 vfu_B00785 6d6329971e747dace33d3f0f5e491091 244 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 220 3.6E-7 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00785 6d6329971e747dace33d3f0f5e491091 244 Gene3D G3DSA:3.40.190.10 118 213 4.5E-12 T 12-10-2018 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 533 893 9.7E-65 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.90.1150.10 562 950 6.6E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.40.640.10 576 844 6.6E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.90.1150.10 38 462 2.9E-129 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:3.40.640.10 87 355 2.9E-129 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Gene3D G3DSA:1.20.1650.10 463 561 2.0E-44 T 12-10-2018 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 SUPERFAMILY SSF53383 42 464 6.68E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 SUPERFAMILY SSF53383 513 959 1.15E-111 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 Pfam PF00202 Aminotransferase class-III 50 464 1.4E-93 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 780 801 - T 12-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 vfu_A01724 7e11bd4e1293af4bedf16b4527cfb746 961 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 34 465 1.4E-156 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 7.6E-65 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.6E-28 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.6E-28 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.6E-28 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.6E-28 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.6E-28 T 12-10-2018 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 SUPERFAMILY SSF51905 1 360 3.53E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 PIRSF PIRSF000350 1 445 2.2E-80 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.7E-211 T 12-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 Gene3D G3DSA:3.30.390.30 339 451 4.9E-46 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 Gene3D G3DSA:3.50.50.60 144 261 1.5E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.4E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 Gene3D G3DSA:3.50.50.60 5 315 1.5E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 2.6E-31 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 vfu_A00233 4c84f9f5acdd2947dc6c60551f23c99a 451 SUPERFAMILY SSF55424 337 451 1.63E-33 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 Gene3D G3DSA:2.60.120.10 3 81 2.8E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 SUPERFAMILY SSF46689 193 240 3.58E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 Pfam PF12833 Helix-turn-helix domain 163 238 3.9E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 Gene3D G3DSA:1.10.10.60 143 241 9.9E-26 T 12-10-2018 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 2.8E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 SUPERFAMILY SSF51182 15 165 1.16E-12 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 SMART SM00342 156 238 2.5E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00736 bc4921f4c20e6eaf5fc94d3acba1b6e7 243 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 193 234 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A02080 a721619f643e84ccdd7d6411bc0cc822 71 ProSitePatterns PS00195 Glutaredoxin active site. 1 17 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 vfu_A02080 a721619f643e84ccdd7d6411bc0cc822 71 SUPERFAMILY SSF52833 1 64 1.35E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02080 a721619f643e84ccdd7d6411bc0cc822 71 Gene3D G3DSA:3.40.30.10 1 68 1.3E-14 T 12-10-2018 vfu_A02080 a721619f643e84ccdd7d6411bc0cc822 71 Pfam PF00462 Glutaredoxin 1 54 6.2E-11 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 vfu_B00150 5f731841430d429fd68d2fc8d1685792 240 SUPERFAMILY SSF69118 27 238 1.44E-48 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B00150 5f731841430d429fd68d2fc8d1685792 240 Gene3D G3DSA:1.20.1290.10 15 239 3.8E-59 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B00150 5f731841430d429fd68d2fc8d1685792 240 Pfam PF02627 Carboxymuconolactone decarboxylase family 19 94 6.8E-11 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B00150 5f731841430d429fd68d2fc8d1685792 240 Pfam PF02627 Carboxymuconolactone decarboxylase family 149 233 1.3E-14 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 SUPERFAMILY SSF161098 29 282 5.14E-44 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 SUPERFAMILY SSF161098 311 544 4.45E-29 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 391 544 2.4E-6 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 285 2.8E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 31 571 2.4E-243 T 12-10-2018 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 Gene3D G3DSA:1.10.3720.10 306 565 1.7E-26 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00119 165de8407775e26baf68f9aee8d7cf35 571 Gene3D G3DSA:1.10.3720.10 25 288 9.0E-50 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00650 385baded899a129802934359c77563c9 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 15 230 6.2E-43 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 vfu_B00650 385baded899a129802934359c77563c9 264 Gene3D G3DSA:1.10.800.10 1 264 7.4E-94 T 12-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 vfu_B00650 385baded899a129802934359c77563c9 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 13 253 1.5E-94 T 12-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 vfu_B00650 385baded899a129802934359c77563c9 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 73 95 3.6E-10 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 vfu_B00650 385baded899a129802934359c77563c9 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 209 228 3.6E-10 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 vfu_B00650 385baded899a129802934359c77563c9 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 177 195 3.6E-10 T 12-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 vfu_B00650 385baded899a129802934359c77563c9 264 SUPERFAMILY SSF56534 3 256 2.62E-93 T 12-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily vfu_B00650 385baded899a129802934359c77563c9 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 116 127 - T 12-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 666 3.3E-147 T 12-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 2.9E-47 T 12-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 SUPERFAMILY SSF51905 265 664 7.77E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 661 27.401 T 12-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.50.50.60 265 663 1.8E-129 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.30.9.10 349 573 1.8E-129 T 12-10-2018 vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 Gene3D G3DSA:3.40.50.150 7 251 3.1E-105 T 12-10-2018 vfu_A01212 e8840b652a0fb226ff75513a586a346b 672 Pfam PF01266 FAD dependent oxidoreductase 265 636 3.3E-44 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.2E-115 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 Gene3D G3DSA:3.40.50.1370 8 304 1.8E-119 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 6.0E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 1.2E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 1.2E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 1.2E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 1.2E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 1.2E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 1.2E-37 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.5E-31 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.7E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.7E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 1.7E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.7E-26 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 SUPERFAMILY SSF53671 4 306 1.44E-101 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 Gene3D G3DSA:3.40.50.1370 135 292 1.8E-119 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00559 3100f55fff0912c6e687b413006471dc 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.671 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_B00021 95b09362f481f03c46eaab0db34a3bfd 204 Gene3D G3DSA:2.160.10.10 1 191 2.8E-68 T 12-10-2018 vfu_B00021 95b09362f481f03c46eaab0db34a3bfd 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 4.0E-12 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_B00021 95b09362f481f03c46eaab0db34a3bfd 204 Pfam PF12464 Maltose acetyltransferase 6 57 2.4E-16 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_B00021 95b09362f481f03c46eaab0db34a3bfd 204 SUPERFAMILY SSF51161 2 183 9.7E-52 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_B00021 95b09362f481f03c46eaab0db34a3bfd 204 SMART SM01266 4 58 5.8E-19 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_B01335 745b14f66b0cae47e541022a74ecf3fe 204 SUPERFAMILY SSF56925 36 204 7.06E-15 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_B01335 745b14f66b0cae47e541022a74ecf3fe 204 Gene3D G3DSA:2.40.160.20 33 204 5.5E-13 T 12-10-2018 vfu_B01335 745b14f66b0cae47e541022a74ecf3fe 204 Pfam PF13505 Outer membrane protein beta-barrel domain 9 204 4.2E-14 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:1.20.58.1480 119 244 1.2E-44 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 3.0E-98 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 SMART SM00382 347 491 6.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 SUPERFAMILY SSF88697 10 200 9.44E-48 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 SUPERFAMILY SSF52540 313 586 8.33E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:3.30.230.10 584 771 5.2E-84 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:1.10.8.60 490 583 9.1E-33 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 3.9E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.848 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:3.40.50.300 312 489 1.2E-60 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 1.4E-41 T 12-10-2018 IPR003111 Lon, substrate-binding domain vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 SUPERFAMILY SSF54211 594 770 2.2E-58 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 PIRSF PIRSF001174 1 774 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 770 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 SMART SM00464 10 201 1.5E-73 T 12-10-2018 IPR003111 Lon, substrate-binding domain vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 Gene3D G3DSA:2.30.130.40 1 116 9.7E-37 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 3.6E-56 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 3.6E-56 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 3.6E-56 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 3.6E-56 T 12-10-2018 vfu_A02428 c7944257454bd59b3e840c331e96eb79 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 3.6E-56 T 12-10-2018 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 Gene3D G3DSA:3.30.300.30 137 239 1.2E-11 T 12-10-2018 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 Pfam PF08345 Flagellar M-ring protein C-terminal 273 427 1.2E-36 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 Pfam PF01514 Secretory protein of YscJ/FliF family 48 239 7.8E-62 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 PIRSF PIRSF004862 21 570 1.3E-123 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 39 568 1.8E-72 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 139 157 4.7E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 357 381 4.7E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 171 185 4.7E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 286 304 4.7E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A01405 5c41808fa94e3409a9b5a676068f27d3 579 PRINTS PR01009 Flagellar M-ring protein signature 215 233 4.7E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 SMART SM00345 14 73 4.1E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 Gene3D G3DSA:3.40.640.10 99 451 2.7E-99 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 SUPERFAMILY SSF53383 99 459 7.72E-78 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 SUPERFAMILY SSF46785 5 76 5.14E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.1E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 Gene3D G3DSA:1.10.10.10 10 98 6.8E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.9E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.9E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00015 be18b2eef55755a39e0879d85c9e60d5 459 Pfam PF00155 Aminotransferase class I and II 117 423 9.7E-17 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 SUPERFAMILY SSF50331 236 362 9.48E-33 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 SMART SM00382 28 211 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 Gene3D G3DSA:2.40.50.100 239 361 4.1E-49 T 12-10-2018 vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 SUPERFAMILY SSF52540 4 244 2.73E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 Gene3D G3DSA:2.40.50.140 287 344 4.1E-49 T 12-10-2018 vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 Gene3D G3DSA:3.40.50.300 1 238 3.6E-75 T 12-10-2018 vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 Pfam PF08402 TOBE domain 281 353 3.0E-11 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_B01261 0381497ae1c6f17f6ab53f85395629da 374 Pfam PF00005 ABC transporter 20 161 4.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 SUPERFAMILY SSF55174 5 98 1.85E-15 T 12-10-2018 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 Gene3D G3DSA:3.30.70.1560 132 205 3.2E-53 T 12-10-2018 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 Pfam PF00849 RNA pseudouridylate synthase 67 193 2.2E-13 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 SUPERFAMILY SSF55120 66 227 2.88E-38 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 Pfam PF01479 S4 domain 8 51 2.2E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 Gene3D G3DSA:3.30.70.580 69 227 3.2E-53 T 12-10-2018 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 SMART SM00363 7 69 1.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 Gene3D G3DSA:3.10.290.10 5 68 5.0E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A01102 86810a169eeb5f428e0ef5ff0a0ad29b 347 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 4.0E-47 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A02735 77aad92156aeffac4b07fe007cf2391d 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 9.1E-31 T 12-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 vfu_A02735 77aad92156aeffac4b07fe007cf2391d 144 Gene3D G3DSA:3.30.530.20 1 143 5.5E-38 T 12-10-2018 IPR023393 START-like domain superfamily vfu_A02735 77aad92156aeffac4b07fe007cf2391d 144 SUPERFAMILY SSF55961 1 142 2.96E-33 T 12-10-2018 vfu_A01157 68aed10288685e64a7e0cce496392ba3 357 Pfam PF01594 AI-2E family transporter 20 345 7.0E-77 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like vfu_A01372 302132fcf901603717747c50891162d9 279 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 279 51.285 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 vfu_A01372 302132fcf901603717747c50891162d9 279 Gene3D G3DSA:2.60.120.10 11 265 2.2E-110 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01372 302132fcf901603717747c50891162d9 279 Gene3D G3DSA:2.60.120.520 30 145 2.2E-110 T 12-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 vfu_A01372 302132fcf901603717747c50891162d9 279 PIRSF PIRSF006625 1 279 2.2E-118 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 vfu_A01372 302132fcf901603717747c50891162d9 279 SUPERFAMILY SSF51182 1 263 8.3E-97 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A01372 302132fcf901603717747c50891162d9 279 Pfam PF04962 KduI/IolB family 71 272 3.8E-32 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 vfu_B00153 3265377afee9520f01a575dfa734d5df 203 Pfam PF00486 Transcriptional regulatory protein, C terminal 29 105 3.7E-18 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00153 3265377afee9520f01a575dfa734d5df 203 SMART SM00862 28 105 6.1E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00153 3265377afee9520f01a575dfa734d5df 203 SUPERFAMILY SSF46894 5 107 3.97E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00153 3265377afee9520f01a575dfa734d5df 203 Gene3D G3DSA:1.10.10.10 3 107 2.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00017 e0a8b2c5feba17eb7c26ff92e750d326 356 Pfam PF00578 AhpC/TSA family 49 163 9.3E-20 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_B00017 e0a8b2c5feba17eb7c26ff92e750d326 356 SUPERFAMILY SSF52833 208 347 2.57E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00017 e0a8b2c5feba17eb7c26ff92e750d326 356 SUPERFAMILY SSF52833 48 186 1.56E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00017 e0a8b2c5feba17eb7c26ff92e750d326 356 Pfam PF08534 Redoxin 210 352 1.6E-6 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 vfu_B00017 e0a8b2c5feba17eb7c26ff92e750d326 356 Gene3D G3DSA:3.40.30.10 34 199 8.5E-42 T 12-10-2018 vfu_B00017 e0a8b2c5feba17eb7c26ff92e750d326 356 Gene3D G3DSA:3.40.30.10 208 356 2.2E-21 T 12-10-2018 vfu_A02667 1556ed263ff46c82af78f10e3dbeb3bd 499 Pfam PF05231 MASE1 16 276 2.0E-16 T 12-10-2018 IPR007895 MASE1 vfu_A02667 1556ed263ff46c82af78f10e3dbeb3bd 499 Pfam PF07730 Histidine kinase 304 368 4.4E-11 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 vfu_A02667 1556ed263ff46c82af78f10e3dbeb3bd 499 SUPERFAMILY SSF55874 372 497 1.44E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02667 1556ed263ff46c82af78f10e3dbeb3bd 499 Gene3D G3DSA:3.30.565.10 372 498 8.4E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02667 1556ed263ff46c82af78f10e3dbeb3bd 499 SMART SM00387 407 499 4.3E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02667 1556ed263ff46c82af78f10e3dbeb3bd 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 497 3.4E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01230 12f990df7332047d6a6a4b76f37f436e 70 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 64 8.0E-12 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01230 12f990df7332047d6a6a4b76f37f436e 70 Gene3D G3DSA:1.20.1300.10 1 70 8.0E-19 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01230 12f990df7332047d6a6a4b76f37f436e 70 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 26 39 - T 12-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01230 12f990df7332047d6a6a4b76f37f436e 70 SUPERFAMILY SSF81343 4 70 3.05E-16 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01230 12f990df7332047d6a6a4b76f37f436e 70 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 68 1.2E-18 T 12-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 SMART SM00357 90 152 1.6E-13 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 Pfam PF08206 Ribonuclease B OB domain 91 151 1.7E-21 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 Pfam PF00773 RNB domain 267 347 3.6E-31 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 SUPERFAMILY SSF50249 194 347 2.17E-53 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 SUPERFAMILY SSF50249 71 154 7.42E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 SMART SM00955 267 364 8.9E-6 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 Pfam PF08461 Ribonuclease R winged-helix domain 26 88 1.2E-12 T 12-10-2018 IPR013668 Ribonuclease R winged-helix domain vfu_A00663 fc484b72d9629f6b55fd22807d040588 364 Gene3D G3DSA:2.40.50.140 77 155 8.3E-12 T 12-10-2018 vfu_B00680 5503578003bae5259704b7311b08f298 180 Pfam PF07152 YaeQ protein 1 171 1.4E-68 T 12-10-2018 IPR009822 YaeQ vfu_B00680 5503578003bae5259704b7311b08f298 180 PIRSF PIRSF011484 1 178 4.8E-65 T 12-10-2018 IPR009822 YaeQ vfu_B00680 5503578003bae5259704b7311b08f298 180 SUPERFAMILY SSF52980 2 176 6.7E-65 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_B00680 5503578003bae5259704b7311b08f298 180 SMART SM01322 1 174 9.4E-96 T 12-10-2018 IPR009822 YaeQ vfu_B00680 5503578003bae5259704b7311b08f298 180 Gene3D G3DSA:3.10.640.10 1 177 8.3E-67 T 12-10-2018 IPR038590 YaeQ superfamily vfu_B01457 416abaf9e0ad21754942a374a5231eb4 286 SUPERFAMILY SSF47616 116 258 8.16E-33 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_B01457 416abaf9e0ad21754942a374a5231eb4 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 55 126 7.6E-6 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_B01457 416abaf9e0ad21754942a374a5231eb4 286 Gene3D G3DSA:3.40.30.10 17 254 4.4E-112 T 12-10-2018 vfu_B01457 416abaf9e0ad21754942a374a5231eb4 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 5.8E-9 T 12-10-2018 vfu_B01457 416abaf9e0ad21754942a374a5231eb4 286 SUPERFAMILY SSF52833 37 131 2.39E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B01457 416abaf9e0ad21754942a374a5231eb4 286 Gene3D G3DSA:1.20.1050.10 132 248 4.4E-112 T 12-10-2018 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 PIRSF PIRSF036431 1 689 5.4E-180 T 12-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 SMART SM00091 312 379 1.7E-4 T 12-10-2018 IPR000014 PAS domain vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 Pfam PF13426 PAS domain 323 426 6.1E-7 T 12-10-2018 IPR000014 PAS domain vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 Gene3D G3DSA:1.10.287.130 445 531 2.1E-13 T 12-10-2018 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 664 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 683 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 643 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 629 3.7E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 Gene3D G3DSA:3.30.565.10 537 686 1.4E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 SMART SM00387 576 686 7.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 SUPERFAMILY SSF55874 538 682 5.76E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 SMART SM00086 388 428 0.0019 T 12-10-2018 IPR001610 PAC motif vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 SUPERFAMILY SSF55785 300 426 1.33E-14 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 577 684 8.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 SUPERFAMILY SSF47384 456 531 2.35E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 Gene3D G3DSA:3.30.450.20 57 172 4.3E-10 T 12-10-2018 vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 434 2.7E-13 T 12-10-2018 IPR000014 PAS domain vfu_B01210 ee504ad9a7e3a30fb7caca30c9c1b166 690 Gene3D G3DSA:3.30.450.20 315 444 1.2E-15 T 12-10-2018 vfu_A00668 de5d83c46bdf6c9fe5251231facc31d7 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 2.1E-76 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00668 de5d83c46bdf6c9fe5251231facc31d7 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.2E-65 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 vfu_A00668 de5d83c46bdf6c9fe5251231facc31d7 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 34.057 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00668 de5d83c46bdf6c9fe5251231facc31d7 200 Gene3D G3DSA:3.40.1370.10 5 200 1.5E-69 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A00668 de5d83c46bdf6c9fe5251231facc31d7 200 SUPERFAMILY SSF52166 8 199 1.01E-73 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 Gene3D G3DSA:3.90.1150.10 60 449 1.2E-114 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 Pfam PF00202 Aminotransferase class-III 57 449 5.5E-84 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 Gene3D G3DSA:3.40.640.10 89 348 1.2E-114 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 PIRSF PIRSF000521 16 158 0.0015 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 PIRSF PIRSF000521 150 452 7.8E-23 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 265 302 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00115 d989fe2906d8aac409f88b12f56ac26d 463 SUPERFAMILY SSF53383 58 452 1.89E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01250 9bff082376e07a447c3b792b7dc6ef16 83 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 1.9E-27 T 12-10-2018 IPR009778 Modulator of Rho-dependent transcription termination vfu_B01250 9bff082376e07a447c3b792b7dc6ef16 83 SUPERFAMILY SSF101744 1 81 6.8E-19 T 12-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 vfu_B01250 9bff082376e07a447c3b792b7dc6ef16 83 Gene3D G3DSA:2.30.30.400 2 82 3.1E-13 T 12-10-2018 IPR038626 Rof-like superfamily vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 190 8.7E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 SMART SM00421 133 190 8.1E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 134 180 0.004 T 12-10-2018 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 Gene3D G3DSA:3.40.50.12740 1 196 2.4E-59 T 12-10-2018 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 SUPERFAMILY SSF52172 3 118 6.12E-30 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 SMART SM00448 1 103 3.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 Pfam PF00072 Response regulator receiver domain 2 104 8.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 6.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 6.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 6.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 SUPERFAMILY SSF46894 127 196 5.1E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B01444 483785418d2f52d981ed99c23221f3e6 197 ProSitePatterns PS00622 LuxR-type HTH domain signature. 150 177 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02408 aca66354ae12480df92ff85e089493be 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 139.538 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 vfu_A02408 aca66354ae12480df92ff85e089493be 279 SUPERFAMILY SSF48008 79 270 1.31E-57 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A02408 aca66354ae12480df92ff85e089493be 279 Gene3D G3DSA:1.20.120.530 80 150 4.1E-7 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A02408 aca66354ae12480df92ff85e089493be 279 Gene3D G3DSA:1.20.120.530 153 278 6.8E-27 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A02408 aca66354ae12480df92ff85e089493be 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 6.0E-118 T 12-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 vfu_A02408 aca66354ae12480df92ff85e089493be 279 SMART SM00345 12 71 1.6E-22 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02408 aca66354ae12480df92ff85e089493be 279 SUPERFAMILY SSF46785 12 74 8.1E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02408 aca66354ae12480df92ff85e089493be 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02408 aca66354ae12480df92ff85e089493be 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02408 aca66354ae12480df92ff85e089493be 279 Pfam PF07840 FadR C-terminal domain 72 274 2.7E-68 T 12-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 vfu_A02408 aca66354ae12480df92ff85e089493be 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.1E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02408 aca66354ae12480df92ff85e089493be 279 Gene3D G3DSA:1.10.10.10 1 79 1.3E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01682 67343eebad7ecca046e133188e1ec859 365 Pfam PF12698 ABC-2 family transporter protein 24 355 5.9E-47 T 12-10-2018 vfu_A01682 67343eebad7ecca046e133188e1ec859 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 3.2E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A01682 67343eebad7ecca046e133188e1ec859 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 3.2E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A01682 67343eebad7ecca046e133188e1ec859 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 3.2E-6 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 222 236 4.1E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 175 190 4.1E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 201 217 4.1E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 238 252 4.1E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 PRINTS PR01008 Flagellar L-ring protein signature 103 115 4.1E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 259 27.728 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01127 6ce3c26cc3c41d567cc3417d17fcbe74 259 Pfam PF02107 Flagellar L-ring protein 81 256 2.5E-57 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A02087 8484eff70245afbfa2ae067c11bfd7da 549 Pfam PF00672 HAMP domain 220 269 5.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02087 8484eff70245afbfa2ae067c11bfd7da 549 SMART SM00283 287 548 3.1E-25 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02087 8484eff70245afbfa2ae067c11bfd7da 549 SMART SM00304 218 272 3.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02087 8484eff70245afbfa2ae067c11bfd7da 549 SUPERFAMILY SSF58104 240 549 2.35E-54 T 12-10-2018 vfu_A02087 8484eff70245afbfa2ae067c11bfd7da 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 515 7.8E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02087 8484eff70245afbfa2ae067c11bfd7da 549 Gene3D G3DSA:1.10.287.950 219 549 1.5E-55 T 12-10-2018 vfu_B00580 ce1092c20646b4d4b271bcfdaea21d73 579 SUPERFAMILY SSF58104 269 578 2.35E-72 T 12-10-2018 vfu_B00580 ce1092c20646b4d4b271bcfdaea21d73 579 Pfam PF00672 HAMP domain 251 297 1.2E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00580 ce1092c20646b4d4b271bcfdaea21d73 579 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 367 544 4.7E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00580 ce1092c20646b4d4b271bcfdaea21d73 579 SMART SM00283 313 577 2.8E-63 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00580 ce1092c20646b4d4b271bcfdaea21d73 579 Gene3D G3DSA:1.10.287.950 249 579 4.6E-69 T 12-10-2018 vfu_B00580 ce1092c20646b4d4b271bcfdaea21d73 579 SMART SM00304 247 301 5.9E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 Gene3D G3DSA:3.40.50.1000 2 310 3.9E-177 T 12-10-2018 IPR023214 HAD superfamily vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 SUPERFAMILY SSF56784 103 310 1.11E-48 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 7.0E-26 T 12-10-2018 vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 Gene3D G3DSA:3.30.70.2020 8 322 3.9E-177 T 12-10-2018 vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 6.6E-14 T 12-10-2018 vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 102 310 4.1E-82 T 12-10-2018 vfu_A02875 bc4c06df17923e5a128e38db9e690283 326 Gene3D G3DSA:1.10.150.210 115 177 3.9E-177 T 12-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 vfu_B00837 14e75381fdcefa37e1879490bbe6778f 255 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00837 14e75381fdcefa37e1879490bbe6778f 255 SUPERFAMILY SSF52540 3 227 5.43E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00837 14e75381fdcefa37e1879490bbe6778f 255 SMART SM00382 27 215 2.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00837 14e75381fdcefa37e1879490bbe6778f 255 Pfam PF00005 ABC transporter 19 166 1.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00837 14e75381fdcefa37e1879490bbe6778f 255 Gene3D G3DSA:3.40.50.300 2 253 1.0E-68 T 12-10-2018 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 5.0E-22 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 SUPERFAMILY SSF55252 82 151 3.92E-19 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.32 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 Gene3D G3DSA:3.30.1360.40 75 156 1.2E-34 T 12-10-2018 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 Pfam PF01316 Arginine repressor, DNA binding domain 7 74 7.4E-23 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 3.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 3.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 3.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 3.5E-23 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 9.5E-43 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 SUPERFAMILY SSF46785 3 77 5.53E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 Gene3D G3DSA:1.10.10.10 1 74 5.2E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A03085 8f183f31af1d9d79ec853983778713c1 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 2.1E-21 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:3.30.1360.40 236 332 2.5E-236 T 12-10-2018 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.694 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 SUPERFAMILY SSF56719 30 520 1.57E-187 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 SUPERFAMILY SSF101904 532 852 2.75E-113 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 839 0.0 T 12-10-2018 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 SMART SM00434 11 498 4.9E-301 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.2E-158 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:1.10.268.10 369 492 2.5E-236 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 2.6E-8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 688 3.9E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 1.2E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 9.9E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 786 4.2E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 1.6E-12 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:2.120.10.90 534 840 5.3E-127 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal vfu_A01742 d71a4a0c49a83d4e0ec2daca43bdd84b 877 Gene3D G3DSA:3.90.199.10 33 520 2.5E-236 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 vfu_B00803 323fea4b9da73c7a2b45e3738deedccc 93 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 93 24.667 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 vfu_B00803 323fea4b9da73c7a2b45e3738deedccc 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.0E-33 T 12-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 vfu_B00803 323fea4b9da73c7a2b45e3738deedccc 93 Gene3D G3DSA:2.60.120.10 1 93 3.3E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00803 323fea4b9da73c7a2b45e3738deedccc 93 SUPERFAMILY SSF51182 1 93 1.33E-34 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00995 d4e19f3a1fbb67bbd00e18cc957bdd1f 88 Pfam PF11391 Protein of unknown function (DUF2798) 12 70 9.0E-18 T 12-10-2018 IPR021529 Protein of unknown function DUF2798 vfu_A00169 32f0a992cf9dbde48748da97132a3539 145 Pfam PF10980 Protein of unknown function (DUF2787) 14 139 1.3E-41 T 12-10-2018 IPR021248 Protein of unknown function DUF2787 vfu_A00169 32f0a992cf9dbde48748da97132a3539 145 Gene3D G3DSA:3.10.450.430 1 141 1.5E-30 T 12-10-2018 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 SMART SM00363 3 73 3.8E-9 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 Pfam PF01479 S4 domain 4 42 6.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 3.9E-55 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 Gene3D G3DSA:3.30.70.580 70 228 2.1E-48 T 12-10-2018 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 Pfam PF00849 RNA pseudouridylate synthase 68 203 6.2E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 SUPERFAMILY SSF55174 4 96 4.21E-12 T 12-10-2018 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 Gene3D G3DSA:3.10.290.10 1 59 5.4E-20 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 SUPERFAMILY SSF55120 68 236 5.96E-42 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02206 4394ad1e91f2cc0ff91fd8a294743c10 315 Gene3D G3DSA:3.30.70.1560 130 220 2.1E-48 T 12-10-2018 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 Gene3D G3DSA:3.40.640.10 45 312 5.2E-139 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 Pfam PF00155 Aminotransferase class I and II 27 389 1.2E-64 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 Gene3D G3DSA:3.90.1150.10 11 389 5.2E-139 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 SUPERFAMILY SSF53383 1 392 2.78E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 2.7E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 2.7E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 2.7E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_B00279 9ebb6906e103781712dc7dd9fb61ea79 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 2.7E-28 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A00036 0a53bc244e6ea87b7d8a7b829a34aca2 172 PIRSF PIRSF016548 11 172 1.6E-66 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 vfu_A00036 0a53bc244e6ea87b7d8a7b829a34aca2 172 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 11 162 2.1E-55 T 12-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 vfu_A00036 0a53bc244e6ea87b7d8a7b829a34aca2 172 Gene3D G3DSA:1.20.120.1370 1 165 2.9E-55 T 12-10-2018 IPR038309 Rsd/AlgQ superfamily vfu_A00662 02b99dad37be683d0622361942803775 611 Pfam PF00884 Sulfatase 251 526 4.0E-37 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 vfu_A00662 02b99dad37be683d0622361942803775 611 PIRSF PIRSF004950 1 611 5.2E-215 T 12-10-2018 IPR012159 Inner membrane protein YejM vfu_A00662 02b99dad37be683d0622361942803775 611 Pfam PF11893 Domain of unknown function (DUF3413) 2 242 9.2E-69 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal vfu_A00662 02b99dad37be683d0622361942803775 611 SUPERFAMILY SSF53649 248 585 9.95E-64 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A00662 02b99dad37be683d0622361942803775 611 Gene3D G3DSA:3.40.720.10 243 562 2.7E-59 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 Gene3D G3DSA:1.10.10.10 5 90 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 Gene3D G3DSA:3.40.190.10 169 258 1.5E-9 T 12-10-2018 vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 SUPERFAMILY SSF46785 6 86 5.94E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 SUPERFAMILY SSF53850 122 291 2.17E-19 T 12-10-2018 vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 Gene3D G3DSA:3.40.190.10 138 168 1.5E-9 T 12-10-2018 vfu_B00230 5009b3fd34250fba21c5b46dd7666110 295 Pfam PF03466 LysR substrate binding domain 123 290 8.5E-16 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 SMART SM01004 8 326 3.3E-199 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 Gene3D G3DSA:3.20.20.70 7 327 1.6E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 Pfam PF00490 Delta-aminolevulinic acid dehydratase 11 325 5.6E-133 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 SUPERFAMILY SSF51569 9 327 3.37E-130 T 12-10-2018 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 3.8E-54 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 3.8E-54 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 3.8E-54 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 3.8E-54 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 3.8E-54 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 3.8E-54 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_B00633 57a19f62bc341c57965d224d1b1ac03d 328 PIRSF PIRSF001415 1 328 7.3E-136 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A01259 df7aa377d3c047eb3ffb9596233b6852 325 SMART SM00260 177 311 2.3E-4 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01259 df7aa377d3c047eb3ffb9596233b6852 325 Pfam PF01584 CheW-like domain 181 313 2.5E-13 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01259 df7aa377d3c047eb3ffb9596233b6852 325 PIRSF PIRSF020479 1 325 1.6E-122 T 12-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like vfu_A01259 df7aa377d3c047eb3ffb9596233b6852 325 SUPERFAMILY SSF50341 177 313 2.75E-14 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 Pfam PF01202 Shikimate kinase 13 169 9.7E-58 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.587 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 Gene3D G3DSA:3.40.50.300 1 172 7.3E-57 T 12-10-2018 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 SUPERFAMILY SSF52540 4 169 2.13E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 12-10-2018 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 12-10-2018 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 12-10-2018 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 12-10-2018 vfu_A00634 e8e07b3cd8a61f185db0cce5a378578e 172 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 12-10-2018 vfu_B01229 0f1ce154661416c0279c3f6013a80b85 850 SUPERFAMILY SSF51126 26 356 1.26E-59 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor vfu_B01229 0f1ce154661416c0279c3f6013a80b85 850 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 588 830 3.5E-13 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain vfu_B01229 0f1ce154661416c0279c3f6013a80b85 850 Pfam PF01095 Pectinesterase 27 266 3.8E-39 T 12-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 vfu_B01229 0f1ce154661416c0279c3f6013a80b85 850 SUPERFAMILY SSF52266 583 841 1.43E-40 T 12-10-2018 vfu_B01229 0f1ce154661416c0279c3f6013a80b85 850 Gene3D G3DSA:3.40.50.1110 583 849 1.0E-49 T 12-10-2018 IPR036514 SGNH hydrolase superfamily vfu_B01229 0f1ce154661416c0279c3f6013a80b85 850 Gene3D G3DSA:2.160.20.10 24 361 3.3E-124 T 12-10-2018 IPR012334 Pectin lyase fold vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 Gene3D G3DSA:4.10.430.10 92 135 2.4E-23 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 Pfam PF00816 H-NS histone family 33 128 2.6E-18 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 PIRSF PIRSF002096 1 135 1.9E-50 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 SUPERFAMILY SSF81273 93 135 4.71E-12 T 12-10-2018 vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 SMART SM00528 88 135 1.5E-22 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 SUPERFAMILY SSF81273 2 58 3.34E-16 T 12-10-2018 vfu_A00779 d6d253c5bd9db89f50fb10f83285831f 135 Gene3D G3DSA:1.10.287.1050 1 83 1.0E-26 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 4.8E-45 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 10 492 1.6E-90 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 PIRSF PIRSF006615 1 494 2.3E-194 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 SUPERFAMILY SSF55486 1 493 1.59E-117 T 12-10-2018 vfu_A01959 e87df4cbb33b29b72b2e285adb5b10dc 494 Gene3D G3DSA:1.10.1370.30 1 494 5.0E-194 T 12-10-2018 vfu_A01696 0fa620480a1227d362ed63da3c7360b2 294 SUPERFAMILY SSF46689 10 81 6.09E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01696 0fa620480a1227d362ed63da3c7360b2 294 SUPERFAMILY SSF53697 108 264 5.34E-14 T 12-10-2018 vfu_A01696 0fa620480a1227d362ed63da3c7360b2 294 Gene3D G3DSA:1.10.10.10 7 81 6.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01696 0fa620480a1227d362ed63da3c7360b2 294 Gene3D G3DSA:3.40.50.10490 108 285 8.7E-19 T 12-10-2018 vfu_A01696 0fa620480a1227d362ed63da3c7360b2 294 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 79 1.1E-11 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Gene3D G3DSA:3.40.50.300 215 434 8.2E-53 T 12-10-2018 vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 SMART SM00487 25 223 5.5E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Gene3D G3DSA:3.30.70.330 480 549 1.4E-10 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Pfam PF03880 DbpA RNA binding domain 479 546 9.4E-17 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 SMART SM00490 259 340 2.2E-34 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 551 42.023 T 12-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 SUPERFAMILY SSF52540 74 361 5.88E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Pfam PF00270 DEAD/DEAH box helicase 30 196 1.7E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_B00040 6de2c79c189d80cd102ac765f048c344 632 Gene3D G3DSA:3.40.50.300 1 211 3.8E-73 T 12-10-2018 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 SUPERFAMILY SSF160544 249 352 1.44E-33 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 350 2.9E-109 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 7 29 6.4E-31 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 6.4E-31 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 6.4E-31 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 6.4E-31 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 6.4E-31 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 344 5.1E-112 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A02272 08b49657c192254eda6ae589f4d6fd8f 372 Gene3D G3DSA:3.40.1690.10 215 356 3.6E-50 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.578 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Gene3D G3DSA:3.40.640.10 69 317 5.0E-177 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Gene3D G3DSA:3.90.1150.10 7 420 5.0E-177 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 Pfam PF00202 Aminotransferase class-III 33 395 4.7E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 4.0E-193 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 vfu_A00920 2cdd6b5d7a86ef0470db9e3058d78fc0 430 SUPERFAMILY SSF53383 1 423 2.53E-134 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SMART SM00387 444 588 3.7E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SUPERFAMILY SSF55874 403 586 7.47E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SUPERFAMILY SSF50341 587 719 1.22E-29 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Gene3D G3DSA:2.40.50.180 611 674 5.1E-36 T 12-10-2018 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Gene3D G3DSA:3.30.565.10 400 587 5.0E-60 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Gene3D G3DSA:2.30.30.40 588 715 5.1E-36 T 12-10-2018 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Gene3D G3DSA:1.10.287.560 337 399 7.0E-17 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SUPERFAMILY SSF47226 4 128 3.93E-30 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SMART SM00073 5 102 8.2E-24 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Gene3D G3DSA:1.20.120.160 1 144 5.0E-37 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SMART SM01231 336 399 6.2E-19 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SMART SM00260 580 719 8.2E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 338 399 1.3E-15 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Pfam PF01627 Hpt domain 7 101 3.4E-18 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 SUPERFAMILY SSF47384 338 400 4.32E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 447 587 4.7E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 503 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 566 1.1E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00983 10a43694ec5f9a1a1a5d48c008819f29 736 Pfam PF01584 CheW-like domain 595 720 3.2E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A00725 9e95f5b9ef5b7d0b6ff48d60d334607b 238 SUPERFAMILY SSF52540 1 235 2.27E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00725 9e95f5b9ef5b7d0b6ff48d60d334607b 238 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00725 9e95f5b9ef5b7d0b6ff48d60d334607b 238 Gene3D G3DSA:3.40.50.300 1 232 1.4E-59 T 12-10-2018 vfu_A00725 9e95f5b9ef5b7d0b6ff48d60d334607b 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 215 8.7E-103 T 12-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 vfu_A00725 9e95f5b9ef5b7d0b6ff48d60d334607b 238 Pfam PF00005 ABC transporter 19 161 3.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00725 9e95f5b9ef5b7d0b6ff48d60d334607b 238 SMART SM00382 24 214 2.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 Pfam PF13091 PLD-like domain 34 146 1.9E-7 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 Pfam PF13091 PLD-like domain 251 402 2.8E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 Gene3D G3DSA:3.30.870.10 18 225 4.3E-166 T 12-10-2018 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 SUPERFAMILY SSF56024 5 187 5.02E-28 T 12-10-2018 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 SUPERFAMILY SSF56024 245 408 1.83E-24 T 12-10-2018 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 SMART SM00155 126 152 0.0015 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 SMART SM00155 347 374 9.5E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 PIRSF PIRSF000850 1 446 1.2E-225 T 12-10-2018 vfu_A00050 095050dc0a2918c697b2a6c1694496ab 446 Gene3D G3DSA:3.30.870.10 12 442 4.3E-166 T 12-10-2018 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 Pfam PF02163 Peptidase family M50 3 432 3.0E-86 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 SMART SM00228 204 273 1.3E-4 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 SMART SM00228 107 178 0.12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 444 2.7E-133 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 SUPERFAMILY SSF50156 83 178 9.46E-12 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 Pfam PF13180 PDZ domain 220 280 7.8E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 Gene3D G3DSA:2.30.42.10 218 305 6.8E-18 T 12-10-2018 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 Gene3D G3DSA:2.30.42.10 118 213 2.9E-30 T 12-10-2018 vfu_A01076 bd1fd4b3994282bbcf2b464d55b600fd 444 SUPERFAMILY SSF50156 189 283 1.06E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_B00625 7a75b64a6da55c74917e8a75508e6064 327 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 309 2.7E-50 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 vfu_B00625 7a75b64a6da55c74917e8a75508e6064 327 Gene3D G3DSA:3.40.190.10 21 322 4.6E-137 T 12-10-2018 vfu_B00625 7a75b64a6da55c74917e8a75508e6064 327 SUPERFAMILY SSF53850 20 322 1.74E-89 T 12-10-2018 vfu_B00625 7a75b64a6da55c74917e8a75508e6064 327 Gene3D G3DSA:3.40.190.100 109 250 4.6E-137 T 12-10-2018 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 Gene3D G3DSA:3.40.50.1970 1 171 8.2E-68 T 12-10-2018 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 SUPERFAMILY SSF56796 4 355 1.96E-119 T 12-10-2018 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 74.116 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 Gene3D G3DSA:1.20.1090.10 172 361 3.1E-72 T 12-10-2018 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 6.1E-123 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 PIRSF PIRSF001455 7 358 8.5E-110 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 vfu_A00635 b4c82a90589b7af865dddba69fefddd4 361 Pfam PF01761 3-dehydroquinate synthase 67 324 1.3E-113 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 3.4E-27 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 1.8E-32 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 Gene3D G3DSA:1.20.81.30 59 175 7.2E-30 T 12-10-2018 vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 Gene3D G3DSA:1.20.81.30 260 371 6.6E-27 T 12-10-2018 vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 5.0E-20 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 5.0E-20 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 5.0E-20 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00870 6503ad9c0a19ed796f7efb33a0fa6c45 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 5.0E-20 T 12-10-2018 IPR003004 GspF/PilC family vfu_B00758 9e615e20372768a099f225d6bcdf45ff 92 Gene3D G3DSA:3.10.50.40 2 92 2.5E-33 T 12-10-2018 vfu_B00758 9e615e20372768a099f225d6bcdf45ff 92 Pfam PF13616 PPIC-type PPIASE domain 14 89 3.9E-23 T 12-10-2018 vfu_B00758 9e615e20372768a099f225d6bcdf45ff 92 SUPERFAMILY SSF54534 7 90 2.03E-25 T 12-10-2018 vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 SUPERFAMILY SSF50331 237 360 5.1E-19 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 Gene3D G3DSA:2.40.50.100 267 358 4.6E-14 T 12-10-2018 vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 Gene3D G3DSA:2.40.50.140 284 345 4.6E-14 T 12-10-2018 vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 Pfam PF00005 ABC transporter 19 161 6.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 Gene3D G3DSA:3.40.50.300 1 238 1.2E-74 T 12-10-2018 vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 SUPERFAMILY SSF52540 4 241 1.05E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00536 ae027b61c32d13d80dde0913db6d5336 360 SMART SM00382 28 210 6.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01573 7da3134f86bacc8ae5faa00bdc08cc71 287 Gene3D G3DSA:3.30.2010.10 68 161 8.7E-38 T 12-10-2018 vfu_A01573 7da3134f86bacc8ae5faa00bdc08cc71 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.246 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 vfu_A01573 7da3134f86bacc8ae5faa00bdc08cc71 287 Pfam PF01435 Peptidase family M48 79 286 4.4E-40 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 vfu_B00912 ed19218af3458719e79d72e9baf49467 232 SUPERFAMILY SSF52821 131 232 1.7E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00912 ed19218af3458719e79d72e9baf49467 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 1.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00912 ed19218af3458719e79d72e9baf49467 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00912 ed19218af3458719e79d72e9baf49467 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 1.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00912 ed19218af3458719e79d72e9baf49467 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 1.7E-12 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00912 ed19218af3458719e79d72e9baf49467 232 SMART SM00418 35 113 2.3E-23 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B00912 ed19218af3458719e79d72e9baf49467 232 Gene3D G3DSA:1.10.10.10 21 119 1.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00912 ed19218af3458719e79d72e9baf49467 232 SUPERFAMILY SSF46785 31 174 3.45E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00912 ed19218af3458719e79d72e9baf49467 232 SMART SM00450 132 229 1.4E-14 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00912 ed19218af3458719e79d72e9baf49467 232 Pfam PF00581 Rhodanese-like domain 133 225 7.6E-15 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00912 ed19218af3458719e79d72e9baf49467 232 Gene3D G3DSA:3.40.250.10 120 231 3.3E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00912 ed19218af3458719e79d72e9baf49467 232 Pfam PF01022 Bacterial regulatory protein, arsR family 43 87 6.3E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A03138 e0a1182ca740228ef609977aa94124dd 70 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 4 65 3.7E-16 T 12-10-2018 IPR014318 Phage shock protein, PspG vfu_A03138 e0a1182ca740228ef609977aa94124dd 70 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 2 65 4.2E-23 T 12-10-2018 IPR014318 Phage shock protein, PspG vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 39 267 1.3E-44 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 PIRSF PIRSF015626 16 278 6.1E-65 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 Gene3D G3DSA:3.40.140.10 138 281 4.3E-38 T 12-10-2018 vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 Gene3D G3DSA:3.10.20.10 43 129 3.4E-9 T 12-10-2018 vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 SUPERFAMILY SSF53927 30 274 1.74E-65 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 18 279 27.146 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_B00478 1d4f4a16a938b487fc4cf39baed33ad6 286 Pfam PF02634 FdhD/NarQ family 42 273 8.0E-63 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A02822 66c4dcf8bd3fb1b25f3ef407ef4c302e 253 Gene3D G3DSA:2.40.230.20 5 253 1.6E-80 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 vfu_A02822 66c4dcf8bd3fb1b25f3ef407ef4c302e 253 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 35 59 1.9E-5 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 vfu_A02822 66c4dcf8bd3fb1b25f3ef407ef4c302e 253 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 93 113 1.9E-5 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 vfu_A02822 66c4dcf8bd3fb1b25f3ef407ef4c302e 253 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 229 252 1.9E-5 T 12-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 vfu_A02822 66c4dcf8bd3fb1b25f3ef407ef4c302e 253 SUPERFAMILY SSF111364 12 253 1.83E-79 T 12-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 vfu_A02822 66c4dcf8bd3fb1b25f3ef407ef4c302e 253 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 12 253 5.1E-98 T 12-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 vfu_B00533 5d17d84322a8bd0f1d6c8075f244ca06 330 Gene3D G3DSA:2.115.10.20 1 328 2.8E-128 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_B00533 5d17d84322a8bd0f1d6c8075f244ca06 330 SUPERFAMILY SSF75005 25 320 2.67E-85 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_B00533 5d17d84322a8bd0f1d6c8075f244ca06 330 PIRSF PIRSF016202 11 328 5.6E-103 T 12-10-2018 IPR007184 Mannoside phosphorylase vfu_B00533 5d17d84322a8bd0f1d6c8075f244ca06 330 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 10 322 3.4E-82 T 12-10-2018 IPR007184 Mannoside phosphorylase vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 SUPERFAMILY SSF54909 80 167 7.33E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 65 1.2E-18 T 12-10-2018 vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 Pfam PF01037 Lrp/AsnC ligand binding domain 85 158 1.8E-20 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 SMART SM00344 19 128 5.8E-46 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 ProSitePatterns PS00519 AsnC-type HTH domain signature. 37 63 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 Gene3D G3DSA:3.30.70.920 71 164 1.1E-23 T 12-10-2018 vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 Gene3D G3DSA:1.10.10.10 9 70 2.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 35 2.4E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 46 65 2.4E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 46 2.4E-17 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00503 c30beb6e3bccf4a3078fb5682cc66e2d 169 SUPERFAMILY SSF46785 18 78 2.31E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 4 42 1.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 Pfam PF16925 Bacterial transcriptional repressor C-terminal 68 170 2.1E-7 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 Gene3D G3DSA:1.10.10.60 1 48 3.8E-14 T 12-10-2018 vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 ProSitePatterns PS01081 TetR-type HTH domain signature. 8 39 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 SUPERFAMILY SSF48498 62 174 2.46E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 SUPERFAMILY SSF46689 3 62 8.72E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01097 9ab62638b7c363d142ab6e24863063c3 177 Gene3D G3DSA:1.10.357.10 49 177 3.3E-17 T 12-10-2018 vfu_A01496 fcc713373ed316d6f86680b879ad816d 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 433 2.0E-64 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_A01496 fcc713373ed316d6f86680b879ad816d 524 PIRSF PIRSF002741 21 523 6.9E-69 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 vfu_A01496 fcc713373ed316d6f86680b879ad816d 524 SUPERFAMILY SSF53850 23 517 1.14E-97 T 12-10-2018 vfu_A01496 fcc713373ed316d6f86680b879ad816d 524 Gene3D G3DSA:3.40.190.10 53 505 2.9E-96 T 12-10-2018 vfu_A01496 fcc713373ed316d6f86680b879ad816d 524 Gene3D G3DSA:3.10.105.10 254 494 2.9E-96 T 12-10-2018 vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 6.4E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 SUPERFAMILY SSF53383 125 482 2.17E-61 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 Gene3D G3DSA:1.10.10.10 5 86 1.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 Gene3D G3DSA:3.40.640.10 115 475 1.4E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.0E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.0E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 Pfam PF00155 Aminotransferase class I and II 141 475 1.6E-8 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 SUPERFAMILY SSF46785 8 82 6.47E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01046 0267bdb3cde569194f7d0035c729d92b 594 SMART SM00345 20 79 3.1E-4 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00490 43416d21b27616b688c5f43610b1ba53 100 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 7 94 1.1E-24 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 vfu_B00490 43416d21b27616b688c5f43610b1ba53 100 Gene3D G3DSA:3.30.310.50 2 97 1.8E-21 T 12-10-2018 vfu_B00490 43416d21b27616b688c5f43610b1ba53 100 PIRSF PIRSF028291 1 98 7.5E-35 T 12-10-2018 IPR014543 Uncharacterised conserved protein UCP028291 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.74 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 5.3E-124 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:3.30.300.20 278 344 2.9E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF54814 279 342 3.84E-15 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF69705 1 126 2.09E-40 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF47794 429 492 1.88E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:1.10.150.20 431 490 1.0E-24 T 12-10-2018 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:3.30.300.20 199 277 3.2E-29 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:2.40.50.140 135 198 1.8E-17 T 12-10-2018 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SMART SM00316 133 198 3.9E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF47794 349 414 2.67E-16 T 12-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.8E-21 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 2.1E-18 T 12-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:3.30.1480.10 1 129 3.0E-44 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF50249 132 199 1.63E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Pfam PF08529 NusA N-terminal domain 4 123 1.1E-35 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Gene3D G3DSA:1.10.150.20 352 421 2.8E-29 T 12-10-2018 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 SUPERFAMILY SSF54814 201 278 4.19E-28 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Pfam PF13184 NusA-like KH domain 230 297 7.3E-27 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 vfu_A00939 2cfcf6438cab8caff306ad3fa31f51ff 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.8E-8 T 12-10-2018 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 Gene3D G3DSA:3.40.50.1820 1 272 1.6E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00412 Epoxide hydrolase signature 104 117 1.3E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00412 Epoxide hydrolase signature 244 266 1.3E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.3E-7 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 9.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 9.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 9.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 9.3E-7 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 SUPERFAMILY SSF53474 1 269 2.34E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02994 a049251cb8691bbf9a4af43cc1ea14df 272 Pfam PF00561 alpha/beta hydrolase fold 23 255 2.3E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01879 2d85572ea377011ab432bdf09d6a8131 153 Pfam PF11749 Protein of unknown function (DUF3305) 57 143 5.1E-19 T 12-10-2018 IPR021736 Protein of unknown function DUF3305 vfu_A02621 96c7912856eaa5366dc52a4639977eb2 117 SMART SM00938 7 105 1.1E-5 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A02621 96c7912856eaa5366dc52a4639977eb2 117 SUPERFAMILY SSF54913 1 103 1.81E-21 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta vfu_A02621 96c7912856eaa5366dc52a4639977eb2 117 Gene3D G3DSA:3.30.70.120 2 104 2.7E-13 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal vfu_A01770 92258f94d8dfe77ef7239d02c747b606 519 SMART SM00283 253 514 6.4E-49 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01770 92258f94d8dfe77ef7239d02c747b606 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 306 479 1.3E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01770 92258f94d8dfe77ef7239d02c747b606 519 Gene3D G3DSA:1.10.287.950 185 516 3.8E-64 T 12-10-2018 vfu_A01770 92258f94d8dfe77ef7239d02c747b606 519 SUPERFAMILY SSF58104 206 515 7.46E-62 T 12-10-2018 vfu_A01770 92258f94d8dfe77ef7239d02c747b606 519 SMART SM00304 185 238 6.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01770 92258f94d8dfe77ef7239d02c747b606 519 Pfam PF00672 HAMP domain 185 234 1.9E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 361 406 1.5E-15 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 Gene3D G3DSA:3.40.50.620 8 230 2.8E-69 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 304 23.531 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 SUPERFAMILY SSF82829 232 315 2.22E-25 T 12-10-2018 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 Pfam PF01171 PP-loop family 19 196 2.5E-59 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 SUPERFAMILY SSF52402 15 229 7.06E-59 T 12-10-2018 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 Gene3D G3DSA:1.20.59.20 231 315 1.8E-27 T 12-10-2018 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 SMART SM00977 361 430 4.6E-22 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 Pfam PF11734 TilS substrate C-terminal domain 363 430 1.1E-20 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 SUPERFAMILY SSF56037 320 430 3.92E-25 T 12-10-2018 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 Pfam PF09179 TilS substrate binding domain 245 312 6.7E-21 T 12-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 vfu_A01086 ebe1a0ddcdf36718042eae50e7afd242 432 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 200 4.5E-53 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 Gene3D G3DSA:3.30.450.20 9 128 4.3E-15 T 12-10-2018 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 SUPERFAMILY SSF46894 149 216 2.38E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 SUPERFAMILY SSF55785 22 123 6.63E-12 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 Pfam PF08448 PAS fold 13 124 1.9E-23 T 12-10-2018 IPR013656 PAS fold-4 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 6.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 6.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 6.4E-6 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 Gene3D G3DSA:1.10.10.10 143 214 5.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00971 feba0025e5e58c1e860d619e2e54fc74 239 SMART SM00421 154 211 1.6E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 Gene3D G3DSA:1.10.260.40 1 59 4.3E-21 T 12-10-2018 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.4E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.4E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 SMART SM00354 1 71 5.3E-32 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 SUPERFAMILY SSF47413 1 60 2.73E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 Gene3D G3DSA:3.40.50.2300 160 289 6.8E-71 T 12-10-2018 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 SUPERFAMILY SSF53822 61 331 4.93E-79 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 Pfam PF13377 Periplasmic binding protein-like domain 168 330 4.9E-34 T 12-10-2018 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.2E-18 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01171 26e872e81eba3c8b68466c9120fdbf83 335 Gene3D G3DSA:3.40.50.2300 63 306 6.8E-71 T 12-10-2018 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 SUPERFAMILY SSF47323 88 346 5.05E-69 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 SUPERFAMILY SSF52374 1 94 6.68E-13 T 12-10-2018 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 Pfam PF08264 Anticodon-binding domain of tRNA 121 273 7.4E-41 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 SUPERFAMILY SSF46589 332 396 2.72E-18 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 Gene3D G3DSA:1.10.287.380 325 397 3.8E-20 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 332 392 1.2E-18 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 1 77 1.0E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00757 86eead28f49c59c5759b3406bd4f331c 399 Gene3D G3DSA:1.10.730.10 22 265 1.4E-69 T 12-10-2018 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Gene3D G3DSA:2.40.50.640 83 157 1.2E-30 T 12-10-2018 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SUPERFAMILY SSF50249 83 173 6.0E-27 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SUPERFAMILY SSF50249 8 80 4.29E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SMART SM00955 193 522 1.6E-119 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SUPERFAMILY SSF50249 567 648 1.62E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Pfam PF00773 RNB domain 193 520 1.1E-86 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 649 42.289 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Gene3D G3DSA:2.40.50.140 1 82 1.0E-27 T 12-10-2018 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 648 0.0 T 12-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Pfam PF00575 S1 RNA binding domain 563 645 1.4E-11 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 ProSitePatterns PS01175 Ribonuclease II family signature. 489 513 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Pfam PF08206 Ribonuclease B OB domain 24 80 1.3E-16 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 Gene3D G3DSA:2.40.50.140 564 650 2.3E-35 T 12-10-2018 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 647 1.4E-190 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SMART SM00316 565 649 5.4E-5 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SMART SM00357 23 79 2.6E-7 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_B00039 a70f2632237ed58ffd3c75b91521067d 668 SUPERFAMILY SSF50249 192 561 4.11E-111 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B00474 40fbafbc0524532171a321308d713cab 774 Pfam PF01568 Molydopterin dinucleotide binding domain 649 736 1.8E-6 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_B00474 40fbafbc0524532171a321308d713cab 774 Pfam PF00384 Molybdopterin oxidoreductase 110 492 6.7E-21 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00474 40fbafbc0524532171a321308d713cab 774 SUPERFAMILY SSF53706 48 631 1.57E-142 T 12-10-2018 vfu_B00474 40fbafbc0524532171a321308d713cab 774 Gene3D G3DSA:3.40.228.10 182 404 1.8E-64 T 12-10-2018 vfu_B00474 40fbafbc0524532171a321308d713cab 774 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 14 762 2.6E-283 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 vfu_B00474 40fbafbc0524532171a321308d713cab 774 PIRSF PIRSF000144 1 767 0.0 T 12-10-2018 vfu_B00474 40fbafbc0524532171a321308d713cab 774 SUPERFAMILY SSF50692 645 764 1.04E-14 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_B00474 40fbafbc0524532171a321308d713cab 774 Gene3D G3DSA:3.40.50.740 122 496 1.8E-64 T 12-10-2018 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 Gene3D G3DSA:2.40.110.10 213 336 6.8E-100 T 12-10-2018 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 Pfam PF09317 Domain of unknown function (DUF1974) 491 772 3.8E-114 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 Gene3D G3DSA:1.20.140.10 337 484 6.8E-100 T 12-10-2018 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 116 210 2.4E-15 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 337 484 2.2E-15 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 Gene3D G3DSA:1.10.540.10 99 212 6.8E-100 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 SUPERFAMILY SSF47203 337 484 7.89E-25 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 vfu_A01096 de835d0ae743cca800ecd369c1775075 790 SUPERFAMILY SSF56645 96 332 1.23E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 Gene3D G3DSA:1.10.287.470 52 111 7.6E-74 T 12-10-2018 vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 Gene3D G3DSA:2.40.30.170 7 231 7.6E-74 T 12-10-2018 vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 SUPERFAMILY SSF111369 7 226 4.32E-31 T 12-10-2018 vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 4 301 6.1E-86 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 20 213 2.6E-10 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 Gene3D G3DSA:2.40.50.100 18 150 7.6E-74 T 12-10-2018 vfu_A01664 745d1543c3c1ae8a5f875a2214ac4017 307 Gene3D G3DSA:2.40.420.20 232 298 7.6E-74 T 12-10-2018 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 290 4.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 306 4.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 Pfam PF12833 Helix-turn-helix domain 229 306 4.0E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 SUPERFAMILY SSF46689 259 308 1.12E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 Gene3D G3DSA:1.10.10.60 207 311 2.7E-31 T 12-10-2018 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 SMART SM00342 223 306 4.1E-32 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00492 adaa6f462c4c1fb8b9204c3cd7fdc261 315 SUPERFAMILY SSF46689 208 258 1.25E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 SUPERFAMILY SSF52540 3 301 1.81E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:3.10.20.30 48 362 7.0E-150 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 6.6E-22 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.153 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 SUPERFAMILY SSF81271 279 360 6.54E-37 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 3.3E-168 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:3.40.50.300 4 278 7.0E-150 T 12-10-2018 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 Gene3D G3DSA:1.10.150.300 120 200 7.0E-150 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 vfu_A01135 d091d2b2020cb705661fb601cfaca49b 363 PIRSF PIRSF006641 1 363 5.4E-157 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 vfu_A01654 9cdfccfbe6b6f00b9685b46fb2940b2d 255 Pfam PF11150 Protein of unknown function (DUF2927) 26 226 1.8E-65 T 12-10-2018 IPR021323 Protein of unknown function DUF2927 vfu_A01008 bdc2222a103a347494463c0f9af71f7c 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 241 3.6E-61 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase vfu_A01008 bdc2222a103a347494463c0f9af71f7c 244 Gene3D G3DSA:3.60.140.10 1 241 3.1E-88 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily vfu_A01008 bdc2222a103a347494463c0f9af71f7c 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 240 3.6E-75 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase vfu_A01008 bdc2222a103a347494463c0f9af71f7c 244 SUPERFAMILY SSF64438 2 242 1.47E-83 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:1.10.287.470 104 174 6.2E-5 T 12-10-2018 vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 146 282 2.1E-16 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:1.10.287.470 73 101 3.4E-12 T 12-10-2018 vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 SUPERFAMILY SSF111369 40 119 2.35E-11 T 12-10-2018 vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:2.40.50.100 41 72 3.4E-12 T 12-10-2018 vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:2.40.30.170 232 334 1.3E-29 T 12-10-2018 vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 SUPERFAMILY SSF111369 178 250 2.75E-8 T 12-10-2018 vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Pfam PF13533 Biotin-lipoyl like 39 86 1.1E-14 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_A02178 d5e83fec08f2a7226917756a60e298ac 335 Gene3D G3DSA:2.40.50.100 176 231 6.6E-7 T 12-10-2018 vfu_A01382 5057e802cbdb929116c3134b7dde6a92 176 Pfam PF04170 NlpE N-terminal domain 79 166 1.2E-30 T 12-10-2018 IPR007298 Copper resistance lipoprotein NlpE vfu_A01382 5057e802cbdb929116c3134b7dde6a92 176 Gene3D G3DSA:2.40.128.640 66 176 4.9E-40 T 12-10-2018 vfu_A01811 f5f9fa94499213061c72ecd70438a597 199 Pfam PF01810 LysE type translocator 14 191 1.8E-18 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A02768 636f1a63f75330fc1a606470fb6aa978 423 Pfam PF13742 OB-fold nucleic acid binding domain 3 83 1.2E-25 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 vfu_A02768 636f1a63f75330fc1a606470fb6aa978 423 Pfam PF02601 Exonuclease VII, large subunit 106 420 6.6E-104 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 vfu_A02768 636f1a63f75330fc1a606470fb6aa978 423 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 3 340 7.2E-134 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 vfu_A02768 636f1a63f75330fc1a606470fb6aa978 423 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 423 29.057 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 vfu_A00155 8c445bd9207e1c56cfe05e9cfcbeb710 78 SUPERFAMILY SSF143800 2 76 5.49E-30 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00155 8c445bd9207e1c56cfe05e9cfcbeb710 78 Gene3D G3DSA:2.30.170.40 2 78 1.1E-32 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00155 8c445bd9207e1c56cfe05e9cfcbeb710 78 Pfam PF00830 Ribosomal L28 family 3 62 5.0E-26 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00155 8c445bd9207e1c56cfe05e9cfcbeb710 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00155 8c445bd9207e1c56cfe05e9cfcbeb710 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.292 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SMART SM00091 80 146 2.0E-4 T 12-10-2018 IPR000014 PAS domain vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 8.7E-28 T 12-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF55021 1 68 8.14E-7 T 12-10-2018 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:1.10.10.60 457 513 3.9E-25 T 12-10-2018 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Pfam PF00158 Sigma-54 interaction domain 206 370 5.5E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:3.30.450.20 82 186 2.2E-20 T 12-10-2018 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Pfam PF13188 PAS domain 84 132 6.4E-4 T 12-10-2018 IPR000014 PAS domain vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF52540 205 444 1.13E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SMART SM00382 225 368 3.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:1.10.8.60 376 452 2.9E-16 T 12-10-2018 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:3.40.50.300 196 375 9.5E-58 T 12-10-2018 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 Gene3D G3DSA:3.30.70.260 1 80 7.1E-26 T 12-10-2018 vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF55785 83 168 8.03E-10 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A01787 4bed1a4ff6aff01a0b31dc6d04fe6c61 514 SUPERFAMILY SSF46689 458 512 1.79E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 Pfam PF00182 Chitinase class I 82 305 2.3E-31 T 12-10-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 Gene3D G3DSA:2.10.10.20 412 453 9.9E-14 T 12-10-2018 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 SMART SM00495 486 531 0.0081 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 SMART SM00495 412 454 1.2E-8 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 SUPERFAMILY SSF53955 65 328 7.03E-54 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 SUPERFAMILY SSF51055 413 453 2.22E-12 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 Gene3D G3DSA:3.30.20.10 156 226 7.2E-77 T 12-10-2018 vfu_A02755 55af82be3b64b2e46c0fcf0d6bbd9229 534 Gene3D G3DSA:1.10.530.10 83 324 7.2E-77 T 12-10-2018 vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 Gene3D G3DSA:3.20.20.450 415 668 1.3E-96 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 Pfam PF00563 EAL domain 420 655 1.9E-73 T 12-10-2018 IPR001633 EAL domain vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 SMART SM00267 231 402 6.8E-63 T 12-10-2018 IPR000160 GGDEF domain vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 Gene3D G3DSA:3.30.70.270 236 414 1.6E-59 T 12-10-2018 vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 SMART SM00052 412 660 1.8E-103 T 12-10-2018 IPR001633 EAL domain vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 401 1.2E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 7.1E-46 T 12-10-2018 IPR000160 GGDEF domain vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 SUPERFAMILY SSF55073 247 404 1.33E-48 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00955 23784760d7e6dfa003afb84b16f461f1 685 SUPERFAMILY SSF141868 418 672 5.1E-88 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01258 f481d9b43d8619208a7fdb434a225311 258 Pfam PF13614 AAA domain 4 181 3.8E-51 T 12-10-2018 IPR025669 AAA domain vfu_A01258 f481d9b43d8619208a7fdb434a225311 258 SUPERFAMILY SSF52540 1 252 3.97E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01258 f481d9b43d8619208a7fdb434a225311 258 PIRSF PIRSF009320 102 240 8.4E-8 T 12-10-2018 vfu_A01258 f481d9b43d8619208a7fdb434a225311 258 PIRSF PIRSF009320 1 88 1.1E-13 T 12-10-2018 vfu_A01258 f481d9b43d8619208a7fdb434a225311 258 Gene3D G3DSA:3.40.50.300 1 253 7.6E-69 T 12-10-2018 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 7.5E-248 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SUPERFAMILY SSF52540 77 355 9.72E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Gene3D G3DSA:3.40.50.300 76 351 8.8E-112 T 12-10-2018 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 5.1E-61 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SUPERFAMILY SSF50615 1 75 1.96E-24 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Gene3D G3DSA:1.10.1140.10 352 467 4.3E-53 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 3.0E-21 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SUPERFAMILY SSF47917 352 466 5.76E-50 T 12-10-2018 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.948 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 Gene3D G3DSA:2.40.10.170 2 75 8.8E-29 T 12-10-2018 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A00350 55c7baf80b6886bb0ecbf1ca5a1d3b15 467 SMART SM00382 142 334 2.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01455 6af1e7f957634309468daa371f7fedfe 275 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 13 272 4.5E-75 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 vfu_B01455 6af1e7f957634309468daa371f7fedfe 275 Gene3D G3DSA:1.10.3720.10 57 271 5.4E-24 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01455 6af1e7f957634309468daa371f7fedfe 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 271 3.5E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01455 6af1e7f957634309468daa371f7fedfe 275 SUPERFAMILY SSF161098 30 264 1.2E-28 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02539 367b892dc21581179e4c79c4484c6fad 352 SUPERFAMILY SSF56349 65 332 1.38E-38 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A02539 367b892dc21581179e4c79c4484c6fad 352 Gene3D G3DSA:1.10.443.10 172 341 2.0E-36 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A02539 367b892dc21581179e4c79c4484c6fad 352 Pfam PF00589 Phage integrase family 177 324 4.3E-16 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Gene3D G3DSA:3.30.230.40 165 256 1.0E-36 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 3.4E-79 T 12-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 3.6E-28 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Gene3D G3DSA:3.40.50.1000 1 164 1.9E-46 T 12-10-2018 IPR023214 HAD superfamily vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Gene3D G3DSA:3.30.230.40 257 357 8.5E-37 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 SUPERFAMILY SSF56784 4 159 5.51E-40 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.341 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 SUPERFAMILY SSF54211 169 253 3.41E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.1E-48 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 5.1E-6 T 12-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.213 T 12-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 SUPERFAMILY SSF54211 254 344 1.39E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.8E-66 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 vfu_A01594 a964e934d0b7f219c29ca3f51fc3c67b 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 vfu_A02517 09d40aa314d73f24bc74280e103c8589 300 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 5 228 1.7E-49 T 12-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 vfu_A00800 d05b4a880badcccc10c4c97151e787c0 411 SUPERFAMILY SSF109604 158 323 6.28E-25 T 12-10-2018 vfu_A00800 d05b4a880badcccc10c4c97151e787c0 411 Gene3D G3DSA:1.10.3210.10 12 322 3.3E-54 T 12-10-2018 vfu_A00800 d05b4a880badcccc10c4c97151e787c0 411 TIGRFAM TIGR00277 HDIG: HDIG domain 160 253 1.3E-7 T 12-10-2018 IPR006675 HDIG domain vfu_A00800 d05b4a880badcccc10c4c97151e787c0 411 SMART SM00471 158 294 6.9E-7 T 12-10-2018 IPR003607 HD/PDEase domain vfu_A00800 d05b4a880badcccc10c4c97151e787c0 411 Pfam PF11871 Domain of unknown function (DUF3391) 1 131 2.4E-26 T 12-10-2018 IPR021812 Protein of unknown function DUF3391 vfu_A00800 d05b4a880badcccc10c4c97151e787c0 411 Pfam PF01966 HD domain 164 284 5.3E-15 T 12-10-2018 IPR006674 HD domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SMART SM00091 21 87 6.6E-4 T 12-10-2018 IPR000014 PAS domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SMART SM00086 93 133 3.6E-5 T 12-10-2018 IPR001610 PAC motif vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 Gene3D G3DSA:3.30.450.20 17 134 1.3E-18 T 12-10-2018 vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SUPERFAMILY SSF55785 26 135 2.62E-19 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 Pfam PF00563 EAL domain 320 553 1.0E-61 T 12-10-2018 IPR001633 EAL domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SUPERFAMILY SSF55073 150 303 9.42E-18 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 Gene3D G3DSA:3.30.70.270 142 315 9.4E-19 T 12-10-2018 vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SMART SM00052 312 558 1.8E-67 T 12-10-2018 IPR001633 EAL domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 Pfam PF08447 PAS fold 44 120 1.0E-11 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 297 1.3E-15 T 12-10-2018 IPR000160 GGDEF domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SMART SM00267 133 302 2.1E-11 T 12-10-2018 IPR000160 GGDEF domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 137 3.6E-13 T 12-10-2018 IPR000014 PAS domain vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 SUPERFAMILY SSF141868 318 563 5.89E-71 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01368 739cd33752f0799d26156f0b8381bc2e 571 Gene3D G3DSA:3.20.20.450 316 565 8.2E-75 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.064 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 SUPERFAMILY SSF56821 1 551 2.35E-191 T 12-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 Gene3D G3DSA:3.40.50.2030 383 551 5.4E-61 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 Gene3D G3DSA:3.40.50.2030 237 382 2.3E-61 T 12-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.0E-224 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 PIRSF PIRSF000076 1 553 2.0E-238 T 12-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 Gene3D G3DSA:1.20.1270.20 153 235 1.3E-27 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 Gene3D G3DSA:1.20.1270.20 1 142 1.9E-33 T 12-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 vfu_B01297 e3d047f671a808ddcedce7f2af68b4e4 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 547 1.2E-161 T 12-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 vfu_A02286 30ea246c1e119dd7028af4a32a14417e 307 SUPERFAMILY SSF46785 15 85 1.68E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02286 30ea246c1e119dd7028af4a32a14417e 307 Pfam PF03466 LysR substrate binding domain 93 297 3.2E-42 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02286 30ea246c1e119dd7028af4a32a14417e 307 SUPERFAMILY SSF53850 93 301 4.16E-45 T 12-10-2018 vfu_A02286 30ea246c1e119dd7028af4a32a14417e 307 Gene3D G3DSA:3.40.190.290 95 298 7.6E-64 T 12-10-2018 vfu_A02286 30ea246c1e119dd7028af4a32a14417e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 67 1.8E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02286 30ea246c1e119dd7028af4a32a14417e 307 Gene3D G3DSA:1.10.10.10 9 91 3.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 3.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 213 3.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 3.1E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 Pfam PF00672 HAMP domain 219 265 4.8E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 SUPERFAMILY SSF58104 237 546 7.06E-68 T 12-10-2018 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 SMART SM00304 217 269 2.2E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 354 510 2.1E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 SMART SM00283 284 545 1.5E-58 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01069 1780be5efb86f33d04fa0eda6495580b 546 Gene3D G3DSA:1.10.287.950 217 546 8.8E-69 T 12-10-2018 vfu_A01597 093569fb1d80d8b3f05be1a305f8f765 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.1E-77 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 vfu_A01597 093569fb1d80d8b3f05be1a305f8f765 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.277 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 vfu_A01597 093569fb1d80d8b3f05be1a305f8f765 257 Gene3D G3DSA:3.20.20.70 1 257 4.3E-94 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01597 093569fb1d80d8b3f05be1a305f8f765 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.1E-113 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 vfu_A01597 093569fb1d80d8b3f05be1a305f8f765 257 SUPERFAMILY SSF51366 1 256 1.1E-73 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_B01488 ce222b66764757bb7e8803ae5d5f265a 167 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 157 1.5E-22 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A01413 717dcf6c17a6e1b877262180fc565321 287 SUPERFAMILY SSF54637 6 114 2.11E-40 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A01413 717dcf6c17a6e1b877262180fc565321 287 Gene3D G3DSA:3.10.129.90 2 287 1.8E-108 T 12-10-2018 vfu_A01413 717dcf6c17a6e1b877262180fc565321 287 Pfam PF13622 Thioesterase-like superfamily 33 282 2.8E-62 T 12-10-2018 vfu_A01413 717dcf6c17a6e1b877262180fc565321 287 SUPERFAMILY SSF54637 116 283 9.34E-59 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A01413 717dcf6c17a6e1b877262180fc565321 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.1E-95 T 12-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 SUPERFAMILY SSF103190 153 211 1.69E-6 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 Gene3D G3DSA:1.10.287.950 344 675 4.4E-64 T 12-10-2018 vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 Pfam PF17201 Cache 3/Cache 2 fusion domain 44 320 8.4E-38 T 12-10-2018 IPR033462 Cache 3/Cache 2 fusion domain vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 Gene3D G3DSA:3.30.450.20 186 325 4.4E-6 T 12-10-2018 vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 SMART SM00283 414 675 5.2E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 SUPERFAMILY SSF58104 386 674 7.72E-60 T 12-10-2018 vfu_B01228 228850dd22f8911fa2cf54d2377f85e6 675 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 492 642 3.1E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.70.1320 135 330 2.5E-270 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 12-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 8.1E-241 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82714 185 269 1.96E-17 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.4E-32 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.70.1440 663 860 2.5E-270 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:1.20.1640.10 12 509 2.5E-270 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:1.20.1640.10 510 1030 2.5E-270 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.70.1430 42 810 2.5E-270 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82693 46 127 2.38E-19 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82693 137 328 2.62E-22 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.2090.10 714 802 2.5E-270 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.2090.10 181 272 2.5E-270 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82866 799 1037 1.31E-50 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82714 716 800 5.1E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 SUPERFAMILY SSF82866 294 498 5.75E-43 T 12-10-2018 vfu_A01433 aef873cb142ab947d9c614700d5f3218 1047 Gene3D G3DSA:3.30.70.1430 560 662 2.5E-270 T 12-10-2018 vfu_B00078 8f0f593a4bea28f1f232f94ea098915d 135 Pfam PF00293 NUDIX domain 10 94 3.7E-11 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_B00078 8f0f593a4bea28f1f232f94ea098915d 135 Gene3D G3DSA:3.90.79.10 1 131 8.2E-20 T 12-10-2018 vfu_B00078 8f0f593a4bea28f1f232f94ea098915d 135 SUPERFAMILY SSF55811 6 121 6.77E-23 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 6.4E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 SUPERFAMILY SSF88946 2 108 2.51E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 Gene3D G3DSA:1.10.10.10 122 190 2.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 SUPERFAMILY SSF88659 124 186 1.68E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 2.6E-102 T 12-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 Pfam PF08281 Sigma-70, region 4 130 181 3.5E-18 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 Gene3D G3DSA:1.10.1740.10 1 121 1.6E-46 T 12-10-2018 vfu_A00830 88a02e285e4e40da5e1c0c0e54220af3 190 Pfam PF04542 Sigma-70 region 2 25 92 9.1E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 SUPERFAMILY SSF46894 132 234 1.5E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 Gene3D G3DSA:1.10.10.10 130 239 3.2E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 SMART SM00862 156 232 1.0E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 SUPERFAMILY SSF52172 3 127 1.01E-41 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 Gene3D G3DSA:3.40.50.2300 1 125 9.7E-40 T 12-10-2018 vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 SMART SM00448 5 116 9.0E-44 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 Pfam PF00072 Response regulator receiver domain 7 117 3.5E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00538 11f9b8b49229a6fd7e7cd7c00637114d 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 8.0E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF100920 383 539 3.53E-60 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF53067 1 182 2.09E-66 T 12-10-2018 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 631 36.332 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF100934 534 607 9.42E-6 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 4.8E-288 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Pfam PF00012 Hsp70 protein 4 601 9.2E-265 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 53 61 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 197 207 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 364 384 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 387 406 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 137 157 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 333 349 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 PRINTS PR00301 70kDa heat shock protein signature 468 484 6.3E-80 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:1.20.1270.10 523 602 8.8E-27 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.420.40 179 365 8.1E-167 T 12-10-2018 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 SUPERFAMILY SSF53067 186 381 7.13E-66 T 12-10-2018 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.90.640.10 228 315 8.1E-167 T 12-10-2018 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:2.60.34.10 382 522 9.8E-66 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A02728 c1bb8b7752763ec41d3e1e3795ea5edd 636 Gene3D G3DSA:3.30.420.40 5 378 8.1E-167 T 12-10-2018 vfu_B01429 9a414f5a8caf3e9b87c308a53771c935 520 SUPERFAMILY SSF53720 20 507 8.51E-146 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B01429 9a414f5a8caf3e9b87c308a53771c935 520 Gene3D G3DSA:3.40.309.10 273 473 1.7E-140 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_B01429 9a414f5a8caf3e9b87c308a53771c935 520 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 29 504 6.8E-241 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 vfu_B01429 9a414f5a8caf3e9b87c308a53771c935 520 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 298 309 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_B01429 9a414f5a8caf3e9b87c308a53771c935 520 Gene3D G3DSA:3.40.605.10 47 481 1.7E-140 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B01429 9a414f5a8caf3e9b87c308a53771c935 520 Pfam PF00171 Aldehyde dehydrogenase family 38 500 1.6E-137 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A00941 3071900a380af42e9e5063392f562ac6 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.6E-30 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 vfu_A00941 3071900a380af42e9e5063392f562ac6 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 4.0E-46 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 vfu_A00941 3071900a380af42e9e5063392f562ac6 131 SUPERFAMILY SSF89919 2 105 3.53E-32 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily vfu_A00941 3071900a380af42e9e5063392f562ac6 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 vfu_A00941 3071900a380af42e9e5063392f562ac6 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 26.529 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 vfu_A00941 3071900a380af42e9e5063392f562ac6 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 116 2.9E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 vfu_A00941 3071900a380af42e9e5063392f562ac6 131 Gene3D G3DSA:3.30.300.20 1 106 1.6E-35 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 Pfam PF00701 Dihydrodipicolinate synthetase family 2 293 8.3E-38 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 SUPERFAMILY SSF51569 1 295 3.56E-66 T 12-10-2018 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 SMART SM01130 1 295 1.2E-66 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 PIRSF PIRSF001365 1 297 5.8E-58 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 Gene3D G3DSA:3.20.20.70 1 296 1.4E-81 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 4.7E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 4.7E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 101 117 4.7E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_A01674 ff60d2d8cd66c5ddb12a74e05602f93e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 4.7E-10 T 12-10-2018 IPR002220 DapA-like GO:0016829 vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 236 252 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 PIRSF PIRSF000412 5 435 7.6E-169 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 Gene3D G3DSA:3.90.1150.10 25 406 9.8E-185 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 21 435 52.976 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 Pfam PF00464 Serine hydroxymethyltransferase 23 399 2.1E-173 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 SUPERFAMILY SSF53383 13 434 1.73E-180 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01364 2a8c4c15aef0625385125ac6c755df4a 435 Gene3D G3DSA:3.40.640.10 51 302 9.8E-185 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01379 e4191ea0c965999ac2179343068df581 85 SUPERFAMILY SSF143120 1 75 4.45E-16 T 12-10-2018 IPR036165 YefM-like superfamily vfu_A01379 e4191ea0c965999ac2179343068df581 85 Gene3D G3DSA:3.40.1620.10 1 40 2.9E-6 T 12-10-2018 vfu_A01379 e4191ea0c965999ac2179343068df581 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 72 3.0E-14 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM vfu_A01379 e4191ea0c965999ac2179343068df581 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 53 8.2E-11 T 12-10-2018 vfu_A00214 f71ca32db850fd62da9869a8b0504ddf 261 SMART SM00382 26 215 3.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00214 f71ca32db850fd62da9869a8b0504ddf 261 Gene3D G3DSA:3.40.50.300 1 254 1.9E-61 T 12-10-2018 vfu_A00214 f71ca32db850fd62da9869a8b0504ddf 261 SUPERFAMILY SSF52540 6 231 9.84E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00214 f71ca32db850fd62da9869a8b0504ddf 261 Pfam PF00005 ABC transporter 22 166 3.6E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00214 f71ca32db850fd62da9869a8b0504ddf 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 Gene3D G3DSA:3.40.50.300 245 456 8.7E-66 T 12-10-2018 vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 Pfam PF13638 PIN domain 9 150 6.1E-35 T 12-10-2018 IPR002716 PIN domain vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 SMART SM00670 7 141 7.8E-8 T 12-10-2018 IPR002716 PIN domain vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 SUPERFAMILY SSF88723 7 155 4.51E-14 T 12-10-2018 IPR029060 PIN-like domain superfamily vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 SUPERFAMILY SSF52540 247 439 1.63E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 Gene3D G3DSA:3.40.50.1010 3 155 1.2E-27 T 12-10-2018 vfu_A00752 a92a28f96a5fed72bd9cb74814239120 458 Pfam PF02562 PhoH-like protein 248 452 1.6E-54 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.5E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 Pfam PF08362 YcdC-like protein, C-terminal region 71 210 7.4E-43 T 12-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 SUPERFAMILY SSF48498 88 210 4.05E-37 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 9.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 9.9E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 SUPERFAMILY SSF46689 15 87 1.1E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 Gene3D G3DSA:1.10.10.60 4 70 3.3E-18 T 12-10-2018 vfu_B00194 ac50b3dbce98e8befa02ee056a688453 213 Gene3D G3DSA:1.10.357.10 71 211 1.2E-46 T 12-10-2018 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 ProSitePatterns PS00012 Phosphopantetheine attachment site. 469 484 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Gene3D G3DSA:3.30.559.30 714 960 6.1E-76 T 12-10-2018 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF52777 534 710 7.41E-36 T 12-10-2018 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF47336 441 509 1.83E-12 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Gene3D G3DSA:3.30.559.10 533 906 6.1E-76 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 SMART SM00823 Phosphopantetheine attachment site 445 514 0.0054 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Pfam PF00550 Phosphopantetheine attachment site 442 509 1.5E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Gene3D G3DSA:1.10.1200.10 430 517 2.1E-16 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Gene3D G3DSA:3.30.559.10 13 202 1.0E-7 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF52777 22 170 8.78E-10 T 12-10-2018 vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Pfam PF00668 Condensation domain 27 177 1.4E-5 T 12-10-2018 IPR001242 Condensation domain vfu_A01482 e7f4ba3cead52e25949b245593923656 974 Pfam PF00668 Condensation domain 529 960 9.2E-56 T 12-10-2018 IPR001242 Condensation domain vfu_A01482 e7f4ba3cead52e25949b245593923656 974 SUPERFAMILY SSF52777 715 960 4.78E-35 T 12-10-2018 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 SUPERFAMILY SSF51412 1 477 1.44E-124 T 12-10-2018 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 PIRSF PIRSF000130 1 487 1.8E-200 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.8E-161 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 Gene3D G3DSA:3.20.20.70 1 486 3.4E-209 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 SMART SM00116 96 144 1.5E-12 T 12-10-2018 IPR000644 CBS domain vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 SMART SM00116 158 206 3.2E-5 T 12-10-2018 IPR000644 CBS domain vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 SUPERFAMILY SSF54631 94 203 3.92E-25 T 12-10-2018 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 Pfam PF00571 CBS domain 95 140 3.0E-10 T 12-10-2018 IPR000644 CBS domain vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 Pfam PF00571 CBS domain 152 201 0.0034 T 12-10-2018 IPR000644 CBS domain vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 3.2E-196 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.449 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 vfu_A02767 de44627b29bf910becdaa604b68e15f9 487 SMART SM01240 7 473 0.0 T 12-10-2018 vfu_A02148 f5684264225eb6cf3ccc2f282e778134 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 2.8E-44 T 12-10-2018 IPR007376 dsDNA mimic, putative vfu_A02148 f5684264225eb6cf3ccc2f282e778134 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.354 T 12-10-2018 IPR007376 dsDNA mimic, putative vfu_A02148 f5684264225eb6cf3ccc2f282e778134 106 Gene3D G3DSA:3.10.450.140 5 105 6.6E-41 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily vfu_A02148 f5684264225eb6cf3ccc2f282e778134 106 SUPERFAMILY SSF102816 3 105 2.09E-46 T 12-10-2018 IPR036763 Putative dsDNA mimic superfamily vfu_A02148 f5684264225eb6cf3ccc2f282e778134 106 PIRSF PIRSF004916 1 105 3.6E-51 T 12-10-2018 IPR007376 dsDNA mimic, putative vfu_A02148 f5684264225eb6cf3ccc2f282e778134 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 18 104 3.0E-41 T 12-10-2018 IPR007376 dsDNA mimic, putative vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 Gene3D G3DSA:3.40.50.2300 61 306 3.6E-80 T 12-10-2018 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 Gene3D G3DSA:1.10.260.40 1 59 2.1E-26 T 12-10-2018 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 SUPERFAMILY SSF47413 1 59 1.69E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 Gene3D G3DSA:3.40.50.2300 160 289 3.6E-80 T 12-10-2018 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 SUPERFAMILY SSF53822 60 332 9.11E-90 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.9E-41 T 12-10-2018 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 SMART SM00354 1 71 1.2E-33 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A00587 0ccb9e00e979f88daf1e5be13f09e0ba 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 10 465 4.8E-206 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 25 42 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 Pfam PF02378 Phosphotransferase system, EIIC 116 408 1.8E-31 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 Gene3D G3DSA:3.30.1360.60 3 82 2.2E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 SUPERFAMILY SSF55604 14 86 1.7E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 Pfam PF00367 phosphotransferase system, EIIB 15 47 7.9E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A02670 ddd20ce5c28bce2a085fe64e3965cea8 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 34 115 3.9E-14 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 Gene3D G3DSA:1.10.10.250 73 141 6.9E-26 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 Gene3D G3DSA:3.30.1550.10 2 72 3.2E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 71 6.0E-14 T 12-10-2018 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.6E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.715 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 SMART SM00649 9 141 9.5E-83 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 SUPERFAMILY SSF54747 3 73 1.44E-29 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.3E-23 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 3.2E-29 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal vfu_A00042 50d4cb682892baa540bf69afb63bee69 142 SUPERFAMILY SSF46906 68 141 2.88E-25 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 86 313 6.0E-37 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Gene3D G3DSA:1.10.10.10 163 237 3.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 SUPERFAMILY SSF88659 220 319 4.36E-24 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF00140 Sigma-70 factor, region 1.2 52 85 2.5E-13 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 283 309 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF04539 Sigma-70 region 3 170 243 5.3E-22 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF04542 Sigma-70 region 2 90 159 6.8E-20 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 324 39.705 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 SUPERFAMILY SSF88946 51 160 4.71E-46 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 45 324 6.5E-139 T 12-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Pfam PF04545 Sigma-70, region 4 258 311 1.3E-17 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Gene3D G3DSA:1.10.10.10 246 325 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 Gene3D G3DSA:1.10.601.10 1 159 1.5E-49 T 12-10-2018 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 SUPERFAMILY SSF88659 163 236 2.01E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 114 127 1.4E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 138 146 1.4E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 298 309 1.4E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 283 298 1.4E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 PRINTS PR00046 Major sigma-70 factor signature 262 274 1.4E-27 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A02982 9a5ff48dfcc65cd98ca69ac27d51be67 329 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 114 127 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 Gene3D G3DSA:1.10.10.10 8 77 1.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 Gene3D G3DSA:3.90.1150.10 118 447 1.7E-59 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 SMART SM00345 17 76 5.1E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 Pfam PF00155 Aminotransferase class I and II 124 445 7.1E-21 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 SUPERFAMILY SSF46785 10 86 1.42E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 SUPERFAMILY SSF53383 71 449 2.99E-66 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 Gene3D G3DSA:3.40.640.10 131 348 1.7E-59 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00929 6ddf98d2bcccf05a13b37ce75eaa6b29 454 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.2E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A01355 71346b0003fcb052b3605442ff4c7f83 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 97 232 1.4E-34 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal vfu_A01355 71346b0003fcb052b3605442ff4c7f83 233 SMART SM00858 109 170 1.6E-4 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_A01355 71346b0003fcb052b3605442ff4c7f83 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 23 229 8.4E-41 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal vfu_A01355 71346b0003fcb052b3605442ff4c7f83 233 Gene3D G3DSA:2.30.30.760 174 233 1.6E-8 T 12-10-2018 vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 Gene3D G3DSA:3.40.190.10 169 258 7.4E-9 T 12-10-2018 vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 Gene3D G3DSA:3.40.190.10 97 168 7.4E-9 T 12-10-2018 vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 SUPERFAMILY SSF53850 92 288 3.26E-23 T 12-10-2018 vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 SUPERFAMILY SSF46785 2 85 2.18E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 Gene3D G3DSA:1.10.10.10 3 94 1.6E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 7.0E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00975 9db43db4f00e1adc53e97f99dd27f8e2 296 Pfam PF03466 LysR substrate binding domain 95 288 5.3E-12 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 ProSitePatterns PS01155 Endonuclease III family signature. 107 136 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 197 213 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 SUPERFAMILY SSF48150 9 230 4.4E-73 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 Pfam PF14815 NUDIX domain 241 334 9.4E-20 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 Gene3D G3DSA:1.10.340.30 26 137 2.3E-84 T 12-10-2018 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 Gene3D G3DSA:1.10.1670.10 14 216 2.3E-84 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 SMART SM00478 44 195 2.9E-45 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 271 8.6E-104 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 Pfam PF00633 Helix-hairpin-helix motif 106 133 2.3E-7 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 SUPERFAMILY SSF55811 225 335 4.26E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 40 171 3.8E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 vfu_A03060 035c9bd4255d662236d48b9bbb5e0a24 341 Gene3D G3DSA:3.90.79.10 239 340 9.1E-11 T 12-10-2018 vfu_A02718 42374fa3e64eeaff26b63777d733cb79 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 7.3E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02718 42374fa3e64eeaff26b63777d733cb79 295 Gene3D G3DSA:3.40.190.290 92 288 6.2E-67 T 12-10-2018 vfu_A02718 42374fa3e64eeaff26b63777d733cb79 295 Gene3D G3DSA:1.10.10.10 3 91 3.9E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02718 42374fa3e64eeaff26b63777d733cb79 295 Pfam PF03466 LysR substrate binding domain 88 288 1.2E-45 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02718 42374fa3e64eeaff26b63777d733cb79 295 SUPERFAMILY SSF46785 5 88 4.21E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02718 42374fa3e64eeaff26b63777d733cb79 295 SUPERFAMILY SSF53850 89 290 2.71E-46 T 12-10-2018 vfu_B00782 adfc9f5188db078e5ea72b508bb44d23 429 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 1 428 1.6E-89 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 vfu_B00782 adfc9f5188db078e5ea72b508bb44d23 429 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 7 428 6.2E-108 T 12-10-2018 IPR010263 Type VI secretion protein, VC_A0114 vfu_A00338 eeb91bbb7a9906a3ee8c8bec76207236 144 Pfam PF00258 Flavodoxin 4 125 6.8E-19 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 vfu_A00338 eeb91bbb7a9906a3ee8c8bec76207236 144 Gene3D G3DSA:3.40.50.360 1 143 4.9E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A00338 eeb91bbb7a9906a3ee8c8bec76207236 144 SUPERFAMILY SSF52218 2 144 9.64E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01728 4a95112b68afdf9aa624bdc4c3e8d5d6 170 PIRSF PIRSF028103 1 170 1.1E-41 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 vfu_A01728 4a95112b68afdf9aa624bdc4c3e8d5d6 170 Pfam PF13740 ACT domain 4 60 2.4E-8 T 12-10-2018 vfu_A01728 4a95112b68afdf9aa624bdc4c3e8d5d6 170 SUPERFAMILY SSF55021 88 167 2.33E-11 T 12-10-2018 vfu_A01728 4a95112b68afdf9aa624bdc4c3e8d5d6 170 Gene3D G3DSA:3.30.70.260 83 170 3.5E-13 T 12-10-2018 vfu_B01056 e929f889ce509b777274fb89d939a66c 391 Gene3D G3DSA:1.20.1250.20 199 383 1.2E-14 T 12-10-2018 vfu_B01056 e929f889ce509b777274fb89d939a66c 391 Pfam PF07690 Major Facilitator Superfamily 14 343 1.1E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B01056 e929f889ce509b777274fb89d939a66c 391 Gene3D G3DSA:1.20.1250.20 2 198 1.1E-9 T 12-10-2018 vfu_B01056 e929f889ce509b777274fb89d939a66c 391 SUPERFAMILY SSF103473 4 379 1.01E-38 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B01472 38874a459eacedfd801e9652b798fabf 254 Pfam PF08666 SAF domain 11 82 4.5E-12 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_B01472 38874a459eacedfd801e9652b798fabf 254 Gene3D G3DSA:3.90.1210.30 4 85 2.7E-25 T 12-10-2018 vfu_B01472 38874a459eacedfd801e9652b798fabf 254 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 112 248 4.5E-43 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 vfu_B01472 38874a459eacedfd801e9652b798fabf 254 SMART SM00858 11 82 1.5E-11 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 Gene3D G3DSA:3.20.20.10 1 234 1.6E-87 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 Pfam PF01168 Alanine racemase, N-terminal domain 7 230 8.7E-32 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 SUPERFAMILY SSF51419 1 228 5.76E-83 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 34.712 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 1.4E-84 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 vfu_A03051 8728ce94c0e4f0a5b54a3a411dff9db4 235 PIRSF PIRSF004848 1 235 3.6E-77 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 vfu_A00623 e6b89468f034da0b903016652382047f 278 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 266 9.2E-114 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00623 e6b89468f034da0b903016652382047f 278 Gene3D G3DSA:1.10.275.10 1 107 4.6E-36 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 5.9E-45 T 12-10-2018 vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 5.9E-45 T 12-10-2018 vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 5.9E-45 T 12-10-2018 vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 5.9E-45 T 12-10-2018 vfu_A00623 e6b89468f034da0b903016652382047f 278 Gene3D G3DSA:1.20.200.10 108 277 6.2E-65 T 12-10-2018 vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 5.7E-20 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 5.7E-20 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00623 e6b89468f034da0b903016652382047f 278 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 5.7E-20 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A00623 e6b89468f034da0b903016652382047f 278 Pfam PF00206 Lyase 6 271 1.5E-71 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal vfu_A00623 e6b89468f034da0b903016652382047f 278 SUPERFAMILY SSF48557 3 268 2.2E-79 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 SUPERFAMILY SSF46689 214 265 2.06E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 Gene3D G3DSA:1.10.10.60 209 320 1.1E-36 T 12-10-2018 vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 Gene3D G3DSA:3.40.50.880 4 207 2.2E-20 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 SMART SM00342 231 314 1.1E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 SUPERFAMILY SSF52317 7 198 1.51E-15 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 310 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 SUPERFAMILY SSF46689 267 316 8.06E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00712 6ee20c58b3e60f44e1a24c695ce8bae0 321 Pfam PF12833 Helix-turn-helix domain 237 315 4.4E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A02345 7f50f13b51441f90eb262e94c8f3ceb1 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 1.2E-92 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 vfu_A02345 7f50f13b51441f90eb262e94c8f3ceb1 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.677 T 12-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 vfu_A02345 7f50f13b51441f90eb262e94c8f3ceb1 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 205 2.6E-42 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_A02407 849333ed149912978085778217fc944a 386 Gene3D G3DSA:3.40.1350.10 251 376 9.5E-78 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 vfu_A02407 849333ed149912978085778217fc944a 386 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 3.2E-166 T 12-10-2018 IPR015093 Protein of unknown function DUF1887 vfu_A02407 849333ed149912978085778217fc944a 386 Gene3D G3DSA:1.10.10.680 169 250 9.5E-78 T 12-10-2018 vfu_A02407 849333ed149912978085778217fc944a 386 Gene3D G3DSA:3.40.50.10770 1 140 3.9E-60 T 12-10-2018 vfu_A02407 849333ed149912978085778217fc944a 386 SUPERFAMILY SSF52980 1 382 1.97E-119 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 304 516 9.0E-25 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SMART SM00062 54 276 1.1E-15 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SMART SM00062 300 518 9.3E-9 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 878 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 897 915 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 921 934 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 PRINTS PR00344 Bacterial sensor protein C-terminal signature 882 892 2.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF53850 55 273 1.33E-29 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.40.190.10 385 477 2.3E-55 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF55874 755 934 1.44E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.40.190.10 140 235 1.3E-55 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SMART SM00448 961 1078 4.1E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF01627 Hpt domain 1110 1181 4.9E-5 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF53850 303 517 2.04E-33 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 813 935 9.1E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF47226 1061 1175 2.36E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.40.190.10 44 272 1.3E-55 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF47384 687 766 5.89E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF08448 PAS fold 580 687 5.8E-9 T 12-10-2018 IPR013656 PAS fold-4 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF00512 His Kinase A (phospho-acceptor) domain 699 765 9.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SMART SM00387 812 937 1.0E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.30.565.10 767 939 1.3E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SMART SM00388 699 765 6.7E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 58 272 8.8E-22 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.40.50.2300 950 1087 2.3E-34 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF55785 557 684 1.54E-14 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:1.10.287.130 686 766 9.7E-18 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 SUPERFAMILY SSF52172 961 1082 3.56E-33 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Pfam PF00072 Response regulator receiver domain 963 1078 1.6E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.40.190.10 291 514 2.3E-55 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:3.30.450.20 551 685 5.7E-14 T 12-10-2018 vfu_B00670 041dd834fb49d5c2b24d8dec7be208cf 1190 Gene3D G3DSA:1.20.120.160 1091 1190 2.1E-9 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Gene3D G3DSA:2.40.30.20 1 93 1.4E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Gene3D G3DSA:3.40.50.300 94 382 1.4E-128 T 12-10-2018 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.4E-44 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 508 3.2E-249 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 SUPERFAMILY SSF50615 10 94 1.75E-24 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Gene3D G3DSA:1.20.150.20 383 511 9.2E-46 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 511 48.802 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 6.8E-12 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 4.9E-72 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 SUPERFAMILY SSF47917 383 509 6.02E-45 T 12-10-2018 vfu_B01328 fd9c478ac9bfd28fe63ea96c8cfcbdd5 511 SUPERFAMILY SSF52540 96 381 1.94E-93 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00585 caa02cf3d3dd2016a75db8532499302e 443 PIRSF PIRSF006060 1 432 7.0E-48 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B00585 caa02cf3d3dd2016a75db8532499302e 443 Pfam PF13520 Amino acid permease 7 416 4.6E-69 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B00585 caa02cf3d3dd2016a75db8532499302e 443 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 438 2.1E-148 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 vfu_B00585 caa02cf3d3dd2016a75db8532499302e 443 Gene3D G3DSA:1.20.1740.10 2 442 2.5E-54 T 12-10-2018 vfu_A03122 a2e0e16fd4d9e44427f64a029115d691 289 Gene3D G3DSA:3.90.550.10 1 277 2.1E-81 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A03122 a2e0e16fd4d9e44427f64a029115d691 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 8.0E-125 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 vfu_A03122 a2e0e16fd4d9e44427f64a029115d691 289 SUPERFAMILY SSF53448 2 269 8.14E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A03122 a2e0e16fd4d9e44427f64a029115d691 289 Pfam PF00483 Nucleotidyl transferase 9 265 2.4E-32 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 1.2E-51 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 SUPERFAMILY SSF55545 126 257 3.74E-27 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 SUPERFAMILY SSF51445 258 618 1.15E-128 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 Gene3D G3DSA:3.20.20.80 257 634 8.6E-138 T 12-10-2018 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 Gene3D G3DSA:3.30.379.10 131 256 6.2E-22 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 2.8E-120 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A00908 15aaa178efccc82547921b7b86b0315d 638 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 138 255 3.3E-18 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal vfu_A01513 c34c11ba694c74667839389972866ef6 241 SUPERFAMILY SSF51735 3 240 1.47E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.1E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01513 c34c11ba694c74667839389972866ef6 241 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 241 4.4E-127 T 12-10-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01513 c34c11ba694c74667839389972866ef6 241 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 194 0.008 T 12-10-2018 vfu_A01513 c34c11ba694c74667839389972866ef6 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 1.0E-56 T 12-10-2018 vfu_A01513 c34c11ba694c74667839389972866ef6 241 Gene3D G3DSA:3.40.50.720 1 241 1.0E-71 T 12-10-2018 vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 Gene3D G3DSA:1.10.443.10 114 296 1.6E-73 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 SUPERFAMILY SSF56349 11 293 2.5E-56 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 302 56.482 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.465 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 Gene3D G3DSA:1.10.150.130 8 102 5.3E-23 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 4.2E-116 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 4.9E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 vfu_A00876 5c6a756541b02b7425abe8e25b66a543 302 Pfam PF00589 Phage integrase family 117 288 7.3E-54 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 Gene3D G3DSA:3.40.190.10 27 308 6.3E-110 T 12-10-2018 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 SUPERFAMILY SSF53850 24 341 1.13E-88 T 12-10-2018 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 Gene3D G3DSA:3.40.190.10 130 338 6.3E-110 T 12-10-2018 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 45 66 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 4.7E-61 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 PIRSF PIRSF019574 1 344 5.1E-111 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00987 5a09dc8dd43e24fb6fb539da6303f71f 344 Pfam PF13416 Bacterial extracellular solute-binding protein 40 297 4.4E-39 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A00629 90baf7d7887158d85f55d3722979459b 334 Gene3D G3DSA:3.30.420.40 2 115 1.2E-10 T 12-10-2018 vfu_A00629 90baf7d7887158d85f55d3722979459b 334 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 221 1.5E-71 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM vfu_A00629 90baf7d7887158d85f55d3722979459b 334 Pfam PF11104 Type IV pilus assembly protein PilM; 239 324 5.1E-10 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM vfu_A00629 90baf7d7887158d85f55d3722979459b 334 Pfam PF11104 Type IV pilus assembly protein PilM; 8 218 1.5E-33 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM vfu_A00629 90baf7d7887158d85f55d3722979459b 334 SUPERFAMILY SSF53067 5 161 2.1E-5 T 12-10-2018 vfu_A00629 90baf7d7887158d85f55d3722979459b 334 PIRSF PIRSF019169 230 326 1.6E-17 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM vfu_A00629 90baf7d7887158d85f55d3722979459b 334 PIRSF PIRSF019169 1 226 3.9E-57 T 12-10-2018 IPR005883 Type IV pilus assembly protein PilM vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:3.40.50.150 228 425 2.4E-70 T 12-10-2018 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:1.10.287.730 143 169 2.6E-12 T 12-10-2018 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 SUPERFAMILY SSF53335 139 424 3.04E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 6.3E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 6.3E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 6.3E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 6.3E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 6.3E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 8.7E-69 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 Pfam PF01029 NusB family 1 123 2.0E-25 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 SUPERFAMILY SSF48013 1 146 4.84E-37 T 12-10-2018 IPR035926 NusB-like superfamily vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 1.8E-149 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:3.30.70.1170 170 227 2.4E-25 T 12-10-2018 vfu_A00274 b7cc4da3d8e853676c334cd179cbc147 426 Gene3D G3DSA:1.10.940.10 1 142 1.9E-44 T 12-10-2018 IPR035926 NusB-like superfamily vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 236 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 6.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 6.3E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 Gene3D G3DSA:2.60.120.10 2 83 9.2E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 Pfam PF12833 Helix-turn-helix domain 164 241 1.1E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 SUPERFAMILY SSF46689 195 243 1.61E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 Gene3D G3DSA:1.10.10.60 140 244 1.7E-23 T 12-10-2018 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 SMART SM00342 158 240 2.1E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 SUPERFAMILY SSF51182 13 191 1.36E-13 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01451 b39ac57471b4825a59b0ae1166e9005a 245 Pfam PF07883 Cupin domain 12 75 9.4E-7 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 SUPERFAMILY SSF55874 5 215 1.72E-65 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF00204 DNA gyrase B 218 384 2.5E-42 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF01751 Toprim domain 413 521 6.8E-12 T 12-10-2018 IPR006171 TOPRIM domain vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 SUPERFAMILY SSF54211 217 382 1.23E-46 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 SUPERFAMILY SSF56719 388 619 5.23E-80 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.5E-58 T 12-10-2018 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 SMART SM00433 34 622 5.5E-213 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 2.7E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Gene3D G3DSA:3.30.230.10 216 389 5.2E-58 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 SMART SM00387 27 173 2.2E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 1.3E-27 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.978 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Gene3D G3DSA:3.40.50.670 390 621 2.9E-94 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.9E-127 T 12-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 vfu_A00864 db62bf503a75f95707b5a9a7f51e6ec8 626 Gene3D G3DSA:3.30.565.10 2 215 9.0E-74 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 SMART SM00342 181 263 7.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 Pfam PF12833 Helix-turn-helix domain 187 264 3.0E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 Gene3D G3DSA:2.60.120.10 14 114 3.7E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 Gene3D G3DSA:1.10.10.60 165 266 6.7E-25 T 12-10-2018 vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 SUPERFAMILY SSF46689 218 265 9.86E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 247 3.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 263 3.2E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00261 bd9e65aea4226776aad288921a0d55e2 266 SUPERFAMILY SSF51182 31 189 1.16E-10 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A00525 bcbc3226b04770e0b32397392c80fa1a 233 Pfam PF00156 Phosphoribosyl transferase domain 190 230 5.8E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_A00525 bcbc3226b04770e0b32397392c80fa1a 233 SUPERFAMILY SSF53271 54 230 4.54E-38 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A00525 bcbc3226b04770e0b32397392c80fa1a 233 Gene3D G3DSA:3.40.50.2020 86 233 2.6E-13 T 12-10-2018 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 SUPERFAMILY SSF63380 277 380 2.81E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00406 Cytochrome B5 reductase signature 389 408 1.1E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00406 Cytochrome B5 reductase signature 328 335 1.1E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00406 Cytochrome B5 reductase signature 479 487 1.1E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00406 Cytochrome B5 reductase signature 426 437 1.1E-6 T 12-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 SUPERFAMILY SSF141673 6 133 5.36E-30 T 12-10-2018 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Gene3D G3DSA:2.40.30.10 279 378 1.4E-24 T 12-10-2018 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 556 564 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 SUPERFAMILY SSF54292 502 605 1.31E-25 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Pfam PF03473 MOSC domain 139 262 2.0E-29 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 SUPERFAMILY SSF50800 4 264 1.26E-15 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Gene3D G3DSA:3.40.50.80 384 508 3.6E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Gene3D G3DSA:3.10.20.30 509 606 8.9E-22 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 426 437 2.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 309 319 2.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 328 335 2.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 389 408 2.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 479 487 2.0E-8 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 SUPERFAMILY SSF52343 385 513 1.44E-33 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Pfam PF00175 Oxidoreductase NAD-binding domain 390 493 2.0E-15 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Pfam PF00970 Oxidoreductase FAD-binding domain 284 378 2.1E-15 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Pfam PF03476 MOSC N-terminal beta barrel domain 4 118 5.6E-31 T 12-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 vfu_B01276 932994b5071542a8ef807239c546f0c3 606 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 533 599 1.4E-12 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_A01131 541006cd38338937bad8851ec23d82ce 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 319 397 1.2E-5 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01131 541006cd38338937bad8851ec23d82ce 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 5.8E-102 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 vfu_A01131 541006cd38338937bad8851ec23d82ce 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.1E-12 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01131 541006cd38338937bad8851ec23d82ce 397 SUPERFAMILY SSF64518 1 397 3.27E-67 T 12-10-2018 vfu_A01131 541006cd38338937bad8851ec23d82ce 397 Gene3D G3DSA:1.20.1330.10 42 211 1.9E-36 T 12-10-2018 vfu_A01131 541006cd38338937bad8851ec23d82ce 397 Gene3D G3DSA:1.20.1330.10 262 373 4.5E-11 T 12-10-2018 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 3 160 1.5E-61 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 SUPERFAMILY SSF55021 3 77 3.15E-22 T 12-10-2018 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 Pfam PF13710 ACT domain 12 74 3.0E-18 T 12-10-2018 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 Gene3D G3DSA:3.30.70.1150 81 158 1.1E-27 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 76 2.0E-33 T 12-10-2018 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 SUPERFAMILY SSF55021 80 163 7.48E-26 T 12-10-2018 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 Gene3D G3DSA:3.30.70.260 1 79 4.1E-33 T 12-10-2018 vfu_A00815 e98cd6a87f4f2826692c25280fc875c7 165 Pfam PF10369 Small subunit of acetolactate synthase 85 159 1.1E-24 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 vfu_A00937 e09c34c1167ed106fac59291018a9dd7 112 Pfam PF03840 Preprotein translocase SecG subunit 4 72 2.1E-22 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 vfu_A00937 e09c34c1167ed106fac59291018a9dd7 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 2.3E-26 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 vfu_A00937 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-45 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 vfu_A00937 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 1.2E-45 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 vfu_A00937 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.2E-45 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 vfu_A00937 e09c34c1167ed106fac59291018a9dd7 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 1.2E-45 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 vfu_A03125 3bf3a2b220f6c977f78e4bcfe9711580 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site vfu_A03125 3bf3a2b220f6c977f78e4bcfe9711580 373 SUPERFAMILY SSF53383 9 371 1.17E-102 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A03125 3bf3a2b220f6c977f78e4bcfe9711580 373 Gene3D G3DSA:3.40.640.10 22 269 1.2E-143 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A03125 3bf3a2b220f6c977f78e4bcfe9711580 373 Gene3D G3DSA:3.90.1150.10 9 371 1.2E-143 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A03125 3bf3a2b220f6c977f78e4bcfe9711580 373 PIRSF PIRSF000524 5 373 3.3E-110 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 vfu_A03125 3bf3a2b220f6c977f78e4bcfe9711580 373 Pfam PF00266 Aminotransferase class-V 13 339 1.3E-38 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 SMART SM00448 2 112 7.4E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 SUPERFAMILY SSF52172 1 125 1.22E-28 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.3E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 SMART SM00421 140 197 1.2E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 Gene3D G3DSA:3.40.50.12740 2 200 2.5E-55 T 12-10-2018 vfu_A02666 b553fc8fc0b62504b6a5ca708e72fa51 202 SUPERFAMILY SSF46894 124 196 1.16E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00001 0261ee57344c3c5c09eb21bb2006f83d 107 Pfam PF13643 Domain of unknown function (DUF4145) 1 64 7.2E-13 T 12-10-2018 IPR025285 Domain of unknown function DUF4145 vfu_B01540 0261ee57344c3c5c09eb21bb2006f83d 107 Pfam PF13643 Domain of unknown function (DUF4145) 1 64 7.2E-13 T 12-10-2018 IPR025285 Domain of unknown function DUF4145 vfu_A01897 40ed4ccc4568a2e60c233fcc688a55dc 220 Pfam PF11205 Protein of unknown function (DUF2987) 23 166 6.7E-55 T 12-10-2018 IPR021370 Protein of unknown function DUF2987 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 SUPERFAMILY SSF46894 810 873 6.46E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 832 848 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 848 860 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 818 832 1.3E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 SUPERFAMILY SSF48452 422 784 1.84E-157 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 Pfam PF00196 Bacterial regulatory proteins, luxR family 817 872 8.5E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 Gene3D G3DSA:1.10.10.10 816 877 4.2E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 Gene3D G3DSA:3.40.50.300 1 144 2.8E-7 T 12-10-2018 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 ProSitePatterns PS00622 LuxR-type HTH domain signature. 832 859 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 Gene3D G3DSA:1.25.40.10 421 790 7.8E-83 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 SMART SM00421 815 872 2.5E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01006 51a047a6e8f674eeec72d4f349887663 881 SUPERFAMILY SSF52540 11 205 1.07E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 191 263 2.5E-13 T 12-10-2018 vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 Gene3D G3DSA:3.40.30.130 1 169 3.4E-65 T 12-10-2018 vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 SUPERFAMILY SSF52833 31 149 2.39E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 5.8E-22 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 PIRSF PIRSF015753 4 312 5.9E-137 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 SUPERFAMILY SSF47616 162 312 1.1E-39 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_A01539 a113a67b38ec5a3114c8403141af4bda 314 Gene3D G3DSA:1.20.1050.10 170 314 4.1E-73 T 12-10-2018 vfu_B00815 1bc42442f50f65cfe0c5444d58271ef5 378 Gene3D G3DSA:3.20.20.70 2 378 2.2E-128 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00815 1bc42442f50f65cfe0c5444d58271ef5 378 Pfam PF01070 FMN-dependent dehydrogenase 13 375 1.2E-128 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 vfu_B00815 1bc42442f50f65cfe0c5444d58271ef5 378 SUPERFAMILY SSF51395 7 374 5.92E-101 T 12-10-2018 vfu_B00815 1bc42442f50f65cfe0c5444d58271ef5 378 PIRSF PIRSF000138 2 378 6.0E-124 T 12-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 vfu_B00815 1bc42442f50f65cfe0c5444d58271ef5 378 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 378 73.207 T 12-10-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 vfu_B00815 1bc42442f50f65cfe0c5444d58271ef5 378 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 12-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 vfu_A02951 4475bffd9c49e2f4810a49ae57e03338 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.694 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid vfu_A02951 4475bffd9c49e2f4810a49ae57e03338 130 Gene3D G3DSA:3.30.230.10 1 130 7.3E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A02951 4475bffd9c49e2f4810a49ae57e03338 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.5E-46 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 vfu_A02951 4475bffd9c49e2f4810a49ae57e03338 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 vfu_A02951 4475bffd9c49e2f4810a49ae57e03338 130 SUPERFAMILY SSF54211 5 130 1.9E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Gene3D G3DSA:2.40.50.140 51 114 1.4E-28 T 12-10-2018 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Pfam PF01132 Elongation factor P (EF-P) OB domain 56 108 2.5E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Gene3D G3DSA:2.30.30.30 1 43 6.8E-21 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 1 47 6.2E-19 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 SUPERFAMILY SSF50249 55 113 2.91E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 SUPERFAMILY SSF50249 115 172 1.63E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Hamap MF_00141 Elongation factor P [efp]. 1 172 46.479 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 SMART SM01185 54 108 1.9E-24 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 TIGRFAM TIGR00038 efp: translation elongation factor P 2 172 4.8E-73 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 ProSitePatterns PS01275 Elongation factor P signature. 137 156 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 PIRSF PIRSF005901 1 173 1.5E-61 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 SMART SM00841 116 171 5.0E-32 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 SUPERFAMILY SSF50104 1 49 7.82E-15 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Pfam PF09285 Elongation factor P, C-terminal 116 171 9.8E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 vfu_A00607 2d33417080cd3da59a714c4f39b46767 173 Gene3D G3DSA:2.40.50.140 115 173 6.4E-28 T 12-10-2018 vfu_B00054 8a8011d32276ceea9f4e9ba9df7c417a 137 SUPERFAMILY SSF51316 2 136 1.67E-34 T 12-10-2018 IPR011057 Mss4-like superfamily vfu_B00054 8a8011d32276ceea9f4e9ba9df7c417a 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 118 8.3E-17 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 vfu_B00054 8a8011d32276ceea9f4e9ba9df7c417a 137 Gene3D G3DSA:3.90.1590.10 3 120 6.5E-14 T 12-10-2018 vfu_A02731 48f225591ee6aa8d4590ba17a5f44d7c 294 SUPERFAMILY SSF111331 8 290 8.63E-93 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily vfu_A02731 48f225591ee6aa8d4590ba17a5f44d7c 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.509 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 vfu_A02731 48f225591ee6aa8d4590ba17a5f44d7c 294 Pfam PF01513 ATP-NAD kinase 8 273 5.8E-69 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 vfu_A02731 48f225591ee6aa8d4590ba17a5f44d7c 294 Gene3D G3DSA:3.40.50.10330 23 289 2.3E-91 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 vfu_A02731 48f225591ee6aa8d4590ba17a5f44d7c 294 Gene3D G3DSA:2.60.200.30 129 266 2.3E-91 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 346 1.3E-73 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 Gene3D G3DSA:1.10.287.470 96 155 1.0E-73 T 12-10-2018 vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 SUPERFAMILY SSF111369 52 266 4.18E-40 T 12-10-2018 vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 Gene3D G3DSA:2.40.50.100 61 189 1.0E-73 T 12-10-2018 vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 262 3.6E-28 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 Gene3D G3DSA:2.40.30.170 52 272 1.0E-73 T 12-10-2018 vfu_A00252 269d0a89c5aaa2301db3042c16792bc6 361 Gene3D G3DSA:2.40.420.20 273 344 1.0E-73 T 12-10-2018 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 16.957 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 TIGRFAM TIGR00077 lspA: signal peptidase II 8 165 7.9E-47 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 Pfam PF01252 Signal peptidase (SPase) II 19 161 3.0E-37 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 5.8E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 5.8E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A00982 feded08594d1ca1b8bbbcd8212d5542c 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 5.8E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 7.3E-37 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.8E-46 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 6.3E-36 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 SUPERFAMILY SSF69055 302 398 3.27E-28 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 8.1E-159 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 Gene3D G3DSA:1.10.1740.10 312 401 1.0E-26 T 12-10-2018 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 45.258 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 SUPERFAMILY SSF51735 2 150 8.77E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01075 b6d56e7729d906c5be80976247243f27 402 Gene3D G3DSA:3.40.50.720 1 150 5.6E-52 T 12-10-2018 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 PIRSF PIRSF006205 1 401 1.6E-148 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 vfu_A01075 b6d56e7729d906c5be80976247243f27 402 SUPERFAMILY SSF55347 126 272 1.47E-61 T 12-10-2018 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 PIRSF PIRSF004654 1 295 1.2E-87 T 12-10-2018 IPR023605 Lipoprotein NlpI vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 Gene3D G3DSA:1.25.40.10 28 296 9.6E-84 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 Pfam PF13181 Tetratricopeptide repeat 103 134 0.21 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 101 134 5.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 135 168 330.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 67 100 0.6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 SMART SM00028 238 271 11.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A00945 aab5293485b3bfa7a659d7097395de89 305 SUPERFAMILY SSF48452 35 287 5.82E-67 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02340 32aae49920c37030a88fe403bba04347 260 SUPERFAMILY SSF48452 145 256 1.71E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02340 32aae49920c37030a88fe403bba04347 260 Pfam PF13432 Tetratricopeptide repeat 154 207 1.9E-7 T 12-10-2018 vfu_A02340 32aae49920c37030a88fe403bba04347 260 Gene3D G3DSA:1.25.40.10 142 260 4.3E-23 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02340 32aae49920c37030a88fe403bba04347 260 SMART SM00028 180 213 25.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02340 32aae49920c37030a88fe403bba04347 260 SMART SM00028 216 249 4.8 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02340 32aae49920c37030a88fe403bba04347 260 Gene3D G3DSA:1.20.5.110 43 123 7.6E-25 T 12-10-2018 vfu_A02340 32aae49920c37030a88fe403bba04347 260 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 143 259 3.5E-36 T 12-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal vfu_A02340 32aae49920c37030a88fe403bba04347 260 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 260 17.104 T 12-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 vfu_A02340 32aae49920c37030a88fe403bba04347 260 Pfam PF13174 Tetratricopeptide repeat 217 249 2.6E-7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02340 32aae49920c37030a88fe403bba04347 260 Pfam PF16331 TolA binding protein trimerisation 47 119 3.9E-25 T 12-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 vfu_B01508 87e05d575d4a5ece91c881919f1a6b6a 389 Pfam PF00155 Aminotransferase class I and II 62 376 2.8E-35 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B01508 87e05d575d4a5ece91c881919f1a6b6a 389 Gene3D G3DSA:3.90.1150.10 14 381 1.1E-149 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01508 87e05d575d4a5ece91c881919f1a6b6a 389 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 385 8.1E-139 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 vfu_B01508 87e05d575d4a5ece91c881919f1a6b6a 389 SUPERFAMILY SSF53383 4 386 3.9E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01508 87e05d575d4a5ece91c881919f1a6b6a 389 Gene3D G3DSA:3.40.640.10 65 289 1.1E-149 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Gene3D G3DSA:1.10.150.570 569 622 4.6E-22 T 12-10-2018 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Gene3D G3DSA:3.50.50.60 296 458 1.2E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Gene3D G3DSA:3.50.50.60 1 232 4.6E-91 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Pfam PF13932 GidA associated domain 403 616 4.1E-75 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.481 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 SMART SM01228 546 617 9.8E-42 T 12-10-2018 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Gene3D G3DSA:1.10.10.1800 459 550 5.9E-30 T 12-10-2018 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 Pfam PF01134 Glucose inhibited division protein A 8 398 7.6E-171 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 SUPERFAMILY SSF51905 6 261 9.06E-51 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00339 1f270f80f629b709f6cde340f1ee5a08 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 3.4E-293 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 247 40.036 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 37 247 2.4E-87 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 52 223 8.1E-52 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 PIRSF PIRSF000857 6 252 3.1E-59 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 25 246 1.6E-91 T 12-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 Gene3D G3DSA:3.40.50.620 8 220 6.2E-65 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A03133 5d7634a153dbcde3425a2d53f1fa10f9 257 SUPERFAMILY SSF52402 25 212 1.26E-55 T 12-10-2018 vfu_A02294 685d785754998e9400a95231d89963dc 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 6.4E-11 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A02294 685d785754998e9400a95231d89963dc 186 SUPERFAMILY SSF51161 1 177 4.44E-54 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A02294 685d785754998e9400a95231d89963dc 186 Pfam PF12464 Maltose acetyltransferase 1 51 9.8E-11 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_A02294 685d785754998e9400a95231d89963dc 186 Gene3D G3DSA:2.160.10.10 1 185 2.5E-66 T 12-10-2018 vfu_A02294 685d785754998e9400a95231d89963dc 186 SMART SM01266 1 52 1.4E-9 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_A02294 685d785754998e9400a95231d89963dc 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 87 100 0.12 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 Pfam PF00037 4Fe-4S binding domain 112 134 1.8E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 118 129 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 2 139 23.419 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 Gene3D G3DSA:3.30.70.20 9 61 1.0E-9 T 12-10-2018 vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 2 133 1.2E-38 T 12-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 SUPERFAMILY SSF54862 11 138 7.01E-19 T 12-10-2018 vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 Gene3D G3DSA:3.30.70.20 73 137 4.1E-10 T 12-10-2018 vfu_B00310 c33470e1bf028cacfb99746a8ec804ab 139 Pfam PF13187 4Fe-4S dicluster domain 13 58 6.2E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82866 809 1035 3.27E-43 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:1.20.1640.10 513 1027 0.0 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82714 184 273 2.62E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82693 39 132 9.07E-27 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82714 725 809 7.32E-21 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82866 299 500 6.8E-48 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 12-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:3.30.70.1430 39 820 0.0 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82693 565 674 1.23E-21 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:3.30.2090.10 180 277 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:3.30.70.1430 567 671 0.0 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.2E-89 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:3.30.70.1440 672 869 0.0 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:1.20.1640.10 9 512 0.0 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 SUPERFAMILY SSF82693 136 332 4.19E-21 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:3.30.70.1320 134 334 0.0 T 12-10-2018 vfu_B00431 b1776814c3c37b03ce14b4615088709a 1050 Gene3D G3DSA:3.30.2090.10 724 812 0.0 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 3.0E-14 T 12-10-2018 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 3.0E-14 T 12-10-2018 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 3.0E-14 T 12-10-2018 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 3.0E-14 T 12-10-2018 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 Gene3D G3DSA:3.40.430.10 1 159 6.2E-60 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 SUPERFAMILY SSF53597 1 159 9.97E-57 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 Pfam PF00186 Dihydrofolate reductase 3 159 3.3E-61 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 vfu_A03075 199bac70ec1c56a1ca32da9daf2ee506 159 PIRSF PIRSF000194 1 159 3.2E-63 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 2.8E-18 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 Gene3D G3DSA:3.40.50.620 323 475 4.8E-39 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00858 ce391a0c7250843000ff2998f067a478 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 1.4E-49 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_A00858 ce391a0c7250843000ff2998f067a478 476 SUPERFAMILY SSF53613 12 307 3.27E-58 T 12-10-2018 IPR029056 Ribokinase-like vfu_A00858 ce391a0c7250843000ff2998f067a478 476 Gene3D G3DSA:3.40.1190.20 5 310 7.7E-112 T 12-10-2018 IPR029056 Ribokinase-like vfu_A00858 ce391a0c7250843000ff2998f067a478 476 Pfam PF01467 Cytidylyltransferase-like 345 469 4.5E-16 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 SUPERFAMILY SSF52374 340 471 3.85E-24 T 12-10-2018 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 6.9E-127 T 12-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 3.9E-62 T 12-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 vfu_A00858 ce391a0c7250843000ff2998f067a478 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.994 T 12-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 SMART SM00849 13 209 1.4E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 Gene3D G3DSA:3.40.50.10890 202 390 2.4E-132 T 12-10-2018 vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 Pfam PF00753 Metallo-beta-lactamase superfamily 18 227 5.4E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 Pfam PF10996 Beta-Casp domain 234 364 3.6E-26 T 12-10-2018 IPR022712 Beta-Casp domain vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 SUPERFAMILY SSF56281 1 434 1.09E-123 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 437 3.5E-15 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 Gene3D G3DSA:3.60.15.10 6 425 2.4E-132 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A00097 637f4602e7e1c34ce7161499cf322fae 439 SMART SM01027 234 364 8.4E-53 T 12-10-2018 IPR022712 Beta-Casp domain vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 PIRSF PIRSF007519 1 765 0.0 T 12-10-2018 IPR012300 Peptidase M6, InhA vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 Pfam PF00801 PKD domain 843 911 4.0E-7 T 12-10-2018 IPR000601 PKD domain vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 Pfam PF00801 PKD domain 769 827 5.1E-8 T 12-10-2018 IPR000601 PKD domain vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 SMART SM00089 760 838 1.7E-14 T 12-10-2018 IPR022409 PKD/Chitinase domain vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 SMART SM00089 841 917 8.2E-5 T 12-10-2018 IPR022409 PKD/Chitinase domain vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 Pfam PF05547 Immune inhibitor A peptidase M6 105 747 2.2E-278 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 SUPERFAMILY SSF49299 756 839 3.53E-21 T 12-10-2018 IPR035986 PKD domain superfamily vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 SUPERFAMILY SSF49299 840 914 1.83E-7 T 12-10-2018 IPR035986 PKD domain superfamily vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 Gene3D G3DSA:2.60.40.10 752 837 2.6E-29 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 Gene3D G3DSA:2.60.40.10 838 918 7.1E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 SUPERFAMILY SSF55486 211 386 1.22E-19 T 12-10-2018 vfu_B00499 c605e8ad3ea4257ad604ae75668f3770 918 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 120 445 7.8E-83 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF17203 Single cache domain 3 38 169 1.4E-18 T 12-10-2018 IPR033463 Single cache domain 3 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF55890 323 409 6.41E-10 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF55785 218 307 1.92E-10 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:3.30.450.20 33 165 1.4E-38 T 12-10-2018 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF55874 404 535 2.1E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:3.30.565.10 380 539 7.0E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Gene3D G3DSA:3.30.450.20 200 311 7.0E-19 T 12-10-2018 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF00989 PAS fold 217 269 6.4E-6 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 321 373 1.6E-8 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 SMART SM00387 419 538 4.1E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 537 3.3E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02068 76430ed0bdf966c443f13bd8f02576ad 540 SUPERFAMILY SSF103190 39 170 6.67E-36 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B01243 a06a0be9677d92eb2e5bcdd1d8757909 107 PIRSF PIRSF029883 1 107 4.1E-38 T 12-10-2018 IPR025499 Pectin degradation protein KdgF vfu_B01243 a06a0be9677d92eb2e5bcdd1d8757909 107 Gene3D G3DSA:2.60.120.10 1 107 8.3E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01243 a06a0be9677d92eb2e5bcdd1d8757909 107 SUPERFAMILY SSF51182 11 104 2.65E-23 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01243 a06a0be9677d92eb2e5bcdd1d8757909 107 Pfam PF07883 Cupin domain 33 87 2.2E-14 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 Gene3D G3DSA:2.10.70.100 98 144 9.6E-11 T 12-10-2018 vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 SMART SM00086 101 144 1.9E-5 T 12-10-2018 IPR001610 PAC motif vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 45 151 1.1E-11 T 12-10-2018 IPR000014 PAS domain vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 Pfam PF08447 PAS fold 52 138 1.8E-19 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 Gene3D G3DSA:3.30.70.270 145 313 7.7E-49 T 12-10-2018 vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 SUPERFAMILY SSF55073 160 313 2.59E-41 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 311 2.7E-36 T 12-10-2018 IPR000160 GGDEF domain vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 SMART SM00267 144 313 2.4E-54 T 12-10-2018 IPR000160 GGDEF domain vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 Gene3D G3DSA:3.30.450.20 21 95 1.6E-13 T 12-10-2018 vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 SUPERFAMILY SSF55785 44 146 2.9E-17 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00634 5d198f330b61cb03a1f825b6567471fb 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 155 308 2.2E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 9.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.0E-53 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 Gene3D G3DSA:3.40.50.720 1 248 8.7E-91 T 12-10-2018 vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 219 1.9E-5 T 12-10-2018 vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 SUPERFAMILY SSF51735 8 247 1.33E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 12 246 9.5E-101 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 7.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 7.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.2E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01308 108b8f15358d01c1961c2e4888e3c4cb 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 245 1.9E-67 T 12-10-2018 vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 SUPERFAMILY SSF52540 3 269 8.99E-122 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.6E-62 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 Gene3D G3DSA:3.40.50.880 286 543 6.5E-106 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.9E-260 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 SUPERFAMILY SSF52317 289 539 4.44E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 Gene3D G3DSA:3.40.50.300 1 285 7.6E-134 T 12-10-2018 vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 Pfam PF06418 CTP synthase N-terminus 5 265 3.6E-125 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 vfu_A00845 e877ecbd3251536cd65406254dc19f31 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.349 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 28 252 5.4E-11 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 Gene3D G3DSA:1.10.287.470 61 134 8.0E-74 T 12-10-2018 vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 Gene3D G3DSA:2.40.420.20 245 337 2.8E-20 T 12-10-2018 vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 Gene3D G3DSA:2.40.30.170 20 244 8.0E-74 T 12-10-2018 vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 Gene3D G3DSA:2.40.50.100 26 169 8.0E-74 T 12-10-2018 vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 SUPERFAMILY SSF111369 16 258 8.63E-64 T 12-10-2018 vfu_B00432 ec90de97354dab7ef2a459fdc5031738 341 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 4 335 2.5E-81 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 12-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 Gene3D G3DSA:1.20.1440.90 302 387 8.9E-23 T 12-10-2018 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 12-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 SUPERFAMILY SSF51621 6 877 0.0 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 7.2E-287 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 3.0E-67 T 12-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A00618 2918501c8d276abc6caaebd42bb4cf8d 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.852 T 12-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 vfu_A02576 b20e27f3f0cb0547266935a831c80a61 159 Gene3D G3DSA:3.30.70.640 1 159 1.3E-70 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A02576 b20e27f3f0cb0547266935a831c80a61 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.2E-71 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A02576 b20e27f3f0cb0547266935a831c80a61 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.955 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A02576 b20e27f3f0cb0547266935a831c80a61 159 Pfam PF01967 MoaC family 15 150 2.9E-56 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A02576 b20e27f3f0cb0547266935a831c80a61 159 SUPERFAMILY SSF55040 11 155 1.7E-61 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 750 858 1.2E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 PRINTS PR00344 Bacterial sensor protein C-terminal signature 803 813 2.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 857 2.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 PRINTS PR00344 Bacterial sensor protein C-terminal signature 785 799 2.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 PRINTS PR00344 Bacterial sensor protein C-terminal signature 820 838 2.2E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SMART SM00387 749 860 3.9E-35 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:3.30.565.10 703 864 4.4E-42 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Pfam PF00512 His Kinase A (phospho-acceptor) domain 637 701 3.9E-17 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SMART SM00448 973 1089 2.4E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Pfam PF01627 Hpt domain 1116 1194 2.7E-9 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:3.40.190.10 26 212 3.2E-13 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SMART SM00062 15 225 0.0041 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:3.40.50.2300 972 1107 1.2E-29 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SUPERFAMILY SSF47226 1105 1202 2.22E-13 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SUPERFAMILY SSF55874 691 860 2.49E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SUPERFAMILY SSF53850 237 449 3.26E-16 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:3.40.190.10 94 184 3.2E-13 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:3.40.190.10 324 412 1.1E-20 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:3.40.190.10 237 447 1.1E-20 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SUPERFAMILY SSF47384 623 703 3.34E-17 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 245 441 2.6E-6 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 210 1.0E-8 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SUPERFAMILY SSF53850 34 212 1.74E-15 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:1.10.287.130 610 700 1.2E-21 T 12-10-2018 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SMART SM00388 637 702 4.1E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Pfam PF00072 Response regulator receiver domain 975 1089 9.3E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 SUPERFAMILY SSF52172 974 1104 2.28E-29 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00134 083ae14a780c4b789fd2e02edf74f330 1203 Gene3D G3DSA:1.20.120.160 1108 1203 2.1E-12 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.473 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 3.0E-107 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 SUPERFAMILY SSF55681 92 327 9.03E-83 T 12-10-2018 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 1.4E-114 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 Gene3D G3DSA:3.30.930.10 7 327 2.1E-127 T 12-10-2018 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 SUPERFAMILY SSF46589 13 99 1.36E-22 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 vfu_A02137 e18615f26770b9032c64a5e9a17adc63 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.5E-25 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 vfu_A01065 713d14d28b31e1fd2fb91d4de593e8c2 168 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 1.4E-52 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 vfu_A01065 713d14d28b31e1fd2fb91d4de593e8c2 168 SUPERFAMILY SSF101307 8 161 3.01E-47 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 vfu_A01065 713d14d28b31e1fd2fb91d4de593e8c2 168 PIRSF PIRSF006162 4 166 7.1E-56 T 12-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 PIRSF PIRSF000102 1 307 2.3E-61 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 310 57.62 T 12-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 Gene3D G3DSA:3.40.50.720 1 146 4.0E-65 T 12-10-2018 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 SUPERFAMILY SSF51735 1 145 9.36E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 Gene3D G3DSA:3.90.110.10 147 310 7.9E-53 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 12-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 310 7.1E-130 T 12-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 SUPERFAMILY SSF56327 147 309 6.64E-41 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 308 7.6E-49 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 vfu_A03084 c4ae45dd88d443d0f240be7ff0a40d08 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.2E-46 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 SUPERFAMILY SSF46894 124 219 3.97E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 Pfam PF00072 Response regulator receiver domain 5 114 1.7E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 Gene3D G3DSA:3.40.50.2300 1 119 2.2E-35 T 12-10-2018 vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 Gene3D G3DSA:1.10.10.10 120 227 3.9E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 6.5E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 SMART SM00862 145 219 1.8E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 SUPERFAMILY SSF52172 3 119 3.98E-35 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01503 20d3da0b489c9aebdaf86c517d4867d6 229 SMART SM00448 2 113 4.7E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01676 3815ec04cff42562a2c5bf85d312696d 181 Gene3D G3DSA:3.40.50.300 1 173 2.7E-44 T 12-10-2018 vfu_A01676 3815ec04cff42562a2c5bf85d312696d 181 SUPERFAMILY SSF52540 1 167 1.95E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01676 3815ec04cff42562a2c5bf85d312696d 181 ProSitePatterns PS00211 ABC transporters family signature. 102 116 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01676 3815ec04cff42562a2c5bf85d312696d 181 Pfam PF00005 ABC transporter 1 130 2.0E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01676 3815ec04cff42562a2c5bf85d312696d 181 SMART SM00382 1 178 3.5E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00367 1e5e6b69b3f71e45447df005a6a88391 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.233 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 vfu_A00367 1e5e6b69b3f71e45447df005a6a88391 127 TIGRFAM TIGR00494 crcB: protein CrcB 9 121 8.0E-30 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 vfu_A00367 1e5e6b69b3f71e45447df005a6a88391 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 119 6.0E-24 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 PIRSF PIRSF005962 8 391 1.0E-118 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 380 1.1E-101 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 Gene3D G3DSA:3.40.630.10 15 377 1.2E-125 T 12-10-2018 vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 Gene3D G3DSA:3.30.70.360 183 298 1.2E-125 T 12-10-2018 vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 SUPERFAMILY SSF55031 185 294 1.83E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 SUPERFAMILY SSF53187 4 390 1.26E-78 T 12-10-2018 vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 Pfam PF07687 Peptidase dimerisation domain 190 284 1.8E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_B00887 0a724ad5f8ed43f1022fa3e82e9deacd 391 Pfam PF01546 Peptidase family M20/M25/M40 75 389 3.1E-31 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 PIRSF PIRSF000538 1 486 1.8E-132 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 439 1.0E-35 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 Gene3D G3DSA:3.30.420.40 1 244 7.4E-86 T 12-10-2018 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 SUPERFAMILY SSF53067 245 479 4.26E-57 T 12-10-2018 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 TIGRFAM TIGR01312 XylB: xylulokinase 3 479 1.9E-187 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 SUPERFAMILY SSF53067 2 246 5.83E-74 T 12-10-2018 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 Gene3D G3DSA:3.30.420.40 245 483 1.1E-73 T 12-10-2018 vfu_B00467 fe04987d5dfb49451f3643f0935b99c9 486 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 1.1E-72 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 vfu_A03044 73767b2eebc182809eb6a872a8db1d36 233 SUPERFAMILY SSF54060 24 231 1.65E-92 T 12-10-2018 vfu_A03044 73767b2eebc182809eb6a872a8db1d36 233 Pfam PF04231 Endonuclease I 37 229 2.4E-43 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 vfu_A00852 f7ad76eca23c9ee615a6ff49b9d6833c 204 Gene3D G3DSA:1.20.58.220 2 203 5.9E-57 T 12-10-2018 IPR038078 PhoU-like domain superfamily vfu_A00852 f7ad76eca23c9ee615a6ff49b9d6833c 204 Pfam PF01865 Protein of unknown function DUF47 3 201 2.1E-61 T 12-10-2018 IPR018445 Putative phosphate transport regulator vfu_A00852 f7ad76eca23c9ee615a6ff49b9d6833c 204 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 3 203 3.2E-64 T 12-10-2018 IPR002727 Protein of unknown function DUF47 vfu_A00852 f7ad76eca23c9ee615a6ff49b9d6833c 204 SUPERFAMILY SSF109755 9 191 6.98E-15 T 12-10-2018 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 SUPERFAMILY SSF75138 223 347 1.23E-24 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Gene3D G3DSA:3.40.50.10950 393 703 7.9E-134 T 12-10-2018 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 400 700 5.7E-133 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 SUPERFAMILY SSF53659 386 703 2.55E-96 T 12-10-2018 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Gene3D G3DSA:3.40.1390.20 223 358 1.3E-13 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily vfu_A01541 c1062b8d5537494d840069f440355ebd 708 PIRSF PIRSF006107 1 708 0.0 T 12-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Gene3D G3DSA:3.40.50.300 1 222 1.3E-10 T 12-10-2018 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Pfam PF07085 DRTGG domain 227 338 4.8E-28 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Pfam PF01515 Phosphate acetyl/butaryl transferase 385 700 3.6E-125 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 SUPERFAMILY SSF52540 2 234 3.72E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Gene3D G3DSA:3.40.50.10750 523 676 7.9E-134 T 12-10-2018 vfu_A01541 c1062b8d5537494d840069f440355ebd 708 Pfam PF13500 AAA domain 1 223 4.3E-47 T 12-10-2018 vfu_B00435 99570b3924174a1b5d3e939374f388fd 384 Gene3D G3DSA:1.20.1250.20 197 380 1.9E-12 T 12-10-2018 vfu_B00435 99570b3924174a1b5d3e939374f388fd 384 SUPERFAMILY SSF103473 15 374 1.31E-35 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00435 99570b3924174a1b5d3e939374f388fd 384 Pfam PF07690 Major Facilitator Superfamily 16 225 3.3E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00435 99570b3924174a1b5d3e939374f388fd 384 Gene3D G3DSA:1.20.1250.20 11 189 5.2E-16 T 12-10-2018 vfu_A01351 806a59bcb2cc7e31be836ae8be119efa 214 SUPERFAMILY SSF53955 32 174 1.21E-38 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A01351 806a59bcb2cc7e31be836ae8be119efa 214 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 vfu_A01351 806a59bcb2cc7e31be836ae8be119efa 214 Pfam PF01464 Transglycosylase SLT domain 53 152 5.6E-27 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A01351 806a59bcb2cc7e31be836ae8be119efa 214 Gene3D G3DSA:1.10.530.10 34 183 1.7E-35 T 12-10-2018 vfu_A02619 b2e1decd9ecee9e48c5bd53f5a113636 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 168 8.7E-31 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 vfu_A02619 b2e1decd9ecee9e48c5bd53f5a113636 183 Gene3D G3DSA:3.60.21.10 1 182 2.8E-61 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_A02619 b2e1decd9ecee9e48c5bd53f5a113636 183 SUPERFAMILY SSF56300 1 164 1.06E-35 T 12-10-2018 vfu_A02619 b2e1decd9ecee9e48c5bd53f5a113636 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 158 4.0E-24 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 vfu_A02619 b2e1decd9ecee9e48c5bd53f5a113636 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 12-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 Pfam PF01047 MarR family 31 88 1.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 SMART SM00347 24 124 1.6E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 Gene3D G3DSA:1.10.10.10 4 136 1.6E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 SUPERFAMILY SSF46785 3 137 2.66E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01090 75a451df85f0ab46a51b12583f927ff1 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 261 286 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 Pfam PF01238 Phosphomannose isomerase type I 3 361 3.2E-84 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 Gene3D G3DSA:2.60.120.10 8 281 2.3E-133 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 Gene3D G3DSA:1.10.441.10 149 306 2.3E-133 T 12-10-2018 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 12-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 Gene3D G3DSA:2.60.120.10 307 388 2.3E-133 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 2 387 7.3E-95 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 34 49 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 6 24 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 261 280 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 226 241 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 242 261 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 280 299 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 8.6E-67 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 SUPERFAMILY SSF51182 3 379 2.26E-98 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01215 46d6db4e386e125e30fd8940d3e67090 395 PIRSF PIRSF001480 1 395 1.2E-103 T 12-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 487 1.4E-49 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 Pfam PF05683 Fumarase C-terminus 289 490 3.3E-83 T 12-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 Gene3D G3DSA:3.20.130.10 305 490 9.0E-61 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 PIRSF PIRSF001394 1 505 7.4E-216 T 12-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 3.4E-62 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.5E-97 T 12-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 vfu_A01783 ab838926d6928df957c23c08fb28721e 505 SUPERFAMILY SSF117457 317 489 5.75E-63 T 12-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 ProSitePatterns PS01218 TatC family signature. 154 173 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 2.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 2.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 2.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 2.5E-51 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 238 15.799 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 2.2E-75 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_A00417 9aacfc4f310ee143fbdcfb6331f7042c 247 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 1.1E-65 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 vfu_B00948 b12a6eab943c2b59d285a1692798980e 258 Gene3D G3DSA:3.20.20.150 1 258 1.1E-78 T 12-10-2018 vfu_B00948 b12a6eab943c2b59d285a1692798980e 258 PIRSF PIRSF006241 1 258 2.5E-98 T 12-10-2018 IPR026040 Hydroxypyruvate isomerase-like vfu_B00948 b12a6eab943c2b59d285a1692798980e 258 SUPERFAMILY SSF51658 1 258 3.04E-83 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily vfu_B00948 b12a6eab943c2b59d285a1692798980e 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 9.6E-33 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain vfu_A00055 73982390c66219782b4672820073a08e 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 79 5.2E-15 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_A00055 73982390c66219782b4672820073a08e 89 Gene3D G3DSA:3.10.20.30 2 89 5.6E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A00055 73982390c66219782b4672820073a08e 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 vfu_A00055 73982390c66219782b4672820073a08e 89 SUPERFAMILY SSF54292 1 87 1.04E-26 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A01876 3ef137a649790aa98b7bd42cadb9117f 299 Gene3D G3DSA:3.30.70.100 202 293 4.8E-6 T 12-10-2018 vfu_A01876 3ef137a649790aa98b7bd42cadb9117f 299 Pfam PF00924 Mechanosensitive ion channel 93 290 3.1E-35 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_A01876 3ef137a649790aa98b7bd42cadb9117f 299 SUPERFAMILY SSF50182 132 193 3.92E-14 T 12-10-2018 IPR010920 LSM domain superfamily vfu_A01876 3ef137a649790aa98b7bd42cadb9117f 299 Gene3D G3DSA:2.30.30.60 147 195 2.8E-8 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily vfu_A01876 3ef137a649790aa98b7bd42cadb9117f 299 SUPERFAMILY SSF82689 204 292 9.94E-7 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 vfu_A00866 8348ec88d185bf36dfe97af1757f1579 65 SUPERFAMILY SSF57716 5 63 5.42E-22 T 12-10-2018 vfu_A00866 8348ec88d185bf36dfe97af1757f1579 65 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 4 60 18.658 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 vfu_A00866 8348ec88d185bf36dfe97af1757f1579 65 Pfam PF03884 DNA gyrase inhibitor YacG 8 58 6.3E-25 T 12-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 vfu_A00866 8348ec88d185bf36dfe97af1757f1579 65 Gene3D G3DSA:3.30.50.10 1 65 6.2E-25 T 12-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 vfu_A00713 b1acad3936a86ac3448a2f80159d850d 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 182 2.8E-87 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ vfu_A00713 b1acad3936a86ac3448a2f80159d850d 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 23 181 2.1E-75 T 12-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ vfu_A00713 b1acad3936a86ac3448a2f80159d850d 183 Gene3D G3DSA:3.40.30.10 19 179 4.9E-6 T 12-10-2018 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PIRSF PIRSF016599 5 489 4.1E-212 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 SUPERFAMILY SSF53187 16 486 1.48E-59 T 12-10-2018 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 2.9E-89 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Gene3D G3DSA:3.40.630.10 376 490 1.2E-22 T 12-10-2018 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Gene3D G3DSA:3.40.630.10 1 235 2.7E-62 T 12-10-2018 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 13 486 2.5E-178 T 12-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Pfam PF07687 Peptidase dimerisation domain 211 295 1.2E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_A01044 29dbc2bfc4f5189a3eafadaf6d8f9d23 490 Pfam PF01546 Peptidase family M20/M25/M40 77 471 1.2E-19 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_A02989 71c7b27b8e910e7908e2d5251be19a44 94 Gene3D G3DSA:1.20.5.400 21 63 2.3E-8 T 12-10-2018 vfu_A02989 71c7b27b8e910e7908e2d5251be19a44 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.124 T 12-10-2018 IPR023081 Cell division protein FtsB vfu_A02989 71c7b27b8e910e7908e2d5251be19a44 94 Pfam PF04977 Septum formation initiator 11 89 3.2E-26 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC vfu_A01164 81f887b1b274d2692e30be34a538515c 229 SUPERFAMILY SSF55166 22 176 2.31E-18 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 vfu_A01164 81f887b1b274d2692e30be34a538515c 229 Gene3D G3DSA:3.30.1380.10 3 190 1.4E-32 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 vfu_A01164 81f887b1b274d2692e30be34a538515c 229 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 26 179 1.6E-33 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SUPERFAMILY SSF58104 244 430 2.88E-50 T 12-10-2018 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 Pfam PF08447 PAS fold 165 247 2.5E-10 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 Pfam PF08447 PAS fold 45 128 1.4E-9 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 136 6.7E-12 T 12-10-2018 IPR000014 PAS domain vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 258 6.0E-12 T 12-10-2018 IPR000014 PAS domain vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 275 431 3.1E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00283 230 431 2.4E-21 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SUPERFAMILY SSF55785 153 256 2.09E-21 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00086 92 135 75.0 T 12-10-2018 IPR001610 PAC motif vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00086 213 255 6.5E-5 T 12-10-2018 IPR001610 PAC motif vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 382 1.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 280 1.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 324 351 1.2E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 Gene3D G3DSA:3.30.450.20 5 129 2.7E-16 T 12-10-2018 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SUPERFAMILY SSF55785 32 131 8.72E-19 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00091 18 89 7.4 T 12-10-2018 IPR000014 PAS domain vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 SMART SM00091 140 208 0.35 T 12-10-2018 IPR000014 PAS domain vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 Gene3D G3DSA:3.30.450.20 130 242 1.7E-11 T 12-10-2018 vfu_A02561 61a7522158fe075ea46cfafe06f4d0bd 432 Gene3D G3DSA:1.10.287.950 243 432 8.2E-41 T 12-10-2018 vfu_B00915 72b88d78b679bd24b1c7b33f57c8e1c8 306 Pfam PF03466 LysR substrate binding domain 97 299 1.7E-22 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00915 72b88d78b679bd24b1c7b33f57c8e1c8 306 Gene3D G3DSA:3.40.190.290 99 300 5.0E-38 T 12-10-2018 vfu_B00915 72b88d78b679bd24b1c7b33f57c8e1c8 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 71 8.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00915 72b88d78b679bd24b1c7b33f57c8e1c8 306 SUPERFAMILY SSF53850 99 299 3.26E-25 T 12-10-2018 vfu_B00915 72b88d78b679bd24b1c7b33f57c8e1c8 306 SUPERFAMILY SSF46785 11 96 2.42E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00915 72b88d78b679bd24b1c7b33f57c8e1c8 306 Gene3D G3DSA:1.10.10.10 11 97 3.8E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02325 431b72c16e0465843c3966d9465bc723 399 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 10 382 1.3E-91 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 vfu_A02325 431b72c16e0465843c3966d9465bc723 399 SUPERFAMILY SSF51338 10 387 1.65E-9 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02325 431b72c16e0465843c3966d9465bc723 399 Gene3D G3DSA:2.30.40.10 16 383 2.5E-122 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02325 431b72c16e0465843c3966d9465bc723 399 Pfam PF01979 Amidohydrolase family 57 385 5.3E-23 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_A02325 431b72c16e0465843c3966d9465bc723 399 Gene3D G3DSA:3.20.20.140 60 356 2.5E-122 T 12-10-2018 vfu_A02325 431b72c16e0465843c3966d9465bc723 399 SUPERFAMILY SSF51556 60 356 1.49E-97 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A02325 431b72c16e0465843c3966d9465bc723 399 PIRSF PIRSF038994 6 389 6.6E-121 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 SUPERFAMILY SSF51735 2 156 1.97E-11 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 Gene3D G3DSA:3.40.50.720 2 188 6.5E-42 T 12-10-2018 vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 Gene3D G3DSA:1.10.1040.10 189 315 1.1E-29 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 189 308 1.1E-22 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 157 1.5E-31 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 312 9.5E-63 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 vfu_B01348 aff93c10fdf97143e153e3c374462caa 316 SUPERFAMILY SSF48179 188 309 4.08E-22 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00996 03cce45cccc02700285c25c669c47de4 291 SUPERFAMILY SSF46785 2 77 2.59E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00996 03cce45cccc02700285c25c669c47de4 291 SUPERFAMILY SSF53850 80 279 4.16E-31 T 12-10-2018 vfu_B00996 03cce45cccc02700285c25c669c47de4 291 Gene3D G3DSA:3.40.190.290 83 278 1.5E-35 T 12-10-2018 vfu_B00996 03cce45cccc02700285c25c669c47de4 291 Gene3D G3DSA:1.10.10.10 1 82 6.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00996 03cce45cccc02700285c25c669c47de4 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 55 6.6E-11 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00996 03cce45cccc02700285c25c669c47de4 291 Pfam PF03466 LysR substrate binding domain 80 277 3.1E-27 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00827 566ae988c15884753107e8fc29094bd5 161 Gene3D G3DSA:3.10.180.10 1 150 2.2E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00827 566ae988c15884753107e8fc29094bd5 161 SUPERFAMILY SSF54593 1 150 4.97E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00827 566ae988c15884753107e8fc29094bd5 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 vfu_B00827 566ae988c15884753107e8fc29094bd5 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 8.8E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_B00464 0f944c79d24e3ce10e4a559d2a9c05ca 219 Gene3D G3DSA:3.40.109.10 1 219 3.4E-48 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_B00464 0f944c79d24e3ce10e4a559d2a9c05ca 219 Pfam PF00881 Nitroreductase family 10 194 4.8E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 vfu_B00464 0f944c79d24e3ce10e4a559d2a9c05ca 219 SUPERFAMILY SSF55469 6 217 6.54E-53 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A01376 7a1348ebc541354a6181395757121165 254 Gene3D G3DSA:1.10.10.10 10 82 2.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01376 7a1348ebc541354a6181395757121165 254 SMART SM00346 11 101 5.9E-10 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_A01376 7a1348ebc541354a6181395757121165 254 SUPERFAMILY SSF46785 13 80 1.72E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01376 7a1348ebc541354a6181395757121165 254 SUPERFAMILY SSF55781 77 253 4.77E-25 T 12-10-2018 vfu_A01376 7a1348ebc541354a6181395757121165 254 Pfam PF09339 IclR helix-turn-helix domain 13 63 4.5E-10 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_A01376 7a1348ebc541354a6181395757121165 254 Gene3D G3DSA:3.30.450.40 85 251 2.4E-22 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_A01376 7a1348ebc541354a6181395757121165 254 Pfam PF01614 Bacterial transcriptional regulator 131 225 2.3E-9 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal vfu_A01914 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05144 Phage replication protein CRI 2 277 1.8E-75 T 12-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 vfu_A01914 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05155 Phage X family 322 413 1.3E-32 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 vfu_A01914 fe462541a3a6be82c95e1a064b855f18 431 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 412 1.2E-112 T 12-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 vfu_B00215 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05144 Phage replication protein CRI 2 277 1.8E-75 T 12-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 vfu_B00215 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05155 Phage X family 322 413 1.3E-32 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 vfu_B00215 fe462541a3a6be82c95e1a064b855f18 431 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 412 1.2E-112 T 12-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 vfu_B00221 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05144 Phage replication protein CRI 2 277 1.8E-75 T 12-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 vfu_B00221 fe462541a3a6be82c95e1a064b855f18 431 Pfam PF05155 Phage X family 322 413 1.3E-32 T 12-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 vfu_B00221 fe462541a3a6be82c95e1a064b855f18 431 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 412 1.2E-112 T 12-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 SMART SM00836 583 686 0.0019 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 8.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 8.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 8.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 8.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 8.8E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.2E-299 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 Pfam PF05746 DALR anticodon binding domain 580 677 6.3E-10 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.875 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 SUPERFAMILY SSF109604 346 489 3.66E-13 T 12-10-2018 vfu_A00304 d05b3c15645f03fc4fe151f0f99a2917 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 2.5E-204 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A02298 8ba2d40e9c37ed676d1480ff0ab2547f 165 Pfam PF00072 Response regulator receiver domain 6 125 8.3E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02298 8ba2d40e9c37ed676d1480ff0ab2547f 165 SUPERFAMILY SSF52172 1 137 6.4E-19 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02298 8ba2d40e9c37ed676d1480ff0ab2547f 165 Gene3D G3DSA:3.40.50.2300 5 134 1.7E-17 T 12-10-2018 vfu_A02298 8ba2d40e9c37ed676d1480ff0ab2547f 165 SMART SM00448 4 125 4.0E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02913 f0aaa09c38ec87c69780a9032887783f 271 Gene3D G3DSA:3.40.50.1980 21 138 8.9E-36 T 12-10-2018 vfu_A02913 f0aaa09c38ec87c69780a9032887783f 271 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 270 50.211 T 12-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 vfu_A02913 f0aaa09c38ec87c69780a9032887783f 271 SUPERFAMILY SSF53807 20 266 1.33E-60 T 12-10-2018 vfu_A02913 f0aaa09c38ec87c69780a9032887783f 271 Gene3D G3DSA:3.40.50.1980 141 269 1.3E-30 T 12-10-2018 vfu_A02913 f0aaa09c38ec87c69780a9032887783f 271 Pfam PF01497 Periplasmic binding protein 24 245 2.0E-30 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_B00620 ae769a137a80536aa0356a4ad3d7d9bc 308 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 vfu_B00620 ae769a137a80536aa0356a4ad3d7d9bc 308 SUPERFAMILY SSF52768 12 303 2.88E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily vfu_B00620 ae769a137a80536aa0356a4ad3d7d9bc 308 PIRSF PIRSF036979 11 305 2.4E-97 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00620 ae769a137a80536aa0356a4ad3d7d9bc 308 TIGRFAM TIGR01230 agmatinase: agmatinase 23 299 6.9E-93 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 vfu_B00620 ae769a137a80536aa0356a4ad3d7d9bc 308 Pfam PF00491 Arginase family 33 297 4.7E-89 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00620 ae769a137a80536aa0356a4ad3d7d9bc 308 Gene3D G3DSA:3.40.800.10 1 308 1.0E-105 T 12-10-2018 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Gene3D G3DSA:1.10.10.10 1 84 9.6E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 SUPERFAMILY SSF53850 89 294 1.93E-36 T 12-10-2018 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Gene3D G3DSA:3.40.190.10 91 281 4.8E-65 T 12-10-2018 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.8E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Gene3D G3DSA:3.40.190.10 164 267 4.8E-65 T 12-10-2018 vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 Pfam PF03466 LysR substrate binding domain 89 287 8.7E-42 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00627 bbcbadbe9ee4f3a5cdd87ae9f6034ad3 298 SUPERFAMILY SSF46785 1 86 1.94E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01404 bbb75639eddc22ed4c972416f73a27ea 118 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 8 118 14.188 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01404 bbb75639eddc22ed4c972416f73a27ea 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 82 98 8.2E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01404 bbb75639eddc22ed4c972416f73a27ea 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 48 64 8.2E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01404 bbb75639eddc22ed4c972416f73a27ea 118 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 103 116 8.2E-10 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01404 bbb75639eddc22ed4c972416f73a27ea 118 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 46 117 5.7E-14 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01404 bbb75639eddc22ed4c972416f73a27ea 118 Pfam PF02049 Flagellar hook-basal body complex protein FliE 44 118 1.7E-23 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01159 0dd75c74d29f23c047362d685172b3f5 155 Pfam PF00578 AhpC/TSA family 7 134 1.8E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_A01159 0dd75c74d29f23c047362d685172b3f5 155 Gene3D G3DSA:3.40.30.10 2 155 3.9E-45 T 12-10-2018 vfu_A01159 0dd75c74d29f23c047362d685172b3f5 155 SUPERFAMILY SSF52833 4 154 1.74E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 8.6E-36 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF51905 5 438 2.09E-71 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 8.9E-274 T 12-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF56425 236 356 2.69E-42 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:3.90.700.10 246 350 2.3E-169 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 SUPERFAMILY SSF46977 451 588 4.84E-46 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Pfam PF00890 FAD binding domain 9 405 7.5E-118 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 PIRSF PIRSF000171 1 580 5.0E-48 T 12-10-2018 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:1.20.58.100 432 547 4.1E-38 T 12-10-2018 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:3.50.50.60 9 416 2.3E-169 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.0E-239 T 12-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01232 06407830b6e8cfa6d9a0b5adc34bf4c3 588 Gene3D G3DSA:4.10.80.40 548 588 3.9E-23 T 12-10-2018 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 9.1E-23 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 SUPERFAMILY SSF64518 1 376 4.45E-93 T 12-10-2018 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 Pfam PF07196 Flagellin hook IN motif 199 245 5.0E-9 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 Gene3D G3DSA:1.10.8.410 328 377 3.4E-19 T 12-10-2018 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 Gene3D G3DSA:1.20.1330.10 44 327 4.6E-77 T 12-10-2018 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 Gene3D G3DSA:3.30.70.2120 172 275 4.6E-77 T 12-10-2018 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 7.6E-42 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 PRINTS PR00207 Flagellin signature 76 95 3.8E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 PRINTS PR00207 Flagellin signature 111 134 3.8E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01178 7034b8f12d7b5ff5c555fb40a47a93c6 378 PRINTS PR00207 Flagellin signature 37 54 3.8E-25 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_B01242 e1e9830c8a8e0055c6349049532960af 211 Pfam PF12408 Ribose-5-phosphate isomerase 163 209 1.3E-21 T 12-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal vfu_B01242 e1e9830c8a8e0055c6349049532960af 211 Gene3D G3DSA:3.40.1400.10 1 211 3.6E-99 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 vfu_B01242 e1e9830c8a8e0055c6349049532960af 211 SUPERFAMILY SSF89623 1 160 1.44E-35 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 vfu_B01242 e1e9830c8a8e0055c6349049532960af 211 Pfam PF02502 Ribose/Galactose Isomerase 3 153 3.4E-28 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 vfu_A00696 36296a2f9550ff95795c2fddaef15ba7 150 Gene3D G3DSA:3.40.630.30 1 149 9.9E-43 T 12-10-2018 vfu_A00696 36296a2f9550ff95795c2fddaef15ba7 150 SUPERFAMILY SSF55729 1 149 3.84E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00696 36296a2f9550ff95795c2fddaef15ba7 150 Pfam PF13673 Acetyltransferase (GNAT) domain 46 148 1.5E-16 T 12-10-2018 IPR000182 GNAT domain vfu_A03118 f0a7e4e348b49544c9d54ddbe9207915 481 PIRSF PIRSF028153 1 481 4.3E-192 T 12-10-2018 IPR016871 MSHA biogenesis protein, MshI vfu_A03118 f0a7e4e348b49544c9d54ddbe9207915 481 SUPERFAMILY SSF53067 45 155 3.63E-12 T 12-10-2018 vfu_B00581 7053c972cc2443150e391b723d7724ff 300 Gene3D G3DSA:1.10.10.10 3 91 3.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00581 7053c972cc2443150e391b723d7724ff 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 3.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00581 7053c972cc2443150e391b723d7724ff 300 Pfam PF03466 LysR substrate binding domain 87 289 1.5E-48 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00581 7053c972cc2443150e391b723d7724ff 300 Gene3D G3DSA:3.40.190.290 92 291 7.0E-65 T 12-10-2018 vfu_B00581 7053c972cc2443150e391b723d7724ff 300 SUPERFAMILY SSF46785 8 110 1.4E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00581 7053c972cc2443150e391b723d7724ff 300 SUPERFAMILY SSF53850 87 291 4.34E-50 T 12-10-2018 vfu_A02677 59ec6c3bf950e4a88ca1ea50bf327af7 269 Pfam PF03180 NLPA lipoprotein 33 269 5.1E-98 T 12-10-2018 IPR004872 Lipoprotein NlpA family vfu_A02677 59ec6c3bf950e4a88ca1ea50bf327af7 269 Gene3D G3DSA:3.40.190.10 115 219 7.7E-93 T 12-10-2018 vfu_A02677 59ec6c3bf950e4a88ca1ea50bf327af7 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 1.8E-125 T 12-10-2018 IPR004872 Lipoprotein NlpA family vfu_A02677 59ec6c3bf950e4a88ca1ea50bf327af7 269 PIRSF PIRSF002854 1 269 9.5E-100 T 12-10-2018 IPR004872 Lipoprotein NlpA family vfu_A02677 59ec6c3bf950e4a88ca1ea50bf327af7 269 Gene3D G3DSA:3.40.190.10 34 263 7.7E-93 T 12-10-2018 vfu_A02677 59ec6c3bf950e4a88ca1ea50bf327af7 269 SUPERFAMILY SSF53850 32 269 1.73E-79 T 12-10-2018 vfu_A01797 699ec68ba3ffcf961b04b4608f0c0773 98 Gene3D G3DSA:3.30.70.100 1 97 2.2E-28 T 12-10-2018 vfu_A01797 699ec68ba3ffcf961b04b4608f0c0773 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 2.6E-19 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain vfu_A01797 699ec68ba3ffcf961b04b4608f0c0773 98 SUPERFAMILY SSF54909 3 82 3.64E-25 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 Gene3D G3DSA:3.40.50.2300 561 683 3.3E-38 T 12-10-2018 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 307 411 1.0E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 SMART SM00448 565 679 1.9E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 SUPERFAMILY SSF55874 250 416 1.96E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 Gene3D G3DSA:1.10.287.130 167 259 3.8E-5 T 12-10-2018 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 Pfam PF00072 Response regulator receiver domain 567 679 5.5E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 SUPERFAMILY SSF52172 565 683 3.42E-37 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 SMART SM00387 305 413 8.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 Gene3D G3DSA:3.30.565.10 265 417 1.7E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 410 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 357 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 391 1.3E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00270 6e2853e78b2fc79e0fdeca54c547a936 683 SUPERFAMILY SSF47384 173 210 2.35E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02490 9f2a44ac28c7a52f0a9331dd33d70fe9 276 Gene3D G3DSA:3.40.50.150 1 273 8.6E-79 T 12-10-2018 vfu_A02490 9f2a44ac28c7a52f0a9331dd33d70fe9 276 SUPERFAMILY SSF53335 4 253 1.64E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02490 9f2a44ac28c7a52f0a9331dd33d70fe9 276 PIRSF PIRSF018249 1 272 1.7E-86 T 12-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 vfu_A02490 9f2a44ac28c7a52f0a9331dd33d70fe9 276 Pfam PF13847 Methyltransferase domain 86 224 4.7E-14 T 12-10-2018 IPR025714 Methyltransferase domain vfu_B01131 18ed4f0e2712d8473b00f582b5a2446d 346 Gene3D G3DSA:3.40.50.720 6 315 2.6E-119 T 12-10-2018 vfu_B01131 18ed4f0e2712d8473b00f582b5a2446d 346 SUPERFAMILY SSF51735 4 204 1.69E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01131 18ed4f0e2712d8473b00f582b5a2446d 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 202 2.1E-8 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 vfu_B01131 18ed4f0e2712d8473b00f582b5a2446d 346 Gene3D G3DSA:3.30.360.10 128 329 2.6E-119 T 12-10-2018 vfu_B01131 18ed4f0e2712d8473b00f582b5a2446d 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 122 2.2E-22 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 933 4.8E-55 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Gene3D G3DSA:1.10.287.1150 85 167 1.7E-30 T 12-10-2018 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF00676 Dehydrogenase E1 component 221 514 4.6E-49 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Gene3D G3DSA:3.40.50.12470 557 803 5.5E-173 T 12-10-2018 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Gene3D G3DSA:3.40.50.970 168 534 3.6E-146 T 12-10-2018 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 SMART SM00861 594 787 3.3E-62 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 5.2E-14 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Gene3D G3DSA:3.40.50.11610 724 930 5.5E-173 T 12-10-2018 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 SUPERFAMILY SSF52518 577 794 1.68E-52 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 PIRSF PIRSF000157 1 935 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 SUPERFAMILY SSF52518 122 546 4.27E-88 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A01234 c8a22921a33a95b42d9e0e2a517b873f 936 Pfam PF02779 Transketolase, pyrimidine binding domain 594 788 1.0E-65 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 24 318 3.0E-174 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 Gene3D G3DSA:3.30.930.10 10 231 2.0E-111 T 12-10-2018 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 Gene3D G3DSA:1.20.58.180 232 314 3.9E-33 T 12-10-2018 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 26 309 8.0E-150 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 SUPERFAMILY SSF55681 25 309 1.89E-134 T 12-10-2018 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 24 310 62.004 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 270 286 5.6E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 179 194 5.6E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 130 154 5.6E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 78 93 5.6E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 99 119 5.6E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_A00303 f3afba3f175e0ea9219730ed2fbae6eb 322 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 176 5.6E-71 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 109 219 7.1E-21 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 274 431 2.9E-45 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 Gene3D G3DSA:3.30.360.10 268 433 5.8E-114 T 12-10-2018 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 110 443 1.8E-113 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 227 240 2.6E-16 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 290 306 2.6E-16 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 263 281 2.6E-16 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 346 363 2.6E-16 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 Gene3D G3DSA:3.40.50.720 110 443 5.8E-114 T 12-10-2018 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 SUPERFAMILY SSF51735 109 285 2.56E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 SUPERFAMILY SSF55347 269 432 2.71E-53 T 12-10-2018 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 SMART SM00846 108 269 2.7E-52 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_B01301 c1f4722ccfccb1bc4ccb7189093b0bb3 459 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 267 274 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A01850 13965ca34dfca02dfe8eda485b87c3a9 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 8.1E-29 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 vfu_A01850 13965ca34dfca02dfe8eda485b87c3a9 134 Gene3D G3DSA:3.30.420.270 60 129 7.1E-12 T 12-10-2018 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.392 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 Gene3D G3DSA:3.20.20.70 1 277 1.5E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 SUPERFAMILY SSF110921 393 498 1.02E-20 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 Gene3D G3DSA:1.10.238.260 280 393 4.7E-32 T 12-10-2018 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 Gene3D G3DSA:3.30.160.270 394 500 3.0E-7 T 12-10-2018 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 SUPERFAMILY SSF51569 1 291 7.87E-100 T 12-10-2018 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 Pfam PF00682 HMGL-like 4 273 4.2E-100 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 SMART SM00917 369 499 2.1E-28 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.8E-30 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 2.8E-237 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A00808 0602ea235a29021bad942f1fc4164f3a 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 Gene3D G3DSA:1.10.490.80 593 696 5.3E-9 T 12-10-2018 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 236 250 6.0E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 32 45 6.0E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 69 88 6.0E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 185 202 6.0E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 155 173 6.0E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 136 152 6.0E-55 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 Gene3D G3DSA:1.10.8.540 503 590 5.6E-12 T 12-10-2018 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 141 164 - T 12-10-2018 IPR025505 FHIPEP conserved site vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 Pfam PF00771 FHIPEP family 25 688 2.1E-239 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 Gene3D G3DSA:3.40.30.60 359 502 2.1E-43 T 12-10-2018 vfu_A01394 3d3c642366ce1c4bc60f2c016e64beb9 697 PIRSF PIRSF005419 2 697 5.6E-220 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A00911 57f429947045a60666c14143c0af05bd 331 SUPERFAMILY SSF52540 10 262 4.06E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00911 57f429947045a60666c14143c0af05bd 331 Pfam PF00005 ABC transporter 35 192 3.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00911 57f429947045a60666c14143c0af05bd 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00911 57f429947045a60666c14143c0af05bd 331 Gene3D G3DSA:3.40.50.300 8 331 2.0E-79 T 12-10-2018 vfu_A00911 57f429947045a60666c14143c0af05bd 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 3.5E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A00911 57f429947045a60666c14143c0af05bd 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 3.2E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A00911 57f429947045a60666c14143c0af05bd 331 SMART SM00382 43 241 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00247 c99ba8aff25003e8d32b4532eed3e600 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 3.5E-30 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 vfu_B00247 c99ba8aff25003e8d32b4532eed3e600 179 SUPERFAMILY SSF81342 5 175 2.51E-35 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 vfu_B00459 d9068e09444f7a1937d18873cffc969e 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 172 1.2E-16 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain vfu_B00459 d9068e09444f7a1937d18873cffc969e 543 SMART SM00304 211 265 3.7E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00459 d9068e09444f7a1937d18873cffc969e 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 505 4.3E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00459 d9068e09444f7a1937d18873cffc969e 543 SMART SM00283 280 541 4.5E-70 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00459 d9068e09444f7a1937d18873cffc969e 543 Gene3D G3DSA:1.10.287.950 211 543 2.7E-76 T 12-10-2018 vfu_B00459 d9068e09444f7a1937d18873cffc969e 543 SUPERFAMILY SSF58104 237 542 1.05E-72 T 12-10-2018 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.10.20.590 797 857 4.1E-23 T 12-10-2018 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF47323 661 857 1.64E-34 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 12-10-2018 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 614 650 1.1E-7 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 2.1E-8 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 5.1E-26 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF52374 4 667 2.41E-147 T 12-10-2018 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 821 1.2E-14 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.9E-79 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.382 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 6.8E-52 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 SUPERFAMILY SSF50677 226 415 2.3E-57 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A02646 b58d6c4a990cee26af2b7fa7295b832d 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 12-10-2018 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 Pfam PF04060 Putative Fe-S cluster 44 75 8.8E-15 T 12-10-2018 IPR007202 4Fe-4S domain GO:0051536 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 Gene3D G3DSA:3.30.70.20 82 181 1.7E-22 T 12-10-2018 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 Pfam PF14697 4Fe-4S dicluster domain 107 161 5.1E-18 T 12-10-2018 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 Gene3D G3DSA:1.10.15.40 38 81 7.1E-8 T 12-10-2018 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 PIRSF PIRSF005784 3 188 1.2E-86 T 12-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.9E-87 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 SUPERFAMILY SSF54862 37 173 1.13E-31 T 12-10-2018 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.22 T 12-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 vfu_A02586 3bf41bad359c9b059a6acfbe4d835cc6 199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02886 cd2b49fabbacc324144cbd2c35e40258 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.418 T 12-10-2018 IPR005583 Peroxide stress protein YaaA vfu_A02886 cd2b49fabbacc324144cbd2c35e40258 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.6E-93 T 12-10-2018 IPR005583 Peroxide stress protein YaaA vfu_B01182 67404362614f1832a8cc33e2de70c684 158 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 148 7.6E-45 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN vfu_B01182 67404362614f1832a8cc33e2de70c684 158 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 12 146 1.4E-39 T 12-10-2018 IPR017734 Type VI secretion system, lipoprotein SciN vfu_B01182 67404362614f1832a8cc33e2de70c684 158 Gene3D G3DSA:2.60.40.4150 24 155 2.3E-34 T 12-10-2018 IPR038706 Type VI secretion protein SciN-like superfamily vfu_A01484 0df4dcf70786b514ce20f9b1ad7836d9 242 Gene3D G3DSA:3.90.470.20 123 240 5.7E-7 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 vfu_A01484 0df4dcf70786b514ce20f9b1ad7836d9 242 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 123 218 1.8E-11 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 vfu_A01484 0df4dcf70786b514ce20f9b1ad7836d9 242 SUPERFAMILY SSF56214 123 236 1.45E-13 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 vfu_A01484 0df4dcf70786b514ce20f9b1ad7836d9 242 PRINTS PR01399 Enterobactin synthetase component D signature 55 75 3.4E-16 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 vfu_A01484 0df4dcf70786b514ce20f9b1ad7836d9 242 PRINTS PR01399 Enterobactin synthetase component D signature 85 103 3.4E-16 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 vfu_A01484 0df4dcf70786b514ce20f9b1ad7836d9 242 PRINTS PR01399 Enterobactin synthetase component D signature 166 182 3.4E-16 T 12-10-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 SUPERFAMILY SSF51445 292 759 8.43E-74 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Pfam PF06483 Chitinase C 783 948 1.2E-72 T 12-10-2018 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 SUPERFAMILY SSF54556 605 725 3.91E-13 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 SMART SM00636 298 755 2.3E-119 T 12-10-2018 IPR011583 Chitinase II GO:0008061 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 SMART SM00495 14 60 1.9E-18 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 SMART SM00495 977 1022 1.5E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Gene3D G3DSA:3.20.20.80 625 792 9.1E-9 T 12-10-2018 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Gene3D G3DSA:2.60.40.10 73 165 1.8E-21 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Gene3D G3DSA:2.60.40.10 170 259 5.7E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Gene3D G3DSA:3.20.20.80 277 624 3.0E-80 T 12-10-2018 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Gene3D G3DSA:2.10.10.20 10 64 3.7E-14 T 12-10-2018 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 SUPERFAMILY SSF51055 2 63 7.19E-17 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 Pfam PF00704 Glycosyl hydrolases family 18 299 755 6.5E-86 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 vfu_B00330 76ce5d109370e076a0107b6f17c4dbd7 1025 ProSitePatterns PS01095 Chitinases family 18 active site. 447 455 - T 12-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 vfu_B00599 0fbfa759b1dbcebe05d81e5205211a2a 246 Pfam PF00563 EAL domain 31 236 2.0E-12 T 12-10-2018 IPR001633 EAL domain vfu_B00599 0fbfa759b1dbcebe05d81e5205211a2a 246 SUPERFAMILY SSF141868 31 235 2.62E-15 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00599 0fbfa759b1dbcebe05d81e5205211a2a 246 Gene3D G3DSA:3.20.20.450 30 236 2.0E-16 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00921 16575024ef76f19066cfedc34c36f579 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.2E-19 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 vfu_A00921 16575024ef76f19066cfedc34c36f579 113 Gene3D G3DSA:2.60.300.12 7 113 1.6E-32 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 vfu_A00921 16575024ef76f19066cfedc34c36f579 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.8E-37 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 vfu_A00921 16575024ef76f19066cfedc34c36f579 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 vfu_A00921 16575024ef76f19066cfedc34c36f579 113 SUPERFAMILY SSF89360 8 102 7.26E-30 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 vfu_A00921 16575024ef76f19066cfedc34c36f579 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.835 T 12-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Gene3D G3DSA:1.10.10.60 381 446 5.4E-11 T 12-10-2018 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Pfam PF02954 Bacterial regulatory protein, Fis family 402 441 3.3E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Gene3D G3DSA:3.40.50.300 140 315 1.2E-56 T 12-10-2018 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 SUPERFAMILY SSF52540 148 370 2.19E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Gene3D G3DSA:1.10.8.60 316 376 1.7E-14 T 12-10-2018 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Gene3D G3DSA:3.40.50.2300 6 139 4.0E-35 T 12-10-2018 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 SUPERFAMILY SSF46689 389 443 1.57E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Pfam PF00072 Response regulator receiver domain 9 118 1.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 SMART SM00382 168 308 5.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 Pfam PF00158 Sigma-54 interaction domain 148 311 9.5E-63 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 SMART SM00448 7 118 1.5E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00729 b822703e163cda7b9df219ce37ab3a87 462 SUPERFAMILY SSF52172 8 192 3.42E-41 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00031 17fc79b0791bb0af21bf39a619af722c 390 Gene3D G3DSA:2.70.70.10 250 390 9.6E-34 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A00031 17fc79b0791bb0af21bf39a619af722c 390 Gene3D G3DSA:1.20.5.340 34 133 4.2E-5 T 12-10-2018 vfu_A00031 17fc79b0791bb0af21bf39a619af722c 390 SUPERFAMILY SSF51261 181 388 9.42E-47 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A00031 17fc79b0791bb0af21bf39a619af722c 390 Pfam PF01551 Peptidase family M23 291 384 5.8E-24 T 12-10-2018 IPR016047 Peptidase M23 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 271 7.5E-48 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 Gene3D G3DSA:2.170.230.10 154 230 1.2E-74 T 12-10-2018 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.5E-6 T 12-10-2018 IPR019533 Peptidase S26 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 Gene3D G3DSA:2.10.109.10 77 271 1.2E-74 T 12-10-2018 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 Pfam PF00717 Peptidase S24-like 85 160 1.1E-21 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 7.1E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 7.1E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 7.1E-27 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 vfu_A00835 fd4fcced660aba2da9b507d8ea61bf35 298 SUPERFAMILY SSF51306 77 296 6.8E-71 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.9E-45 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 4.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 4.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 4.9E-25 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 81.729 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 SUPERFAMILY SSF53671 4 333 3.93E-97 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 Gene3D G3DSA:3.40.50.1370 152 319 1.5E-143 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 1.6E-131 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.2E-31 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 Gene3D G3DSA:3.40.50.1370 5 329 1.5E-143 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 vfu_A00751 4fbdf342862a2ed4c6deb04077c305a1 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 1.4E-54 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 vfu_B01306 8312f2170ba9e8b0be3a6ca35be032e4 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 1.2E-25 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain vfu_B01306 8312f2170ba9e8b0be3a6ca35be032e4 154 Gene3D G3DSA:3.40.140.10 2 152 4.7E-40 T 12-10-2018 vfu_B01306 8312f2170ba9e8b0be3a6ca35be032e4 154 PIRSF PIRSF006019 1 147 5.0E-44 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 vfu_B01306 8312f2170ba9e8b0be3a6ca35be032e4 154 SUPERFAMILY SSF53927 7 136 1.2E-30 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_B01306 8312f2170ba9e8b0be3a6ca35be032e4 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 vfu_A01262 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 Gene3D G3DSA:3.40.50.300 1 197 3.6E-44 T 12-10-2018 vfu_A01262 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 9.4E-78 T 12-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 vfu_A01262 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 SUPERFAMILY SSF52540 2 194 1.3E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01262 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01262 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 Pfam PF00005 ABC transporter 19 158 4.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01262 50cd86a7ebf3faa8cd2ca085ba4a62c5 206 SMART SM00382 26 205 1.7E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02276 b5ce29926a0a9d40e6037e1405878b16 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 4.8E-19 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 PIRSF PIRSF001430 1 253 1.2E-77 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.313 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 SUPERFAMILY SSF55120 1 256 8.34E-94 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 Gene3D G3DSA:3.30.70.660 105 242 8.2E-50 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 4.4E-76 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 1.6E-10 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 Pfam PF01416 tRNA pseudouridine synthase 145 244 5.5E-29 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02602 74d4dd3a4bc4a4945e5c81acb0c35626 264 Gene3D G3DSA:3.30.70.580 1 104 3.7E-40 T 12-10-2018 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 1.2E-199 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 Gene3D G3DSA:3.30.360.10 180 488 2.4E-124 T 12-10-2018 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 3.2E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 3.2E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 3.2E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 3.2E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 3.2E-49 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 191 4.3E-63 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 486 3.0E-114 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 PIRSF PIRSF000110 3 489 2.7E-179 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 SUPERFAMILY SSF55347 181 489 1.37E-113 T 12-10-2018 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 Gene3D G3DSA:3.40.50.720 4 179 2.0E-59 T 12-10-2018 vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 SUPERFAMILY SSF51735 4 194 4.92E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00575 4d1fb1f51190fc69b26d36eacdd4e6a4 500 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 487 86.525 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 vfu_A01939 52835f36d969394d4e94b623a2c13258 575 SUPERFAMILY SSF90123 3 322 4.58E-54 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A01939 52835f36d969394d4e94b623a2c13258 575 Pfam PF00664 ABC transporter transmembrane region 7 289 4.5E-31 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_A01939 52835f36d969394d4e94b623a2c13258 575 Gene3D G3DSA:1.20.1560.10 1 323 5.1E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A01939 52835f36d969394d4e94b623a2c13258 575 SMART SM00382 362 549 3.2E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01939 52835f36d969394d4e94b623a2c13258 575 Gene3D G3DSA:3.40.50.300 330 575 8.5E-82 T 12-10-2018 vfu_A01939 52835f36d969394d4e94b623a2c13258 575 Pfam PF00005 ABC transporter 353 501 1.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01939 52835f36d969394d4e94b623a2c13258 575 SUPERFAMILY SSF52540 333 569 2.07E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01939 52835f36d969394d4e94b623a2c13258 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 Gene3D G3DSA:3.40.50.80 103 237 6.6E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 Pfam PF00970 Oxidoreductase FAD-binding domain 18 99 2.3E-5 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 Gene3D G3DSA:2.40.30.10 1 102 1.3E-23 T 12-10-2018 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 SUPERFAMILY SSF63380 2 101 3.56E-18 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 2.0E-22 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 SUPERFAMILY SSF52343 104 235 9.95E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.0E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.0E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.0E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 1.0E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_A00054 4637c69cde77629c94028e48ff6267f9 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 1.0E-12 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 vfu_A00064 a0e2392f764faec847f03832246c3783 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 112 2.1E-11 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A00064 a0e2392f764faec847f03832246c3783 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 7.0E-38 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding vfu_A00064 a0e2392f764faec847f03832246c3783 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 431 9.4E-41 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 vfu_A00064 a0e2392f764faec847f03832246c3783 607 SUPERFAMILY SSF51206 8 129 1.96E-17 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A00064 a0e2392f764faec847f03832246c3783 607 SMART SM00100 11 128 1.1E-4 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A00064 a0e2392f764faec847f03832246c3783 607 Gene3D G3DSA:2.60.120.10 5 138 1.4E-12 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A00064 a0e2392f764faec847f03832246c3783 607 Gene3D G3DSA:3.10.580.10 143 287 5.3E-17 T 12-10-2018 vfu_A00064 a0e2392f764faec847f03832246c3783 607 SUPERFAMILY SSF54631 146 275 4.76E-16 T 12-10-2018 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 SUPERFAMILY SSF58104 240 548 1.14E-75 T 12-10-2018 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Gene3D G3DSA:1.10.287.950 218 549 1.7E-69 T 12-10-2018 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 346 515 4.0E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 187 2.9E-18 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 3.8E-10 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 3.8E-10 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 461 490 3.8E-10 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02283 2fa6d87c6d6fcbfbdefedbb6131e056a 549 SMART SM00283 286 547 6.9E-92 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 SUPERFAMILY SSF51064 145 200 3.01E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 Gene3D G3DSA:2.30.22.10 144 200 1.9E-25 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.199 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 Gene3D G3DSA:3.90.20.20 37 143 8.2E-32 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 SUPERFAMILY SSF58014 46 144 5.1E-29 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 Pfam PF01025 GrpE 40 200 1.5E-54 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 69 85 7.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 97 112 7.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 152 167 7.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02730 d0f13c60ef930070bf15701c869f0ad1 200 PRINTS PR00773 GrpE protein signature 179 198 7.4E-29 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.50.40.10 197 394 1.4E-82 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF01588 Putative tRNA binding domain 45 145 3.0E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 5.7E-281 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SMART SM00896 701 794 1.8E-44 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 7.1E-29 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 47.192 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SMART SM00873 212 385 4.6E-100 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.56.10 403 475 5.8E-26 T 12-10-2018 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.56.10 7 179 1.0E-69 T 12-10-2018 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:2.40.50.140 39 154 1.0E-69 T 12-10-2018 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF50249 38 196 3.67E-47 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SMART SM00874 403 471 1.7E-29 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF56037 195 394 1.57E-77 T 12-10-2018 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF55681 467 689 2.39E-54 T 12-10-2018 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF46955 403 475 8.97E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.8E-18 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Pfam PF03483 B3/4 domain 212 385 2.3E-72 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.930.10 486 691 3.0E-64 T 12-10-2018 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 Gene3D G3DSA:3.30.70.380 702 795 1.5E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 vfu_A02136 8b7aee9e2fe7b0f766ad066dc49d914b 795 SUPERFAMILY SSF54991 697 794 2.22E-29 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Pfam PF00171 Aldehyde dehydrogenase family 5 400 1.9E-24 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 SUPERFAMILY SSF56796 452 863 1.16E-114 T 12-10-2018 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 PIRSF PIRSF000111 1 865 0.0 T 12-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 SUPERFAMILY SSF53720 6 454 2.62E-82 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.605.10 15 216 1.6E-167 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:1.20.1090.10 643 864 1.8E-59 T 12-10-2018 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.605.10 401 455 5.4E-7 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.309.10 217 400 1.6E-167 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Gene3D G3DSA:3.40.50.1970 456 642 7.0E-59 T 12-10-2018 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_A01296 3792663ddaec2b5bb9c0ac1a7865d659 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 3.3E-112 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 Gene3D G3DSA:1.20.140.160 104 256 3.7E-15 T 12-10-2018 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 50 63 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 225 251 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 PRINTS PR00046 Major sigma-70 factor signature 225 240 1.0E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 PRINTS PR00046 Major sigma-70 factor signature 50 63 1.0E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 PRINTS PR00046 Major sigma-70 factor signature 206 218 1.0E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 PRINTS PR00046 Major sigma-70 factor signature 240 251 1.0E-18 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 254 3.4E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 257 49.391 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 1 255 4.2E-120 T 12-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 Pfam PF04542 Sigma-70 region 2 26 95 5.3E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 Pfam PF04545 Sigma-70, region 4 202 252 1.6E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 SUPERFAMILY SSF88659 171 255 8.6E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 SUPERFAMILY SSF88946 1 95 4.32E-35 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A00470 dbb7c1c3856c1d17bda38804019410f8 258 Gene3D G3DSA:1.20.120.1810 1 95 2.1E-26 T 12-10-2018 vfu_A02797 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 Pfam PF00571 CBS domain 4 58 4.6E-13 T 12-10-2018 IPR000644 CBS domain vfu_A02797 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 Pfam PF00571 CBS domain 79 128 1.9E-9 T 12-10-2018 IPR000644 CBS domain vfu_A02797 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 SMART SM00116 11 59 1.1E-7 T 12-10-2018 IPR000644 CBS domain vfu_A02797 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 SMART SM00116 84 131 9.2E-7 T 12-10-2018 IPR000644 CBS domain vfu_A02797 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 Gene3D G3DSA:3.10.580.10 1 155 8.7E-53 T 12-10-2018 vfu_A02797 7f1fbd79ac6d0139cb42b5b3b3d2e848 156 SUPERFAMILY SSF54631 1 133 6.19E-33 T 12-10-2018 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 Gene3D G3DSA:3.30.420.40 129 293 1.4E-130 T 12-10-2018 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 1.6E-123 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 SUPERFAMILY SSF53067 101 309 2.16E-44 T 12-10-2018 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 63.132 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 4.9E-134 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 Gene3D G3DSA:3.30.420.40 3 315 1.4E-130 T 12-10-2018 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-50 T 12-10-2018 IPR017861 Kae1/TsaD family vfu_A02995 54359ac74712fe8299271cc7228658ae 339 Pfam PF00814 Glycoprotease family 24 307 3.4E-102 T 12-10-2018 IPR000905 Gcp-like domain vfu_A02995 54359ac74712fe8299271cc7228658ae 339 SUPERFAMILY SSF53067 3 123 9.06E-31 T 12-10-2018 vfu_A02995 54359ac74712fe8299271cc7228658ae 339 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 Gene3D G3DSA:3.40.50.720 109 297 1.4E-111 T 12-10-2018 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 Gene3D G3DSA:3.40.50.720 14 312 1.4E-111 T 12-10-2018 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 SUPERFAMILY SSF52283 7 136 3.4E-49 T 12-10-2018 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.6E-54 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 Gene3D G3DSA:3.30.70.260 328 408 3.0E-33 T 12-10-2018 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 SUPERFAMILY SSF55021 335 408 1.37E-17 T 12-10-2018 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 2.2E-38 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 vfu_A00816 14550d2676e1412eb947b37c7b5a2414 409 SUPERFAMILY SSF51735 108 295 7.81E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02330 75c86caa215997304e4622188fd8cf6d 157 Gene3D G3DSA:3.40.35.10 1 155 1.2E-54 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 vfu_A02330 75c86caa215997304e4622188fd8cf6d 157 SUPERFAMILY SSF52728 3 156 7.85E-51 T 12-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 vfu_A02330 75c86caa215997304e4622188fd8cf6d 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 2.4E-50 T 12-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 vfu_A02330 75c86caa215997304e4622188fd8cf6d 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 1.8E-66 T 12-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 vfu_A02556 9d782dc9b791a10984c79c9b5b1e6c68 420 SUPERFAMILY SSF56935 26 420 2.43E-83 T 12-10-2018 vfu_A02556 9d782dc9b791a10984c79c9b5b1e6c68 420 Gene3D G3DSA:2.40.160.60 26 420 1.1E-108 T 12-10-2018 vfu_A02556 9d782dc9b791a10984c79c9b5b1e6c68 420 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 420 7.0E-116 T 12-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) vfu_A01494 bc2a4d30b580f223a063e78e9659b3bb 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 256 2.4E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01494 bc2a4d30b580f223a063e78e9659b3bb 262 Gene3D G3DSA:1.10.3720.10 58 260 5.8E-18 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01494 bc2a4d30b580f223a063e78e9659b3bb 262 SUPERFAMILY SSF161098 64 252 2.75E-19 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 Gene3D G3DSA:3.30.450.20 118 240 9.0E-18 T 12-10-2018 vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 395 2.1E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 Gene3D G3DSA:3.30.70.270 241 401 9.6E-47 T 12-10-2018 vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 122 235 5.5E-8 T 12-10-2018 IPR000014 PAS domain vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 SUPERFAMILY SSF55785 6 110 3.84E-7 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 Gene3D G3DSA:3.30.450.20 4 111 4.4E-7 T 12-10-2018 vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 SMART SM00091 3 68 0.097 T 12-10-2018 IPR000014 PAS domain vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 SMART SM00091 121 187 5.8E-4 T 12-10-2018 IPR000014 PAS domain vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 Pfam PF13188 PAS domain 9 38 2.8E-4 T 12-10-2018 IPR000014 PAS domain vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 SUPERFAMILY SSF55785 122 228 2.44E-11 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 Pfam PF08448 PAS fold 127 231 2.7E-11 T 12-10-2018 IPR013656 PAS fold-4 vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 398 3.1E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 SUPERFAMILY SSF55073 246 399 1.41E-39 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01206 89b0ef941e1790bb8d74aa37c8d5a9a3 401 SMART SM00267 230 401 5.5E-48 T 12-10-2018 IPR000160 GGDEF domain vfu_A02364 24c865e03229e228fff24c646b229add 705 SUPERFAMILY SSF58104 396 705 1.01E-72 T 12-10-2018 vfu_A02364 24c865e03229e228fff24c646b229add 705 SMART SM00304 374 428 4.7E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02364 24c865e03229e228fff24c646b229add 705 Pfam PF00672 HAMP domain 375 424 1.2E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02364 24c865e03229e228fff24c646b229add 705 Pfam PF02743 Cache domain 48 324 8.2E-18 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A02364 24c865e03229e228fff24c646b229add 705 Gene3D G3DSA:1.10.287.950 373 705 3.9E-69 T 12-10-2018 vfu_A02364 24c865e03229e228fff24c646b229add 705 SMART SM00283 443 704 3.8E-65 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02364 24c865e03229e228fff24c646b229add 705 Gene3D G3DSA:3.30.450.20 234 334 2.8E-27 T 12-10-2018 vfu_A02364 24c865e03229e228fff24c646b229add 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 507 671 4.0E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02364 24c865e03229e228fff24c646b229add 705 Gene3D G3DSA:3.30.450.20 98 233 2.8E-27 T 12-10-2018 vfu_A03151 70fcbc7990c35b55a16234a770a115d8 64 Gene3D G3DSA:2.40.50.140 1 64 2.3E-15 T 12-10-2018 vfu_A03151 70fcbc7990c35b55a16234a770a115d8 64 SUPERFAMILY SSF50249 2 62 1.09E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A03151 70fcbc7990c35b55a16234a770a115d8 64 PIRSF PIRSF003135 1 64 5.2E-25 T 12-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 vfu_A00314 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 SMART SM00062 24 245 4.3E-70 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A00314 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 Gene3D G3DSA:3.40.190.10 91 204 1.9E-28 T 12-10-2018 vfu_A00314 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 SMART SM00079 24 244 0.0078 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 vfu_A00314 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 SUPERFAMILY SSF53850 1 246 1.2E-57 T 12-10-2018 vfu_A00314 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 3.3E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A00314 3f16b2eec7c48fe377f6e4e5e8e52e2c 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site vfu_A00893 1f3e40599775819a7e703a513e800187 296 Gene3D G3DSA:3.40.50.620 3 282 3.6E-107 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00893 1f3e40599775819a7e703a513e800187 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 268 8.1E-112 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 vfu_A00893 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.8E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.8E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.8E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 8.8E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 8.8E-14 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 SUPERFAMILY SSF52374 3 281 1.16E-84 T 12-10-2018 vfu_A00893 1f3e40599775819a7e703a513e800187 296 Gene3D G3DSA:3.40.50.620 78 216 3.6E-107 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00893 1f3e40599775819a7e703a513e800187 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 107 1.1E-25 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 124 235 1.5E-15 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 vfu_A00893 1f3e40599775819a7e703a513e800187 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 39.718 T 12-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 SUPERFAMILY SSF51215 6 162 6.54E-31 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_A00406 54a8deb069721df7d67778b3766551e4 279 Gene3D G3DSA:1.10.10.2730 230 276 3.8E-16 T 12-10-2018 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 SUPERFAMILY SSF46689 175 225 7.7E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 Gene3D G3DSA:2.60.120.280 5 168 6.1E-58 T 12-10-2018 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 SMART SM00342 192 275 3.3E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 5.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 5.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 Gene3D G3DSA:1.10.10.60 175 229 5.4E-11 T 12-10-2018 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 SUPERFAMILY SSF46689 229 278 1.3E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 Pfam PF12833 Helix-turn-helix domain 198 276 7.7E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00406 54a8deb069721df7d67778b3766551e4 279 Pfam PF02311 AraC-like ligand binding domain 36 155 1.7E-20 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 SUPERFAMILY SSF51905 9 371 1.5E-39 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 Gene3D G3DSA:3.50.50.60 10 366 2.6E-76 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 Gene3D G3DSA:3.30.9.10 86 318 2.6E-76 T 12-10-2018 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 Pfam PF01266 FAD dependent oxidoreductase 10 359 1.2E-48 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 483 1.5E-10 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 SUPERFAMILY SSF54373 226 317 4.84E-12 T 12-10-2018 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 4.4E-21 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 4.4E-21 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 4.4E-21 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.4E-21 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 4.4E-21 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 Gene3D G3DSA:1.10.10.1100 418 489 8.2E-20 T 12-10-2018 vfu_B00413 4ae748bd57b527e9cd2c5f4307b47442 556 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 537 1.2E-262 T 12-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 vfu_A01970 655bd7518e5dcb5cd20375569a3d05ec 451 SUPERFAMILY SSF103473 7 435 2.88E-64 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01970 655bd7518e5dcb5cd20375569a3d05ec 451 Pfam PF00083 Sugar (and other) transporter 25 232 2.1E-17 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 vfu_A01970 655bd7518e5dcb5cd20375569a3d05ec 451 Pfam PF07690 Major Facilitator Superfamily 260 434 1.3E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01970 655bd7518e5dcb5cd20375569a3d05ec 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 vfu_A01970 655bd7518e5dcb5cd20375569a3d05ec 451 Gene3D G3DSA:1.20.1250.20 18 447 2.1E-61 T 12-10-2018 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 Pfam PF00072 Response regulator receiver domain 1 111 8.4E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 SUPERFAMILY SSF46894 122 198 1.9E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 SMART SM00421 139 196 1.1E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 SMART SM00448 1 111 5.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 2.1E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 SUPERFAMILY SSF52172 1 127 8.25E-32 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.1E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 Gene3D G3DSA:3.40.50.12740 1 200 7.0E-62 T 12-10-2018 vfu_B00308 ecd8cf78a58d0ce47b92ebb5d867a222 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01649 76f5335bad8e037b557790cbd1a6c1f7 227 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 3 215 1.1E-28 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01649 76f5335bad8e037b557790cbd1a6c1f7 227 SMART SM00062 7 219 0.0032 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01649 76f5335bad8e037b557790cbd1a6c1f7 227 SUPERFAMILY SSF53850 3 215 4.01E-42 T 12-10-2018 vfu_A01649 76f5335bad8e037b557790cbd1a6c1f7 227 Gene3D G3DSA:3.40.190.10 2 215 6.8E-34 T 12-10-2018 vfu_A01649 76f5335bad8e037b557790cbd1a6c1f7 227 Gene3D G3DSA:3.40.190.10 79 174 6.8E-34 T 12-10-2018 vfu_A00112 99e7dc91e83c847a4b8dbdf148b65dbd 359 Gene3D G3DSA:3.40.50.720 2 325 4.7E-131 T 12-10-2018 vfu_A00112 99e7dc91e83c847a4b8dbdf148b65dbd 359 Gene3D G3DSA:3.90.25.10 201 333 4.7E-131 T 12-10-2018 vfu_A00112 99e7dc91e83c847a4b8dbdf148b65dbd 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 5.3E-94 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A00112 99e7dc91e83c847a4b8dbdf148b65dbd 359 SUPERFAMILY SSF51735 1 337 2.5E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00112 99e7dc91e83c847a4b8dbdf148b65dbd 359 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 4.4E-153 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 SUPERFAMILY SSF82649 248 336 1.99E-23 T 12-10-2018 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 Gene3D G3DSA:3.30.390.50 250 338 2.2E-26 T 12-10-2018 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 56 157 2.1E-7 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 Gene3D G3DSA:3.30.930.10 3 249 1.3E-80 T 12-10-2018 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 56.303 T 12-10-2018 IPR023741 Lipoate-protein ligase A GO:0009249|GO:0016979 KEGG: 00785+6.3.1.20 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 249 316 1.9E-17 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 SUPERFAMILY SSF55681 3 247 1.08E-71 T 12-10-2018 vfu_B00897 efda2ce8f41496315f6131e1ee1ae5a7 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 324 4.9E-107 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 vfu_A00256 0cbbbdf792763c869846a683ca456e5d 168 Gene3D G3DSA:1.10.1040.10 3 168 3.4E-69 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_A00256 0cbbbdf792763c869846a683ca456e5d 168 SUPERFAMILY SSF48179 108 167 7.14E-17 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00256 0cbbbdf792763c869846a683ca456e5d 168 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 115 166 2.5E-7 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 vfu_A00256 0cbbbdf792763c869846a683ca456e5d 168 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 20 101 1.0E-10 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 vfu_A00256 0cbbbdf792763c869846a683ca456e5d 168 SUPERFAMILY SSF48179 8 101 1.87E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A01520 d45439e3d687b4636016ece0ca29d920 512 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 143 159 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 vfu_A01520 d45439e3d687b4636016ece0ca29d920 512 Gene3D G3DSA:1.10.275.10 1 201 2.7E-56 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A01520 d45439e3d687b4636016ece0ca29d920 512 Pfam PF00221 Aromatic amino acid lyase 14 480 3.9E-163 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 vfu_A01520 d45439e3d687b4636016ece0ca29d920 512 Gene3D G3DSA:1.20.200.10 202 508 4.8E-102 T 12-10-2018 vfu_A01520 d45439e3d687b4636016ece0ca29d920 512 SUPERFAMILY SSF48557 4 510 2.75E-173 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_B01163 5cd28af7bced83491b7503c549dcf0a9 206 Gene3D G3DSA:1.20.1050.10 84 198 2.5E-33 T 12-10-2018 vfu_B01163 5cd28af7bced83491b7503c549dcf0a9 206 Gene3D G3DSA:3.40.30.10 1 83 1.5E-33 T 12-10-2018 vfu_B01163 5cd28af7bced83491b7503c549dcf0a9 206 Pfam PF00043 Glutathione S-transferase, C-terminal domain 126 192 2.5E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal vfu_B01163 5cd28af7bced83491b7503c549dcf0a9 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 1.7E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_B01163 5cd28af7bced83491b7503c549dcf0a9 206 SUPERFAMILY SSF47616 82 200 5.71E-21 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_B01163 5cd28af7bced83491b7503c549dcf0a9 206 SUPERFAMILY SSF52833 1 77 5.61E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 SMART SM00662 23 235 5.5E-104 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF56553 53 179 4.19E-41 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 12-10-2018 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 SUPERFAMILY SSF55257 7 234 9.81E-30 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 4.8E-112 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:2.170.120.12 53 178 1.0E-83 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 12-10-2018 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 1.1E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Gene3D G3DSA:3.30.1360.10 17 229 1.0E-83 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.5E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00691 1c374090fd0fe0a71f780c050d9e8fb6 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.962 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 vfu_A00943 ba98a08168f00500e52669780103d65f 77 SMART SM01387 9 76 4.8E-26 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00943 ba98a08168f00500e52669780103d65f 77 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 17 76 1.0E-26 T 12-10-2018 vfu_A00943 ba98a08168f00500e52669780103d65f 77 ProSitePatterns PS00362 Ribosomal protein S15 signature. 27 57 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00943 ba98a08168f00500e52669780103d65f 77 Gene3D G3DSA:1.10.287.10 12 77 1.1E-23 T 12-10-2018 vfu_A00943 ba98a08168f00500e52669780103d65f 77 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 16 77 1.2E-26 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00943 ba98a08168f00500e52669780103d65f 77 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 77 15.955 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00943 ba98a08168f00500e52669780103d65f 77 SUPERFAMILY SSF47060 15 77 8.24E-24 T 12-10-2018 IPR009068 S15/NS1, RNA-binding vfu_A00943 ba98a08168f00500e52669780103d65f 77 Pfam PF00312 Ribosomal protein S15 16 76 1.9E-25 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01841 707292271641cd8153d8ed110531606d 280 Gene3D G3DSA:1.10.3720.10 2 273 2.1E-47 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01841 707292271641cd8153d8ed110531606d 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 275 8.3E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01841 707292271641cd8153d8ed110531606d 280 SUPERFAMILY SSF161098 8 277 8.5E-51 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 Gene3D G3DSA:3.30.1510.10 129 264 1.4E-190 T 12-10-2018 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 Pfam PF01268 Formate--tetrahydrofolate ligase 4 581 1.3E-237 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 Gene3D G3DSA:3.40.50.300 4 454 1.4E-190 T 12-10-2018 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 Gene3D G3DSA:3.10.410.10 470 558 7.0E-29 T 12-10-2018 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 345 356 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 582 42.436 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 vfu_B00107 e2c56194dbae465a812a1a1e8a2d6a6b 582 SUPERFAMILY SSF52540 4 580 6.83E-217 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00714 6b1ce68976f2015bfe9e99350042f15f 340 Pfam PF07755 Domain of unknown function (DUF1611_C) P-loop domain 142 331 8.0E-69 T 12-10-2018 IPR035086 Domain of unknown function DUF1611, P-loop vfu_B00714 6b1ce68976f2015bfe9e99350042f15f 340 SUPERFAMILY SSF52540 4 336 2.76E-103 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00714 6b1ce68976f2015bfe9e99350042f15f 340 Gene3D G3DSA:3.40.50.300 131 336 2.4E-72 T 12-10-2018 vfu_B00714 6b1ce68976f2015bfe9e99350042f15f 340 Gene3D G3DSA:3.40.50.720 52 130 5.1E-24 T 12-10-2018 vfu_B00714 6b1ce68976f2015bfe9e99350042f15f 340 Pfam PF17396 Domain of unknown function (DUF1611_N) Rossmann-like domain 43 128 9.1E-25 T 12-10-2018 IPR035402 Domain of unknown function DUF1611-N, Rossmann-like domain vfu_B00714 6b1ce68976f2015bfe9e99350042f15f 340 PIRSF PIRSF026760 6 339 1.0E-91 T 12-10-2018 IPR011669 Uncharacterised conserved protein UCP026760 vfu_A00922 0cc649e88538681e8810043f9203e50e 366 Gene3D G3DSA:2.40.30.170 70 290 4.1E-52 T 12-10-2018 vfu_A00922 0cc649e88538681e8810043f9203e50e 366 SUPERFAMILY SSF111369 71 285 3.66E-30 T 12-10-2018 vfu_A00922 0cc649e88538681e8810043f9203e50e 366 Gene3D G3DSA:2.40.50.100 81 209 4.1E-52 T 12-10-2018 vfu_A00922 0cc649e88538681e8810043f9203e50e 366 Gene3D G3DSA:1.10.287.470 116 175 4.1E-52 T 12-10-2018 vfu_A00922 0cc649e88538681e8810043f9203e50e 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 276 2.1E-20 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A00922 0cc649e88538681e8810043f9203e50e 366 Gene3D G3DSA:2.40.420.20 291 357 4.1E-52 T 12-10-2018 vfu_A00922 0cc649e88538681e8810043f9203e50e 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 357 3.6E-48 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A02459 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Pfam PF13343 Bacterial extracellular solute-binding protein 89 291 3.4E-30 T 12-10-2018 vfu_A02459 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Gene3D G3DSA:3.40.190.10 134 321 1.5E-116 T 12-10-2018 vfu_A02459 ab2585d493bb67e5af3e0ce7ae2d61dd 344 Gene3D G3DSA:3.40.190.10 32 307 1.5E-116 T 12-10-2018 vfu_A02459 ab2585d493bb67e5af3e0ce7ae2d61dd 344 SUPERFAMILY SSF53850 25 333 1.48E-67 T 12-10-2018 vfu_A02459 ab2585d493bb67e5af3e0ce7ae2d61dd 344 PIRSF PIRSF002825 3 341 1.1E-66 T 12-10-2018 IPR026045 Ferric binding protein vfu_B00299 f67f46b1603414868f7aba8aa2c54600 209 SUPERFAMILY SSF103088 85 203 2.35E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B00299 f67f46b1603414868f7aba8aa2c54600 209 Pfam PF00691 OmpA family 104 198 2.6E-17 T 12-10-2018 IPR006665 OmpA-like domain vfu_B00299 f67f46b1603414868f7aba8aa2c54600 209 PRINTS PR01021 OMPA domain signature 104 126 5.8E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00299 f67f46b1603414868f7aba8aa2c54600 209 PRINTS PR01021 OMPA domain signature 134 149 5.8E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00299 f67f46b1603414868f7aba8aa2c54600 209 PRINTS PR01021 OMPA domain signature 149 165 5.8E-9 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00299 f67f46b1603414868f7aba8aa2c54600 209 Gene3D G3DSA:3.30.1330.60 71 208 6.5E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 PIRSF PIRSF000371 1 47 7.9E-11 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 PIRSF PIRSF000371 44 245 5.2E-45 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 SUPERFAMILY SSF102114 23 220 5.69E-28 T 12-10-2018 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 Gene3D G3DSA:3.20.20.70 2 246 9.5E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 7.4E-109 T 12-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 Pfam PF04055 Radical SAM superfamily 24 180 1.0E-30 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02377 ae6dd1980db1cb280da5ab9d5b12aa26 246 Pfam PF13353 4Fe-4S single cluster domain 16 137 5.8E-20 T 12-10-2018 vfu_A02278 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 737 904 1.64E-13 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02278 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 21 247 4.71E-42 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02278 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 505 713 6.8E-13 T 12-10-2018 vfu_A02278 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 264 447 1.92E-6 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02278 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 725 911 3.7E-15 T 12-10-2018 vfu_A02278 553d3606862329c55072d2a53d780a27 917 Pfam PF00675 Insulinase (Peptidase family M16) 49 168 1.2E-25 T 12-10-2018 IPR011765 Peptidase M16, N-terminal vfu_A02278 553d3606862329c55072d2a53d780a27 917 Pfam PF05193 Peptidase M16 inactive domain 668 841 2.5E-10 T 12-10-2018 IPR007863 Peptidase M16, C-terminal vfu_A02278 553d3606862329c55072d2a53d780a27 917 Pfam PF05193 Peptidase M16 inactive domain 197 371 1.0E-16 T 12-10-2018 IPR007863 Peptidase M16, C-terminal vfu_A02278 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 256 466 2.2E-8 T 12-10-2018 vfu_A02278 553d3606862329c55072d2a53d780a27 917 SUPERFAMILY SSF63411 496 711 1.75E-22 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02278 553d3606862329c55072d2a53d780a27 917 Gene3D G3DSA:3.30.830.10 8 246 6.4E-57 T 12-10-2018 vfu_A02278 553d3606862329c55072d2a53d780a27 917 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 62 85 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.863 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Gene3D G3DSA:3.30.930.10 66 270 1.3E-64 T 12-10-2018 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 5.7E-69 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Pfam PF02237 Biotin protein ligase C terminal domain 272 317 4.9E-10 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 SUPERFAMILY SSF55681 70 268 1.99E-59 T 12-10-2018 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Pfam PF08279 HTH domain 9 59 6.9E-9 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 SUPERFAMILY SSF50037 271 317 9.61E-11 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 SUPERFAMILY SSF46785 6 60 7.49E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Gene3D G3DSA:1.10.10.10 1 64 1.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Gene3D G3DSA:2.30.30.100 271 313 3.7E-19 T 12-10-2018 vfu_A00047 1017e375fe24fbdfffd5367a8395796e 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 4.3E-21 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 vfu_A00974 caedd01e8b96bdbe0409882481d2a41d 356 Pfam PF02690 Na+/Pi-cotransporter 192 299 2.0E-19 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 vfu_A00974 caedd01e8b96bdbe0409882481d2a41d 356 Pfam PF02690 Na+/Pi-cotransporter 4 126 3.0E-20 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 vfu_B01281 eae33481e56bb904da65a69f533eefb0 153 Gene3D G3DSA:1.10.357.10 1 153 1.9E-61 T 12-10-2018 vfu_B01281 eae33481e56bb904da65a69f533eefb0 153 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 1.1E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01281 eae33481e56bb904da65a69f533eefb0 153 SUPERFAMILY SSF46689 1 74 1.54E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02110 00483e4d07ffcdc7caebe3acb1258571 267 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 15 247 7.2E-33 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 vfu_A02110 00483e4d07ffcdc7caebe3acb1258571 267 Pfam PF02654 Cobalamin-5-phosphate synthase 15 248 2.0E-50 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 vfu_A02110 00483e4d07ffcdc7caebe3acb1258571 267 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 267 47.059 T 12-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 vfu_B01171 838a15dad84606959b653c9191af92d1 147 Gene3D G3DSA:3.30.70.920 55 137 2.1E-20 T 12-10-2018 vfu_B01171 838a15dad84606959b653c9191af92d1 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.2E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B01171 838a15dad84606959b653c9191af92d1 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.2E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B01171 838a15dad84606959b653c9191af92d1 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.2E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B01171 838a15dad84606959b653c9191af92d1 147 SUPERFAMILY SSF54909 63 146 3.89E-16 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B01171 838a15dad84606959b653c9191af92d1 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 7.0E-17 T 12-10-2018 vfu_B01171 838a15dad84606959b653c9191af92d1 147 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 2.8E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_B01171 838a15dad84606959b653c9191af92d1 147 Gene3D G3DSA:1.10.10.10 1 54 2.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01171 838a15dad84606959b653c9191af92d1 147 SMART SM00344 1 110 3.0E-33 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B01171 838a15dad84606959b653c9191af92d1 147 SUPERFAMILY SSF46785 1 59 3.26E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00512 75f57412fdc74f2581b90cfa4c4f47ae 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 272 2.8E-63 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 vfu_B00512 75f57412fdc74f2581b90cfa4c4f47ae 276 Gene3D G3DSA:3.40.50.620 1 276 4.9E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B00512 75f57412fdc74f2581b90cfa4c4f47ae 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 274 44.998 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 vfu_B00512 75f57412fdc74f2581b90cfa4c4f47ae 276 SUPERFAMILY SSF52402 2 276 6.9E-79 T 12-10-2018 vfu_B00512 75f57412fdc74f2581b90cfa4c4f47ae 276 Pfam PF02540 NAD synthase 21 270 8.3E-62 T 12-10-2018 IPR022310 NAD/GMP synthase vfu_B01358 52196f519a6a73ad35d69213c5140776 333 SUPERFAMILY SSF56931 70 332 1.7E-90 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 PRINTS PR01486 Bacterial phospholipase A1 protein signature 115 132 3.0E-27 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 PRINTS PR01486 Bacterial phospholipase A1 protein signature 280 297 3.0E-27 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 PRINTS PR01486 Bacterial phospholipase A1 protein signature 302 322 3.0E-27 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 PRINTS PR01486 Bacterial phospholipase A1 protein signature 161 180 3.0E-27 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 PRINTS PR01486 Bacterial phospholipase A1 protein signature 247 265 3.0E-27 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 Gene3D G3DSA:2.40.230.10 68 333 2.8E-89 T 12-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_B01358 52196f519a6a73ad35d69213c5140776 333 Pfam PF02253 Phospholipase A1 68 329 3.6E-97 T 12-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 vfu_A01000 dee04b640f019c389c1125a8f72ed86d 172 Pfam PF01931 Protein of unknown function DUF84 4 162 1.4E-57 T 12-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 vfu_A01000 dee04b640f019c389c1125a8f72ed86d 172 SUPERFAMILY SSF52972 1 168 2.49E-60 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A01000 dee04b640f019c389c1125a8f72ed86d 172 Hamap MF_00648 Non-canonical purine NTP phosphatase. 1 168 28.105 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase vfu_A01000 dee04b640f019c389c1125a8f72ed86d 172 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 3 166 6.9E-42 T 12-10-2018 IPR002786 Non-canonical purine NTP phosphatase vfu_A01000 dee04b640f019c389c1125a8f72ed86d 172 Gene3D G3DSA:3.90.950.10 1 171 9.1E-67 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 SUPERFAMILY SSF56935 33 645 7.33E-119 T 12-10-2018 vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 156 2.0E-26 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 Pfam PF00593 TonB dependent receptor 188 643 1.6E-52 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 628 645 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 12-10-2018 IPR010916 TonB box, conserved site vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 Gene3D G3DSA:2.170.130.10 32 161 1.8E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_A03038 bf177cf2a980e3efe559874b4c9a60b2 645 Gene3D G3DSA:2.40.170.20 167 645 5.2E-133 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 PIRSF PIRSF000447 3 416 4.6E-202 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 SUPERFAMILY SSF53901 217 415 8.06E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 6 249 2.9E-64 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 Gene3D G3DSA:3.40.47.10 1 257 6.7E-93 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 157 173 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 6 414 1.5E-191 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 SUPERFAMILY SSF53901 6 254 6.55E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 257 372 3.4E-36 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 Gene3D G3DSA:3.40.47.10 263 416 1.3E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01310 37fb93ce60678a4c25451b50e232834e 416 SMART SM00825 Beta-ketoacyl synthase 8 416 2.3E-15 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain vfu_A02700 47beace18a44cf126b7129874e5c4d20 153 Gene3D G3DSA:3.40.630.30 4 131 1.1E-20 T 12-10-2018 vfu_A02700 47beace18a44cf126b7129874e5c4d20 153 Pfam PF13302 Acetyltransferase (GNAT) domain 12 117 4.3E-15 T 12-10-2018 IPR000182 GNAT domain vfu_A02700 47beace18a44cf126b7129874e5c4d20 153 SUPERFAMILY SSF55729 13 126 1.31E-21 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00523 ad4842ca23c53ec2f4a6576293b6959e 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 3.8E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A00523 ad4842ca23c53ec2f4a6576293b6959e 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 3.8E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A00523 ad4842ca23c53ec2f4a6576293b6959e 182 Gene3D G3DSA:3.90.79.10 7 182 1.0E-48 T 12-10-2018 vfu_A00523 ad4842ca23c53ec2f4a6576293b6959e 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_A00523 ad4842ca23c53ec2f4a6576293b6959e 182 SUPERFAMILY SSF55811 8 180 7.31E-40 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A00523 ad4842ca23c53ec2f4a6576293b6959e 182 Pfam PF00293 NUDIX domain 46 159 1.5E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 5.8E-150 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 SUPERFAMILY SSF53448 4 357 3.99E-69 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 SUPERFAMILY SSF51161 293 402 3.19E-20 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 Pfam PF00483 Nucleotidyl transferase 6 273 5.6E-63 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 48.766 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 Gene3D G3DSA:2.160.10.10 287 403 7.0E-35 T 12-10-2018 vfu_A01616 0c6b997dda6b2212ce950318f282dbe0 405 Gene3D G3DSA:3.90.550.10 2 286 5.7E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00863 8aa3cea6b35192c7c014365c398e7540 195 Gene3D G3DSA:3.40.50.1820 7 195 1.1E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00863 8aa3cea6b35192c7c014365c398e7540 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 3.8E-72 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA vfu_A00863 8aa3cea6b35192c7c014365c398e7540 195 SUPERFAMILY SSF53474 7 194 1.97E-18 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 SMART SM00271 4 62 1.2E-31 T 12-10-2018 IPR001623 DnaJ domain vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 12-10-2018 IPR018253 DnaJ domain, conserved site vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF49493 116 263 7.59E-20 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.962 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF57938 137 213 2.35E-22 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:2.10.230.10 149 214 6.6E-22 T 12-10-2018 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:1.10.287.110 1 115 3.6E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF46565 1 110 6.8E-36 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Pfam PF00684 DnaJ central domain 150 210 6.6E-15 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 3.6E-141 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 12-10-2018 IPR001623 DnaJ domain vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 12-10-2018 IPR001623 DnaJ domain vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 12-10-2018 IPR001623 DnaJ domain vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 12-10-2018 IPR001623 DnaJ domain vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Gene3D G3DSA:2.60.260.20 259 366 4.5E-29 T 12-10-2018 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 SUPERFAMILY SSF49493 262 347 8.37E-23 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Pfam PF00226 DnaJ domain 5 67 4.0E-27 T 12-10-2018 IPR001623 DnaJ domain vfu_A02727 a003bef42458fc23b526a2d6935d8c23 382 Pfam PF01556 DnaJ C terminal domain 124 336 2.7E-46 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal vfu_B01388 3a2ca5c9fd689a8c5758be3dc0b79cb8 239 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 204 7.6E-60 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D vfu_B01388 3a2ca5c9fd689a8c5758be3dc0b79cb8 239 SUPERFAMILY SSF50891 92 221 1.55E-38 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_B01388 3a2ca5c9fd689a8c5758be3dc0b79cb8 239 SUPERFAMILY SSF160467 7 97 3.66E-12 T 12-10-2018 vfu_B01388 3a2ca5c9fd689a8c5758be3dc0b79cb8 239 Gene3D G3DSA:3.30.1360.40 1 87 2.9E-9 T 12-10-2018 vfu_B01388 3a2ca5c9fd689a8c5758be3dc0b79cb8 239 SMART SM00796 5 205 2.5E-69 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D vfu_B01388 3a2ca5c9fd689a8c5758be3dc0b79cb8 239 Gene3D G3DSA:2.40.100.10 91 227 4.7E-47 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_A01778 af339d696d97f00bceb98e65c9cdc3c3 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 414 1.5E-15 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 vfu_A02733 4c4975e68ef0e475d599136d87c29bfb 104 Pfam PF04355 SmpA / OmlA family 20 89 4.3E-26 T 12-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 vfu_A02733 4c4975e68ef0e475d599136d87c29bfb 104 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 95 30.923 T 12-10-2018 IPR026592 Outer membrane protein assembly factor BamE vfu_A02733 4c4975e68ef0e475d599136d87c29bfb 104 Gene3D G3DSA:3.30.1450.10 19 102 2.5E-25 T 12-10-2018 IPR037873 BamE-like vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 Gene3D G3DSA:1.20.1720.10 19 264 5.1E-55 T 12-10-2018 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 SUPERFAMILY SSF103473 13 503 1.03E-72 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 Pfam PF07690 Major Facilitator Superfamily 23 415 1.1E-54 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 Gene3D G3DSA:1.20.1250.20 266 504 1.5E-15 T 12-10-2018 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 493 1.6E-130 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 143 167 2.7E-5 T 12-10-2018 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 113 133 2.7E-5 T 12-10-2018 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 268 293 2.7E-5 T 12-10-2018 vfu_A01821 fe5b942f5106954fd6ce8d82c5c5b33d 505 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 2.7E-5 T 12-10-2018 vfu_A00100 f635ae3da88725fa0036ee62318a318c 338 Gene3D G3DSA:3.40.50.2000 42 330 7.0E-48 T 12-10-2018 vfu_A00100 f635ae3da88725fa0036ee62318a318c 338 Pfam PF00534 Glycosyl transferases group 1 157 314 5.9E-31 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_A00100 f635ae3da88725fa0036ee62318a318c 338 SUPERFAMILY SSF53756 35 335 2.83E-57 T 12-10-2018 vfu_A00100 f635ae3da88725fa0036ee62318a318c 338 Gene3D G3DSA:3.40.50.2000 150 321 7.0E-48 T 12-10-2018 vfu_B01290 9e2d9dd920568faf7ff11b34aae38656 176 SUPERFAMILY SSF50475 12 162 7.11E-33 T 12-10-2018 vfu_B01290 9e2d9dd920568faf7ff11b34aae38656 176 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 105 7.6E-16 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B01290 9e2d9dd920568faf7ff11b34aae38656 176 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 4 171 7.7E-87 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain vfu_B01290 9e2d9dd920568faf7ff11b34aae38656 176 Gene3D G3DSA:2.30.110.10 11 175 6.9E-55 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_B01290 9e2d9dd920568faf7ff11b34aae38656 176 PIRSF PIRSF004633 1 176 6.8E-77 T 12-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain vfu_A01892 4016e017514c2c62f974c08360fb3c16 244 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 238 2.7E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01892 4016e017514c2c62f974c08360fb3c16 244 Gene3D G3DSA:1.10.3720.10 1 244 9.8E-48 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01892 4016e017514c2c62f974c08360fb3c16 244 SUPERFAMILY SSF161098 2 242 3.01E-54 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02387 54c70b2f6a0f941971f633ef1df360ff 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.601 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 vfu_A02387 54c70b2f6a0f941971f633ef1df360ff 335 SUPERFAMILY SSF52540 50 162 3.67E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02387 54c70b2f6a0f941971f633ef1df360ff 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 322 5.9E-112 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 vfu_A02387 54c70b2f6a0f941971f633ef1df360ff 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 325 1.4E-93 T 12-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 vfu_A00437 ef0422d3ec8094da4b006920ce7b0238 38 Pfam PF13627 Prokaryotic lipoprotein-attachment site 6 28 7.9E-11 T 12-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site vfu_B00139 c74960cad27eabb049652fd3437f89e2 519 SUPERFAMILY SSF48452 140 272 2.53E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00139 c74960cad27eabb049652fd3437f89e2 519 SUPERFAMILY SSF52172 8 127 2.34E-12 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00139 c74960cad27eabb049652fd3437f89e2 519 Gene3D G3DSA:1.25.40.10 109 325 6.7E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00139 c74960cad27eabb049652fd3437f89e2 519 Pfam PF00072 Response regulator receiver domain 6 89 4.7E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00139 c74960cad27eabb049652fd3437f89e2 519 Gene3D G3DSA:3.40.50.2300 2 108 1.4E-9 T 12-10-2018 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 627 1.4E-43 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 SMART SM00304 334 386 9.5E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 Gene3D G3DSA:1.10.287.950 334 663 4.1E-72 T 12-10-2018 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 8.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 8.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 8.6E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 SUPERFAMILY SSF58104 354 663 1.31E-73 T 12-10-2018 vfu_A02406 bac2e5e3b59924bbc9ca04282e2b1eae 663 SMART SM00283 401 662 6.4E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02041 79f8e0705386f40c0e771eda9a69838a 121 Pfam PF02635 DsrE/DsrF-like family 6 119 5.3E-18 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein vfu_A02041 79f8e0705386f40c0e771eda9a69838a 121 Gene3D G3DSA:3.40.1260.10 3 120 4.2E-27 T 12-10-2018 IPR027396 DsrEFH-like vfu_A02041 79f8e0705386f40c0e771eda9a69838a 121 SUPERFAMILY SSF75169 5 119 1.11E-25 T 12-10-2018 IPR027396 DsrEFH-like vfu_A00379 0c1cbb1b24a054ba37add4d958b111cc 96 Gene3D G3DSA:3.40.309.10 1 56 1.0E-30 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A00379 0c1cbb1b24a054ba37add4d958b111cc 96 Gene3D G3DSA:3.40.605.10 57 84 1.0E-30 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A00379 0c1cbb1b24a054ba37add4d958b111cc 96 Pfam PF00171 Aldehyde dehydrogenase family 1 84 9.3E-30 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A00379 0c1cbb1b24a054ba37add4d958b111cc 96 SUPERFAMILY SSF53720 1 87 5.5E-28 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 Gene3D G3DSA:1.10.287.130 127 235 2.8E-10 T 12-10-2018 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 Gene3D G3DSA:2.60.120.10 14 126 9.3E-10 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 SUPERFAMILY SSF55874 288 434 1.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 434 6.5E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 Gene3D G3DSA:3.30.565.10 283 432 7.8E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 SMART SM00387 324 435 4.8E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 Gene3D G3DSA:1.10.287.130 265 282 7.8E-30 T 12-10-2018 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 2.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 2.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 2.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 2.0E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 Pfam PF00027 Cyclic nucleotide-binding domain 17 95 2.0E-8 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A01794 6f38dea1c4d99d09d5839b186ad60324 440 SUPERFAMILY SSF51206 14 127 4.58E-13 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A01428 41c652b40d132210046a6de0faf39e0b 178 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 39 175 7.1E-33 T 12-10-2018 IPR005247 YbhB/YbcL vfu_A01428 41c652b40d132210046a6de0faf39e0b 178 SUPERFAMILY SSF49777 22 178 9.94E-47 T 12-10-2018 IPR036610 PEBP-like superfamily vfu_A01428 41c652b40d132210046a6de0faf39e0b 178 Gene3D G3DSA:3.90.280.10 9 178 4.7E-49 T 12-10-2018 IPR036610 PEBP-like superfamily vfu_A01428 41c652b40d132210046a6de0faf39e0b 178 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 175 3.0E-34 T 12-10-2018 IPR008914 Phosphatidylethanolamine-binding protein vfu_A02796 4e5ad62b15762e3a418d8141ec254dd3 352 Gene3D G3DSA:3.40.1780.10 14 345 5.7E-119 T 12-10-2018 vfu_A02796 4e5ad62b15762e3a418d8141ec254dd3 352 Gene3D G3DSA:2.40.10.240 64 163 5.7E-119 T 12-10-2018 vfu_A02796 4e5ad62b15762e3a418d8141ec254dd3 352 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 47.388 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 vfu_A02796 4e5ad62b15762e3a418d8141ec254dd3 352 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 5.2E-161 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 vfu_A02796 4e5ad62b15762e3a418d8141ec254dd3 352 Pfam PF02547 Queuosine biosynthesis protein 3 345 3.5E-134 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 vfu_A02796 4e5ad62b15762e3a418d8141ec254dd3 352 SUPERFAMILY SSF111337 1 345 5.49E-141 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 vfu_A02746 89d1c8a7e8a680b738ea757846d2c129 318 Gene3D G3DSA:1.20.1530.20 1 306 4.4E-101 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A02746 89d1c8a7e8a680b738ea757846d2c129 318 Pfam PF01758 Sodium Bile acid symporter family 36 213 2.0E-36 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SUPERFAMILY SSF58104 472 753 2.22E-75 T 12-10-2018 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SMART SM00304 452 504 1.4E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SMART SM00304 505 557 35.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SUPERFAMILY SSF55785 152 198 1.67E-5 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Gene3D G3DSA:3.30.450.20 288 407 1.3E-32 T 12-10-2018 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Gene3D G3DSA:3.30.450.20 160 283 3.7E-35 T 12-10-2018 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Gene3D G3DSA:3.30.450.20 33 155 1.9E-32 T 12-10-2018 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Gene3D G3DSA:1.10.287.950 451 753 4.1E-90 T 12-10-2018 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SMART SM00091 164 227 0.34 T 12-10-2018 IPR000014 PAS domain vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SMART SM00091 37 100 1.6 T 12-10-2018 IPR000014 PAS domain vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SMART SM00091 291 360 12.0 T 12-10-2018 IPR000014 PAS domain vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Pfam PF13188 PAS domain 40 92 0.013 T 12-10-2018 IPR000014 PAS domain vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Pfam PF13188 PAS domain 164 216 0.0036 T 12-10-2018 IPR000014 PAS domain vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 565 720 4.7E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00980 201bc2cf5032b3a99756a324503453fd 805 SMART SM00283 505 752 9.9E-96 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00265 d58b946d4636c3e5a5f03a223c7d28d6 302 SUPERFAMILY SSF52540 1 175 2.74E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00265 d58b946d4636c3e5a5f03a223c7d28d6 302 PIRSF PIRSF006230 1 268 1.6E-95 T 12-10-2018 IPR016478 GTPase, MTG1 vfu_B00265 d58b946d4636c3e5a5f03a223c7d28d6 302 Gene3D G3DSA:3.40.50.300 3 164 6.0E-41 T 12-10-2018 vfu_B00265 d58b946d4636c3e5a5f03a223c7d28d6 302 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 1 263 1.0E-99 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis vfu_B00265 d58b946d4636c3e5a5f03a223c7d28d6 302 Pfam PF01926 50S ribosome-binding GTPase 108 172 1.3E-14 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_B00265 d58b946d4636c3e5a5f03a223c7d28d6 302 Gene3D G3DSA:1.10.1580.10 165 256 5.6E-29 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 SUPERFAMILY SSF51366 280 474 5.65E-55 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 73 91 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 Gene3D G3DSA:3.20.20.70 279 470 9.4E-177 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 SUPERFAMILY SSF51366 34 276 4.36E-82 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 278 476 31.1 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 Pfam PF00218 Indole-3-glycerol phosphate synthase 28 274 6.0E-96 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 280 471 1.4E-54 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 26 277 35.084 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 vfu_A02221 e2aa50374770741d22b51af046aa42fe 476 Gene3D G3DSA:3.20.20.70 31 278 9.4E-177 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Gene3D G3DSA:2.60.120.10 1 143 2.3E-25 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Gene3D G3DSA:3.10.580.10 144 289 8.1E-30 T 12-10-2018 vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 2.7E-13 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 SUPERFAMILY SSF51206 7 129 3.27E-28 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF00571 CBS domain 153 215 1.0E-6 T 12-10-2018 IPR000644 CBS domain vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF00571 CBS domain 226 278 1.6E-10 T 12-10-2018 IPR000644 CBS domain vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 SUPERFAMILY SSF54631 150 278 1.59E-27 T 12-10-2018 vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 SMART SM00116 159 216 0.012 T 12-10-2018 IPR000644 CBS domain vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 SMART SM00116 233 280 5.5E-6 T 12-10-2018 IPR000644 CBS domain vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 1.6E-45 T 12-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 SMART SM00100 17 134 1.3E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A01764 23efd8d8c0a2f47e8e857f51d745524a 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.5E-45 T 12-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 SUPERFAMILY SSF54909 63 148 1.88E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 SUPERFAMILY SSF46785 2 62 1.55E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 2.6E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 SMART SM00344 3 112 2.7E-45 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 6.0E-17 T 12-10-2018 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 Gene3D G3DSA:3.30.70.920 57 140 7.2E-26 T 12-10-2018 vfu_B00962 35e068820aac4b26d7a572dc176c0125 158 Gene3D G3DSA:1.10.10.10 1 56 4.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02791 2a0b95877c47b6f348577f651748ab3b 185 Pfam PF00857 Isochorismatase family 10 177 1.6E-38 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 vfu_A02791 2a0b95877c47b6f348577f651748ab3b 185 Gene3D G3DSA:3.40.50.850 3 180 2.8E-45 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_A02791 2a0b95877c47b6f348577f651748ab3b 185 SUPERFAMILY SSF52499 8 182 2.62E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_A01913 73a5fdd2e260452a409aab9403d5f5e4 216 Gene3D G3DSA:1.10.10.60 38 82 1.8E-8 T 12-10-2018 vfu_B00222 73a5fdd2e260452a409aab9403d5f5e4 216 Gene3D G3DSA:1.10.10.60 38 82 1.8E-8 T 12-10-2018 vfu_B00216 73a5fdd2e260452a409aab9403d5f5e4 216 Gene3D G3DSA:1.10.10.60 38 82 1.8E-8 T 12-10-2018 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF02929 Beta galactosidase small chain 762 1027 1.2E-67 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.60.40.10 218 332 2.7E-24 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF51445 335 626 1.66E-98 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 446 460 - T 12-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF49785 11 216 3.26E-64 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF16353 Domain of unknown function(DUF4981) 642 729 1.3E-15 T 12-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF49303 624 730 4.8E-21 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF00703 Glycosyl hydrolases family 2 218 332 8.3E-13 T 12-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF74650 752 1028 2.35E-89 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.70.98.10 740 1029 1.1E-93 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:3.20.20.80 333 627 1.4E-121 T 12-10-2018 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.60.120.260 5 217 7.7E-82 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 446 461 1.3E-38 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 144 159 1.3E-38 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 374 392 1.3E-38 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 534 549 1.3E-38 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 PRINTS PR00132 Glycosyl hydrolase family 2 signature 343 357 1.3E-38 T 12-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 334 629 1.1E-109 T 12-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Gene3D G3DSA:2.60.40.10 628 732 5.2E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 SUPERFAMILY SSF49303 218 332 2.79E-22 T 12-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 SMART SM01038 755 1028 3.2E-106 T 12-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 384 409 - T 12-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 vfu_A01802 7bbb7c6705d73cec812b37d4c64fa699 1030 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 50 216 2.8E-54 T 12-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.0E-128 T 12-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 2.2E-62 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 2.0E-260 T 12-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 Pfam PF01578 Cytochrome C assembly protein 89 297 2.8E-54 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01267 b0a3e082da84e515a181dfa5448933b4 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.3E-95 T 12-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A01976 d9104527594c6a5bb61f51e31bb86eb9 316 SUPERFAMILY SSF53213 3 309 1.06E-73 T 12-10-2018 vfu_A01976 d9104527594c6a5bb61f51e31bb86eb9 316 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 5 307 1.5E-76 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 vfu_A01976 d9104527594c6a5bb61f51e31bb86eb9 316 Hamap MF_01653 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase [mhpB]. 2 314 53.215 T 12-10-2018 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase GO:0005506|GO:0019439|GO:0047070|GO:0055114 KEGG: 00360+1.13.11.16|MetaCyc: PWY-6690 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 Gene3D G3DSA:3.40.190.10 129 318 1.2E-121 T 12-10-2018 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 Gene3D G3DSA:3.40.190.10 29 312 1.2E-121 T 12-10-2018 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PIRSF PIRSF019574 1 345 2.4E-123 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 4.6E-44 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 5.4E-86 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01890 a30867d6d219cbe9c87d823c50c6ba1f 346 SUPERFAMILY SSF53850 24 342 6.14E-95 T 12-10-2018 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.5E-124 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 8.0E-295 T 12-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:1.10.1160.10 261 339 3.5E-36 T 12-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:3.90.800.10 101 209 6.8E-106 T 12-10-2018 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 1.6E-61 T 12-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:3.40.50.620 30 247 6.8E-106 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:2.40.240.10 464 548 7.7E-31 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.507 T 12-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 SUPERFAMILY SSF50715 340 548 5.75E-78 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 SUPERFAMILY SSF52374 11 337 3.1E-103 T 12-10-2018 vfu_A02604 2e906f218ba04d498f9848ecd23fa493 556 Gene3D G3DSA:2.40.240.10 348 463 1.2E-46 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 vfu_A02267 f21b432a4443434ee2da439018c4b6f9 108 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 42 105 1.4E-12 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) vfu_A02267 f21b432a4443434ee2da439018c4b6f9 108 Gene3D G3DSA:2.30.330.10 29 107 7.6E-7 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A02267 f21b432a4443434ee2da439018c4b6f9 108 SUPERFAMILY SSF101801 40 100 9.81E-10 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 SMART SM00448 9 122 1.5E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.5E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 SUPERFAMILY SSF52172 12 132 4.55E-23 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 Gene3D G3DSA:3.40.50.2300 12 135 1.4E-20 T 12-10-2018 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 Pfam PF00072 Response regulator receiver domain 12 122 3.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 197 4.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 SMART SM00421 142 199 3.1E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 Gene3D G3DSA:1.10.10.10 136 199 3.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00136 66e6f76c91f377f09d4588fdffb1fa99 204 SUPERFAMILY SSF46894 137 197 8.5E-17 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 Pfam PF01625 Peptide methionine sulfoxide reductase 40 190 6.2E-57 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 SUPERFAMILY SSF51316 236 375 3.66E-58 T 12-10-2018 IPR011057 Mss4-like superfamily vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 39 189 1.1E-50 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 236 368 2.3E-59 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 Gene3D G3DSA:2.170.150.20 230 376 2.5E-57 T 12-10-2018 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 37 196 34.829 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 Pfam PF01641 SelR domain 240 359 1.7E-45 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 SUPERFAMILY SSF55068 17 202 3.66E-70 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00106 c75f2f9f763ffc49202defec6cf67435 376 Gene3D G3DSA:3.30.1060.10 23 207 7.5E-63 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_A02176 ccf514c006ddd05e5932eff0cf611423 448 SUPERFAMILY SSF55931 115 445 6.38E-87 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 vfu_A02176 ccf514c006ddd05e5932eff0cf611423 448 SUPERFAMILY SSF54368 13 109 1.44E-6 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A02176 ccf514c006ddd05e5932eff0cf611423 448 SMART SM01230 113 370 2.1E-81 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A02176 ccf514c006ddd05e5932eff0cf611423 448 Gene3D G3DSA:3.30.590.10 116 447 2.5E-85 T 12-10-2018 vfu_A02176 ccf514c006ddd05e5932eff0cf611423 448 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 251 266 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 vfu_A02176 ccf514c006ddd05e5932eff0cf611423 448 Pfam PF00120 Glutamine synthetase, catalytic domain 115 443 4.4E-86 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 SUPERFAMILY SSF51556 1 253 2.48E-87 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 PIRSF PIRSF005902 1 255 1.2E-81 T 12-10-2018 IPR001130 TatD family GO:0016788 vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 Gene3D G3DSA:3.20.20.140 1 255 2.4E-97 T 12-10-2018 vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.2E-91 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 vfu_A01315 0e51ba6bdc6156ee4234b2a8193e56c4 255 Pfam PF01026 TatD related DNase 3 253 1.5E-75 T 12-10-2018 IPR001130 TatD family GO:0016788 vfu_A01935 06aae231c8ce49234fc24cfd70456221 276 Gene3D G3DSA:1.10.3210.10 2 273 2.2E-67 T 12-10-2018 vfu_A01935 06aae231c8ce49234fc24cfd70456221 276 Pfam PF08668 HDOD domain 13 204 5.5E-54 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD vfu_A01935 06aae231c8ce49234fc24cfd70456221 276 SUPERFAMILY SSF109604 6 233 5.71E-57 T 12-10-2018 vfu_A02171 f4e70f0f5a5c999079732f3c723a679f 289 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 1.0E-139 T 12-10-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 vfu_A02171 f4e70f0f5a5c999079732f3c723a679f 289 Gene3D G3DSA:3.60.110.10 1 288 9.6E-107 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A02171 f4e70f0f5a5c999079732f3c723a679f 289 SUPERFAMILY SSF56317 3 282 1.15E-83 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily vfu_A02171 f4e70f0f5a5c999079732f3c723a679f 289 Pfam PF00795 Carbon-nitrogen hydrolase 8 266 1.2E-57 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 8.2E-161 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 SUPERFAMILY SSF53732 4 467 6.8E-166 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 468 61.07 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 Gene3D G3DSA:3.30.499.10 330 468 1.3E-50 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 197 210 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 211 224 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 345 356 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 135 150 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 84 97 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 110 118 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 401 414 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 121 134 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 PRINTS PR00415 Aconitase family signature 288 302 3.2E-50 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 1.3E-266 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 vfu_A00806 d0faab5273c22c0320a1a298a7f5fde2 468 Gene3D G3DSA:3.30.499.20 6 288 2.1E-98 T 12-10-2018 vfu_A01860 8fbd10229827faae0c131ddd9f56f4f9 288 Gene3D G3DSA:3.30.200.20 1 93 5.0E-21 T 12-10-2018 vfu_A01860 8fbd10229827faae0c131ddd9f56f4f9 288 SUPERFAMILY SSF56112 3 282 1.48E-40 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_A01860 8fbd10229827faae0c131ddd9f56f4f9 288 Gene3D G3DSA:3.90.1200.10 98 287 2.7E-62 T 12-10-2018 vfu_A01860 8fbd10229827faae0c131ddd9f56f4f9 288 PIRSF PIRSF006221 1 288 3.6E-104 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 vfu_A01860 8fbd10229827faae0c131ddd9f56f4f9 288 Pfam PF03881 Fructosamine kinase 1 287 9.4E-121 T 12-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 SUPERFAMILY SSF46689 3 69 5.34E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 Gene3D G3DSA:1.10.10.60 1 47 1.7E-19 T 12-10-2018 vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 Gene3D G3DSA:1.10.357.10 49 194 9.6E-22 T 12-10-2018 vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 SUPERFAMILY SSF48498 80 193 2.19E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01018 5b0d1239d20d649bb2d9de0942f19a34 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 Pfam PF00672 HAMP domain 227 276 3.7E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 3.0E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 SMART SM00388 280 338 0.0045 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 SUPERFAMILY SSF47384 264 327 1.47E-10 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 481 4.9E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 Gene3D G3DSA:1.10.287.130 231 338 2.1E-16 T 12-10-2018 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 Gene3D G3DSA:3.30.565.10 341 483 4.2E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 SMART SM00304 227 279 3.6E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 SUPERFAMILY SSF55874 340 479 1.07E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02439 09841ff4838403a1299a0303ddc2158b 484 SMART SM00387 377 482 2.9E-26 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00647 b1a974cc53596a307d831d7fba36c208 264 Pfam PF07063 Domain of unknown function (DUF1338) 30 261 5.6E-49 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 vfu_A00647 b1a974cc53596a307d831d7fba36c208 264 SMART SM01150 3 262 1.3E-115 T 12-10-2018 IPR009770 Domain of unknown function DUF1338 vfu_A00647 b1a974cc53596a307d831d7fba36c208 264 Gene3D G3DSA:3.10.180.50 3 239 2.2E-91 T 12-10-2018 vfu_A00600 ca08a4255cfefa94b9bd3f5663d5f0bc 206 Gene3D G3DSA:1.10.10.10 3 86 1.1E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00600 ca08a4255cfefa94b9bd3f5663d5f0bc 206 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 47 1.8E-6 T 12-10-2018 vfu_A00600 ca08a4255cfefa94b9bd3f5663d5f0bc 206 SUPERFAMILY SSF46785 7 184 2.8E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01214 8139467d72cf0bb7440f59355b32a99a 387 PIRSF PIRSF006078 1 376 8.0E-130 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 vfu_B01214 8139467d72cf0bb7440f59355b32a99a 387 Gene3D G3DSA:3.90.1510.10 42 276 2.7E-128 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 vfu_B01214 8139467d72cf0bb7440f59355b32a99a 387 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.6E-139 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 vfu_B01214 8139467d72cf0bb7440f59355b32a99a 387 Gene3D G3DSA:3.40.50.10350 1 361 2.7E-128 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold vfu_B01214 8139467d72cf0bb7440f59355b32a99a 387 Pfam PF02595 Glycerate kinase family 3 372 7.4E-134 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 vfu_B01214 8139467d72cf0bb7440f59355b32a99a 387 SUPERFAMILY SSF110738 1 374 1.57E-123 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 SUPERFAMILY SSF46785 11 90 8.79E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 Pfam PF03466 LysR substrate binding domain 94 301 3.3E-38 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 Gene3D G3DSA:3.40.190.10 169 270 7.9E-59 T 12-10-2018 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 5.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 5.0E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 SUPERFAMILY SSF53850 95 303 2.95E-38 T 12-10-2018 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 Gene3D G3DSA:3.40.190.10 97 298 7.9E-59 T 12-10-2018 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.1E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00567 dd4195401a3519226b24a34d15f3c280 309 Gene3D G3DSA:1.10.10.10 9 95 1.7E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00133 a5cdda89096af29d0c70a32d0ed160f2 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 200 1.6E-9 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal vfu_B00133 a5cdda89096af29d0c70a32d0ed160f2 203 Gene3D G3DSA:3.40.30.10 1 77 1.0E-22 T 12-10-2018 vfu_B00133 a5cdda89096af29d0c70a32d0ed160f2 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 1.1E-15 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_B00133 a5cdda89096af29d0c70a32d0ed160f2 203 SUPERFAMILY SSF47616 82 203 2.51E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_B00133 a5cdda89096af29d0c70a32d0ed160f2 203 Gene3D G3DSA:1.20.1050.10 83 199 7.7E-28 T 12-10-2018 vfu_B00133 a5cdda89096af29d0c70a32d0ed160f2 203 SUPERFAMILY SSF52833 1 79 1.55E-20 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00959 d88c7e6517d5093db29753fa232ab537 437 Pfam PF05525 Branched-chain amino acid transport protein 8 425 1.1E-147 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 vfu_A00959 d88c7e6517d5093db29753fa232ab537 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 4.0E-131 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 vfu_A01943 7bf3929eb5fb15d22874616c412e80c5 278 Gene3D G3DSA:1.10.10.10 215 277 4.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01943 7bf3929eb5fb15d22874616c412e80c5 278 PIRSF PIRSF012524 1 278 1.7E-100 T 12-10-2018 IPR014464 Conserved virulence factor B vfu_A01943 7bf3929eb5fb15d22874616c412e80c5 278 Pfam PF13509 S1 domain 4 63 2.0E-21 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain vfu_A01943 7bf3929eb5fb15d22874616c412e80c5 278 Pfam PF13509 S1 domain 71 132 5.4E-5 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 SUPERFAMILY SSF90123 12 329 1.07E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 SUPERFAMILY SSF52540 347 580 1.66E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 SMART SM00382 375 564 8.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 Pfam PF00005 ABC transporter 369 512 6.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 Gene3D G3DSA:3.40.50.300 343 593 3.2E-64 T 12-10-2018 vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 Gene3D G3DSA:1.20.1560.10 2 334 1.2E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 2.7E-173 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 vfu_A02201 4fb00744684f8b1e9c675fbb8d59d4f3 595 Pfam PF00664 ABC transporter transmembrane region 25 292 9.3E-41 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_A01082 632d3f3cfb12afa768eb143d3256c48b 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 369 3.2E-131 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 vfu_A01082 632d3f3cfb12afa768eb143d3256c48b 379 SUPERFAMILY SSF53756 6 377 2.06E-27 T 12-10-2018 vfu_A01082 632d3f3cfb12afa768eb143d3256c48b 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 42.462 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 vfu_A01082 632d3f3cfb12afa768eb143d3256c48b 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 3.7E-142 T 12-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 vfu_A02819 f533b4e8e0ade01a4e5ebfaf19225680 222 SUPERFAMILY SSF51182 112 206 8.47E-17 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A02819 f533b4e8e0ade01a4e5ebfaf19225680 222 Pfam PF13490 Putative zinc-finger 8 37 2.2E-5 T 12-10-2018 IPR027383 Putative zinc-finger vfu_A02819 f533b4e8e0ade01a4e5ebfaf19225680 222 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 219 6.7E-78 T 12-10-2018 IPR012807 Anti-sigma factor ChrR, putative vfu_A02819 f533b4e8e0ade01a4e5ebfaf19225680 222 Gene3D G3DSA:2.60.120.10 110 200 5.3E-24 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A02819 f533b4e8e0ade01a4e5ebfaf19225680 222 Pfam PF12973 ChrR Cupin-like domain 116 196 4.6E-14 T 12-10-2018 IPR025979 ChrR-like cupin domain vfu_A02819 f533b4e8e0ade01a4e5ebfaf19225680 222 Gene3D G3DSA:1.10.10.1320 1 108 1.4E-19 T 12-10-2018 vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 Pfam PF00294 pfkB family carbohydrate kinase 26 294 6.9E-52 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 PIRSF PIRSF000535 2 311 2.7E-95 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.1E-101 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 Gene3D G3DSA:3.40.1190.20 2 311 2.9E-93 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 SUPERFAMILY SSF53613 6 293 2.03E-69 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00276 bc458a6ba6819b5d3be04ed1ac4d817d 317 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 8.1E-101 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 vfu_B00365 2fd01f1bce4e55d06a8e965948e8d359 362 SUPERFAMILY SSF52540 45 270 7.71E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00365 2fd01f1bce4e55d06a8e965948e8d359 362 Pfam PF13614 AAA domain 48 239 1.2E-13 T 12-10-2018 IPR025669 AAA domain vfu_B00365 2fd01f1bce4e55d06a8e965948e8d359 362 Gene3D G3DSA:3.40.50.300 46 310 3.6E-32 T 12-10-2018 vfu_A02969 4bf87c9dce3bd1d5fce5202006d86256 153 Pfam PF09335 SNARE associated Golgi protein 48 149 6.3E-12 T 12-10-2018 IPR032816 SNARE associated Golgi protein vfu_A02969 4bf87c9dce3bd1d5fce5202006d86256 153 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 138 0.003 T 12-10-2018 IPR020143 Uncharacterised protein family, RP436 vfu_A00818 0caf10136db7a46ca2c738f9277af782 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 188 7.1E-49 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase vfu_A00818 0caf10136db7a46ca2c738f9277af782 196 Gene3D G3DSA:3.40.50.10420 1 195 1.9E-60 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily vfu_A00818 0caf10136db7a46ca2c738f9277af782 196 SUPERFAMILY SSF100950 4 194 2.79E-60 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_A00818 0caf10136db7a46ca2c738f9277af782 196 PIRSF PIRSF006806 1 191 4.4E-40 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase vfu_A00818 0caf10136db7a46ca2c738f9277af782 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 188 1.3E-56 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase vfu_A00245 5361cbc3df81fef643dc743124dfa5bd 325 Gene3D G3DSA:1.10.3720.10 84 314 2.7E-17 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00245 5361cbc3df81fef643dc743124dfa5bd 325 SUPERFAMILY SSF161098 90 302 5.89E-15 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00245 5361cbc3df81fef643dc743124dfa5bd 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 8.4E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00104 e560fdd2f363aa888d4a22d049e7ed68 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 177 8.8E-73 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 vfu_A00104 e560fdd2f363aa888d4a22d049e7ed68 183 SUPERFAMILY SSF51182 2 180 8.54E-76 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A00104 e560fdd2f363aa888d4a22d049e7ed68 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 2 182 7.0E-65 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 vfu_A00104 e560fdd2f363aa888d4a22d049e7ed68 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 179 1.8E-77 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 vfu_A00104 e560fdd2f363aa888d4a22d049e7ed68 183 Gene3D G3DSA:2.60.120.10 1 183 5.4E-76 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A02053 d3793da5a716402f1865a78831711618 139 SMART SM00926 1 54 4.9E-14 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02053 d3793da5a716402f1865a78831711618 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 6.0E-16 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02053 d3793da5a716402f1865a78831711618 139 Gene3D G3DSA:2.20.25.90 1 55 5.1E-18 T 12-10-2018 vfu_A02053 d3793da5a716402f1865a78831711618 139 SUPERFAMILY SSF53706 1 139 8.77E-47 T 12-10-2018 vfu_A02053 d3793da5a716402f1865a78831711618 139 Gene3D G3DSA:3.40.50.740 61 139 2.9E-29 T 12-10-2018 vfu_A02053 d3793da5a716402f1865a78831711618 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 53 2.1E-13 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 686 1.2E-178 T 12-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 Gene3D G3DSA:3.40.50.300 3 179 1.7E-42 T 12-10-2018 vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF07670 Nucleoside recognition 349 440 1.6E-13 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF07670 Nucleoside recognition 509 689 1.9E-36 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF02421 Ferrous iron transport protein B 4 161 5.4E-57 T 12-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 SUPERFAMILY SSF52540 4 172 3.11E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01243 1790530bbb8bf8f31daa1082dac6ebdf 756 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 4.4E-20 T 12-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 vfu_A02046 686082832b61ce85cfeacd313251b1f4 383 Pfam PF01924 Hydrogenase formation hypA family 16 369 1.6E-149 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 vfu_A02046 686082832b61ce85cfeacd313251b1f4 383 Gene3D G3DSA:3.40.50.11740 66 304 9.5E-106 T 12-10-2018 vfu_A02046 686082832b61ce85cfeacd313251b1f4 383 Gene3D G3DSA:3.40.50.11750 21 263 9.5E-106 T 12-10-2018 vfu_A02046 686082832b61ce85cfeacd313251b1f4 383 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 7 372 2.8E-149 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 vfu_A02046 686082832b61ce85cfeacd313251b1f4 383 PIRSF PIRSF005622 5 374 1.0E-156 T 12-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 vfu_A02046 686082832b61ce85cfeacd313251b1f4 383 Gene3D G3DSA:1.10.10.2140 320 372 7.6E-25 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:2.40.50.100 32 65 2.1E-9 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:1.10.287.470 66 89 2.1E-9 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 SUPERFAMILY SSF111369 33 89 2.22E-6 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 SUPERFAMILY SSF111369 146 248 4.32E-6 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:1.10.287.470 97 159 1.0E-9 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Pfam PF13437 HlyD family secretion protein 195 275 3.3E-6 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:2.40.50.100 196 230 3.0E-11 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 SUPERFAMILY SSF111369 100 157 5.1E-6 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Pfam PF13533 Biotin-lipoyl like 44 79 5.4E-7 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:1.10.287.470 167 195 3.0E-11 T 12-10-2018 vfu_A01684 d553e985fdcd0abe3b7bca5891e88b55 314 Gene3D G3DSA:2.40.30.170 231 306 3.0E-11 T 12-10-2018 vfu_B00970 ece9b8f8eec9d87390f225a76ee5b7b0 575 Pfam PF08308 PEGA domain 266 328 1.0E-19 T 12-10-2018 IPR013229 PEGA vfu_B00970 ece9b8f8eec9d87390f225a76ee5b7b0 575 Gene3D G3DSA:3.90.1580.10 352 574 6.4E-52 T 12-10-2018 vfu_B00970 ece9b8f8eec9d87390f225a76ee5b7b0 575 Pfam PF03781 Sulfatase-modifying factor enzyme 1 353 573 9.7E-49 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 vfu_B00970 ece9b8f8eec9d87390f225a76ee5b7b0 575 SUPERFAMILY SSF56436 353 574 2.17E-52 T 12-10-2018 IPR016187 C-type lectin fold vfu_A01842 971a2489df1e0c043e5dd1cc24a6ec98 293 SUPERFAMILY SSF161098 55 282 2.62E-40 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01842 971a2489df1e0c043e5dd1cc24a6ec98 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 292 6.4E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01842 971a2489df1e0c043e5dd1cc24a6ec98 293 Gene3D G3DSA:1.10.3720.10 51 292 2.2E-46 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00579 4a0165a739dd997a7e3671a0ecdbd451 80 Pfam PF06005 Cell division protein ZapB 1 77 1.8E-25 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 vfu_A00579 4a0165a739dd997a7e3671a0ecdbd451 80 Gene3D G3DSA:1.20.5.340 1 79 1.8E-27 T 12-10-2018 vfu_A00579 4a0165a739dd997a7e3671a0ecdbd451 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.004 T 12-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 Gene3D G3DSA:3.30.1330.40 144 273 1.2E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 Gene3D G3DSA:3.30.1330.40 5 131 3.7E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 Pfam PF01042 Endoribonuclease L-PSP 306 411 1.5E-20 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 Pfam PF01042 Endoribonuclease L-PSP 15 128 4.3E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 Pfam PF01042 Endoribonuclease L-PSP 170 272 1.1E-19 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 SUPERFAMILY SSF55298 305 417 2.04E-27 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 SUPERFAMILY SSF55298 7 135 3.61E-29 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 SUPERFAMILY SSF55298 150 280 1.05E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_B00747 c04e93157388a322f1cd811a35e750b2 421 Gene3D G3DSA:3.30.1330.40 293 417 1.4E-28 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_A01266 821934f7af0fd8b9a4b0a83c02d81c21 160 Pfam PF03100 CcmE 4 135 1.9E-45 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 vfu_A01266 821934f7af0fd8b9a4b0a83c02d81c21 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.661 T 12-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 vfu_A01266 821934f7af0fd8b9a4b0a83c02d81c21 160 Gene3D G3DSA:2.40.50.140 30 141 2.1E-40 T 12-10-2018 vfu_A01266 821934f7af0fd8b9a4b0a83c02d81c21 160 SUPERFAMILY SSF82093 30 141 1.23E-39 T 12-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 vfu_A02270 9e9433e018a5758e0bc64d936e8b1acb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.5E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A02270 9e9433e018a5758e0bc64d936e8b1acb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.5E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A02270 9e9433e018a5758e0bc64d936e8b1acb 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.5E-14 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A02270 9e9433e018a5758e0bc64d936e8b1acb 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 1.2E-23 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A02270 9e9433e018a5758e0bc64d936e8b1acb 89 PIRSF PIRSF004669 1 89 7.2E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_B01060 0d1ab96afc4873942b044675628ea148 495 Gene3D G3DSA:1.25.40.10 15 173 1.6E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01060 0d1ab96afc4873942b044675628ea148 495 SUPERFAMILY SSF48452 114 317 6.73E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01060 0d1ab96afc4873942b044675628ea148 495 Gene3D G3DSA:1.25.40.10 174 318 1.8E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02642 9b371668a02bafeb97178ef0f85b5661 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 8.6E-38 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 vfu_A02642 9b371668a02bafeb97178ef0f85b5661 154 SUPERFAMILY SSF55486 5 149 7.32E-49 T 12-10-2018 vfu_A02642 9b371668a02bafeb97178ef0f85b5661 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 23.98 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 vfu_A02642 9b371668a02bafeb97178ef0f85b5661 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site vfu_A02642 9b371668a02bafeb97178ef0f85b5661 154 Gene3D G3DSA:3.40.390.30 1 154 8.4E-58 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 vfu_A02642 9b371668a02bafeb97178ef0f85b5661 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 5.8E-37 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 vfu_A00879 f166127113a705e17c9db8b94918ade1 256 Gene3D G3DSA:1.20.120.530 97 236 1.3E-28 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_A00879 f166127113a705e17c9db8b94918ade1 256 Gene3D G3DSA:1.10.10.10 1 74 2.1E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00879 f166127113a705e17c9db8b94918ade1 256 SMART SM00345 15 74 1.1E-27 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A00879 f166127113a705e17c9db8b94918ade1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A00879 f166127113a705e17c9db8b94918ade1 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A00879 f166127113a705e17c9db8b94918ade1 256 SMART SM00895 99 227 2.9E-20 T 12-10-2018 IPR011711 GntR, C-terminal vfu_A00879 f166127113a705e17c9db8b94918ade1 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.8E-25 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A00879 f166127113a705e17c9db8b94918ade1 256 SUPERFAMILY SSF46785 5 78 1.14E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00879 f166127113a705e17c9db8b94918ade1 256 Pfam PF07729 FCD domain 99 226 9.4E-20 T 12-10-2018 IPR011711 GntR, C-terminal vfu_A00879 f166127113a705e17c9db8b94918ade1 256 SUPERFAMILY SSF48008 97 235 1.96E-21 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 SUPERFAMILY SSF56014 633 808 6.94E-47 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.1E-16 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.1E-16 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.1E-16 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.1E-16 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.1E-16 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.3E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 287 1.6E-53 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 768 3.1E-14 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 2.9E-10 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 SUPERFAMILY SSF51905 3 183 6.26E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 8.9E-11 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 8.9E-11 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 8.9E-11 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 8.9E-11 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 SUPERFAMILY SSF51905 144 310 3.05E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Gene3D G3DSA:3.50.50.60 110 246 2.0E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 3.0E-15 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Gene3D G3DSA:3.50.50.60 7 283 2.0E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 SUPERFAMILY SSF55124 502 629 3.34E-29 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 PIRSF PIRSF037149 1 835 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Gene3D G3DSA:1.10.10.1100 423 477 1.3E-13 T 12-10-2018 vfu_B00443 3ba6e6d71ea12be08322c90e54a0b82d 853 Gene3D G3DSA:3.30.413.10 631 790 4.6E-31 T 12-10-2018 vfu_B00665 258bd2d83c2641ec416acc5e97efa3ce 185 SUPERFAMILY SSF56925 30 184 1.49E-15 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_B00665 258bd2d83c2641ec416acc5e97efa3ce 185 Gene3D G3DSA:2.40.160.20 25 185 2.9E-15 T 12-10-2018 vfu_B00665 258bd2d83c2641ec416acc5e97efa3ce 185 Pfam PF13505 Outer membrane protein beta-barrel domain 11 184 1.0E-13 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel vfu_B01138 ee2fccaa23e0dfd140b6a34eab2305b7 383 SMART SM00862 20 94 3.4E-6 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B01138 ee2fccaa23e0dfd140b6a34eab2305b7 383 Pfam PF00486 Transcriptional regulatory protein, C terminal 22 93 1.1E-7 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B01138 ee2fccaa23e0dfd140b6a34eab2305b7 383 Gene3D G3DSA:1.10.10.10 1 109 3.4E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01138 ee2fccaa23e0dfd140b6a34eab2305b7 383 SUPERFAMILY SSF46894 20 94 1.13E-10 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A00371 71028090469856933d7edc92954f2652 68 SUPERFAMILY SSF54285 3 68 6.83E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp vfu_A00371 71028090469856933d7edc92954f2652 68 Gene3D G3DSA:3.10.20.30 3 68 1.0E-17 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A00371 71028090469856933d7edc92954f2652 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 2.4E-15 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis vfu_A00371 71028090469856933d7edc92954f2652 68 Pfam PF02597 ThiS family 7 68 6.7E-14 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 vfu_A00736 8b5b7206f47f7eba50617e160528744f 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 4.3E-46 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 vfu_A00736 8b5b7206f47f7eba50617e160528744f 187 Gene3D G3DSA:2.60.450.10 59 186 1.2E-37 T 12-10-2018 vfu_A00736 8b5b7206f47f7eba50617e160528744f 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 8 183 4.3E-46 T 12-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related vfu_A00736 8b5b7206f47f7eba50617e160528744f 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 23.787 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 vfu_A00736 8b5b7206f47f7eba50617e160528744f 187 PIRSF PIRSF028513 2 185 1.8E-28 T 12-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 vfu_B00201 e1fc1522265f0166a2c4eca2e526a876 94 SUPERFAMILY SSF52283 1 93 1.19E-27 T 12-10-2018 vfu_B00201 e1fc1522265f0166a2c4eca2e526a876 94 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 93 2.5E-28 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal vfu_B00201 e1fc1522265f0166a2c4eca2e526a876 94 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 12-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 vfu_B00201 e1fc1522265f0166a2c4eca2e526a876 94 SMART SM01003 4 94 2.7E-22 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal vfu_B00201 e1fc1522265f0166a2c4eca2e526a876 94 Gene3D G3DSA:3.40.50.720 1 94 1.6E-34 T 12-10-2018 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 SMART SM01049 48 139 7.3E-28 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 SMART SM00387 359 457 1.6E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01443 d57d3a3c86468df183183fc9df386962 458 Pfam PF17200 Single Cache domain 2 54 198 1.2E-41 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 SUPERFAMILY SSF55874 322 453 2.23E-21 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01443 d57d3a3c86468df183183fc9df386962 458 Gene3D G3DSA:3.30.450.20 35 212 3.3E-48 T 12-10-2018 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 4.5E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 4.5E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 4.5E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01443 d57d3a3c86468df183183fc9df386962 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 455 6.5E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01443 d57d3a3c86468df183183fc9df386962 458 Gene3D G3DSA:3.30.565.10 319 456 6.7E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01443 d57d3a3c86468df183183fc9df386962 458 Pfam PF07730 Histidine kinase 256 321 1.9E-12 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 vfu_A02232 0e03b0b590c07850929622ad5649306f 324 SUPERFAMILY SSF103088 143 259 2.49E-21 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02232 0e03b0b590c07850929622ad5649306f 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 63 4.9E-14 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain vfu_A02232 0e03b0b590c07850929622ad5649306f 324 Gene3D G3DSA:3.30.1330.60 109 301 4.6E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02232 0e03b0b590c07850929622ad5649306f 324 Pfam PF00691 OmpA family 157 252 2.6E-13 T 12-10-2018 IPR006665 OmpA-like domain vfu_A01799 37da1bbbdba19eb98606c698a3f1bbf1 67 Pfam PF04400 (Na+)-NQR maturation NqrM 21 63 2.0E-22 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM vfu_A00543 f6072e8ee5170eb3bb8e5433a16db8ea 228 Gene3D G3DSA:3.40.1280.10 1 206 4.0E-61 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_A00543 f6072e8ee5170eb3bb8e5433a16db8ea 228 SUPERFAMILY SSF75217 5 174 5.69E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_A00543 f6072e8ee5170eb3bb8e5433a16db8ea 228 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.3E-35 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 vfu_A00543 f6072e8ee5170eb3bb8e5433a16db8ea 228 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.1E-23 T 12-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 vfu_A00543 f6072e8ee5170eb3bb8e5433a16db8ea 228 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 35.242 T 12-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 vfu_A01558 2d20caf4e35685136d514abd496ddd4a 317 SUPERFAMILY SSF47648 8 71 1.27E-14 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A01558 2d20caf4e35685136d514abd496ddd4a 317 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 67 1.6E-11 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A01558 2d20caf4e35685136d514abd496ddd4a 317 Gene3D G3DSA:1.20.970.10 3 71 2.0E-16 T 12-10-2018 vfu_A01558 2d20caf4e35685136d514abd496ddd4a 317 SUPERFAMILY SSF52418 76 311 1.02E-38 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A01558 2d20caf4e35685136d514abd496ddd4a 317 Gene3D G3DSA:3.40.1030.10 72 312 9.3E-39 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 Hamap MF_01694 Biotin synthase [bioB]. 5 312 39.187 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 Pfam PF04055 Radical SAM superfamily 50 200 5.0E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 289 4.8E-17 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 SUPERFAMILY SSF102114 5 287 1.11E-85 T 12-10-2018 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 SMART SM00876 220 311 3.2E-32 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 PIRSF PIRSF001619 1 297 5.2E-128 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 TIGRFAM TIGR00433 bioB: biotin synthase 15 288 2.3E-118 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 Gene3D G3DSA:3.20.20.70 4 311 1.7E-123 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01567 9a1818fe4e2c20f1167febe9f2eb437c 318 SMART SM00729 43 255 7.9E-37 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 27.246 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 Pfam PF01491 Frataxin-like domain 1 100 8.2E-31 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 Gene3D G3DSA:3.30.920.10 1 104 9.2E-39 T 12-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 SUPERFAMILY SSF55387 1 103 2.79E-39 T 12-10-2018 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 12-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 SMART SM01219 1 104 2.6E-54 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A00436 96ccc355bf76d298744ecc465e5e6384 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 2.4E-42 T 12-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A00076 06399839390957f39946d3019de74f25 282 Gene3D G3DSA:1.10.10.60 229 282 1.4E-19 T 12-10-2018 vfu_A00076 06399839390957f39946d3019de74f25 282 Pfam PF12833 Helix-turn-helix domain 201 278 8.6E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00076 06399839390957f39946d3019de74f25 282 Gene3D G3DSA:1.10.10.60 177 228 5.8E-13 T 12-10-2018 vfu_A00076 06399839390957f39946d3019de74f25 282 SUPERFAMILY SSF51182 44 101 1.88E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A00076 06399839390957f39946d3019de74f25 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A00076 06399839390957f39946d3019de74f25 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 1.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A00076 06399839390957f39946d3019de74f25 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 1.8E-7 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A00076 06399839390957f39946d3019de74f25 282 SMART SM00342 195 278 3.4E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00076 06399839390957f39946d3019de74f25 282 SUPERFAMILY SSF46689 231 280 3.94E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00076 06399839390957f39946d3019de74f25 282 SUPERFAMILY SSF46689 181 228 3.67E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 Pfam PF01230 HIT domain 12 109 5.6E-29 T 12-10-2018 IPR001310 Histidine triad (HIT) protein vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 SUPERFAMILY SSF54197 1 113 8.79E-35 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 12-10-2018 IPR019808 Histidine triad, conserved site vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PRINTS PR00332 Histidine triad family signature 6 22 1.1E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PRINTS PR00332 Histidine triad family signature 27 45 1.1E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 PRINTS PR00332 Histidine triad family signature 95 105 1.1E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein vfu_A02405 0146a7c0c5f0f2331fe4cd1f2df2058e 116 Gene3D G3DSA:3.30.428.10 1 111 5.0E-35 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A00935 2a3de87a062b80821d6e6eab57b61427 279 Pfam PF00809 Pterin binding enzyme 18 258 2.0E-89 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A00935 2a3de87a062b80821d6e6eab57b61427 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A00935 2a3de87a062b80821d6e6eab57b61427 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 272 9.9E-103 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 vfu_A00935 2a3de87a062b80821d6e6eab57b61427 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A00935 2a3de87a062b80821d6e6eab57b61427 279 SUPERFAMILY SSF51717 5 275 2.35E-104 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A00935 2a3de87a062b80821d6e6eab57b61427 279 Gene3D G3DSA:3.20.20.20 1 278 1.5E-111 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 7.1E-49 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 SMART SM00411 1 91 7.1E-43 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 Gene3D G3DSA:4.10.520.10 2 39 5.5E-11 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 Gene3D G3DSA:4.10.520.10 40 91 2.0E-27 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.749 T 12-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.6E-30 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.0E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.0E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.0E-18 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02422 1073583ac798228f69188d7df5b415ea 94 SUPERFAMILY SSF47729 1 91 1.06E-30 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_B01172 901c9e88e08a1553d91e04fbfa5003e0 94 Gene3D G3DSA:2.60.200.60 2 94 1.9E-41 T 12-10-2018 vfu_B01172 901c9e88e08a1553d91e04fbfa5003e0 94 Pfam PF05488 PAAR motif 19 85 1.8E-18 T 12-10-2018 IPR008727 PAAR motif vfu_A02988 f777cabaeee57626751a36ce0d314561 237 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 vfu_A02988 f777cabaeee57626751a36ce0d314561 237 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 226 4.3E-75 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 vfu_A02988 f777cabaeee57626751a36ce0d314561 237 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 227 1.3E-78 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 vfu_A02988 f777cabaeee57626751a36ce0d314561 237 Gene3D G3DSA:3.90.550.10 1 232 5.2E-75 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A02988 f777cabaeee57626751a36ce0d314561 237 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 226 43.415 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 vfu_A02988 f777cabaeee57626751a36ce0d314561 237 SUPERFAMILY SSF53448 4 227 5.42E-60 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A02073 fbab6bd0ba559f888d0f703a05701b5e 382 Gene3D G3DSA:3.40.1710.10 40 119 9.5E-6 T 12-10-2018 vfu_A02073 fbab6bd0ba559f888d0f703a05701b5e 382 Pfam PF12698 ABC-2 family transporter protein 22 368 1.2E-46 T 12-10-2018 vfu_B00487 f886df948c87729b85f446a88917a61f 277 SUPERFAMILY SSF46689 224 272 3.09E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00487 f886df948c87729b85f446a88917a61f 277 SMART SM00342 187 269 2.7E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00487 f886df948c87729b85f446a88917a61f 277 Gene3D G3DSA:1.10.10.60 166 274 1.1E-30 T 12-10-2018 vfu_B00487 f886df948c87729b85f446a88917a61f 277 SUPERFAMILY SSF51215 22 146 4.32E-16 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_B00487 f886df948c87729b85f446a88917a61f 277 Pfam PF12833 Helix-turn-helix domain 193 271 6.9E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00487 f886df948c87729b85f446a88917a61f 277 Pfam PF02311 AraC-like ligand binding domain 18 146 1.7E-14 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B00487 f886df948c87729b85f446a88917a61f 277 SUPERFAMILY SSF46689 171 221 1.8E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 SUPERFAMILY SSF55073 582 735 3.37E-50 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 SMART SM00267 565 736 7.0E-59 T 12-10-2018 IPR000160 GGDEF domain vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 Pfam PF17159 Membrane-associated sensor domain 32 249 1.3E-58 T 12-10-2018 IPR033425 Membrane-associated sensor domain MASE3 vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 575 735 1.1E-46 T 12-10-2018 IPR000160 GGDEF domain vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 Pfam PF00990 Diguanylate cyclase, GGDEF domain 577 731 4.1E-46 T 12-10-2018 IPR000160 GGDEF domain vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 SMART SM01079 301 480 7.7E-28 T 12-10-2018 IPR006189 CHASE domain vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 Gene3D G3DSA:3.30.70.270 573 736 5.9E-57 T 12-10-2018 vfu_A01452 9ba44ce08a6f82ddd7fae32428ab13f2 736 Pfam PF03924 CHASE domain 324 451 9.0E-12 T 12-10-2018 IPR006189 CHASE domain vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 Pfam PF13183 4Fe-4S dicluster domain 147 219 7.0E-11 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 Gene3D G3DSA:3.10.20.30 1 106 1.2E-34 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 Gene3D G3DSA:1.10.1060.10 107 244 2.6E-50 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 SUPERFAMILY SSF54292 5 106 2.42E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.8E-33 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 3.0E-94 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00610 3dc3e768d1f20e6fb5a5426889483fcd 246 SUPERFAMILY SSF46548 107 226 1.74E-30 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B00513 87d6b5ccc3b70b21a7d6f271774a160a 430 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 1 361 7.8E-145 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 vfu_B00513 87d6b5ccc3b70b21a7d6f271774a160a 430 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 2 428 7.1E-143 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 vfu_B00513 87d6b5ccc3b70b21a7d6f271774a160a 430 PIRSF PIRSF004539 1 429 1.3E-175 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:1.10.10.60 1009 1060 4.5E-9 T 12-10-2018 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 Pfam PF07494 Two component regulator propeller 286 308 0.0059 T 12-10-2018 IPR011110 Two component regulator propeller vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:1.10.10.60 1061 1114 5.1E-18 T 12-10-2018 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:2.130.10.10 23 313 2.4E-20 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 Pfam PF12833 Helix-turn-helix domain 1035 1110 1.5E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 Gene3D G3DSA:2.130.10.10 338 619 1.7E-20 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1094 1110 5.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1079 1094 5.0E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 SUPERFAMILY SSF63829 259 583 9.59E-6 T 12-10-2018 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1065 1106 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 SMART SM00342 1028 1110 1.6E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01241 8a6328345d805e62fad4a8ee32ac20fc 1117 SUPERFAMILY SSF46689 1064 1111 2.8E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 PIRSF PIRSF004486 1 316 7.4E-100 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 Pfam PF01795 MraW methylase family 5 315 5.4E-111 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 SUPERFAMILY SSF81799 113 216 1.01E-30 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 3.0E-119 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 SUPERFAMILY SSF53335 7 316 1.58E-44 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 Gene3D G3DSA:1.10.150.170 112 218 1.1E-102 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.064 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 vfu_A02940 ab0cb230bef9f14c112deafd0dd00bc5 316 Gene3D G3DSA:3.40.50.150 10 315 1.1E-102 T 12-10-2018 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 Pfam PF12833 Helix-turn-helix domain 182 260 1.2E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 SMART SM00342 176 258 7.4E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 SUPERFAMILY SSF46689 213 260 1.33E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 258 8.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 227 242 8.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 Gene3D G3DSA:1.10.10.60 156 261 5.0E-23 T 12-10-2018 vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 Gene3D G3DSA:2.60.120.10 16 104 1.4E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01271 b879416c1f2d71e6832ac289ddf8592e 262 SUPERFAMILY SSF51182 20 185 1.11E-9 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 SUPERFAMILY SSF51215 27 153 2.22E-15 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 Gene3D G3DSA:1.10.10.60 171 233 7.5E-17 T 12-10-2018 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 SMART SM00342 191 273 2.1E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 Pfam PF12833 Helix-turn-helix domain 197 273 5.4E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 228 269 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 Gene3D G3DSA:1.10.10.2730 234 275 8.2E-8 T 12-10-2018 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 Pfam PF02311 AraC-like ligand binding domain 25 150 2.6E-17 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 SUPERFAMILY SSF46689 175 225 1.3E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01812 4cb86e8ea9203d936ba3400a5801f49e 278 SUPERFAMILY SSF46689 228 274 5.38E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01309 195b424be4489328aac4bcbbf4cd6764 134 SUPERFAMILY SSF82784 1 132 5.1E-38 T 12-10-2018 IPR036102 OsmC/Ohr superfamily vfu_B01309 195b424be4489328aac4bcbbf4cd6764 134 Gene3D G3DSA:2.20.25.10 1 34 2.1E-17 T 12-10-2018 vfu_B01309 195b424be4489328aac4bcbbf4cd6764 134 Pfam PF02566 OsmC-like protein 29 127 5.6E-16 T 12-10-2018 IPR003718 OsmC/Ohr family vfu_B01309 195b424be4489328aac4bcbbf4cd6764 134 Gene3D G3DSA:3.30.300.20 35 134 6.5E-24 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A02779 7e31673948dc939ac837d1609f827809 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A02779 7e31673948dc939ac837d1609f827809 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.038 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 SUPERFAMILY SSF54919 1 140 1.44E-60 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.0E-56 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 Gene3D G3DSA:3.30.70.141 1 143 8.9E-59 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 SMART SM00562 3 140 5.7E-89 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 8.9E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 8.9E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 8.9E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 8.9E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_A02779 7e31673948dc939ac837d1609f827809 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 8.9E-38 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 vfu_B00774 03018dcb8741834bec12eaaec649d4d7 282 PIRSF PIRSF006232 3 282 1.0E-83 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 vfu_B00774 03018dcb8741834bec12eaaec649d4d7 282 Gene3D G3DSA:2.60.120.10 143 249 2.4E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00774 03018dcb8741834bec12eaaec649d4d7 282 Pfam PF02678 Pirin 31 121 1.6E-33 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 vfu_B00774 03018dcb8741834bec12eaaec649d4d7 282 Gene3D G3DSA:2.60.120.10 18 275 2.4E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00774 03018dcb8741834bec12eaaec649d4d7 282 Pfam PF05726 Pirin C-terminal cupin domain 181 279 6.9E-25 T 12-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 vfu_B00774 03018dcb8741834bec12eaaec649d4d7 282 SUPERFAMILY SSF51182 7 280 1.24E-71 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 Pfam PF02743 Cache domain 38 257 3.3E-27 T 12-10-2018 IPR033479 Double Cache domain 1 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 SMART SM00304 384 451 76.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 SMART SM00304 295 349 1.8E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 Gene3D G3DSA:3.30.450.20 51 269 6.6E-57 T 12-10-2018 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 590 2.4E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 SUPERFAMILY SSF58104 317 626 6.28E-78 T 12-10-2018 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 SMART SM00283 364 625 8.0E-71 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 292 3.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 3.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 3.1E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 SUPERFAMILY SSF103190 63 176 3.22E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 Pfam PF00672 HAMP domain 296 343 1.2E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 Gene3D G3DSA:3.30.450.20 64 167 6.6E-57 T 12-10-2018 vfu_A00028 c1632e5c5a72709810fc9a3d6b0cb071 626 Gene3D G3DSA:1.10.287.950 295 626 2.7E-73 T 12-10-2018 vfu_A00071 633f562534602e770c9856185c017da5 287 SUPERFAMILY SSF51395 2 284 1.76E-75 T 12-10-2018 vfu_A00071 633f562534602e770c9856185c017da5 287 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 285 4.7E-115 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 vfu_A00071 633f562534602e770c9856185c017da5 287 Gene3D G3DSA:3.20.20.70 1 213 2.7E-65 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00071 633f562534602e770c9856185c017da5 287 PIRSF PIRSF006621 1 286 5.0E-87 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A00071 633f562534602e770c9856185c017da5 287 Gene3D G3DSA:1.10.1200.80 217 287 4.4E-7 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 vfu_A00071 633f562534602e770c9856185c017da5 287 Pfam PF01207 Dihydrouridine synthase (Dus) 1 279 8.2E-99 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A00071 633f562534602e770c9856185c017da5 287 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 59 77 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A02854 6db52e3b34427f6f04c592b0a84c0894 321 Gene3D G3DSA:1.20.81.30 144 257 5.7E-7 T 12-10-2018 vfu_A02854 6db52e3b34427f6f04c592b0a84c0894 321 Pfam PF00482 Type II secretion system (T2SS), protein F 154 278 2.1E-19 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 Hamap MF_01201 Alanine racemase. 4 360 35.452 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 3.3E-72 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 SUPERFAMILY SSF51419 11 237 1.3E-70 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 Gene3D G3DSA:3.20.20.10 13 220 1.1E-132 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 SMART SM01005 236 360 5.9E-66 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 TIGRFAM TIGR00492 alr: alanine racemase 6 359 2.8E-130 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 Gene3D G3DSA:2.40.37.10 11 355 1.1E-132 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 252 267 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 158 169 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 195 222 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 342 355 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 123 135 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 63 81 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 269 284 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 29 45 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 PRINTS PR00992 Alanine racemase signature 290 307 1.6E-70 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 SUPERFAMILY SSF50621 230 361 6.28E-47 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A03146 752cc2d4a3ea1ecec717e9ab0ac51ab7 364 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 1.0E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_A00165 ce0a3c9764a9d877fd7af92bd47cf348 405 SUPERFAMILY SSF56349 98 392 1.03E-53 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A00165 ce0a3c9764a9d877fd7af92bd47cf348 405 Gene3D G3DSA:1.10.443.10 203 402 4.1E-20 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A00165 ce0a3c9764a9d877fd7af92bd47cf348 405 Pfam PF00589 Phage integrase family 202 373 3.2E-15 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A00165 ce0a3c9764a9d877fd7af92bd47cf348 405 Pfam PF13356 Arm DNA-binding domain 4 88 1.7E-16 T 12-10-2018 IPR025166 Integrase, DNA-binding domain vfu_A00165 ce0a3c9764a9d877fd7af92bd47cf348 405 Gene3D G3DSA:1.10.150.130 90 201 6.0E-30 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A00165 ce0a3c9764a9d877fd7af92bd47cf348 405 Gene3D G3DSA:3.30.160.390 3 89 8.0E-19 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 SMART SM00382 166 303 2.4E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 SUPERFAMILY SSF52172 27 190 4.69E-6 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 Gene3D G3DSA:3.40.50.300 145 309 3.9E-40 T 12-10-2018 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 Gene3D G3DSA:1.10.8.60 310 386 2.1E-23 T 12-10-2018 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 Pfam PF00158 Sigma-54 interaction domain 146 305 2.6E-37 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 SUPERFAMILY SSF52540 146 378 3.27E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 6.6E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 SUPERFAMILY SSF46689 350 438 1.25E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 3.6E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 Gene3D G3DSA:1.10.10.60 388 440 8.4E-13 T 12-10-2018 vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A00963 948a009aea87cd42537003c0fe985c0e 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF55785 626 741 3.56E-9 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SMART SM00387 897 1006 1.8E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:3.40.50.2300 1022 1143 1.1E-16 T 12-10-2018 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 2.3E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:3.30.450.20 616 746 5.5E-12 T 12-10-2018 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF47384 773 854 8.24E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:3.30.565.10 852 1006 3.3E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF12860 PAS fold 634 748 1.4E-44 T 12-10-2018 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SMART SM00448 1026 1139 2.3E-17 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 2.8E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF52172 1026 1142 7.97E-19 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:1.10.287.130 747 851 2.1E-14 T 12-10-2018 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SMART SM00388 788 853 2.7E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 Gene3D G3DSA:1.20.1730.10 33 500 4.6E-9 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_A00062 e66dc93f476af3bac8e958e40118ac10 1143 SUPERFAMILY SSF55874 843 1002 3.41E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 Gene3D G3DSA:3.40.50.300 5 239 6.3E-72 T 12-10-2018 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 Gene3D G3DSA:2.40.30.10 242 327 5.1E-27 T 12-10-2018 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 3.4E-200 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.268 T 12-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 SUPERFAMILY SSF52540 22 229 4.0E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 SUPERFAMILY SSF50447 242 327 4.57E-24 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 231 5.7E-44 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 Gene3D G3DSA:2.40.30.10 331 433 8.7E-28 T 12-10-2018 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 SUPERFAMILY SSF50465 332 434 3.5E-29 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 211 3.3E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 6.8E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 6.8E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 6.8E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 6.8E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A00703 9163b5e1e8fc1ea1392b9c98cce91162 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 6.8E-13 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:3.40.50.720 1 113 2.5E-34 T 12-10-2018 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 SUPERFAMILY SSF51735 1 113 6.3E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 SUPERFAMILY SSF53790 224 290 3.34E-5 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:3.40.1010.10 207 295 1.3E-5 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 7.1E-11 T 12-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 SUPERFAMILY SSF75615 109 206 1.03E-21 T 12-10-2018 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:3.30.160.110 114 149 5.8E-13 T 12-10-2018 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 195 8.5E-59 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 Gene3D G3DSA:1.10.8.210 150 206 7.4E-9 T 12-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A02005 7ac2bede433d2554261e3e7c7d1432dc 312 Pfam PF13241 Putative NAD(P)-binding 6 116 5.3E-30 T 12-10-2018 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 Gene3D G3DSA:3.20.20.60 1 419 1.2E-181 T 12-10-2018 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 Pfam PF00463 Isocitrate lyase family 259 436 7.0E-53 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 Pfam PF00463 Isocitrate lyase family 14 257 6.0E-62 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 SUPERFAMILY SSF51621 6 436 5.83E-154 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 PIRSF PIRSF001362 1 436 9.7E-225 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 8.8E-114 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 vfu_A02799 f350ee23ef053ab6ecbcee992cba3641 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 6.5E-90 T 12-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 Gene3D G3DSA:3.40.630.10 27 360 4.9E-79 T 12-10-2018 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.0E-125 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 Gene3D G3DSA:3.30.70.360 177 292 4.9E-79 T 12-10-2018 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 Pfam PF07687 Peptidase dimerisation domain 174 285 7.7E-26 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_A00619 3db53f46e98baad019923b5d217a0262 378 Pfam PF01546 Peptidase family M20/M25/M40 72 373 3.4E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.959 T 12-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 SUPERFAMILY SSF55031 177 292 6.73E-23 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_A00619 3db53f46e98baad019923b5d217a0262 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 SUPERFAMILY SSF53187 3 377 1.17E-55 T 12-10-2018 vfu_A00619 3db53f46e98baad019923b5d217a0262 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 vfu_A02948 9ae440ff383cd88845763c281a9a218c 245 Pfam PF02167 Cytochrome C1 family 34 244 2.3E-16 T 12-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 vfu_A02948 9ae440ff383cd88845763c281a9a218c 245 Gene3D G3DSA:1.10.760.10 26 210 8.3E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A02948 9ae440ff383cd88845763c281a9a218c 245 SUPERFAMILY SSF46626 16 209 9.17E-49 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 86 6.0E-31 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 124 1.7E-44 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 124 7.4E-35 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 SUPERFAMILY SSF56214 1 124 1.31E-31 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 27.238 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 121 2.1E-24 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 vfu_A00840 a2b74fd3f5fe68a529dd08953042782e 125 Gene3D G3DSA:3.90.470.20 1 125 1.9E-41 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 vfu_B00941 356754f7ecf78d93e0b7e93135c94024 297 Gene3D G3DSA:1.10.10.10 3 89 3.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00941 356754f7ecf78d93e0b7e93135c94024 297 Pfam PF03466 LysR substrate binding domain 88 289 4.2E-42 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00941 356754f7ecf78d93e0b7e93135c94024 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.0E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00941 356754f7ecf78d93e0b7e93135c94024 297 SUPERFAMILY SSF53850 89 292 5.79E-44 T 12-10-2018 vfu_B00941 356754f7ecf78d93e0b7e93135c94024 297 Gene3D G3DSA:3.40.190.290 91 288 2.8E-60 T 12-10-2018 vfu_B00941 356754f7ecf78d93e0b7e93135c94024 297 SUPERFAMILY SSF46785 4 111 1.9E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00906 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.40.120.10 1 170 7.6E-45 T 12-10-2018 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.30.310.50 370 470 1.4E-16 T 12-10-2018 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 464 3.6E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 SUPERFAMILY SSF55957 374 466 1.44E-18 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 2.7E-25 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 4.7E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.40.120.10 171 365 7.5E-59 T 12-10-2018 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Gene3D G3DSA:3.40.120.10 263 369 7.5E-59 T 12-10-2018 vfu_A00906 2df547fb104ca079686654ccadb75996 470 SUPERFAMILY SSF53738 2 187 1.96E-38 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 6.5E-36 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 SUPERFAMILY SSF53738 250 379 3.1E-29 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A00906 2df547fb104ca079686654ccadb75996 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00124 659cc37bae7f63da651ec70bd6da9870 285 Pfam PF02698 DUF218 domain 5 134 4.0E-12 T 12-10-2018 IPR003848 Domain of unknown function DUF218 vfu_A03145 51b55ef4397c866be55d69863f0801de 139 Gene3D G3DSA:2.60.120.460 3 139 1.5E-42 T 12-10-2018 IPR035917 YjbQ-like superfamily vfu_A03145 51b55ef4397c866be55d69863f0801de 139 PIRSF PIRSF004681 1 139 1.8E-45 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 vfu_A03145 51b55ef4397c866be55d69863f0801de 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 3.3E-39 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 vfu_A03145 51b55ef4397c866be55d69863f0801de 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 139 2.2E-44 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 vfu_A03145 51b55ef4397c866be55d69863f0801de 139 SUPERFAMILY SSF111038 1 139 4.84E-50 T 12-10-2018 IPR035917 YjbQ-like superfamily vfu_A03145 51b55ef4397c866be55d69863f0801de 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 vfu_A01929 d486fee557e0d52f12eb4c5e00a5eb85 180 PIRSF PIRSF010252 1 178 1.6E-69 T 12-10-2018 IPR009809 Cell division protein ZapC vfu_A01929 d486fee557e0d52f12eb4c5e00a5eb85 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 38.056 T 12-10-2018 IPR009809 Cell division protein ZapC vfu_A01929 d486fee557e0d52f12eb4c5e00a5eb85 180 Pfam PF07126 Cell-division protein ZapC 1 168 8.3E-68 T 12-10-2018 IPR009809 Cell division protein ZapC vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 SUPERFAMILY SSF117143 72 358 7.19E-77 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 379 7.9E-95 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 Gene3D G3DSA:2.60.98.20 144 279 1.3E-32 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 Pfam PF07559 Flagellar basal body protein FlaE 173 278 8.1E-21 T 12-10-2018 IPR011491 Flagellar hook protein FlgE vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 330 394 5.5E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02262 b955a676c78c61c238b90d95ef897a80 397 Pfam PF00460 Flagella basal body rod protein 3 33 1.1E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01429 149709d7b456c1d7455225d799e7a730 271 SMART SM00342 173 255 1.2E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01429 149709d7b456c1d7455225d799e7a730 271 Gene3D G3DSA:1.10.10.60 152 264 1.4E-23 T 12-10-2018 vfu_A01429 149709d7b456c1d7455225d799e7a730 271 Pfam PF12833 Helix-turn-helix domain 179 256 2.5E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01429 149709d7b456c1d7455225d799e7a730 271 SUPERFAMILY SSF46689 208 257 4.18E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01429 149709d7b456c1d7455225d799e7a730 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 251 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 SUPERFAMILY SSF46785 7 85 4.24E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 SUPERFAMILY SSF53850 92 306 1.18E-46 T 12-10-2018 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Pfam PF03466 LysR substrate binding domain 96 307 7.6E-29 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.7E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.9E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Gene3D G3DSA:3.40.190.10 182 280 8.0E-58 T 12-10-2018 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Gene3D G3DSA:3.40.190.10 94 304 8.0E-58 T 12-10-2018 vfu_A00383 963e49a1c4c9d8eb5d5c7f28fc01110e 313 Gene3D G3DSA:1.10.10.10 2 89 2.1E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 Gene3D G3DSA:3.30.450.40 86 257 4.2E-33 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 Pfam PF09339 IclR helix-turn-helix domain 14 62 1.6E-12 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 Pfam PF01614 Bacterial transcriptional regulator 134 256 1.7E-14 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 SUPERFAMILY SSF55781 84 256 1.28E-24 T 12-10-2018 vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 SUPERFAMILY SSF46785 12 82 7.27E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 Gene3D G3DSA:1.10.10.10 5 82 2.8E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01963 4cff3dc1af5e624e803dc46ec130fed5 272 SMART SM00346 11 101 1.1E-24 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 Pfam PF00072 Response regulator receiver domain 4 113 7.9E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 Gene3D G3DSA:3.40.50.2300 1 136 3.2E-32 T 12-10-2018 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 SMART SM00421 144 201 5.0E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 SUPERFAMILY SSF52172 1 177 4.55E-32 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00669 3d768cb6d1aed117f3718975293562db 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 3.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 3.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 3.6E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 1.4E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 SMART SM00448 2 114 9.0E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00669 3d768cb6d1aed117f3718975293562db 207 Gene3D G3DSA:1.10.10.10 137 207 1.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00669 3d768cb6d1aed117f3718975293562db 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A00316 b4cc36d553e1bba47f1d8bff9ead49bf 245 Pfam PF00005 ABC transporter 17 168 2.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00316 b4cc36d553e1bba47f1d8bff9ead49bf 245 Gene3D G3DSA:3.40.50.300 1 243 4.9E-75 T 12-10-2018 vfu_A00316 b4cc36d553e1bba47f1d8bff9ead49bf 245 SUPERFAMILY SSF52540 1 238 3.99E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00316 b4cc36d553e1bba47f1d8bff9ead49bf 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00316 b4cc36d553e1bba47f1d8bff9ead49bf 245 SMART SM00382 26 216 7.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00316 b4cc36d553e1bba47f1d8bff9ead49bf 245 PIRSF PIRSF039085 1 244 5.1E-104 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 vfu_A00902 def24a8684d8092a0d8703f55e452599 409 SUPERFAMILY SSF111352 12 383 4.32E-106 T 12-10-2018 vfu_A00902 def24a8684d8092a0d8703f55e452599 409 Pfam PF00909 Ammonium Transporter Family 18 398 7.2E-100 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 vfu_A00902 def24a8684d8092a0d8703f55e452599 409 Gene3D G3DSA:1.10.3430.10 2 408 3.0E-119 T 12-10-2018 IPR029020 Ammonium/urea transporter vfu_A00902 def24a8684d8092a0d8703f55e452599 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 vfu_A00902 def24a8684d8092a0d8703f55e452599 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 6.6E-204 T 12-10-2018 IPR019879 Ammonium transporter, marine subtype vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 SUPERFAMILY SSF52540 198 676 5.8E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 Gene3D G3DSA:3.40.50.300 195 334 5.1E-27 T 12-10-2018 vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 Pfam PF13361 UvrD-like helicase C-terminal domain 593 666 1.9E-18 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 1.6E-52 T 12-10-2018 IPR022161 DNA helicase IV, N-terminal domain vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 Gene3D G3DSA:3.40.50.300 395 525 4.3E-29 T 12-10-2018 vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 Gene3D G3DSA:3.40.50.300 591 675 1.5E-19 T 12-10-2018 vfu_B00338 5ecf0972991efe9f6ab9543c5cf15d03 687 Pfam PF00580 UvrD/REP helicase N-terminal domain 200 496 2.7E-43 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 vfu_A01298 f34bbf5ccb9e37e92abcb15cd87ac657 519 Pfam PF00916 Sulfate permease family 13 374 1.4E-55 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 vfu_A01298 f34bbf5ccb9e37e92abcb15cd87ac657 519 SUPERFAMILY SSF81665 119 401 2.48E-5 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 vfu_A01298 f34bbf5ccb9e37e92abcb15cd87ac657 519 Pfam PF01740 STAS domain 416 503 2.3E-6 T 12-10-2018 IPR002645 STAS domain vfu_A01298 f34bbf5ccb9e37e92abcb15cd87ac657 519 SUPERFAMILY SSF52091 415 498 6.08E-11 T 12-10-2018 IPR036513 STAS domain superfamily vfu_A01298 f34bbf5ccb9e37e92abcb15cd87ac657 519 Gene3D G3DSA:3.30.750.24 408 499 2.1E-28 T 12-10-2018 IPR036513 STAS domain superfamily vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 Gene3D G3DSA:3.30.2340.10 170 302 1.7E-104 T 12-10-2018 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 12-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 27.685 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 11 227 3.2E-53 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 3.9E-19 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 2.2E-40 T 12-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 SUPERFAMILY SSF55120 6 338 5.32E-92 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02986 d3ad45ac7c3cfba2e1ec119039b55233 348 Gene3D G3DSA:3.30.2350.20 18 337 1.7E-104 T 12-10-2018 vfu_A01817 1ac99c59f4493b95bf57ca76405c5346 418 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 28 414 5.3E-227 T 12-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 vfu_A01817 1ac99c59f4493b95bf57ca76405c5346 418 SUPERFAMILY SSF54506 28 205 2.28E-68 T 12-10-2018 vfu_A01817 1ac99c59f4493b95bf57ca76405c5346 418 Gene3D G3DSA:3.10.310.10 34 408 6.7E-148 T 12-10-2018 vfu_A01817 1ac99c59f4493b95bf57ca76405c5346 418 Pfam PF04303 PrpF protein 29 411 6.6E-175 T 12-10-2018 IPR007400 PrpF protein vfu_A01817 1ac99c59f4493b95bf57ca76405c5346 418 Gene3D G3DSA:3.10.310.10 204 394 6.7E-148 T 12-10-2018 vfu_A01817 1ac99c59f4493b95bf57ca76405c5346 418 SUPERFAMILY SSF54506 209 413 3.77E-76 T 12-10-2018 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 SUPERFAMILY SSF56601 198 577 1.08E-89 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 Gene3D G3DSA:3.30.450.330 247 571 7.4E-102 T 12-10-2018 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 30 582 44.207 T 12-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 567 3.0E-75 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 SUPERFAMILY SSF56519 74 245 2.49E-43 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 Gene3D G3DSA:3.90.1310.30 70 245 3.6E-43 T 12-10-2018 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 Gene3D G3DSA:3.40.710.10 307 489 7.4E-102 T 12-10-2018 vfu_A02938 b981109de6277b7601ecaaf562f414a1 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 79 232 6.9E-18 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:2.40.33.10 74 172 1.5E-156 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:3.20.20.60 6 341 1.5E-156 T 12-10-2018 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 3.0E-168 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 2.6E-55 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 1.7E-129 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 Gene3D G3DSA:3.40.1380.20 342 476 1.5E-156 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 3.3E-29 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF52935 329 480 6.67E-38 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF50800 74 169 4.36E-25 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily vfu_A01324 9141bcbeafa018e781d70c99a8eafbef 481 SUPERFAMILY SSF51621 4 346 6.28E-87 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 SUPERFAMILY SSF100950 63 218 3.84E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 SMART SM01134 57 218 4.4E-57 T 12-10-2018 vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 SMART SM00420 1 45 3.3E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 SUPERFAMILY SSF46785 2 48 6.98E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 Pfam PF08220 DeoR-like helix-turn-helix domain 1 45 5.2E-13 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 43 1.0E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 11 25 1.0E-5 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A03024 45962d4af9f8504be227b70ddb81c307 237 Pfam PF00455 DeoR C terminal sensor domain 62 217 3.2E-44 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 SUPERFAMILY SSF56954 171 267 1.83E-5 T 12-10-2018 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 Pfam PF13533 Biotin-lipoyl like 75 108 1.1E-5 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 SUPERFAMILY SSF111369 63 135 1.57E-6 T 12-10-2018 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 30 463 6.8E-135 T 12-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 443 463 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 4.4E-48 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 Gene3D G3DSA:2.40.30.170 328 446 1.7E-11 T 12-10-2018 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 Gene3D G3DSA:1.20.1600.10 169 273 6.0E-6 T 12-10-2018 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 Pfam PF13437 HlyD family secretion protein 316 430 3.8E-17 T 12-10-2018 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 ProSitePatterns PS00543 HlyD family secretion proteins signature. 428 450 - T 12-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 vfu_B00343 60e710c19966c72bc9a236a139ea709a 463 Gene3D G3DSA:2.40.50.100 71 143 4.2E-7 T 12-10-2018 vfu_A01806 4b6c0cb9fdb0647d8b68e1b32845506d 129 PIRSF PIRSF028139 18 129 2.0E-41 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase vfu_A01806 4b6c0cb9fdb0647d8b68e1b32845506d 129 Pfam PF08883 Dopa 4,5-dioxygenase family 28 127 4.6E-32 T 12-10-2018 IPR014980 Dopa 4,5-dioxygenase vfu_A01806 4b6c0cb9fdb0647d8b68e1b32845506d 129 Gene3D G3DSA:3.30.70.1240 17 129 2.1E-38 T 12-10-2018 IPR023389 DOPA-like superfamily vfu_A01806 4b6c0cb9fdb0647d8b68e1b32845506d 129 SUPERFAMILY SSF143410 19 129 3.4E-41 T 12-10-2018 IPR023389 DOPA-like superfamily vfu_A01986 048061410afa86f0cffde17944bd269c 505 SMART SM00267 338 504 3.1E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_A01986 048061410afa86f0cffde17944bd269c 505 Gene3D G3DSA:3.30.70.270 335 504 1.1E-45 T 12-10-2018 vfu_A01986 048061410afa86f0cffde17944bd269c 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 350 500 1.8E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_A01986 048061410afa86f0cffde17944bd269c 505 Pfam PF03924 CHASE domain 75 264 2.6E-25 T 12-10-2018 IPR006189 CHASE domain vfu_A01986 048061410afa86f0cffde17944bd269c 505 SUPERFAMILY SSF55073 354 503 3.14E-39 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01986 048061410afa86f0cffde17944bd269c 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 347 504 6.0E-38 T 12-10-2018 IPR000160 GGDEF domain vfu_A01986 048061410afa86f0cffde17944bd269c 505 SMART SM01079 71 266 3.1E-23 T 12-10-2018 IPR006189 CHASE domain vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 Gene3D G3DSA:3.40.640.10 3 255 3.2E-78 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 Gene3D G3DSA:3.90.1150.10 256 391 2.3E-41 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 PIRSF PIRSF001434 1 391 4.6E-126 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 1.1E-175 T 12-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 SUPERFAMILY SSF53383 18 388 1.33E-100 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01668 e817ea1b9c4b08b687f01b0dad3f4dcf 401 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 387 4.3E-118 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 SUPERFAMILY SSF53383 1 395 2.57E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01766 8931419bdcf5d240fb30409a02067739 396 Gene3D G3DSA:3.40.640.10 60 300 1.8E-155 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 Gene3D G3DSA:3.90.1150.10 5 392 1.8E-155 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.6E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.6E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.6E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.6E-39 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01766 8931419bdcf5d240fb30409a02067739 396 Pfam PF00155 Aminotransferase class I and II 27 392 5.5E-81 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 Pfam PF00072 Response regulator receiver domain 186 306 1.8E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 SMART SM00448 184 305 1.5E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 SMART SM00260 17 158 2.5E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 SUPERFAMILY SSF52172 183 310 1.24E-21 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 SUPERFAMILY SSF50341 16 161 4.71E-34 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 Gene3D G3DSA:2.40.50.180 39 158 3.3E-28 T 12-10-2018 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 Pfam PF01584 CheW-like domain 21 160 6.7E-35 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 PIRSF PIRSF002867 1 312 1.4E-104 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 Gene3D G3DSA:3.40.50.2300 183 311 6.2E-22 T 12-10-2018 vfu_A01326 019efd08f7a31934ac4b7a957bb15b6f 313 Gene3D G3DSA:2.30.30.40 24 152 3.3E-28 T 12-10-2018 vfu_A01840 636789233e32c61b14af713073be573c 182 Pfam PF00005 ABC transporter 40 181 1.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01840 636789233e32c61b14af713073be573c 182 Gene3D G3DSA:3.40.50.300 10 181 8.5E-54 T 12-10-2018 vfu_A01840 636789233e32c61b14af713073be573c 182 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01840 636789233e32c61b14af713073be573c 182 SUPERFAMILY SSF52540 22 180 3.61E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01265 a7d6c90fb1dcf751bfebb6ca01e65394 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 2.7E-16 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 vfu_A01265 a7d6c90fb1dcf751bfebb6ca01e65394 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 2.3E-17 T 12-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 Pfam PF02080 TrkA-C domain 209 278 1.3E-12 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 Pfam PF02080 TrkA-C domain 293 349 2.7E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 Gene3D G3DSA:3.30.70.1450 206 285 1.7E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 Gene3D G3DSA:3.30.70.1450 289 361 6.1E-12 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 SUPERFAMILY SSF116726 290 349 2.09E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 Pfam PF03600 Citrate transporter 21 518 6.1E-27 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 vfu_A00704 b3f178e8ac9e85614a5b01b00d27a5a2 574 SUPERFAMILY SSF116726 206 283 1.57E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A01331 f8b904c65b17479eeda4224f2fbcdf61 353 Gene3D G3DSA:3.40.1750.20 206 270 3.5E-43 T 12-10-2018 vfu_A01331 f8b904c65b17479eeda4224f2fbcdf61 353 Pfam PF01343 Peptidase family S49 165 313 4.4E-46 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 vfu_A01331 f8b904c65b17479eeda4224f2fbcdf61 353 SUPERFAMILY SSF52096 103 303 1.94E-28 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A01331 f8b904c65b17479eeda4224f2fbcdf61 353 Gene3D G3DSA:3.90.226.10 109 305 3.5E-43 T 12-10-2018 vfu_A01331 f8b904c65b17479eeda4224f2fbcdf61 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.7E-56 T 12-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 Gene3D G3DSA:2.30.30.790 2 117 2.2E-17 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 SUPERFAMILY SSF50104 2 115 4.21E-48 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 Pfam PF01245 Ribosomal protein L19 3 113 4.8E-51 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.204 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 2.8E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PIRSF PIRSF002191 1 117 7.7E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 8.7E-42 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 8.7E-42 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 8.7E-42 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02957 1de4a4004227e20ab86b3fbaa1c7a0d2 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 SUPERFAMILY SSF54523 5 81 1.96E-13 T 12-10-2018 vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 24 7.3E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 Gene3D G3DSA:3.30.700.10 5 150 9.2E-10 T 12-10-2018 vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 PIRSF PIRSF024622 1 169 1.7E-61 T 12-10-2018 IPR016824 Tfp pilus assembly protein FimT vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.8E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A02725 a11f0bd5ab7d265387fc65b328da995e 169 Pfam PF12019 Type II transport protein GspH 41 145 1.0E-10 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 SUPERFAMILY SSF52172 2 122 1.15E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 SMART SM00448 1 112 4.4E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.7E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 SUPERFAMILY SSF46894 125 220 2.1E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 Pfam PF00072 Response regulator receiver domain 4 112 1.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 Gene3D G3DSA:1.10.10.10 122 223 2.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 Gene3D G3DSA:3.40.50.2300 1 121 7.6E-34 T 12-10-2018 vfu_A02024 cc66c07380f9c8df6195064048077cb3 223 SMART SM00862 146 221 1.4E-16 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 3.5E-64 T 12-10-2018 IPR000241 Putative RNA methylase domain vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.30.2130.30 6 255 2.5E-138 T 12-10-2018 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.643 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 SUPERFAMILY SSF53335 399 706 3.29E-68 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.40.50.150 488 706 1.2E-73 T 12-10-2018 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Pfam PF02926 THUMP domain 31 153 3.3E-12 T 12-10-2018 IPR004114 THUMP domain GO:0003723 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 SMART SM00981 56 154 4.0E-19 T 12-10-2018 IPR004114 THUMP domain GO:0003723 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 443 668 2.5E-25 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 PIRSF PIRSF037618 1 707 3.7E-298 T 12-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 12-10-2018 IPR000241 Putative RNA methylase domain vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.40.50.150 169 371 2.5E-138 T 12-10-2018 vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 SUPERFAMILY SSF53335 139 371 2.27E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01927 f598dfc2c1ad40dca1a0cb62784e5102 707 Gene3D G3DSA:3.30.750.80 396 487 1.9E-35 T 12-10-2018 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 SUPERFAMILY SSF54211 80 159 5.82E-27 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00684 07f666fc8525603df8073a47f18b908e 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 12-10-2018 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 2.0E-69 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 12-10-2018 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 4.0E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.61 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site vfu_A00684 07f666fc8525603df8073a47f18b908e 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 vfu_A00684 07f666fc8525603df8073a47f18b908e 167 Gene3D G3DSA:3.30.230.10 75 167 8.8E-37 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_B00960 5e52a8f466aa85fe9a874025eb07eca4 218 Gene3D G3DSA:3.90.870.10 6 218 2.0E-87 T 12-10-2018 vfu_B00960 5e52a8f466aa85fe9a874025eb07eca4 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 209 3.3E-79 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_B00960 5e52a8f466aa85fe9a874025eb07eca4 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 3.1E-78 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_B00960 5e52a8f466aa85fe9a874025eb07eca4 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 42.845 T 12-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_B00960 5e52a8f466aa85fe9a874025eb07eca4 218 SUPERFAMILY SSF55821 10 213 2.11E-83 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily vfu_A02485 795f892b69417d677420b9af5aabeefb 94 Pfam PF07023 Protein of unknown function (DUF1315) 5 83 2.5E-27 T 12-10-2018 IPR009749 Protein of unknown function DUF1315 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 Pfam PF00155 Aminotransferase class I and II 27 393 2.5E-78 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 Gene3D G3DSA:3.90.1150.10 5 394 7.4E-154 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 Gene3D G3DSA:3.40.640.10 60 302 7.4E-154 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 SUPERFAMILY SSF53383 2 392 3.91E-112 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 5.1E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 5.1E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 275 300 5.1E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A01282 e0cbf92f6c4c8f0a9c6c9a08692d8107 397 PRINTS PR00799 Aspartate aminotransferase signature 343 361 5.1E-35 T 12-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 SUPERFAMILY SSF109604 185 404 2.07E-41 T 12-10-2018 vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 SUPERFAMILY SSF141868 5 200 9.55E-27 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 Gene3D G3DSA:1.10.3210.10 203 365 3.7E-23 T 12-10-2018 vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 Pfam PF08668 HDOD domain 208 324 3.8E-15 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 PIRSF PIRSF003180 1 408 2.0E-167 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 Gene3D G3DSA:3.20.20.450 2 202 2.0E-17 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 SMART SM00052 6 199 0.004 T 12-10-2018 IPR001633 EAL domain vfu_A00450 b709bcb137abedd47bc03222e407bd4a 408 Pfam PF00563 EAL domain 80 194 2.2E-11 T 12-10-2018 IPR001633 EAL domain vfu_A02346 ac5fae5f1c524aac9b1f66edefdb2278 135 PIRSF PIRSF003230 1 134 2.0E-47 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 vfu_A02346 ac5fae5f1c524aac9b1f66edefdb2278 135 SUPERFAMILY SSF54637 3 126 2.33E-40 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A02346 ac5fae5f1c524aac9b1f66edefdb2278 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 127 1.3E-50 T 12-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 vfu_A02346 ac5fae5f1c524aac9b1f66edefdb2278 135 Pfam PF03061 Thioesterase superfamily 18 103 1.4E-18 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 vfu_A02346 ac5fae5f1c524aac9b1f66edefdb2278 135 Gene3D G3DSA:3.10.129.10 1 133 4.0E-43 T 12-10-2018 vfu_A02346 ac5fae5f1c524aac9b1f66edefdb2278 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 123 7.4E-37 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 vfu_B00507 322a82c8c70ef325d77b5ec3690f65e2 401 Pfam PF07690 Major Facilitator Superfamily 15 354 3.7E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00507 322a82c8c70ef325d77b5ec3690f65e2 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 383 6.2E-62 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 vfu_B00507 322a82c8c70ef325d77b5ec3690f65e2 401 SUPERFAMILY SSF103473 9 390 3.01E-56 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00507 322a82c8c70ef325d77b5ec3690f65e2 401 Gene3D G3DSA:1.20.1720.10 10 385 1.3E-97 T 12-10-2018 vfu_B00975 7155bbc3b4165ee21bd68eafd96da02e 99 SUPERFAMILY SSF52091 7 98 3.92E-17 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B00975 7155bbc3b4165ee21bd68eafd96da02e 99 Pfam PF01740 STAS domain 14 96 2.8E-7 T 12-10-2018 IPR002645 STAS domain vfu_B00975 7155bbc3b4165ee21bd68eafd96da02e 99 Gene3D G3DSA:3.30.750.24 2 99 2.8E-15 T 12-10-2018 IPR036513 STAS domain superfamily vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 2.6E-106 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 12-10-2018 IPR018215 ClpP, Ser active site vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.195 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 SUPERFAMILY SSF52096 23 206 1.56E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 12-10-2018 IPR033135 ClpP, histidine active site vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 Pfam PF00574 Clp protease 25 205 4.7E-88 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 Gene3D G3DSA:3.90.226.10 5 207 6.1E-83 T 12-10-2018 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.4E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.4E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.4E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.4E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02430 0f2d77d9fc392a88a46b83e4fdce11a9 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.4E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 vfu_A02155 24bed37feff8771253061e29ed075752 511 Gene3D G3DSA:1.20.200.10 198 509 1.9E-125 T 12-10-2018 vfu_A02155 24bed37feff8771253061e29ed075752 511 SUPERFAMILY SSF48557 4 509 2.98E-195 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_A02155 24bed37feff8771253061e29ed075752 511 Pfam PF00221 Aromatic amino acid lyase 11 470 1.2E-188 T 12-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 vfu_A02155 24bed37feff8771253061e29ed075752 511 Gene3D G3DSA:1.10.275.10 2 197 8.5E-71 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A02155 24bed37feff8771253061e29ed075752 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 506 5.1E-217 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02155 24bed37feff8771253061e29ed075752 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 12-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 vfu_A02155 24bed37feff8771253061e29ed075752 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.833 T 12-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 vfu_A02265 fd87fb1d14fc28b71ce81a0acfe5ea04 140 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 93 136 2.5E-11 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02265 fd87fb1d14fc28b71ce81a0acfe5ea04 140 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 8 138 9.1E-41 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 vfu_A02265 fd87fb1d14fc28b71ce81a0acfe5ea04 140 Pfam PF00460 Flagella basal body rod protein 9 32 7.5E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A02265 fd87fb1d14fc28b71ce81a0acfe5ea04 140 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A01231 6b4402004a5607a28ceff1bd8997704d 97 PIRSF PIRSF000169 1 97 4.3E-29 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 vfu_A01231 6b4402004a5607a28ceff1bd8997704d 97 SUPERFAMILY SSF81343 2 96 2.01E-19 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01231 6b4402004a5607a28ceff1bd8997704d 97 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 2 95 3.2E-28 T 12-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 vfu_A01231 6b4402004a5607a28ceff1bd8997704d 97 Gene3D G3DSA:1.20.1300.10 1 97 1.2E-22 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_B00641 dff1a3009e4569e915033e77c55eda8f 130 SUPERFAMILY SSF51182 9 128 1.01E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00641 dff1a3009e4569e915033e77c55eda8f 130 Hamap MF_01255 L-ectoine synthase [ectC]. 1 130 38.527 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 vfu_B00641 dff1a3009e4569e915033e77c55eda8f 130 Gene3D G3DSA:2.60.120.10 1 118 3.0E-44 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00641 dff1a3009e4569e915033e77c55eda8f 130 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 120 3.0E-59 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 vfu_B00641 dff1a3009e4569e915033e77c55eda8f 130 Pfam PF06339 Ectoine synthase 1 129 5.8E-59 T 12-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 vfu_A02551 7f072bca143c7417279b991949b42bfa 182 PIRSF PIRSF000232 1 182 2.6E-61 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like vfu_A02551 7f072bca143c7417279b991949b42bfa 182 SUPERFAMILY SSF55469 1 181 6.41E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A02551 7f072bca143c7417279b991949b42bfa 182 Gene3D G3DSA:3.40.109.10 1 182 3.4E-42 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A02551 7f072bca143c7417279b991949b42bfa 182 Pfam PF00881 Nitroreductase family 8 161 1.3E-22 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 vfu_A00726 a5cd2f673bbe632f306b8dd83674f71a 178 PIRSF PIRSF016183 3 177 1.0E-70 T 12-10-2018 IPR006839 Ribosome-associated, YjgA vfu_A00726 a5cd2f673bbe632f306b8dd83674f71a 178 Gene3D G3DSA:1.10.60.30 31 105 1.9E-26 T 12-10-2018 vfu_A00726 a5cd2f673bbe632f306b8dd83674f71a 178 Pfam PF04751 Protein of unknown function (DUF615) 21 171 5.7E-55 T 12-10-2018 IPR006839 Ribosome-associated, YjgA vfu_A00726 a5cd2f673bbe632f306b8dd83674f71a 178 Gene3D G3DSA:1.10.60.30 106 177 1.4E-24 T 12-10-2018 vfu_A00726 a5cd2f673bbe632f306b8dd83674f71a 178 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 11 175 23.264 T 12-10-2018 IPR006839 Ribosome-associated, YjgA vfu_A00726 a5cd2f673bbe632f306b8dd83674f71a 178 SUPERFAMILY SSF158710 33 173 9.94E-52 T 12-10-2018 IPR023153 PSPTO4464-like domain superfamily vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 4.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-19 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0016 T 12-10-2018 vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 SUPERFAMILY SSF51735 1 261 4.87E-54 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 Pfam PF00106 short chain dehydrogenase 6 197 5.8E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00656 2cf7836b478554b698a70060a3f0153d 281 Gene3D G3DSA:3.40.50.720 1 264 1.9E-53 T 12-10-2018 vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 Pfam PF04055 Radical SAM superfamily 62 232 3.0E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 Gene3D G3DSA:1.10.10.920 369 462 1.1E-33 T 12-10-2018 vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 SMART SM00729 57 277 1.2E-52 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 Pfam PF06969 HemN C-terminal domain 368 436 1.8E-11 T 12-10-2018 IPR010723 HemN, C-terminal vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 PIRSF PIRSF000167 8 459 4.5E-172 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 Gene3D G3DSA:3.80.30.20 7 368 1.0E-136 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 SUPERFAMILY SSF102114 11 449 9.29E-144 T 12-10-2018 vfu_A00429 9df9712139edccfbe01155a0fa58a1f3 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 3.9E-205 T 12-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 vfu_B01014 c7f40526967785d54d05312bcc2d3c41 128 Gene3D G3DSA:1.20.120.550 1 125 9.6E-26 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily vfu_B01014 c7f40526967785d54d05312bcc2d3c41 128 Pfam PF01124 MAPEG family 3 119 1.0E-22 T 12-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein vfu_B01014 c7f40526967785d54d05312bcc2d3c41 128 SUPERFAMILY SSF161084 2 124 9.81E-29 T 12-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily vfu_A00990 1b68ff602220c9ef806340d99ebe8875 336 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 10 333 45.709 T 12-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A00990 1b68ff602220c9ef806340d99ebe8875 336 SUPERFAMILY SSF51445 9 288 1.79E-86 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A00990 1b68ff602220c9ef806340d99ebe8875 336 Gene3D G3DSA:3.20.20.300 8 336 4.1E-131 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 vfu_A00990 1b68ff602220c9ef806340d99ebe8875 336 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 235 252 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 vfu_A00990 1b68ff602220c9ef806340d99ebe8875 336 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 18 290 2.5E-83 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Gene3D G3DSA:1.20.20.10 1 78 1.0E-27 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 4.7E-11 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 1.8E-27 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 SUPERFAMILY SSF81333 2 76 9.29E-17 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.56 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B01331 9e8ee897dd6a7933ea007d1bfa0d2df3 78 Pfam PF00137 ATP synthase subunit C 11 73 9.3E-9 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 4.0E-112 T 12-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Gene3D G3DSA:2.40.110.10 177 300 6.4E-89 T 12-10-2018 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 3.1E-14 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Gene3D G3DSA:1.10.540.10 63 176 6.4E-89 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Gene3D G3DSA:1.20.140.10 301 446 6.4E-89 T 12-10-2018 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 5.9E-9 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 SUPERFAMILY SSF47203 301 453 1.61E-20 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 2.0E-9 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 vfu_A02313 737e019d81b475eea848765dbfe52e53 760 SUPERFAMILY SSF56645 61 296 1.7E-45 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 vfu_A01902 84c765ae8894dce4ec889be76a197f8c 57 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 50 2.1E-17 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type vfu_A01902 84c765ae8894dce4ec889be76a197f8c 57 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.7E-21 T 12-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type vfu_A00831 7050ab043fa1b9f3afdbe8ffd85afd66 213 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 102 9.5E-34 T 12-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 vfu_A00831 7050ab043fa1b9f3afdbe8ffd85afd66 213 SUPERFAMILY SSF89069 8 71 3.14E-20 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 vfu_A00831 7050ab043fa1b9f3afdbe8ffd85afd66 213 Gene3D G3DSA:1.10.10.880 6 71 2.3E-22 T 12-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 vfu_A00831 7050ab043fa1b9f3afdbe8ffd85afd66 213 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 144 196 5.0E-21 T 12-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal vfu_A00831 7050ab043fa1b9f3afdbe8ffd85afd66 213 PIRSF PIRSF016938 3 205 6.7E-33 T 12-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 Gene3D G3DSA:3.20.20.80 83 517 1.3E-145 T 12-10-2018 vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 1 603 7.0E-197 T 12-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 SMART SM00642 104 506 8.3E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 SUPERFAMILY SSF51011 523 615 6.83E-15 T 12-10-2018 vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 Gene3D G3DSA:2.60.40.1180 522 616 6.0E-7 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 Gene3D G3DSA:2.60.40.10 1 82 2.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 Pfam PF00128 Alpha amylase, catalytic domain 166 216 1.7E-5 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 SUPERFAMILY SSF81296 1 91 1.05E-9 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_B01040 b7cd47a1c6f8ad2290006774bf02eee8 631 SUPERFAMILY SSF51445 79 509 2.91E-103 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A02978 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Gene3D G3DSA:1.10.10.10 56 100 1.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02978 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Pfam PF02631 RecX family 35 149 6.7E-30 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 vfu_A02978 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Gene3D G3DSA:1.10.10.10 102 151 1.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02978 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Gene3D G3DSA:1.10.10.10 9 54 2.4E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02978 3f8771ec22d6e36debdc84bfe9a0f1f0 156 Hamap MF_01114 Regulatory protein RecX [recX]. 1 154 14.149 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 vfu_A01270 38815f865832235d549ff616f5a98f6f 407 Gene3D G3DSA:1.25.40.10 157 296 2.9E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01270 38815f865832235d549ff616f5a98f6f 407 SUPERFAMILY SSF48452 164 270 8.22E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01270 38815f865832235d549ff616f5a98f6f 407 Pfam PF14559 Tetratricopeptide repeat 179 247 3.2E-8 T 12-10-2018 vfu_A01270 38815f865832235d549ff616f5a98f6f 407 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 1.4E-31 T 12-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI vfu_A01854 0b9907808cf91363ba015404290a1d38 279 SUPERFAMILY SSF52151 4 233 2.62E-36 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase vfu_A01854 0b9907808cf91363ba015404290a1d38 279 Pfam PF01734 Patatin-like phospholipase 7 171 5.7E-13 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 vfu_A01854 0b9907808cf91363ba015404290a1d38 279 Gene3D G3DSA:3.40.1090.10 83 206 1.2E-10 T 12-10-2018 vfu_A01854 0b9907808cf91363ba015404290a1d38 279 Gene3D G3DSA:3.40.1090.10 2 82 7.1E-8 T 12-10-2018 vfu_B01282 46a7b29894bd2b708dae75c807475f6d 260 SUPERFAMILY SSF52540 5 231 5.33E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01282 46a7b29894bd2b708dae75c807475f6d 260 SMART SM00382 30 219 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01282 46a7b29894bd2b708dae75c807475f6d 260 Pfam PF00005 ABC transporter 21 170 4.2E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01282 46a7b29894bd2b708dae75c807475f6d 260 Gene3D G3DSA:3.40.50.300 2 258 4.2E-65 T 12-10-2018 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 PRINTS PR00723 Subtilisin serine protease family (S8) signature 139 158 3.2E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 PRINTS PR00723 Subtilisin serine protease family (S8) signature 178 191 3.2E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 PRINTS PR00723 Subtilisin serine protease family (S8) signature 337 353 3.2E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 Gene3D G3DSA:3.40.50.200 111 363 1.0E-65 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 Pfam PF00082 Subtilase family 146 352 5.8E-34 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 182 192 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 SUPERFAMILY SSF54897 31 101 4.7E-11 T 12-10-2018 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 SUPERFAMILY SSF52743 124 351 8.51E-58 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 Gene3D G3DSA:3.30.70.80 30 102 6.5E-15 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 Pfam PF05922 Peptidase inhibitor I9 32 101 2.5E-4 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 vfu_A02437 8f0a9275e2bf626e20c10eae483895ed 377 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 338 348 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site vfu_B01289 f52598ee2a298d6ad131811927044097 167 Gene3D G3DSA:3.40.1570.10 1 167 1.6E-62 T 12-10-2018 vfu_B01289 f52598ee2a298d6ad131811927044097 167 Pfam PF06228 Haem utilisation ChuX/HutX 24 160 6.5E-35 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like vfu_B01289 f52598ee2a298d6ad131811927044097 167 PIRSF PIRSF030840 1 167 6.6E-61 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like vfu_B01289 f52598ee2a298d6ad131811927044097 167 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 8 160 1.3E-63 T 12-10-2018 IPR010413 Heme utilization carrier protein HutX-like vfu_B01289 f52598ee2a298d6ad131811927044097 167 SUPERFAMILY SSF144064 1 164 7.72E-58 T 12-10-2018 vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 Gene3D G3DSA:3.40.50.720 3 274 4.8E-143 T 12-10-2018 vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 2.7E-6 T 12-10-2018 vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 2.7E-6 T 12-10-2018 vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 2.7E-6 T 12-10-2018 vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 SUPERFAMILY SSF51735 3 335 7.25E-96 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.5E-59 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 334 3.1E-141 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 vfu_A01168 8ceb6902fcb5020b393086383920c4f3 338 Gene3D G3DSA:3.90.25.10 194 329 4.8E-143 T 12-10-2018 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 2 299 6.1E-106 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 SUPERFAMILY SSF50677 2 111 9.81E-31 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 SUPERFAMILY SSF52374 110 299 1.09E-49 T 12-10-2018 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 Gene3D G3DSA:3.90.740.10 1 100 3.5E-26 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 Gene3D G3DSA:3.40.50.620 101 293 1.5E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 PRINTS PR00986 Valyl-tRNA synthetase signature 215 236 5.7E-21 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 PRINTS PR00986 Valyl-tRNA synthetase signature 246 264 5.7E-21 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 vfu_A00758 3df253d1eb299dcac4c8a4af6fb8bdc1 299 PRINTS PR00986 Valyl-tRNA synthetase signature 115 128 5.7E-21 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 vfu_A00046 c09e861126e7480286c8ca44fcfe3794 307 SUPERFAMILY SSF52540 3 307 2.0E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00046 c09e861126e7480286c8ca44fcfe3794 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 237 7.4E-14 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 vfu_A00046 c09e861126e7480286c8ca44fcfe3794 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 179.24 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 vfu_A00046 c09e861126e7480286c8ca44fcfe3794 307 Gene3D G3DSA:3.40.50.300 1 307 3.4E-92 T 12-10-2018 vfu_A00046 c09e861126e7480286c8ca44fcfe3794 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 5.5E-148 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 vfu_A00046 c09e861126e7480286c8ca44fcfe3794 307 PIRSF PIRSF000545 1 307 8.5E-146 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 vfu_B01050 765db4264a5a086c5d6b5e91bd6b80e7 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 8 407 5.1E-134 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 vfu_B01050 765db4264a5a086c5d6b5e91bd6b80e7 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 24.038 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 vfu_B01050 765db4264a5a086c5d6b5e91bd6b80e7 408 Pfam PF03616 Sodium/glutamate symporter 6 376 7.2E-152 T 12-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 vfu_A00895 0e69553304eb45442291c1e32cee3a0a 251 Gene3D G3DSA:2.40.50.580 1 80 4.1E-29 T 12-10-2018 vfu_A00895 0e69553304eb45442291c1e32cee3a0a 251 Pfam PF03749 Sugar fermentation stimulation protein 13 237 4.5E-74 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein vfu_A00895 0e69553304eb45442291c1e32cee3a0a 251 Gene3D G3DSA:3.40.1350.60 81 245 4.3E-54 T 12-10-2018 vfu_A00895 0e69553304eb45442291c1e32cee3a0a 251 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 246 55.765 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein vfu_A00895 0e69553304eb45442291c1e32cee3a0a 251 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 233 7.3E-76 T 12-10-2018 IPR005224 Sugar fermentation stimulation protein vfu_B00880 5a668b42b78d3ab519b8059d0921f56f 313 Gene3D G3DSA:3.30.360.10 119 312 3.3E-53 T 12-10-2018 vfu_B00880 5a668b42b78d3ab519b8059d0921f56f 313 SUPERFAMILY SSF51735 1 165 3.95E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00880 5a668b42b78d3ab519b8059d0921f56f 313 Gene3D G3DSA:3.40.50.720 1 118 1.4E-27 T 12-10-2018 vfu_B00880 5a668b42b78d3ab519b8059d0921f56f 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 119 2.7E-16 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 vfu_B00880 5a668b42b78d3ab519b8059d0921f56f 313 SUPERFAMILY SSF55347 121 264 7.52E-45 T 12-10-2018 vfu_A01549 bafec7067ff3d7ebe598667d6f948151 183 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 2.3E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A01549 bafec7067ff3d7ebe598667d6f948151 183 SUPERFAMILY SSF54523 7 129 6.98E-17 T 12-10-2018 vfu_A01549 bafec7067ff3d7ebe598667d6f948151 183 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.5E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A01549 bafec7067ff3d7ebe598667d6f948151 183 Gene3D G3DSA:3.30.700.10 7 180 4.1E-14 T 12-10-2018 vfu_A01816 00714f21528699dad74068b976e54804 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 8 864 0.0 T 12-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 vfu_A01816 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.30.499.20 10 365 4.6E-130 T 12-10-2018 vfu_A01816 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.20.19.10 625 863 1.7E-82 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 SUPERFAMILY SSF52016 604 862 2.94E-68 T 12-10-2018 vfu_A01816 00714f21528699dad74068b976e54804 865 SUPERFAMILY SSF53732 12 599 9.29E-186 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 211 226 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 366 380 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 470 483 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 408 419 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 168 176 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 144 157 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 197 210 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 287 300 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 PRINTS PR00415 Aconitase family signature 273 286 1.2E-25 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:1.10.1440.20 568 624 8.3E-10 T 12-10-2018 vfu_A01816 00714f21528699dad74068b976e54804 865 Gene3D G3DSA:3.30.499.10 366 567 3.3E-77 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 Pfam PF00694 Aconitase C-terminal domain 662 793 7.3E-31 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 Pfam PF00330 Aconitase family (aconitate hydratase) 76 539 1.3E-144 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 vfu_A01816 00714f21528699dad74068b976e54804 865 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 37 861 1.7E-288 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 5.5E-26 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF51735 463 636 6.47E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF55347 614 797 3.33E-50 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF55021 383 476 1.14E-19 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.30.360.10 625 795 2.7E-118 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.30.2130.10 302 464 6.9E-44 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF00696 Amino acid kinase family 2 284 1.4E-49 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 PIRSF PIRSF000727 1 817 0.0 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF55021 303 381 1.03E-20 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF01842 ACT domain 324 380 2.9E-7 T 12-10-2018 IPR002912 ACT domain vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.40.50.720 467 811 2.7E-118 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 3.5E-129 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:3.40.1160.10 3 295 6.1E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF00742 Homoserine dehydrogenase 614 810 6.7E-47 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Pfam PF13840 ACT domain 394 456 3.7E-7 T 12-10-2018 IPR027795 CASTOR, ACT domain vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 Gene3D G3DSA:1.20.120.1320 41 142 6.1E-87 T 12-10-2018 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02897 9fc6e38efdf8ada025c6494168e1b0ca 819 SUPERFAMILY SSF53633 1 298 3.14E-75 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A02864 ccfc02fe1bf6eff3e129fee920798854 162 Pfam PF01478 Type IV leader peptidase family 3 101 1.5E-8 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 vfu_A02759 b883dc6be4083b91a9f9a5af31122fda 540 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 27 333 5.3E-75 T 12-10-2018 IPR014150 Conjugal transfer, TrbL vfu_A02759 b883dc6be4083b91a9f9a5af31122fda 540 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 61 267 6.5E-34 T 12-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.046 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 1.8E-107 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 2.8E-141 T 12-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 Gene3D G3DSA:3.30.230.20 1 128 1.6E-51 T 12-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 SUPERFAMILY SSF54211 134 278 4.55E-52 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 SUPERFAMILY SSF54211 3 125 3.11E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02927 43ba05f7bfa42882d309a7070c47e2d4 305 Gene3D G3DSA:3.30.1700.10 129 305 5.5E-70 T 12-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 Gene3D G3DSA:3.20.80.10 132 286 8.1E-35 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 Pfam PF06445 GyrI-like small molecule binding domain 134 286 7.0E-30 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 61 104 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 Gene3D G3DSA:1.10.10.60 62 124 4.4E-12 T 12-10-2018 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 Gene3D G3DSA:1.10.10.60 3 61 6.3E-15 T 12-10-2018 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 SMART SM00342 24 108 1.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 Pfam PF12833 Helix-turn-helix domain 30 109 8.4E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 SUPERFAMILY SSF46689 7 57 7.62E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 SUPERFAMILY SSF55136 133 286 2.88E-33 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 SUPERFAMILY SSF46689 61 119 2.06E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01350 641d38f57048427eec22630b53f0e3bb 286 SMART SM00871 132 286 7.3E-37 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding vfu_A00781 c2914f749ee18d4d0641d05da0fd03c9 341 Gene3D G3DSA:1.10.443.10 151 335 1.5E-28 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A00781 c2914f749ee18d4d0641d05da0fd03c9 341 Gene3D G3DSA:1.10.150.130 47 150 6.3E-15 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A00781 c2914f749ee18d4d0641d05da0fd03c9 341 Pfam PF13102 Phage integrase SAM-like domain 55 143 4.8E-5 T 12-10-2018 IPR025269 Phage integrase SAM-like domain vfu_A00781 c2914f749ee18d4d0641d05da0fd03c9 341 Pfam PF00589 Phage integrase family 154 316 2.6E-22 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A00781 c2914f749ee18d4d0641d05da0fd03c9 341 SUPERFAMILY SSF56349 52 326 4.91E-49 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A02838 ad1126b4caacaf9d72b04580b73a2deb 96 Gene3D G3DSA:1.10.10.710 21 91 5.5E-8 T 12-10-2018 IPR038627 YebG-like superfamily vfu_A02838 ad1126b4caacaf9d72b04580b73a2deb 96 Pfam PF07130 YebG protein 1 72 1.5E-31 T 12-10-2018 IPR009813 Uncharacterised protein family YebG vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 Gene3D G3DSA:3.40.630.10 16 362 3.7E-113 T 12-10-2018 vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 SUPERFAMILY SSF55031 177 289 6.8E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 Pfam PF07687 Peptidase dimerisation domain 180 273 1.5E-14 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 SUPERFAMILY SSF53187 7 366 5.76E-57 T 12-10-2018 vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 PIRSF PIRSF001123 225 368 1.1E-4 T 12-10-2018 IPR008007 Peptidase M42 vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 PIRSF PIRSF001123 97 181 3.7E-5 T 12-10-2018 IPR008007 Peptidase M42 vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 PIRSF PIRSF001123 6 105 0.54 T 12-10-2018 IPR008007 Peptidase M42 vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 Gene3D G3DSA:3.30.70.360 176 287 3.7E-113 T 12-10-2018 vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 362 3.0E-158 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like vfu_A01825 bd5de635a0b05f2dbcb938c31defa87e 370 Pfam PF01546 Peptidase family M20/M25/M40 73 366 1.2E-18 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_A02391 53c23d4314a84711308a51c9733ed18b 414 Pfam PF12704 MacB-like periplasmic core domain 30 240 1.5E-12 T 12-10-2018 IPR025857 MacB-like periplasmic core domain vfu_A02391 53c23d4314a84711308a51c9733ed18b 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 5.9E-156 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 vfu_A02391 53c23d4314a84711308a51c9733ed18b 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 9.2E-208 T 12-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 vfu_A02391 53c23d4314a84711308a51c9733ed18b 414 Pfam PF02687 FtsX-like permease family 301 407 2.1E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 vfu_A02215 66a252dff7c41ed58e9592916d57635c 287 Pfam PF01380 SIS domain 124 250 2.0E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A02215 66a252dff7c41ed58e9592916d57635c 287 Gene3D G3DSA:3.40.50.10490 94 273 3.4E-38 T 12-10-2018 vfu_A02215 66a252dff7c41ed58e9592916d57635c 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 6.7E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 vfu_A02215 66a252dff7c41ed58e9592916d57635c 287 SUPERFAMILY SSF46689 5 79 3.94E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02215 66a252dff7c41ed58e9592916d57635c 287 SUPERFAMILY SSF53697 97 260 9.91E-35 T 12-10-2018 vfu_A02215 66a252dff7c41ed58e9592916d57635c 287 Gene3D G3DSA:1.10.10.10 3 82 1.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00890 b6f767de14efc8821603f5db3351a7d4 264 SUPERFAMILY SSF51621 3 262 3.65E-106 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A00890 b6f767de14efc8821603f5db3351a7d4 264 PIRSF PIRSF000388 1 264 2.3E-102 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 vfu_A00890 b6f767de14efc8821603f5db3351a7d4 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 1.1E-108 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 vfu_A00890 b6f767de14efc8821603f5db3351a7d4 264 Gene3D G3DSA:3.20.20.60 1 263 4.7E-107 T 12-10-2018 vfu_A00890 b6f767de14efc8821603f5db3351a7d4 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 3.4E-113 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 vfu_A00890 b6f767de14efc8821603f5db3351a7d4 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.772 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 20 39 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 121 142 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 97 109 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 PRINTS PR01549 Autoinducer synthesis protein signature 143 164 6.8E-34 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 SUPERFAMILY SSF55729 9 188 2.49E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 Gene3D G3DSA:3.40.630.30 7 193 5.6E-53 T 12-10-2018 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 Pfam PF00765 Autoinducer synthase 20 189 2.0E-29 T 12-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_B01267 6805a7e0243b60bf822b4c38717951a6 193 ProSitePatterns PS00949 Autoinducer synthase family signature. 24 49 - T 12-10-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 vfu_A01247 f21850adcc70fbc919861c4aa733a809 197 Gene3D G3DSA:3.10.180.10 6 197 1.6E-60 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01247 f21850adcc70fbc919861c4aa733a809 197 Pfam PF06185 YecM protein 14 196 1.3E-66 T 12-10-2018 IPR010393 Protein of unknown function DUF991 vfu_A01247 f21850adcc70fbc919861c4aa733a809 197 SUPERFAMILY SSF54593 2 196 6.19E-63 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A00420 b5b633e92efc2e7b2958cbed0f8529f0 253 SUPERFAMILY SSF51556 1 253 2.16E-77 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A00420 b5b633e92efc2e7b2958cbed0f8529f0 253 Gene3D G3DSA:3.20.20.140 1 253 7.3E-78 T 12-10-2018 vfu_A00420 b5b633e92efc2e7b2958cbed0f8529f0 253 Pfam PF01026 TatD related DNase 2 252 1.2E-63 T 12-10-2018 IPR001130 TatD family GO:0016788 vfu_A00420 b5b633e92efc2e7b2958cbed0f8529f0 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 1.3E-69 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 vfu_A00420 b5b633e92efc2e7b2958cbed0f8529f0 253 PIRSF PIRSF005902 1 253 1.8E-67 T 12-10-2018 IPR001130 TatD family GO:0016788 vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 718 1.3E-96 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 SUPERFAMILY SSF56935 28 718 5.63E-118 T 12-10-2018 vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 174 4.3E-11 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 Pfam PF00593 TonB dependent receptor 260 717 1.7E-49 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 Gene3D G3DSA:2.170.130.10 53 181 1.0E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 46 - T 12-10-2018 IPR010916 TonB box, conserved site vfu_B01405 21470b98d007606c2971ca3dfc383e96 719 Gene3D G3DSA:2.40.170.20 182 718 2.7E-142 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A00823 a9652c68554c410863c1f89c61d48561 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-28 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 vfu_A00823 a9652c68554c410863c1f89c61d48561 68 Gene3D G3DSA:3.30.1910.10 1 63 4.6E-30 T 12-10-2018 vfu_A00823 a9652c68554c410863c1f89c61d48561 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 3.8E-29 T 12-10-2018 IPR009491 Protein of unknown function DUF1107 vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 Gene3D G3DSA:3.40.50.720 3 353 7.2E-135 T 12-10-2018 vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 SUPERFAMILY SSF52283 1 360 1.11E-67 T 12-10-2018 vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 SMART SM01003 4 137 4.8E-79 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 SMART SM01002 149 297 6.5E-87 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 PIRSF PIRSF000183 1 371 6.7E-154 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.4E-152 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 8.6E-46 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 Gene3D G3DSA:3.40.50.720 130 305 7.2E-135 T 12-10-2018 vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 1.7E-81 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain vfu_A02413 a044a60aed33fa6d08e1c5e51268e185 374 SUPERFAMILY SSF51735 137 303 1.6E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02248 325e7e78b57253de08c82b8073e0113f 91 SUPERFAMILY SSF101498 1 89 6.54E-6 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily vfu_A02248 325e7e78b57253de08c82b8073e0113f 91 Pfam PF04316 Anti-sigma-28 factor, FlgM 35 88 3.0E-8 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal vfu_A00737 d73aee9f746e4266447384432ebe89cf 185 SUPERFAMILY SSF56784 21 178 7.75E-40 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A00737 d73aee9f746e4266447384432ebe89cf 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.6E-62 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A00737 d73aee9f746e4266447384432ebe89cf 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 1.3E-13 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 vfu_A00737 d73aee9f746e4266447384432ebe89cf 185 Gene3D G3DSA:3.40.50.1000 1 185 1.1E-57 T 12-10-2018 IPR023214 HAD superfamily vfu_A00737 d73aee9f746e4266447384432ebe89cf 185 PIRSF PIRSF006118 10 185 1.5E-73 T 12-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A00737 d73aee9f746e4266447384432ebe89cf 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 1.3E-8 T 12-10-2018 vfu_A02088 7f505c49ec1a63816536934165224e8c 421 SUPERFAMILY SSF56935 22 421 8.7E-106 T 12-10-2018 vfu_A02088 7f505c49ec1a63816536934165224e8c 421 Gene3D G3DSA:2.40.170.10 22 421 2.2E-116 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 vfu_A02088 7f505c49ec1a63816536934165224e8c 421 Pfam PF02264 LamB porin 24 421 2.6E-111 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_A02088 7f505c49ec1a63816536934165224e8c 421 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 46 416 1.0E-100 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_A00598 542801d07079bb0880e4f66ce0633298 145 Pfam PF05656 Protein of unknown function (DUF805) 8 142 1.3E-20 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 vfu_B00493 568ddc92e200eca0840b16ec5c868ede 253 SUPERFAMILY SSF52540 2 225 3.9E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00493 568ddc92e200eca0840b16ec5c868ede 253 Gene3D G3DSA:3.40.50.300 1 250 1.1E-61 T 12-10-2018 vfu_B00493 568ddc92e200eca0840b16ec5c868ede 253 Pfam PF00005 ABC transporter 18 164 8.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00493 568ddc92e200eca0840b16ec5c868ede 253 SMART SM00382 26 213 1.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00493 568ddc92e200eca0840b16ec5c868ede 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00537 dbee9bf9787557ce1c0589827139aa58 406 SUPERFAMILY SSF48208 15 397 4.02E-92 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 vfu_B00537 dbee9bf9787557ce1c0589827139aa58 406 Hamap MF_00929 Cellobiose 2-epimerase. 6 394 40.067 T 12-10-2018 IPR028584 Cellobiose 2-epimerase GO:0047736 MetaCyc: PWY-7456 vfu_B00537 dbee9bf9787557ce1c0589827139aa58 406 Gene3D G3DSA:1.50.10.10 1 395 1.1E-136 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 vfu_B00537 dbee9bf9787557ce1c0589827139aa58 406 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 31 372 2.9E-40 T 12-10-2018 vfu_A01907 ffd78bf39bd46cb741016092a436fb95 206 Gene3D G3DSA:1.10.760.10 46 206 1.2E-72 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01907 ffd78bf39bd46cb741016092a436fb95 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 8.4E-82 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO vfu_A01907 ffd78bf39bd46cb741016092a436fb95 206 SUPERFAMILY SSF46626 21 201 4.72E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01907 ffd78bf39bd46cb741016092a436fb95 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 6.2E-82 T 12-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO vfu_B00993 0e4fab97e5277510480d6c5ddc6c7e5f 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 1.1E-32 T 12-10-2018 IPR021700 Protein of unknown function DUF3283 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 SUPERFAMILY SSF51395 2 375 9.16E-91 T 12-10-2018 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 389 610 8.9E-29 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 Gene3D G3DSA:3.40.50.720 390 642 1.2E-55 T 12-10-2018 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 Gene3D G3DSA:3.50.50.60 485 604 1.2E-55 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 Gene3D G3DSA:3.20.20.70 1 383 1.8E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 342 1.3E-62 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 473 491 3.6E-16 T 12-10-2018 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 512 530 3.6E-16 T 12-10-2018 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 391 410 3.6E-16 T 12-10-2018 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 508 532 1.1E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 565 581 1.1E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 390 412 1.1E-11 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A01603 c5d2f9533bd80f34b1f6a32542f59e71 648 SUPERFAMILY SSF51905 371 648 6.15E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00708 228b55fdd98e92f152952cc0955fd3bc 164 Gene3D G3DSA:2.40.50.870 23 164 6.6E-47 T 12-10-2018 vfu_A00708 228b55fdd98e92f152952cc0955fd3bc 164 Pfam PF11736 Protein of unknown function (DUF3299) 29 159 2.8E-44 T 12-10-2018 IPR021727 Protein of unknown function DUF3299 vfu_A01547 a21fdaaf95de1f0cba924a23a4ee3b37 486 SUPERFAMILY SSF55073 337 486 6.67E-35 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01547 a21fdaaf95de1f0cba924a23a4ee3b37 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 482 1.5E-35 T 12-10-2018 IPR000160 GGDEF domain vfu_A01547 a21fdaaf95de1f0cba924a23a4ee3b37 486 SMART SM00267 320 486 4.8E-38 T 12-10-2018 IPR000160 GGDEF domain vfu_A01547 a21fdaaf95de1f0cba924a23a4ee3b37 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 484 2.9E-39 T 12-10-2018 IPR000160 GGDEF domain vfu_A01547 a21fdaaf95de1f0cba924a23a4ee3b37 486 Gene3D G3DSA:3.30.70.270 321 486 1.0E-41 T 12-10-2018 vfu_A01547 a21fdaaf95de1f0cba924a23a4ee3b37 486 Gene3D G3DSA:3.30.450.20 144 241 9.1E-6 T 12-10-2018 vfu_A02837 3db20a9146b46d75614366d321860d5c 296 SUPERFAMILY SSF53850 92 294 1.0E-40 T 12-10-2018 vfu_A02837 3db20a9146b46d75614366d321860d5c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02837 3db20a9146b46d75614366d321860d5c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02837 3db20a9146b46d75614366d321860d5c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02837 3db20a9146b46d75614366d321860d5c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02837 3db20a9146b46d75614366d321860d5c 296 Pfam PF03466 LysR substrate binding domain 90 293 1.2E-47 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02837 3db20a9146b46d75614366d321860d5c 296 Gene3D G3DSA:1.10.10.10 4 93 1.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02837 3db20a9146b46d75614366d321860d5c 296 SUPERFAMILY SSF46785 5 113 2.36E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02837 3db20a9146b46d75614366d321860d5c 296 Gene3D G3DSA:3.40.190.290 94 294 2.1E-38 T 12-10-2018 vfu_A01488 94315b52cb3e50a7d6ed807020a6a7a6 231 Gene3D G3DSA:2.60.120.10 11 135 1.0E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01488 94315b52cb3e50a7d6ed807020a6a7a6 231 SUPERFAMILY SSF51182 1 230 6.62E-70 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A01488 94315b52cb3e50a7d6ed807020a6a7a6 231 Pfam PF02678 Pirin 7 119 1.2E-32 T 12-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 vfu_A01488 94315b52cb3e50a7d6ed807020a6a7a6 231 Gene3D G3DSA:2.60.120.10 7 231 1.0E-82 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A01488 94315b52cb3e50a7d6ed807020a6a7a6 231 PIRSF PIRSF006232 1 229 1.0E-52 T 12-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 Gene3D G3DSA:3.30.420.40 91 389 3.5E-109 T 12-10-2018 vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 Gene3D G3DSA:3.30.420.40 208 379 3.5E-109 T 12-10-2018 vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 Pfam PF00480 ROK family 88 392 2.0E-68 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 SUPERFAMILY SSF53067 86 395 1.83E-55 T 12-10-2018 vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 Gene3D G3DSA:1.10.10.10 2 80 1.6E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 ProSitePatterns PS01125 ROK family signature. 218 245 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A01325 964f67cdb7e8826b775a3086b2423167 407 SUPERFAMILY SSF46785 10 77 1.58E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00368 a18f2728962bee8218d2911e36cd620e 198 Gene3D G3DSA:2.10.109.10 68 196 3.1E-9 T 12-10-2018 vfu_B00368 a18f2728962bee8218d2911e36cd620e 198 Pfam PF00717 Peptidase S24-like 107 178 2.7E-12 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C vfu_B00368 a18f2728962bee8218d2911e36cd620e 198 SUPERFAMILY SSF51306 64 190 2.35E-20 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily vfu_B00368 a18f2728962bee8218d2911e36cd620e 198 ProSitePatterns PS00501 Signal peptidases I serine active site. 110 117 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 vfu_B01413 57fa1036daee71f25158d75451e6b8a9 136 Gene3D G3DSA:2.170.150.70 5 118 2.5E-14 T 12-10-2018 vfu_B01413 57fa1036daee71f25158d75451e6b8a9 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 116 3.9E-20 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 vfu_B01413 57fa1036daee71f25158d75451e6b8a9 136 SUPERFAMILY SSF51316 1 135 3.77E-34 T 12-10-2018 IPR011057 Mss4-like superfamily vfu_A00680 e56bff11fae395313b5a5f96ea4e416d 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00680 e56bff11fae395313b5a5f96ea4e416d 101 SUPERFAMILY SSF57716 2 101 2.0E-36 T 12-10-2018 vfu_A00680 e56bff11fae395313b5a5f96ea4e416d 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.3E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00680 e56bff11fae395313b5a5f96ea4e416d 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.761 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid vfu_A00680 e56bff11fae395313b5a5f96ea4e416d 101 Gene3D G3DSA:4.10.830.10 43 101 5.7E-23 T 12-10-2018 vfu_A02550 f6371efdb8273552a09acd1dc001569b 266 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 37 4.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02550 f6371efdb8273552a09acd1dc001569b 266 SUPERFAMILY SSF46785 4 59 7.56E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02550 f6371efdb8273552a09acd1dc001569b 266 Gene3D G3DSA:1.10.10.10 1 64 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02550 f6371efdb8273552a09acd1dc001569b 266 SUPERFAMILY SSF53850 63 263 7.6E-37 T 12-10-2018 vfu_A02550 f6371efdb8273552a09acd1dc001569b 266 Gene3D G3DSA:3.40.190.290 65 266 6.4E-74 T 12-10-2018 vfu_A02550 f6371efdb8273552a09acd1dc001569b 266 Pfam PF03466 LysR substrate binding domain 63 261 1.4E-39 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 Gene3D G3DSA:3.40.630.10 4 400 2.4E-176 T 12-10-2018 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 405 8.9E-161 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.966 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 SUPERFAMILY SSF55031 209 319 6.28E-36 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 Pfam PF01546 Peptidase family M20/M25/M40 139 402 2.4E-13 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 Gene3D G3DSA:3.30.70.360 209 319 2.4E-176 T 12-10-2018 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 SUPERFAMILY SSF53187 1 405 3.14E-81 T 12-10-2018 vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 Pfam PF07687 Peptidase dimerisation domain 207 308 9.9E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_B00686 5c29b21dbd42798e9b07055c6086e333 411 PIRSF PIRSF037215 1 408 8.3E-184 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 vfu_A00282 328fac8caf022522d02f14a080966af6 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A00282 328fac8caf022522d02f14a080966af6 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 8.5E-173 T 12-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 vfu_A00282 328fac8caf022522d02f14a080966af6 474 Pfam PF12801 4Fe-4S binding domain 98 137 9.6E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A00282 328fac8caf022522d02f14a080966af6 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 2.9E-40 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A00282 328fac8caf022522d02f14a080966af6 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 3.2E-28 T 12-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain vfu_A00282 328fac8caf022522d02f14a080966af6 474 Gene3D G3DSA:2.60.40.10 358 474 4.2E-45 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A00282 328fac8caf022522d02f14a080966af6 474 SUPERFAMILY SSF54862 108 350 1.2E-32 T 12-10-2018 vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 SUPERFAMILY SSF55326 7 158 1.15E-40 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 5.8E-18 T 12-10-2018 IPR016188 PurM-like, N-terminal domain vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 SUPERFAMILY SSF56042 164 339 9.72E-51 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 Gene3D G3DSA:3.90.650.10 164 346 1.1E-53 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 44.653 T 12-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 341 1.4E-27 T 12-10-2018 IPR010918 PurM-like, C-terminal domain vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 Gene3D G3DSA:3.30.1330.10 1 162 3.0E-47 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 PIRSF PIRSF036407 1 345 1.2E-119 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 vfu_A02039 aabc35f0a42390ac6319024d676ed8df 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 7.1E-137 T 12-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 vfu_A02185 62b090680d6bac389d6d9048cc304390 161 Pfam PF16157 Domain of unknown function (DUF4865) 1 104 2.5E-39 T 12-10-2018 IPR032349 Protein of unknown function DUF4865 vfu_A02185 62b090680d6bac389d6d9048cc304390 161 SUPERFAMILY SSF54909 16 87 1.27E-5 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 SMART SM00283 291 552 2.2E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 Gene3D G3DSA:1.10.287.950 221 553 1.6E-69 T 12-10-2018 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 197 217 1.2E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 1.2E-6 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 Gene3D G3DSA:3.30.450.20 30 198 3.6E-36 T 12-10-2018 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 SMART SM00304 222 276 2.3E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 Pfam PF17200 Single Cache domain 2 47 187 1.0E-31 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 SMART SM01049 44 130 2.7E-19 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 SUPERFAMILY SSF58104 244 553 6.93E-75 T 12-10-2018 vfu_B00998 d11208e950070e2a6109c3ea8c8c57bf 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 516 2.3E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01189 488f4df07604ccd4dc551a92ad6185cb 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 79 92 4.2E-13 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01189 488f4df07604ccd4dc551a92ad6185cb 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 58 74 4.2E-13 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01189 488f4df07604ccd4dc551a92ad6185cb 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 23 39 4.2E-13 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01189 488f4df07604ccd4dc551a92ad6185cb 94 Pfam PF02049 Flagellar hook-basal body complex protein FliE 8 94 1.2E-30 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01189 488f4df07604ccd4dc551a92ad6185cb 94 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 94 15.534 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A01189 488f4df07604ccd4dc551a92ad6185cb 94 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 93 1.1E-19 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 Gene3D G3DSA:1.10.10.60 102 152 7.5E-13 T 12-10-2018 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 SMART SM00342 120 204 9.1E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 Pfam PF12833 Helix-turn-helix domain 126 205 8.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 Gene3D G3DSA:1.10.10.60 153 208 7.2E-19 T 12-10-2018 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 157 200 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 SUPERFAMILY SSF46689 106 153 4.93E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 173 188 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 188 204 3.6E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A02866 f6936d666b05513faaa4b02c0065c2fb 209 SUPERFAMILY SSF46689 157 205 4.3E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01330 b6c5986dbbbec152a4752e1285d3e27c 150 Pfam PF00430 ATP synthase B/B' CF(0) 3 130 2.0E-26 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 vfu_B01330 b6c5986dbbbec152a4752e1285d3e27c 150 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 4 150 2.7E-43 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 vfu_B01330 b6c5986dbbbec152a4752e1285d3e27c 150 SUPERFAMILY SSF81573 58 115 2.62E-10 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily vfu_B01330 b6c5986dbbbec152a4752e1285d3e27c 150 Gene3D G3DSA:1.20.5.620 56 116 4.2E-13 T 12-10-2018 vfu_B01330 b6c5986dbbbec152a4752e1285d3e27c 150 Hamap MF_01398 ATP synthase subunit b [atpF]. 3 132 11.074 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 vfu_A00263 440fa2735add173783d7c5205b20fff4 276 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 6.1E-23 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 vfu_A00263 440fa2735add173783d7c5205b20fff4 276 Gene3D G3DSA:3.40.50.720 119 239 9.0E-84 T 12-10-2018 vfu_A00263 440fa2735add173783d7c5205b20fff4 276 SUPERFAMILY SSF51735 106 273 1.28E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00263 440fa2735add173783d7c5205b20fff4 276 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 120 195 1.1E-13 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase vfu_A00263 440fa2735add173783d7c5205b20fff4 276 SUPERFAMILY SSF53223 6 105 1.32E-30 T 12-10-2018 vfu_A00263 440fa2735add173783d7c5205b20fff4 276 Gene3D G3DSA:3.40.50.10860 8 258 9.0E-84 T 12-10-2018 vfu_A00263 440fa2735add173783d7c5205b20fff4 276 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 9.1E-84 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 vfu_A00263 440fa2735add173783d7c5205b20fff4 276 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 30.96 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03150 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.034 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 5.1E-138 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 Gene3D G3DSA:1.10.8.10 16 105 2.6E-6 T 12-10-2018 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 PIRSF PIRSF037167 2 307 4.9E-149 T 12-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 Pfam PF05175 Methyltransferase small domain 134 216 1.3E-17 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 SUPERFAMILY SSF53335 16 293 3.19E-51 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01205 1ca68f0857add3f5e936df356e677207 310 Gene3D G3DSA:3.40.50.150 106 276 3.4E-47 T 12-10-2018 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 69 265 9.8E-60 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 vfu_A01205 1ca68f0857add3f5e936df356e677207 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 302 1.7E-97 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 vfu_A00811 c1587c0b26183998936c1a8a8c6c0d99 348 Pfam PF13528 Glycosyl transferase family 1 2 299 1.3E-36 T 12-10-2018 vfu_A00811 c1587c0b26183998936c1a8a8c6c0d99 348 SUPERFAMILY SSF53756 11 299 2.51E-11 T 12-10-2018 vfu_A00811 c1587c0b26183998936c1a8a8c6c0d99 348 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 3 310 8.5E-108 T 12-10-2018 IPR005262 Conserved hypothetical protein CHP00661 vfu_A02361 1167be723843b505ce4f02a383adf030 691 Gene3D G3DSA:3.40.50.300 25 302 3.2E-40 T 12-10-2018 vfu_A02361 1167be723843b505ce4f02a383adf030 691 SUPERFAMILY SSF52540 48 665 1.88E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02361 1167be723843b505ce4f02a383adf030 691 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.483 T 12-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 vfu_A02361 1167be723843b505ce4f02a383adf030 691 SMART SM00491 535 671 1.3E-26 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 vfu_A02361 1167be723843b505ce4f02a383adf030 691 Pfam PF06733 DEAD_2 192 262 7.7E-7 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 vfu_A02361 1167be723843b505ce4f02a383adf030 691 Gene3D G3DSA:3.40.50.300 498 690 2.4E-33 T 12-10-2018 vfu_A02361 1167be723843b505ce4f02a383adf030 691 Pfam PF13307 Helicase C-terminal domain 526 684 8.5E-36 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 vfu_A02738 44285c2a1e9920b9739cd31f427097ec 310 SUPERFAMILY SSF52980 159 281 5.25E-19 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A02738 44285c2a1e9920b9739cd31f427097ec 310 Pfam PF04471 Restriction endonuclease 157 277 1.1E-33 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 vfu_A02738 44285c2a1e9920b9739cd31f427097ec 310 Gene3D G3DSA:3.40.91.100 132 294 2.6E-12 T 12-10-2018 vfu_A02738 44285c2a1e9920b9739cd31f427097ec 310 Pfam PF14338 Mrr N-terminal domain 6 91 7.7E-17 T 12-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain vfu_A02738 44285c2a1e9920b9739cd31f427097ec 310 Gene3D G3DSA:1.10.10.10 19 97 2.2E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Pfam PF00158 Sigma-54 interaction domain 133 296 2.0E-65 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Gene3D G3DSA:1.10.10.60 404 466 2.2E-9 T 12-10-2018 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Gene3D G3DSA:1.10.8.60 302 380 3.8E-31 T 12-10-2018 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 SMART SM00448 5 116 7.8E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Gene3D G3DSA:3.40.50.2300 2 120 2.5E-33 T 12-10-2018 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Pfam PF00072 Response regulator receiver domain 7 116 6.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Gene3D G3DSA:3.40.50.300 121 301 1.5E-64 T 12-10-2018 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 SUPERFAMILY SSF52540 134 371 1.27E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01188 bb705023860e0f88d99b6244534536ca 469 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 9.3E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 SUPERFAMILY SSF52172 4 174 1.85E-39 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01188 bb705023860e0f88d99b6244534536ca 469 SUPERFAMILY SSF46689 343 460 4.48E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01188 bb705023860e0f88d99b6244534536ca 469 SMART SM00382 150 294 1.0E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01093 c710f5ebb9d131ff5da377d403fb5695 215 Pfam PF03591 AzlC protein 3 141 8.7E-36 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease vfu_B00779 52076379d0b58626ffa5a08cd2ceb9d8 267 Pfam PF00069 Protein kinase domain 49 170 2.1E-7 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 vfu_B00779 52076379d0b58626ffa5a08cd2ceb9d8 267 SUPERFAMILY SSF56112 1 165 1.24E-15 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_B00779 52076379d0b58626ffa5a08cd2ceb9d8 267 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 126 138 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 vfu_B00779 52076379d0b58626ffa5a08cd2ceb9d8 267 Gene3D G3DSA:1.10.510.10 89 198 8.8E-13 T 12-10-2018 vfu_B00779 52076379d0b58626ffa5a08cd2ceb9d8 267 Gene3D G3DSA:3.30.200.20 45 88 8.8E-13 T 12-10-2018 vfu_A02916 1d2986876f4c2b0cb3d9575b503b01bb 185 SUPERFAMILY SSF52218 1 183 1.44E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A02916 1d2986876f4c2b0cb3d9575b503b01bb 185 Pfam PF03358 NADPH-dependent FMN reductase 10 132 2.0E-17 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 vfu_A02916 1d2986876f4c2b0cb3d9575b503b01bb 185 Gene3D G3DSA:3.40.50.360 1 185 6.0E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A02916 1d2986876f4c2b0cb3d9575b503b01bb 185 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 vfu_B01478 b1fd3e44c821a69e2b665f8fc0a8f289 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 278 2.8E-71 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_B01478 b1fd3e44c821a69e2b665f8fc0a8f289 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 305 6.3E-84 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_B01478 b1fd3e44c821a69e2b665f8fc0a8f289 321 PIRSF PIRSF006470 1 319 1.8E-90 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_B01478 b1fd3e44c821a69e2b665f8fc0a8f289 321 Gene3D G3DSA:3.40.190.170 27 321 5.0E-101 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_B01478 b1fd3e44c821a69e2b665f8fc0a8f289 321 SUPERFAMILY SSF53850 46 272 1.5E-7 T 12-10-2018 vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 Gene3D G3DSA:3.40.30.10 4 165 4.6E-61 T 12-10-2018 vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 PRINTS PR00160 Glutaredoxin signature 228 241 1.4E-13 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 PRINTS PR00160 Glutaredoxin signature 214 227 1.4E-13 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 PRINTS PR00160 Glutaredoxin signature 173 191 1.4E-13 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 SUPERFAMILY SSF52833 2 240 5.38E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 Gene3D G3DSA:3.40.30.10 171 241 1.2E-22 T 12-10-2018 vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 Pfam PF08534 Redoxin 5 160 3.4E-31 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 Pfam PF00462 Glutaredoxin 173 231 1.3E-17 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 vfu_A00626 d43f14e9880426720b4a5c0d809761c3 244 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 5.5E-40 T 12-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 SUPERFAMILY SSF57716 108 146 6.27E-10 T 12-10-2018 vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.904 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 4.4E-10 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 Gene3D G3DSA:1.20.120.910 17 147 7.6E-36 T 12-10-2018 vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 5.5E-51 T 12-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 SUPERFAMILY SSF109635 7 107 2.88E-37 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 12-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria vfu_A00894 59a4efd3ff10fd1953f4baccd4064eb0 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 114 376 4.2E-30 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 SUPERFAMILY SSF88697 3 72 5.47E-18 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.957 T 12-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 SMART SM00359 3 87 3.8E-15 T 12-10-2018 IPR002478 PUA domain GO:0003723 vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 SUPERFAMILY SSF53335 78 393 1.82E-70 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 Gene3D G3DSA:3.40.50.150 181 396 2.4E-68 T 12-10-2018 vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 Gene3D G3DSA:2.30.130.10 2 71 1.5E-28 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 vfu_A02014 d5b6296f2738e6ef3720c74a02669c57 397 Gene3D G3DSA:3.30.750.80 72 180 6.3E-37 T 12-10-2018 vfu_B00357 3207483bf682463cfd3ff9d361522227 226 Pfam PF07238 PilZ domain 116 211 7.2E-11 T 12-10-2018 IPR009875 PilZ domain GO:0035438 vfu_B00357 3207483bf682463cfd3ff9d361522227 226 Pfam PF12945 Flagellar protein YcgR 17 107 2.0E-11 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal vfu_B00357 3207483bf682463cfd3ff9d361522227 226 Gene3D G3DSA:2.30.110.10 3 114 4.1E-13 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_B00357 3207483bf682463cfd3ff9d361522227 226 SUPERFAMILY SSF141371 6 117 2.59E-26 T 12-10-2018 vfu_B00357 3207483bf682463cfd3ff9d361522227 226 SUPERFAMILY SSF141371 118 221 8.63E-14 T 12-10-2018 vfu_B00357 3207483bf682463cfd3ff9d361522227 226 Gene3D G3DSA:2.40.10.220 115 216 4.7E-6 T 12-10-2018 vfu_B00822 77d260808740147e4a63958b8c1389e8 138 Pfam PF03061 Thioesterase superfamily 51 115 1.6E-8 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 vfu_B00822 77d260808740147e4a63958b8c1389e8 138 Gene3D G3DSA:3.10.129.10 2 137 2.7E-24 T 12-10-2018 vfu_B00822 77d260808740147e4a63958b8c1389e8 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 24 119 8.0E-10 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 vfu_B00822 77d260808740147e4a63958b8c1389e8 138 SUPERFAMILY SSF54637 7 131 2.26E-26 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_B01504 877b7c2b3cc905e46659fbd01dedd675 303 SUPERFAMILY SSF46689 194 245 1.96E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01504 877b7c2b3cc905e46659fbd01dedd675 303 Pfam PF12833 Helix-turn-helix domain 217 292 2.7E-16 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01504 877b7c2b3cc905e46659fbd01dedd675 303 Gene3D G3DSA:1.10.10.60 194 298 4.2E-24 T 12-10-2018 vfu_B01504 877b7c2b3cc905e46659fbd01dedd675 303 Pfam PF06719 AraC-type transcriptional regulator N-terminus 32 182 2.1E-48 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal vfu_B01504 877b7c2b3cc905e46659fbd01dedd675 303 SMART SM00342 211 294 6.8E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01504 877b7c2b3cc905e46659fbd01dedd675 303 SUPERFAMILY SSF46689 247 295 3.27E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00496 18055f9f131b4996e5a4255e5ae7b702 303 Gene3D G3DSA:3.40.50.1980 171 274 2.1E-92 T 12-10-2018 vfu_B00496 18055f9f131b4996e5a4255e5ae7b702 303 Pfam PF01497 Periplasmic binding protein 43 275 1.6E-16 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_B00496 18055f9f131b4996e5a4255e5ae7b702 303 SUPERFAMILY SSF53807 16 281 1.57E-55 T 12-10-2018 vfu_B00496 18055f9f131b4996e5a4255e5ae7b702 303 Gene3D G3DSA:3.40.50.1980 25 280 2.1E-92 T 12-10-2018 vfu_A03050 479edeea5eca4a3a3bb5f54ad08b32f9 345 Gene3D G3DSA:3.30.450.90 1 100 2.7E-36 T 12-10-2018 vfu_A03050 479edeea5eca4a3a3bb5f54ad08b32f9 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A03050 479edeea5eca4a3a3bb5f54ad08b32f9 345 Pfam PF00437 Type II/IV secretion system protein 12 271 3.3E-46 T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A03050 479edeea5eca4a3a3bb5f54ad08b32f9 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 331 8.0E-151 T 12-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 vfu_A03050 479edeea5eca4a3a3bb5f54ad08b32f9 345 SUPERFAMILY SSF52540 5 336 6.46E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03050 479edeea5eca4a3a3bb5f54ad08b32f9 345 Gene3D G3DSA:3.40.50.300 101 344 2.0E-101 T 12-10-2018 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 SMART SM00342 199 282 2.1E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 Gene3D G3DSA:1.10.10.60 233 289 1.1E-16 T 12-10-2018 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 SUPERFAMILY SSF51182 13 111 3.56E-6 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 SUPERFAMILY SSF46689 183 233 2.15E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 SUPERFAMILY SSF46689 235 288 3.23E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 Pfam PF12833 Helix-turn-helix domain 205 284 2.7E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 Gene3D G3DSA:1.10.10.60 181 232 4.0E-10 T 12-10-2018 vfu_B00857 a2af9f850b32b5bf4e911df5dbc99ff9 295 Pfam PF02311 AraC-like ligand binding domain 26 152 9.6E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 Gene3D G3DSA:1.10.300.10 99 200 6.8E-73 T 12-10-2018 vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 138.968 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 Gene3D G3DSA:3.40.440.10 6 255 6.8E-73 T 12-10-2018 vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 Gene3D G3DSA:3.90.170.10 266 418 1.8E-48 T 12-10-2018 vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 SUPERFAMILY SSF52540 1 417 3.61E-120 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 3.2E-129 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_B00034 4e400a5bea278226451ddc1e42f476e1 418 SMART SM00788 3 417 5.3E-173 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 Gene3D G3DSA:3.90.1150.10 40 387 3.3E-134 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 Pfam PF00155 Aminotransferase class I and II 43 386 4.7E-74 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 Gene3D G3DSA:3.40.640.10 58 296 3.3E-134 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 SUPERFAMILY SSF53383 4 395 1.48E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 6.8E-208 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 vfu_B00563 e930c13dc4a2f2b41ab6e9f6e1541e29 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.244 T 12-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 vfu_A01700 b618482411c081caca0477b6192d21f0 453 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 56 442 2.7E-97 T 12-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 vfu_A01700 b618482411c081caca0477b6192d21f0 453 Pfam PF03606 C4-dicarboxylate anaerobic carrier 9 451 9.6E-73 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 vfu_B00640 bd56e4c2741a79c9befbd02b73c2780d 478 SUPERFAMILY SSF55021 398 462 2.29E-10 T 12-10-2018 vfu_B00640 bd56e4c2741a79c9befbd02b73c2780d 478 SUPERFAMILY SSF53633 4 307 1.19E-53 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_B00640 bd56e4c2741a79c9befbd02b73c2780d 478 Pfam PF00696 Amino acid kinase family 4 293 1.7E-23 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_B00640 bd56e4c2741a79c9befbd02b73c2780d 478 Gene3D G3DSA:3.40.1160.10 3 307 1.6E-55 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_B00640 bd56e4c2741a79c9befbd02b73c2780d 478 Gene3D G3DSA:3.30.2130.10 311 465 1.2E-9 T 12-10-2018 vfu_A02528 ce92fe3f610cc30d086fd25e62b0db48 155 SUPERFAMILY SSF88697 5 46 7.46E-9 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A02528 ce92fe3f610cc30d086fd25e62b0db48 155 Gene3D G3DSA:2.30.130.30 1 84 2.0E-25 T 12-10-2018 vfu_A02528 ce92fe3f610cc30d086fd25e62b0db48 155 Pfam PF12961 Domain of Unknown Function with PDB structure (DUF3850) 7 81 7.7E-30 T 12-10-2018 IPR039440 Domain of unknown function DUF3850 vfu_A01614 6ce8617fdfe567801196bfbf9d9657fb 551 Gene3D G3DSA:3.30.70.270 377 547 3.2E-35 T 12-10-2018 vfu_A01614 6ce8617fdfe567801196bfbf9d9657fb 551 SUPERFAMILY SSF55073 387 544 5.57E-29 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01614 6ce8617fdfe567801196bfbf9d9657fb 551 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 378 541 1.6E-27 T 12-10-2018 IPR000160 GGDEF domain vfu_A01614 6ce8617fdfe567801196bfbf9d9657fb 551 SMART SM00267 371 543 2.4E-29 T 12-10-2018 IPR000160 GGDEF domain vfu_A01614 6ce8617fdfe567801196bfbf9d9657fb 551 Pfam PF00990 Diguanylate cyclase, GGDEF domain 383 538 3.2E-30 T 12-10-2018 IPR000160 GGDEF domain vfu_B00185 0343737561b39a293585e66347b7a942 107 Gene3D G3DSA:2.60.40.180 1 107 1.7E-33 T 12-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 ProSitePatterns PS00769 Transthyretin signature 2. 90 102 - T 12-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 SUPERFAMILY SSF49472 1 107 1.44E-33 T 12-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 12-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 PRINTS PR00189 Transthyretin signature 3 23 6.5E-10 T 12-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 PRINTS PR00189 Transthyretin signature 85 107 6.5E-10 T 12-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 Pfam PF00576 HIUase/Transthyretin family 4 106 5.3E-33 T 12-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 vfu_B00185 0343737561b39a293585e66347b7a942 107 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 1 107 3.7E-34 T 12-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 SMART SM00422 1 70 3.4E-26 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 Gene3D G3DSA:1.10.1660.10 1 117 1.6E-32 T 12-10-2018 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.3E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.3E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.3E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 Pfam PF13411 MerR HTH family regulatory protein 1 66 4.7E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00055 0bd032bc65b47a757127e79c0f7192fd 118 SUPERFAMILY SSF46955 1 113 6.59E-31 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 Gene3D G3DSA:3.30.565.10 307 446 9.0E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 444 4.5E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 Gene3D G3DSA:1.10.287.130 192 293 3.3E-6 T 12-10-2018 vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 1.2E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 SUPERFAMILY SSF55874 308 443 6.02E-22 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01708 cbb3db610618e1e8f9fda3f4170a1ebd 448 SMART SM00387 340 447 1.2E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00731 bc790c35b683504ba7d2ae72f1e3ca5c 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_A00731 bc790c35b683504ba7d2ae72f1e3ca5c 151 SUPERFAMILY SSF55804 1 146 8.11E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_A00731 bc790c35b683504ba7d2ae72f1e3ca5c 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.7E-53 T 12-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 vfu_A00731 bc790c35b683504ba7d2ae72f1e3ca5c 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 2.7E-37 T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_A00731 bc790c35b683504ba7d2ae72f1e3ca5c 151 Gene3D G3DSA:3.40.930.10 1 151 1.1E-53 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_A00658 155dc498937c0d817edca3a8b3558d41 187 Gene3D G3DSA:2.40.10.330 71 121 1.0E-57 T 12-10-2018 vfu_A00658 155dc498937c0d817edca3a8b3558d41 187 SUPERFAMILY SSF54534 2 140 2.75E-33 T 12-10-2018 vfu_A00658 155dc498937c0d817edca3a8b3558d41 187 Gene3D G3DSA:3.10.50.40 3 154 1.0E-57 T 12-10-2018 vfu_A00658 155dc498937c0d817edca3a8b3558d41 187 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 1.1E-10 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 SUPERFAMILY SSF53756 4 484 6.28E-116 T 12-10-2018 vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 Hamap MF_00484 Glycogen synthase [glgA]. 8 485 41.035 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 Pfam PF08323 Starch synthase catalytic domain 9 240 1.3E-69 T 12-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 Gene3D G3DSA:3.40.50.2000 258 469 3.0E-160 T 12-10-2018 vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 Pfam PF00534 Glycosyl transferases group 1 301 447 1.2E-14 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 Gene3D G3DSA:3.40.50.2000 10 483 3.0E-160 T 12-10-2018 vfu_A01617 34f3bab7cd28f38ac64c2e690ad27eb3 488 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 9 483 2.0E-158 T 12-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 vfu_A01871 d9a64defcd1211df6cf76768a4d6a242 232 SUPERFAMILY SSF161098 7 221 1.02E-30 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01871 d9a64defcd1211df6cf76768a4d6a242 232 Gene3D G3DSA:1.10.3720.10 1 229 2.7E-29 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01871 d9a64defcd1211df6cf76768a4d6a242 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 218 4.0E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01745 6b4874d1e86d015f5ac42a53f17fe133 419 Gene3D G3DSA:1.20.1420.20 12 403 4.3E-82 T 12-10-2018 IPR038352 Imelysin-like domain superfamily vfu_A01745 6b4874d1e86d015f5ac42a53f17fe133 419 Pfam PF09375 Imelysin 39 397 1.7E-97 T 12-10-2018 IPR018976 Imelysin-like domain vfu_A02134 b588879492b3da40d54d0414821a39cb 97 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 2.1E-50 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.628 T 12-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 Gene3D G3DSA:4.10.520.10 1 97 1.4E-37 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.8E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.8E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.8E-17 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 SUPERFAMILY SSF47729 3 95 4.56E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.2E-31 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 vfu_A02134 b588879492b3da40d54d0414821a39cb 97 SMART SM00411 3 92 1.7E-39 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A00686 4b6ba1581a9e0b6e5af0afe384d87ffe 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.052 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 vfu_A00686 4b6ba1581a9e0b6e5af0afe384d87ffe 144 Gene3D G3DSA:3.100.10.10 70 144 4.8E-13 T 12-10-2018 vfu_A00686 4b6ba1581a9e0b6e5af0afe384d87ffe 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00686 4b6ba1581a9e0b6e5af0afe384d87ffe 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 3.7E-50 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00686 4b6ba1581a9e0b6e5af0afe384d87ffe 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.9E-31 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P vfu_A00686 4b6ba1581a9e0b6e5af0afe384d87ffe 144 SUPERFAMILY SSF52080 4 143 1.44E-46 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.0E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.0E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.0E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 SUPERFAMILY SSF46955 2 102 8.42E-22 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 Gene3D G3DSA:1.10.1660.10 1 120 1.2E-23 T 12-10-2018 vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 Pfam PF13411 MerR HTH family regulatory protein 2 68 1.1E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A01705 ad5d194c14cec1455dfb3bc05f7675cc 135 SMART SM00422 2 70 1.3E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00226 44cf5fe5cb28b723e8abe0b26fa5a20d 322 SUPERFAMILY SSF56349 133 313 4.12E-24 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_B00226 44cf5fe5cb28b723e8abe0b26fa5a20d 322 SUPERFAMILY SSF47823 33 125 1.04E-20 T 12-10-2018 vfu_B00226 44cf5fe5cb28b723e8abe0b26fa5a20d 322 Gene3D G3DSA:1.10.150.130 27 128 5.8E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_B00226 44cf5fe5cb28b723e8abe0b26fa5a20d 322 Gene3D G3DSA:1.10.443.10 129 305 1.9E-29 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_B00226 44cf5fe5cb28b723e8abe0b26fa5a20d 322 Pfam PF00589 Phage integrase family 136 302 4.1E-6 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_B00515 fbdf45e1ce8cfca8f05a0b6f13ff3de7 350 SUPERFAMILY SSF55874 206 334 4.58E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00515 fbdf45e1ce8cfca8f05a0b6f13ff3de7 350 Pfam PF06580 Histidine kinase 151 228 3.3E-25 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 vfu_B00515 fbdf45e1ce8cfca8f05a0b6f13ff3de7 350 Gene3D G3DSA:3.30.565.10 200 337 2.6E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 2.0E-87 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 SUPERFAMILY SSF55315 3 77 4.0E-20 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 Gene3D G3DSA:3.30.1330.30 1 77 3.8E-27 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 3.0E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 SMART SM00967 5 81 1.6E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.628 T 12-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 SUPERFAMILY SSF75217 69 244 6.41E-48 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 Pfam PF00588 SpoU rRNA Methylase family 97 237 3.7E-39 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 vfu_A00665 686563a31b84f55cf4bc413bfe5d58c2 246 Gene3D G3DSA:3.40.1280.10 78 244 2.3E-65 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_B00452 78d7762aa2b423302ac96b3561908e91 247 Gene3D G3DSA:3.40.50.300 5 247 1.7E-73 T 12-10-2018 vfu_B00452 78d7762aa2b423302ac96b3561908e91 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00452 78d7762aa2b423302ac96b3561908e91 247 SMART SM00382 32 223 1.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00452 78d7762aa2b423302ac96b3561908e91 247 Pfam PF00005 ABC transporter 23 175 1.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00452 78d7762aa2b423302ac96b3561908e91 247 PIRSF PIRSF039085 5 247 7.4E-89 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 vfu_B00452 78d7762aa2b423302ac96b3561908e91 247 SUPERFAMILY SSF52540 8 240 2.89E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 8 420 2.8E-174 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 Gene3D G3DSA:3.40.640.10 58 317 6.5E-155 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 SUPERFAMILY SSF53383 20 420 4.32E-127 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 PIRSF PIRSF000521 123 422 5.9E-43 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 PIRSF PIRSF000521 1 128 3.6E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 Pfam PF00202 Aminotransferase class-III 23 419 1.4E-126 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_B00033 d6578c6f390f2c02332ef74b73ccb618 423 Gene3D G3DSA:3.90.1150.10 4 416 6.5E-155 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 Pfam PF00482 Type II secretion system (T2SS), protein F 73 195 4.5E-35 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 8.5E-25 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 Gene3D G3DSA:1.20.81.30 59 174 8.8E-37 T 12-10-2018 vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 Gene3D G3DSA:1.20.81.30 258 370 4.6E-26 T 12-10-2018 vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.2E-37 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.2E-37 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.2E-37 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.2E-37 T 12-10-2018 IPR003004 GspF/PilC family vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 12-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 vfu_A00513 68c147853b0efaa41e4dfab34e0cab36 407 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 9.2E-159 T 12-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 vfu_B00446 a880b668518897fa03b7a575929f0c23 672 Gene3D G3DSA:3.40.390.10 121 297 4.7E-6 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 vfu_B00446 a880b668518897fa03b7a575929f0c23 672 SUPERFAMILY SSF55486 180 302 5.5E-11 T 12-10-2018 vfu_B00446 a880b668518897fa03b7a575929f0c23 672 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 461 536 1.1E-9 T 12-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain vfu_B00446 a880b668518897fa03b7a575929f0c23 672 Pfam PF05548 Gametolysin peptidase M11 190 302 2.7E-8 T 12-10-2018 IPR008752 Peptidase M11, gametolysin vfu_B00446 a880b668518897fa03b7a575929f0c23 672 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 459 494 4.5E-4 T 12-10-2018 IPR001434 Domain of unknown function DUF11 vfu_B00446 a880b668518897fa03b7a575929f0c23 672 Gene3D G3DSA:2.60.40.10 443 553 6.1E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01372 868730975d54d7d900ae815bd536c50e 218 SUPERFAMILY SSF56784 7 217 2.13E-39 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B01372 868730975d54d7d900ae815bd536c50e 218 Gene3D G3DSA:3.40.50.1000 9 190 2.7E-40 T 12-10-2018 IPR023214 HAD superfamily vfu_B01372 868730975d54d7d900ae815bd536c50e 218 Gene3D G3DSA:1.10.150.240 21 88 2.7E-40 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_B01372 868730975d54d7d900ae815bd536c50e 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 188 1.8E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B01372 868730975d54d7d900ae815bd536c50e 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 187 2.6E-23 T 12-10-2018 vfu_B00571 0acb08998f805908aa9b5415056d62b9 251 SUPERFAMILY SSF89550 5 244 4.97E-60 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 vfu_B00571 0acb08998f805908aa9b5415056d62b9 251 Gene3D G3DSA:3.20.20.140 3 247 2.8E-63 T 12-10-2018 vfu_B00571 0acb08998f805908aa9b5415056d62b9 251 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.76 T 12-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 vfu_B00571 0acb08998f805908aa9b5415056d62b9 251 SMART SM00481 5 79 1.8E-6 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal vfu_A00535 a5d7b1678b7d97301144ecc4846b3051 459 Pfam PF02447 GntP family permease 13 458 6.5E-121 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_A00535 a5d7b1678b7d97301144ecc4846b3051 459 PIRSF PIRSF002746 9 459 6.0E-148 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_A00535 a5d7b1678b7d97301144ecc4846b3051 459 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 459 2.2E-108 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_B01474 ca42679b34166dff3f2b346ec8c7a01d 470 SUPERFAMILY SSF51556 3 466 1.34E-186 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_B01474 ca42679b34166dff3f2b346ec8c7a01d 470 Gene3D G3DSA:3.20.20.140 7 465 6.1E-203 T 12-10-2018 vfu_B01474 ca42679b34166dff3f2b346ec8c7a01d 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.621 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 vfu_B01474 ca42679b34166dff3f2b346ec8c7a01d 470 Gene3D G3DSA:1.10.2020.10 46 137 6.1E-203 T 12-10-2018 vfu_B01474 ca42679b34166dff3f2b346ec8c7a01d 470 Pfam PF02614 Glucuronate isomerase 1 465 5.1E-228 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 vfu_A00746 cd0580b3cf8c6980d939a0258cb045d9 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.7E-183 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00746 cd0580b3cf8c6980d939a0258cb045d9 421 Gene3D G3DSA:3.65.10.10 13 414 1.6E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 vfu_A00746 cd0580b3cf8c6980d939a0258cb045d9 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 407 1.4E-121 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 vfu_A00746 cd0580b3cf8c6980d939a0258cb045d9 421 Gene3D G3DSA:3.65.10.10 22 230 1.6E-170 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 vfu_A00746 cd0580b3cf8c6980d939a0258cb045d9 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.834 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00746 cd0580b3cf8c6980d939a0258cb045d9 421 SUPERFAMILY SSF55205 3 418 5.07E-142 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 1.9E-115 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 PIRSF PIRSF001589 362 511 1.3E-26 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 PIRSF PIRSF001589 1 379 2.1E-107 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 Pfam PF00733 Asparagine synthase 212 366 6.5E-57 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 Gene3D G3DSA:3.60.20.10 2 193 2.6E-69 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 Gene3D G3DSA:3.40.50.620 194 514 8.2E-112 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 4.4E-40 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 SUPERFAMILY SSF52402 210 479 1.6E-73 T 12-10-2018 vfu_A02609 5b52b999ea94e9f7563fd70321cfde46 554 SUPERFAMILY SSF56235 1 196 8.23E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_B01454 dc3421896afa47ac9d600d0234a532c5 321 SUPERFAMILY SSF161098 28 307 1.21E-31 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01454 dc3421896afa47ac9d600d0234a532c5 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 307 1.5E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01454 dc3421896afa47ac9d600d0234a532c5 321 Gene3D G3DSA:1.10.3720.10 74 314 1.6E-32 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01454 dc3421896afa47ac9d600d0234a532c5 321 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 19 312 7.1E-85 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 vfu_B00099 f3dd66d9b55608922b1b9e63df3c757d 250 SUPERFAMILY SSF69572 4 248 2.09E-83 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 vfu_B00099 f3dd66d9b55608922b1b9e63df3c757d 250 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 1.7E-131 T 12-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 vfu_B00099 f3dd66d9b55608922b1b9e63df3c757d 250 Pfam PF00899 ThiF family 12 245 1.4E-62 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 vfu_B00099 f3dd66d9b55608922b1b9e63df3c757d 250 Gene3D G3DSA:3.40.50.720 4 250 2.1E-86 T 12-10-2018 vfu_A02944 0256c55e943819f27804acab08e74afe 196 Pfam PF13580 SIS domain 9 144 2.4E-33 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A02944 0256c55e943819f27804acab08e74afe 196 Gene3D G3DSA:3.40.50.10490 1 195 1.1E-72 T 12-10-2018 vfu_A02944 0256c55e943819f27804acab08e74afe 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.658 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 vfu_A02944 0256c55e943819f27804acab08e74afe 196 SUPERFAMILY SSF53697 1 191 2.0E-56 T 12-10-2018 vfu_A01757 b551e1cb52ab108b2961d7daaa7bb358 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 3.0E-100 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_A01757 b551e1cb52ab108b2961d7daaa7bb358 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 2.0E-104 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A01757 b551e1cb52ab108b2961d7daaa7bb358 427 PIRSF PIRSF006066 1 426 6.1E-73 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 SUPERFAMILY SSF159127 1 81 1.05E-22 T 12-10-2018 IPR037254 HupF/HypC superfamily vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 81 1.1E-22 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 Gene3D G3DSA:2.40.50.970 1 81 2.9E-26 T 12-10-2018 IPR037254 HupF/HypC superfamily vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 Pfam PF01455 HupF/HypC family 1 67 9.4E-22 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 19 35 1.2E-13 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 59 71 1.2E-13 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.2E-13 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC vfu_A02047 b4aae24c8e14fa97e5b7e3031615e748 85 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 41 57 1.2E-13 T 12-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 37.455 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 Gene3D G3DSA:3.40.50.720 6 329 2.2E-118 T 12-10-2018 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 SUPERFAMILY SSF51735 1 171 2.24E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 311 3.1E-14 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 5.0E-119 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 144 2.5E-30 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 SUPERFAMILY SSF55347 154 308 8.29E-50 T 12-10-2018 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 Gene3D G3DSA:3.30.360.10 153 312 2.2E-118 T 12-10-2018 vfu_A00620 620fa0007b2873a4f84ba269a26e6940 334 SMART SM00859 3 146 7.3E-43 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 SUPERFAMILY SSF55031 177 284 5.63E-25 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 SUPERFAMILY SSF53187 2 373 1.14E-42 T 12-10-2018 vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 PIRSF PIRSF037238 1 373 1.9E-147 T 12-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 Pfam PF01546 Peptidase family M20/M25/M40 73 370 3.1E-24 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 Pfam PF07687 Peptidase dimerisation domain 175 271 1.2E-22 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 Gene3D G3DSA:3.30.70.360 177 286 2.9E-107 T 12-10-2018 vfu_A02318 41059faa37de11bd920edb7c380eaa81 373 Gene3D G3DSA:3.40.630.10 11 361 2.9E-107 T 12-10-2018 vfu_A00900 b531093264862b44b7c7a482384f6c00 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 4.0E-42 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 vfu_A00900 b531093264862b44b7c7a482384f6c00 123 PIRSF PIRSF006287 1 123 2.2E-47 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 vfu_A00900 b531093264862b44b7c7a482384f6c00 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 3.4E-42 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 vfu_A00900 b531093264862b44b7c7a482384f6c00 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 29.801 T 12-10-2018 IPR008249 Uncharacterised protein family UPF0231 vfu_A00588 6efd6958f7130eb3e57c9ae7a50184d1 151 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 74 148 1.5E-31 T 12-10-2018 IPR011930 Cell division protein FtsN GO:0005515 vfu_A00588 6efd6958f7130eb3e57c9ae7a50184d1 151 Pfam PF05036 Sporulation related domain 77 146 3.4E-13 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 vfu_A00588 6efd6958f7130eb3e57c9ae7a50184d1 151 SUPERFAMILY SSF110997 76 147 1.18E-16 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_A00588 6efd6958f7130eb3e57c9ae7a50184d1 151 Gene3D G3DSA:3.30.70.1070 71 150 3.4E-27 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_A03066 c391909efe3a05be6304d917dfc7bbc3 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 12-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 vfu_A03066 c391909efe3a05be6304d917dfc7bbc3 375 SUPERFAMILY SSF53955 178 370 5.63E-37 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A03066 c391909efe3a05be6304d917dfc7bbc3 375 Gene3D G3DSA:1.10.530.10 190 370 1.5E-49 T 12-10-2018 vfu_A03066 c391909efe3a05be6304d917dfc7bbc3 375 Pfam PF01464 Transglycosylase SLT domain 211 334 1.6E-28 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A03066 c391909efe3a05be6304d917dfc7bbc3 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 205 7.3E-77 T 12-10-2018 IPR024570 Murein transglycosylase-C, N-terminal vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.827 T 12-10-2018 IPR033752 MetA family vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.9E-135 T 12-10-2018 IPR033752 MetA family vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 PIRSF PIRSF000450 1 309 3.8E-148 T 12-10-2018 IPR033752 MetA family vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 Gene3D G3DSA:3.40.50.880 1 301 2.5E-124 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 5.9E-163 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-127 T 12-10-2018 vfu_A02075 52454669274c7ec6fcacea113b9a4e6c 313 SUPERFAMILY SSF52317 17 297 4.58E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A01160 b253f1f9342613a6b403d47e6e9a0c84 180 Gene3D G3DSA:3.30.70.260 1 85 3.4E-25 T 12-10-2018 vfu_A01160 b253f1f9342613a6b403d47e6e9a0c84 180 PIRSF PIRSF028103 1 178 4.8E-61 T 12-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 vfu_A01160 b253f1f9342613a6b403d47e6e9a0c84 180 Gene3D G3DSA:3.30.70.260 87 180 2.3E-42 T 12-10-2018 vfu_A01160 b253f1f9342613a6b403d47e6e9a0c84 180 SUPERFAMILY SSF55021 1 83 8.46E-18 T 12-10-2018 vfu_A01160 b253f1f9342613a6b403d47e6e9a0c84 180 Pfam PF13740 ACT domain 3 78 3.0E-24 T 12-10-2018 vfu_A01160 b253f1f9342613a6b403d47e6e9a0c84 180 SUPERFAMILY SSF55021 88 176 2.11E-21 T 12-10-2018 vfu_A02367 6b129a153627f6e3ef99c5fcdd849935 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 4.9E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02367 6b129a153627f6e3ef99c5fcdd849935 246 SUPERFAMILY SSF161098 11 233 8.24E-38 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02367 6b129a153627f6e3ef99c5fcdd849935 246 Gene3D G3DSA:1.10.3720.10 3 243 4.6E-48 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02367 6b129a153627f6e3ef99c5fcdd849935 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 1.0E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 161 4.8E-7 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 Pfam PF12464 Maltose acetyltransferase 6 55 1.3E-9 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 SUPERFAMILY SSF51161 2 183 3.47E-44 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 SMART SM01266 4 56 6.9E-11 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 91 104 0.015 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 vfu_B01311 2f7e6c392825779eccdb1529489adb00 190 Gene3D G3DSA:2.160.10.10 1 188 2.5E-65 T 12-10-2018 vfu_A00498 c59797779c798b185e891cd662b576b2 469 SUPERFAMILY SSF55931 102 468 2.45E-138 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 vfu_A00498 c59797779c798b185e891cd662b576b2 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A00498 c59797779c798b185e891cd662b576b2 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.2E-139 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A00498 c59797779c798b185e891cd662b576b2 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 vfu_A00498 c59797779c798b185e891cd662b576b2 469 Gene3D G3DSA:3.30.590.10 105 457 2.2E-149 T 12-10-2018 vfu_A00498 c59797779c798b185e891cd662b576b2 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 vfu_A00498 c59797779c798b185e891cd662b576b2 469 Gene3D G3DSA:3.10.20.70 2 104 1.2E-40 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A00498 c59797779c798b185e891cd662b576b2 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 5.0E-31 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 vfu_A00498 c59797779c798b185e891cd662b576b2 469 SMART SM01230 102 379 6.4E-154 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A00498 c59797779c798b185e891cd662b576b2 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 9.9E-213 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A00498 c59797779c798b185e891cd662b576b2 469 SUPERFAMILY SSF54368 3 100 4.71E-36 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 vfu_A00760 c72f6a926c7c545e91b8ada184501d00 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 4.2E-31 T 12-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 vfu_A00760 c72f6a926c7c545e91b8ada184501d00 149 SUPERFAMILY SSF102400 1 145 1.31E-39 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily vfu_A00760 c72f6a926c7c545e91b8ada184501d00 149 Gene3D G3DSA:3.40.50.10110 1 146 1.1E-39 T 12-10-2018 IPR036768 DNA polymerase III subunit chi superfamily vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 Pfam PF02110 Hydroxyethylthiazole kinase family 10 251 2.6E-71 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 SUPERFAMILY SSF53613 6 260 1.37E-58 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 2.1E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.1E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.1E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.1E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.1E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.1E-34 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 PIRSF PIRSF000513 4 263 1.2E-94 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 Gene3D G3DSA:3.40.1190.20 1 264 1.4E-88 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00549 b545db1c2acf2e62daab0a27a9701298 264 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 29.625 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A00903 f3c49abbe9fd023f438d91ea2713d0bf 337 Gene3D G3DSA:3.40.190.10 25 297 7.5E-123 T 12-10-2018 vfu_A00903 f3c49abbe9fd023f438d91ea2713d0bf 337 Gene3D G3DSA:3.40.190.10 120 328 7.5E-123 T 12-10-2018 vfu_A00903 f3c49abbe9fd023f438d91ea2713d0bf 337 SUPERFAMILY SSF53850 23 334 3.76E-71 T 12-10-2018 vfu_A00903 f3c49abbe9fd023f438d91ea2713d0bf 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 298 3.3E-17 T 12-10-2018 vfu_A00903 f3c49abbe9fd023f438d91ea2713d0bf 337 PIRSF PIRSF002825 2 337 1.5E-95 T 12-10-2018 IPR026045 Ferric binding protein vfu_A02515 7788c58ef5c6cc60af570184d882e8f8 236 Pfam PF05944 Phage small terminase subunit 35 166 6.8E-39 T 12-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 Pfam PF00005 ABC transporter 22 191 9.8E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 SUPERFAMILY SSF52540 303 393 1.16E-22 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 Gene3D G3DSA:3.40.50.300 286 443 5.9E-40 T 12-10-2018 vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 Gene3D G3DSA:3.40.50.300 1 285 2.8E-85 T 12-10-2018 vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 Pfam PF12848 ABC transporter 230 306 3.0E-13 T 12-10-2018 IPR032781 ABC-transporter extension domain vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 SUPERFAMILY SSF52540 9 243 8.98E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 SMART SM00382 348 437 2.2 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 SMART SM00382 31 236 2.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00997 610b1d2f3095bdb1e316e19c7ba8fc02 443 Pfam PF00005 ABC transporter 340 407 1.4E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.9E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 Pfam PF03466 LysR substrate binding domain 88 289 1.3E-41 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.5E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 SUPERFAMILY SSF53850 90 293 9.05E-38 T 12-10-2018 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 Gene3D G3DSA:3.40.190.290 92 294 2.0E-45 T 12-10-2018 vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 Gene3D G3DSA:1.10.10.10 1 91 8.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01219 6ea4aca1fd89505d196b088b6b2549c0 298 SUPERFAMILY SSF46785 1 86 3.89E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00604 5af34a47fd776beeb20458a0a5dc63ce 351 Pfam PF00419 Fimbrial protein 198 350 2.3E-13 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 vfu_B00604 5af34a47fd776beeb20458a0a5dc63ce 351 SUPERFAMILY SSF49401 206 351 1.54E-13 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_B00604 5af34a47fd776beeb20458a0a5dc63ce 351 Gene3D G3DSA:2.60.40.1090 196 350 7.9E-12 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_A01893 1db762f9621b01e01bea21ef96b1bfaf 285 SUPERFAMILY SSF161098 9 274 6.41E-54 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01893 1db762f9621b01e01bea21ef96b1bfaf 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 2.1E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01893 1db762f9621b01e01bea21ef96b1bfaf 285 Gene3D G3DSA:1.10.3720.10 6 277 1.5E-53 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00805 9bf64bc4244db93e682e61be72ee5361 455 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 42 427 1.4E-122 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 vfu_B00805 9bf64bc4244db93e682e61be72ee5361 455 Pfam PF02386 Cation transport protein 45 444 8.0E-56 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 vfu_A02585 60170f2ba6e9b5f8e3248280e3c2b596 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.345 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 vfu_A02585 60170f2ba6e9b5f8e3248280e3c2b596 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 9.8E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_A02585 60170f2ba6e9b5f8e3248280e3c2b596 193 PIRSF PIRSF006102 1 193 7.8E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_A02585 60170f2ba6e9b5f8e3248280e3c2b596 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.8E-90 T 12-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PIRSF PIRSF000350 1 462 8.9E-98 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 343 450 2.6E-34 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 SUPERFAMILY SSF51905 1 330 8.79E-62 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 323 6.2E-69 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 459 1.9E-153 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 Gene3D G3DSA:3.50.50.60 4 329 1.8E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 SUPERFAMILY SSF55424 341 460 6.01E-37 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 Gene3D G3DSA:3.50.50.60 149 270 1.8E-112 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 3.5E-35 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 276 3.5E-35 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 3.5E-35 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 3.5E-35 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.5E-35 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 360 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 261 275 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 2.1E-69 T 12-10-2018 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 Gene3D G3DSA:3.30.390.30 343 462 6.0E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_B00911 9f1e6616852d843b418c6a54a42bd33a 464 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 vfu_B00994 097fb282a2f4a034e8fbbb1ce3b8c092 228 SUPERFAMILY SSF75625 2 227 1.18E-72 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00994 097fb282a2f4a034e8fbbb1ce3b8c092 228 Gene3D G3DSA:3.30.70.980 72 224 1.0E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00994 097fb282a2f4a034e8fbbb1ce3b8c092 228 Pfam PF01709 Transcriptional regulator 2 225 2.2E-69 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00994 097fb282a2f4a034e8fbbb1ce3b8c092 228 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 227 24.735 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00994 097fb282a2f4a034e8fbbb1ce3b8c092 228 Gene3D G3DSA:3.30.70.980 120 191 1.0E-44 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00994 097fb282a2f4a034e8fbbb1ce3b8c092 228 Gene3D G3DSA:1.10.10.200 6 67 4.3E-17 T 12-10-2018 IPR017856 Integrase-like, N-terminal vfu_A01937 2a7ebc1b5f93e42840ca0619ba5811cc 209 SUPERFAMILY SSF48657 5 117 3.92E-38 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily vfu_A01937 2a7ebc1b5f93e42840ca0619ba5811cc 209 Pfam PF04352 ProQ/FINO family 8 115 9.7E-42 T 12-10-2018 IPR016103 ProQ/FinO domain vfu_A01937 2a7ebc1b5f93e42840ca0619ba5811cc 209 SMART SM00945 5 119 3.2E-60 T 12-10-2018 IPR016103 ProQ/FinO domain vfu_A01937 2a7ebc1b5f93e42840ca0619ba5811cc 209 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 209 29.794 T 12-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 vfu_A01937 2a7ebc1b5f93e42840ca0619ba5811cc 209 Gene3D G3DSA:1.10.1710.10 1 118 3.1E-24 T 12-10-2018 IPR036442 ProQ/FinO domain superfamily vfu_A01937 2a7ebc1b5f93e42840ca0619ba5811cc 209 Pfam PF17516 ProQ C-terminal domain 160 208 2.3E-22 T 12-10-2018 IPR035236 RNA chaperone ProQ, C-terminal vfu_A01245 a8e38c047942cadfe8821f00c0447397 142 SUPERFAMILY SSF54197 3 133 5.95E-33 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A01245 a8e38c047942cadfe8821f00c0447397 142 Pfam PF01230 HIT domain 11 100 1.1E-18 T 12-10-2018 IPR001310 Histidine triad (HIT) protein vfu_A01245 a8e38c047942cadfe8821f00c0447397 142 PIRSF PIRSF000714 2 138 3.6E-52 T 12-10-2018 IPR026026 Histidine triad hydrolase, Hint-type vfu_A01245 a8e38c047942cadfe8821f00c0447397 142 Gene3D G3DSA:3.30.428.10 1 139 2.4E-42 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A02884 e967643aec6d5250ce989bc05b48254f 273 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 200 216 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 vfu_A02884 e967643aec6d5250ce989bc05b48254f 273 Gene3D G3DSA:3.20.20.140 10 266 3.2E-76 T 12-10-2018 vfu_A02884 e967643aec6d5250ce989bc05b48254f 273 PIRSF PIRSF005902 1 268 1.5E-63 T 12-10-2018 IPR001130 TatD family GO:0016788 vfu_A02884 e967643aec6d5250ce989bc05b48254f 273 Pfam PF01026 TatD related DNase 13 264 2.7E-61 T 12-10-2018 IPR001130 TatD family GO:0016788 vfu_A02884 e967643aec6d5250ce989bc05b48254f 273 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 12 20 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 vfu_A02884 e967643aec6d5250ce989bc05b48254f 273 SUPERFAMILY SSF51556 12 265 2.33E-69 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A02846 66dd23629277335208ed361474a2d4a2 183 Gene3D G3DSA:3.10.490.10 1 128 2.0E-10 T 12-10-2018 vfu_A02846 66dd23629277335208ed361474a2d4a2 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 110 1.6E-11 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like vfu_A02846 66dd23629277335208ed361474a2d4a2 183 SUPERFAMILY SSF110857 1 123 2.62E-20 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily vfu_A01647 66849a00fc44c8aaaf4c128c527fc621 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 1.9E-73 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal vfu_A01647 66849a00fc44c8aaaf4c128c527fc621 394 Gene3D G3DSA:1.10.3820.10 14 193 4.9E-38 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily vfu_A01647 66849a00fc44c8aaaf4c128c527fc621 394 SUPERFAMILY SSF48695 12 187 4.65E-60 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily vfu_A01647 66849a00fc44c8aaaf4c128c527fc621 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.1E-195 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 vfu_A01647 66849a00fc44c8aaaf4c128c527fc621 394 PIRSF PIRSF000014 1 394 3.5E-168 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 vfu_A02173 1b76eb86a6cbef51cacd56056d37df68 495 SUPERFAMILY SSF53720 7 492 1.06E-171 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A02173 1b76eb86a6cbef51cacd56056d37df68 495 Pfam PF00171 Aldehyde dehydrogenase family 31 487 2.1E-175 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A02173 1b76eb86a6cbef51cacd56056d37df68 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 293 304 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_A02173 1b76eb86a6cbef51cacd56056d37df68 495 Gene3D G3DSA:3.40.309.10 269 458 5.1E-183 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A02173 1b76eb86a6cbef51cacd56056d37df68 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_A02173 1b76eb86a6cbef51cacd56056d37df68 495 Gene3D G3DSA:3.40.605.10 22 486 5.1E-183 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A02942 09b711f46fe72e5a7bb762897173f74b 568 Pfam PF04348 LppC putative lipoprotein 7 566 2.1E-192 T 12-10-2018 IPR007443 Penicillin-binding protein activator LpoA vfu_A02942 09b711f46fe72e5a7bb762897173f74b 568 Gene3D G3DSA:3.40.50.2300 228 561 4.9E-62 T 12-10-2018 vfu_A02942 09b711f46fe72e5a7bb762897173f74b 568 SUPERFAMILY SSF53822 227 565 4.32E-70 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A02942 09b711f46fe72e5a7bb762897173f74b 568 Gene3D G3DSA:1.25.40.650 116 221 1.6E-17 T 12-10-2018 vfu_A02942 09b711f46fe72e5a7bb762897173f74b 568 Gene3D G3DSA:1.25.40.10 3 111 2.3E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02942 09b711f46fe72e5a7bb762897173f74b 568 Gene3D G3DSA:3.40.50.2300 334 562 4.9E-62 T 12-10-2018 vfu_B00071 3feb670efc691770f1f63ec645741203 144 SUPERFAMILY SSF54593 1 129 2.34E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00071 3feb670efc691770f1f63ec645741203 144 Gene3D G3DSA:3.10.180.10 8 144 2.7E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00071 3feb670efc691770f1f63ec645741203 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 7.4E-11 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 Gene3D G3DSA:3.40.190.10 43 539 4.5E-199 T 12-10-2018 vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 SUPERFAMILY SSF53850 40 539 3.26E-107 T 12-10-2018 vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 Gene3D G3DSA:3.10.105.10 268 515 4.5E-199 T 12-10-2018 vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 Gene3D G3DSA:3.90.76.10 62 168 4.5E-199 T 12-10-2018 vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 PIRSF PIRSF002741 7 533 3.1E-67 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 vfu_A00915 41712f772f0e0d4c7a989024ac17a940 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 452 1.0E-77 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_A00714 505ecedeea984c81180de1af4b51817a 211 Pfam PF01625 Peptide methionine sulfoxide reductase 45 197 5.5E-66 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_A00714 505ecedeea984c81180de1af4b51817a 211 Gene3D G3DSA:3.30.1060.10 3 211 4.9E-89 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_A00714 505ecedeea984c81180de1af4b51817a 211 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 36.975 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_A00714 505ecedeea984c81180de1af4b51817a 211 SUPERFAMILY SSF55068 3 207 6.15E-79 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_A00714 505ecedeea984c81180de1af4b51817a 211 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 197 3.4E-67 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_A02920 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Pfam PF03466 LysR substrate binding domain 90 289 3.0E-17 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02920 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Gene3D G3DSA:1.10.10.10 2 89 8.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02920 b3901a38d0e8ca33ae8eb27eb36dbd47 294 SUPERFAMILY SSF46785 5 90 1.88E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02920 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Gene3D G3DSA:3.40.190.290 95 292 2.0E-13 T 12-10-2018 vfu_A02920 b3901a38d0e8ca33ae8eb27eb36dbd47 294 SUPERFAMILY SSF53850 91 291 3.44E-16 T 12-10-2018 vfu_A02920 b3901a38d0e8ca33ae8eb27eb36dbd47 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.1E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00179 f4bf1404f012fc5bfd586f517ad2d260 410 Gene3D G3DSA:3.90.1150.10 16 386 2.7E-131 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00179 f4bf1404f012fc5bfd586f517ad2d260 410 PIRSF PIRSF000524 9 409 6.3E-103 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 vfu_B00179 f4bf1404f012fc5bfd586f517ad2d260 410 Gene3D G3DSA:3.40.640.10 27 288 2.7E-131 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00179 f4bf1404f012fc5bfd586f517ad2d260 410 Pfam PF00266 Aminotransferase class-V 46 361 1.7E-28 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_B00179 f4bf1404f012fc5bfd586f517ad2d260 410 SUPERFAMILY SSF53383 9 389 1.73E-89 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01070 e4031b9eb535b9cd5ba1c9747d9f6b23 222 Gene3D G3DSA:3.40.190.10 48 182 1.2E-76 T 12-10-2018 vfu_B01070 e4031b9eb535b9cd5ba1c9747d9f6b23 222 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 2 221 1.0E-63 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 vfu_B01070 e4031b9eb535b9cd5ba1c9747d9f6b23 222 Gene3D G3DSA:3.40.190.10 1 220 1.2E-76 T 12-10-2018 vfu_B01070 e4031b9eb535b9cd5ba1c9747d9f6b23 222 Pfam PF12849 PBP superfamily domain 4 208 2.5E-35 T 12-10-2018 IPR024370 PBP domain vfu_B01070 e4031b9eb535b9cd5ba1c9747d9f6b23 222 SUPERFAMILY SSF53850 1 221 3.99E-68 T 12-10-2018 vfu_A01112 7df6857910c21969a9c9bbe05edf4c44 378 Gene3D G3DSA:3.40.50.10610 115 291 6.9E-54 T 12-10-2018 vfu_A01112 7df6857910c21969a9c9bbe05edf4c44 378 Pfam PF16539 Flagellar assembly protein T, middle domain 115 257 8.9E-42 T 12-10-2018 IPR032386 Flagellar assembly protein T, middle domain vfu_A01112 7df6857910c21969a9c9bbe05edf4c44 378 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 25 111 7.3E-26 T 12-10-2018 IPR032370 Flagellar assembly protein T, N-terminal vfu_A01112 7df6857910c21969a9c9bbe05edf4c44 378 Gene3D G3DSA:2.40.10.410 292 378 3.5E-35 T 12-10-2018 IPR038165 FlgT, C-terminal domain superfamily vfu_A01112 7df6857910c21969a9c9bbe05edf4c44 378 Gene3D G3DSA:3.30.1660.40 25 114 7.5E-35 T 12-10-2018 IPR038180 FlgT, N-terminal domain superfamily vfu_A01112 7df6857910c21969a9c9bbe05edf4c44 378 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 300 376 6.7E-27 T 12-10-2018 IPR032388 Flagellar assembly protein T, C-terminal vfu_B00010 daa7d52e2bb96bf1e61f42048d971e1a 62 SUPERFAMILY SSF143120 8 48 1.83E-6 T 12-10-2018 IPR036165 YefM-like superfamily vfu_B00010 daa7d52e2bb96bf1e61f42048d971e1a 62 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 57 6.0E-7 T 12-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.40.50.300 6 593 6.5E-249 T 12-10-2018 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Pfam PF00005 ABC transporter 622 859 9.0E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 SUPERFAMILY SSF52540 4 568 8.52E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.20.1580.10 691 829 8.0E-140 T 12-10-2018 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.997 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.40.50.300 616 935 8.0E-140 T 12-10-2018 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.20.1580.10 90 491 6.5E-249 T 12-10-2018 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:3.30.190.20 130 243 6.5E-249 T 12-10-2018 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 Gene3D G3DSA:1.10.8.280 286 402 6.5E-249 T 12-10-2018 vfu_A03123 323e16abbdf2ddd45b2f5be9ad45b248 940 SUPERFAMILY SSF52540 620 912 4.11E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01083 4473970c684e8f6c6829caa4837a370a 206 Hamap MF_00052_B Ribonuclease HII [rnhB]. 20 199 38.06 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 vfu_A01083 4473970c684e8f6c6829caa4837a370a 206 Gene3D G3DSA:3.30.420.10 6 206 9.4E-79 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A01083 4473970c684e8f6c6829caa4837a370a 206 Pfam PF01351 Ribonuclease HII 22 197 2.8E-38 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain vfu_A01083 4473970c684e8f6c6829caa4837a370a 206 SUPERFAMILY SSF53098 15 204 3.34E-70 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A03063 d23a1bc5854a9c069a79e9ec06637c79 349 SUPERFAMILY SSF53807 14 314 3.89E-59 T 12-10-2018 vfu_A03063 d23a1bc5854a9c069a79e9ec06637c79 349 Gene3D G3DSA:3.40.50.1980 178 337 3.4E-60 T 12-10-2018 vfu_A03063 d23a1bc5854a9c069a79e9ec06637c79 349 Pfam PF01497 Periplasmic binding protein 33 286 8.9E-34 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_A03063 d23a1bc5854a9c069a79e9ec06637c79 349 Gene3D G3DSA:3.40.50.1980 13 177 4.8E-44 T 12-10-2018 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 Pfam PF00455 DeoR C terminal sensor domain 75 233 4.7E-53 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 SUPERFAMILY SSF100950 76 234 8.76E-28 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-12 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 SMART SM01134 72 234 9.2E-69 T 12-10-2018 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.0E-23 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 SUPERFAMILY SSF46785 5 72 9.72E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 SMART SM00420 6 58 4.1E-27 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 Gene3D G3DSA:1.10.10.10 1 69 8.5E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 vfu_B01269 ee1446fe6a000615e85936db8b999d1f 253 Gene3D G3DSA:3.30.750.70 70 135 2.0E-7 T 12-10-2018 vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 SUPERFAMILY SSF55874 420 553 5.07E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 Gene3D G3DSA:3.30.450.40 227 352 2.4E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 Gene3D G3DSA:3.30.565.10 419 555 9.7E-12 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 Gene3D G3DSA:1.10.1760.20 40 202 4.9E-5 T 12-10-2018 vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 Pfam PF13492 GAF domain 242 351 9.0E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 Pfam PF06580 Histidine kinase 366 444 1.4E-27 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 SUPERFAMILY SSF55781 227 351 3.08E-8 T 12-10-2018 vfu_A00992 742a456b4631d6d6a76a2ae53683843c 558 Pfam PF07694 5TMR of 5TMR-LYT 25 194 5.3E-60 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 Gene3D G3DSA:1.10.10.60 130 237 9.2E-31 T 12-10-2018 vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 SUPERFAMILY SSF46689 187 235 3.05E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 Pfam PF12833 Helix-turn-helix domain 157 234 2.0E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 Pfam PF07883 Cupin domain 13 68 1.8E-7 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 SMART SM00342 151 234 1.5E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 Gene3D G3DSA:2.60.120.10 9 102 6.3E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 SUPERFAMILY SSF46689 134 185 9.41E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01118 90ecd59a1f3e34e04e192b4b75058ccb 239 SUPERFAMILY SSF51182 15 160 2.5E-9 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B00781 0227a7b08e0cbc5eadf21089330acbf2 405 Gene3D G3DSA:1.25.40.590 52 206 8.2E-35 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily vfu_B00781 0227a7b08e0cbc5eadf21089330acbf2 405 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 54 261 4.6E-39 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU vfu_B00781 0227a7b08e0cbc5eadf21089330acbf2 405 Pfam PF05036 Sporulation related domain 332 399 6.1E-10 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 vfu_B00781 0227a7b08e0cbc5eadf21089330acbf2 405 Gene3D G3DSA:3.30.70.1070 326 404 1.2E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_B00781 0227a7b08e0cbc5eadf21089330acbf2 405 SUPERFAMILY SSF110997 331 401 5.1E-10 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_B00781 0227a7b08e0cbc5eadf21089330acbf2 405 Pfam PF09850 Type VI secretion system protein DotU 56 260 6.1E-45 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU vfu_A00867 4765c3599760c09f1566dd78be5aab4f 246 Pfam PF07072 Cell division protein 18 224 4.4E-75 T 12-10-2018 IPR009777 Cell division protein ZapD vfu_A00867 4765c3599760c09f1566dd78be5aab4f 246 SUPERFAMILY SSF160950 1 245 1.57E-90 T 12-10-2018 IPR036268 ZapD domain superfamily vfu_A00867 4765c3599760c09f1566dd78be5aab4f 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.275 T 12-10-2018 IPR009777 Cell division protein ZapD vfu_A00867 4765c3599760c09f1566dd78be5aab4f 246 Gene3D G3DSA:1.10.3900.10 12 178 1.6E-82 T 12-10-2018 vfu_A00867 4765c3599760c09f1566dd78be5aab4f 246 Gene3D G3DSA:2.60.440.10 6 245 1.6E-82 T 12-10-2018 IPR027462 Z ring-associated protein D, C-terminal vfu_A01167 618fa888bbe28d4f022185f36499cfaf 95 Pfam PF09904 Winged helix-turn helix 4 91 7.2E-38 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 vfu_A01167 618fa888bbe28d4f022185f36499cfaf 95 PIRSF PIRSF037266 1 94 7.8E-41 T 12-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 vfu_A01167 618fa888bbe28d4f022185f36499cfaf 95 Gene3D G3DSA:1.10.10.10 2 95 1.3E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01652 ec801e6910e1ae804e2551ed4cf00f76 301 SMART SM01131 178 300 2.2E-33 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 vfu_A01652 ec801e6910e1ae804e2551ed4cf00f76 301 Gene3D G3DSA:3.10.310.20 188 300 5.6E-22 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 vfu_A01652 ec801e6910e1ae804e2551ed4cf00f76 301 Pfam PF02833 DHHA2 domain 181 297 2.3E-13 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 vfu_A01652 ec801e6910e1ae804e2551ed4cf00f76 301 SUPERFAMILY SSF64182 1 298 5.49E-66 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily vfu_A01652 ec801e6910e1ae804e2551ed4cf00f76 301 Pfam PF01368 DHH family 2 142 2.7E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 vfu_A01652 ec801e6910e1ae804e2551ed4cf00f76 301 Gene3D G3DSA:3.90.1640.10 1 186 3.2E-63 T 12-10-2018 vfu_A01502 71cbb8035a927a607d31ace7fadb55ea 715 Pfam PF00593 TonB dependent receptor 246 713 9.0E-61 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A01502 71cbb8035a927a607d31ace7fadb55ea 715 SUPERFAMILY SSF56935 27 715 8.7E-137 T 12-10-2018 vfu_A01502 71cbb8035a927a607d31ace7fadb55ea 715 Gene3D G3DSA:2.170.130.10 36 167 4.8E-31 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_A01502 71cbb8035a927a607d31ace7fadb55ea 715 Gene3D G3DSA:2.40.170.20 169 715 5.2E-141 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A01502 71cbb8035a927a607d31ace7fadb55ea 715 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 59 715 2.6E-120 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_A01502 71cbb8035a927a607d31ace7fadb55ea 715 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 160 1.5E-15 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_A02385 58c24f41404cc74e4cbe34e122f6ea11 247 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 3.9E-118 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 vfu_A02385 58c24f41404cc74e4cbe34e122f6ea11 247 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 47.666 T 12-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 vfu_A02385 58c24f41404cc74e4cbe34e122f6ea11 247 Pfam PF02348 Cytidylyltransferase 5 220 1.4E-68 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 vfu_A02385 58c24f41404cc74e4cbe34e122f6ea11 247 SUPERFAMILY SSF53448 1 245 1.15E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A02385 58c24f41404cc74e4cbe34e122f6ea11 247 Gene3D G3DSA:3.90.550.10 1 247 1.2E-98 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01471 4503cc23c7520c38a00486209224a13d 354 SUPERFAMILY SSF51569 7 343 2.2E-119 T 12-10-2018 vfu_A01471 4503cc23c7520c38a00486209224a13d 354 Pfam PF00793 DAHP synthetase I family 39 335 1.2E-86 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A01471 4503cc23c7520c38a00486209224a13d 354 Gene3D G3DSA:3.20.20.70 3 345 5.2E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01471 4503cc23c7520c38a00486209224a13d 354 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 343 3.2E-135 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_A01471 4503cc23c7520c38a00486209224a13d 354 PIRSF PIRSF001361 2 349 3.9E-145 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 1.8E-29 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 PIRSF PIRSF002599 1 69 3.6E-23 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 SMART SM00357 6 69 3.5E-31 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 PRINTS PR00050 Cold shock protein signature 7 22 1.5E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 PRINTS PR00050 Cold shock protein signature 42 60 1.5E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 PRINTS PR00050 Cold shock protein signature 27 36 1.5E-17 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 Gene3D G3DSA:2.40.50.140 5 68 4.7E-29 T 12-10-2018 vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 12-10-2018 IPR019844 Cold-shock conserved site vfu_B00679 93d86db25868726153f6fb4d9f60c93e 69 SUPERFAMILY SSF50249 3 68 2.45E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_B00415 da3063c31ae6bf9dab7769e1b3d170e2 250 Gene3D G3DSA:1.10.1060.10 5 95 2.9E-8 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B00415 da3063c31ae6bf9dab7769e1b3d170e2 250 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 12 250 1.8E-134 T 12-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 vfu_B00415 da3063c31ae6bf9dab7769e1b3d170e2 250 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B00415 da3063c31ae6bf9dab7769e1b3d170e2 250 Pfam PF02754 Cysteine-rich domain 175 241 2.4E-12 T 12-10-2018 IPR004017 Cysteine-rich domain vfu_B00415 da3063c31ae6bf9dab7769e1b3d170e2 250 Pfam PF13183 4Fe-4S dicluster domain 15 79 3.1E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00415 da3063c31ae6bf9dab7769e1b3d170e2 250 SUPERFAMILY SSF46548 13 91 2.38E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 SUPERFAMILY SSF53383 115 454 1.65E-68 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 Gene3D G3DSA:1.10.10.10 1 67 5.9E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 SUPERFAMILY SSF46785 2 70 1.71E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 Gene3D G3DSA:3.90.1150.10 114 452 2.3E-71 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 SMART SM00345 7 66 5.8E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.3E-9 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 Pfam PF00155 Aminotransferase class I and II 118 433 1.3E-21 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B01121 05fdc4fdce76d1c3a8e1ddc5f5c5ddd9 458 Gene3D G3DSA:3.40.640.10 134 348 2.3E-71 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 SMART SM00382 37 179 9.5E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:1.20.272.10 242 361 6.2E-41 T 12-10-2018 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 360 3.9E-31 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 483 557 1.4E-22 T 12-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 SUPERFAMILY SSF48019 243 361 2.47E-33 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:1.10.8.60 8 239 8.2E-102 T 12-10-2018 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:3.40.50.300 13 177 8.2E-102 T 12-10-2018 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 559 697 1.3E-49 T 12-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 4.3E-133 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 SUPERFAMILY SSF52540 32 222 1.0E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Gene3D G3DSA:3.30.300.150 557 682 7.5E-40 T 12-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A02545 ca7e0014970132f452796e8087c01aac 700 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.5E-44 T 12-10-2018 vfu_A01260 9a729cd24bf6e0edccd5a3e7df380c9d 164 SMART SM00260 16 153 9.2E-50 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01260 9a729cd24bf6e0edccd5a3e7df380c9d 164 Pfam PF01584 CheW-like domain 20 156 4.3E-40 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01260 9a729cd24bf6e0edccd5a3e7df380c9d 164 Gene3D G3DSA:2.30.30.40 22 147 6.6E-43 T 12-10-2018 vfu_A01260 9a729cd24bf6e0edccd5a3e7df380c9d 164 Gene3D G3DSA:2.40.50.180 39 148 6.6E-43 T 12-10-2018 vfu_A01260 9a729cd24bf6e0edccd5a3e7df380c9d 164 SUPERFAMILY SSF50341 14 158 1.02E-41 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_B00235 6e6356282074ff014881ed3eb6dee2a3 150 Pfam PF03061 Thioesterase superfamily 52 128 9.9E-15 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 vfu_B00235 6e6356282074ff014881ed3eb6dee2a3 150 Gene3D G3DSA:3.10.129.10 1 146 1.2E-57 T 12-10-2018 vfu_B00235 6e6356282074ff014881ed3eb6dee2a3 150 SUPERFAMILY SSF54637 1 139 1.13E-30 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_B00235 6e6356282074ff014881ed3eb6dee2a3 150 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 6.9E-37 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 vfu_A02424 cdb8224e8f5fc26b965f9a39dc0307cc 204 Pfam PF02224 Cytidylate kinase 2 199 4.1E-68 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 vfu_A02424 cdb8224e8f5fc26b965f9a39dc0307cc 204 SUPERFAMILY SSF52540 2 201 3.2E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02424 cdb8224e8f5fc26b965f9a39dc0307cc 204 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 197 6.7E-75 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 vfu_A02424 cdb8224e8f5fc26b965f9a39dc0307cc 204 Hamap MF_00238 Cytidylate kinase [cmk]. 1 202 27.594 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 vfu_A02424 cdb8224e8f5fc26b965f9a39dc0307cc 204 Gene3D G3DSA:3.40.50.300 1 204 7.5E-72 T 12-10-2018 vfu_B00441 8d3fadc2ce5da4b1580647582daf64b3 270 Gene3D G3DSA:1.20.1080.10 1 250 7.5E-66 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_B00441 8d3fadc2ce5da4b1580647582daf64b3 270 Pfam PF01226 Formate/nitrite transporter 8 257 1.1E-61 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 362 1.7E-163 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 SUPERFAMILY SSF53383 3 362 1.21E-86 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 PIRSF PIRSF000524 1 366 7.1E-58 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 Pfam PF00266 Aminotransferase class-V 36 309 9.9E-29 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 Gene3D G3DSA:3.40.640.10 16 262 3.8E-120 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 368 211.407 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 364 9.7E-195 T 12-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 vfu_B00116 78f864f209f63d894f5f0b26f6c19c5f 368 Gene3D G3DSA:3.90.1150.10 8 353 3.8E-120 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 12 215 9.2E-27 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 Gene3D G3DSA:3.40.50.1860 99 208 3.7E-82 T 12-10-2018 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 Gene3D G3DSA:3.40.50.1860 11 236 3.7E-82 T 12-10-2018 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 228 1.2E-67 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 SUPERFAMILY SSF53681 9 108 3.66E-29 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 Hamap MF_00258 Glutamate racemase [murI]. 7 255 32.868 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A00488 e9a6e36be815c3a657b8260b3aa87f2b 267 SUPERFAMILY SSF53681 112 257 3.27E-33 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 SUPERFAMILY SSF51569 3 283 2.34E-100 T 12-10-2018 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 PIRSF PIRSF001359 1 284 5.3E-110 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 Gene3D G3DSA:3.20.20.70 1 287 2.3E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 1.0E-146 T 12-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 3.9E-99 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_A02324 9f59d6d4e66342f1df01ab3649bed7c2 287 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 9.3E-102 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 vfu_B01150 aad606992a01948a23231f0455272888 366 Gene3D G3DSA:3.20.20.70 1 365 1.0E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B01150 aad606992a01948a23231f0455272888 366 SUPERFAMILY SSF51395 3 364 2.6E-125 T 12-10-2018 vfu_B01150 aad606992a01948a23231f0455272888 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 1.7E-94 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 vfu_A00231 fe0d21d4d24b1110cbc38fc89e3eaded 680 Gene3D G3DSA:1.10.1370.40 13 675 9.7E-269 T 12-10-2018 vfu_A00231 fe0d21d4d24b1110cbc38fc89e3eaded 680 Pfam PF01432 Peptidase family M3 222 677 8.2E-163 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 vfu_A00231 fe0d21d4d24b1110cbc38fc89e3eaded 680 SUPERFAMILY SSF55486 1 677 1.14E-209 T 12-10-2018 vfu_A00231 fe0d21d4d24b1110cbc38fc89e3eaded 680 Gene3D G3DSA:1.10.1370.10 140 610 9.7E-269 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 SUPERFAMILY SSF118116 463 647 3.66E-39 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 2.8E-103 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 SMART SM01340 212 330 1.9E-58 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 SUPERFAMILY SSF55874 1 204 2.23E-55 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 SMART SM00853 467 608 1.1E-16 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Gene3D G3DSA:3.30.565.10 1 216 4.4E-72 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 647 25.668 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Gene3D G3DSA:2.30.42.20 464 646 1.8E-54 T 12-10-2018 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Gene3D G3DSA:3.30.1370.100 508 602 1.8E-54 T 12-10-2018 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Pfam PF08676 MutL C terminal dimerisation domain 464 600 1.6E-28 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 SUPERFAMILY SSF54211 191 330 1.67E-38 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 1.7E-11 T 12-10-2018 vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Gene3D G3DSA:3.30.230.10 217 329 1.2E-39 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A00017 2406078e4b0f8515a8227e7d06366cf8 649 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 5.8E-40 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 vfu_A00881 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF51230 102 194 5.89E-23 T 12-10-2018 IPR011053 Single hybrid motif vfu_A00881 001b69fefeea147cd5670c0613544191 630 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 182 630 2.2E-206 T 12-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 vfu_A00881 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:4.10.320.10 322 367 8.9E-21 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF51230 1 91 2.36E-22 T 12-10-2018 IPR011053 Single hybrid motif vfu_A00881 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF52777 388 629 5.78E-81 T 12-10-2018 vfu_A00881 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF47005 316 361 5.36E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 225 254 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:3.30.559.10 383 630 5.6E-96 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 125 154 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 SUPERFAMILY SSF51230 203 294 3.01E-22 T 12-10-2018 IPR011053 Single hybrid motif vfu_A00881 001b69fefeea147cd5670c0613544191 630 Pfam PF02817 e3 binding domain 323 357 3.3E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 vfu_A00881 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:2.40.50.100 1 80 5.6E-20 T 12-10-2018 vfu_A00881 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:2.40.50.100 202 279 1.6E-19 T 12-10-2018 vfu_A00881 001b69fefeea147cd5670c0613544191 630 Gene3D G3DSA:2.40.50.100 102 179 3.9E-20 T 12-10-2018 vfu_A00881 001b69fefeea147cd5670c0613544191 630 Pfam PF00364 Biotin-requiring enzyme 203 273 6.8E-20 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_A00881 001b69fefeea147cd5670c0613544191 630 Pfam PF00364 Biotin-requiring enzyme 103 173 2.7E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_A00881 001b69fefeea147cd5670c0613544191 630 Pfam PF00364 Biotin-requiring enzyme 4 73 1.6E-19 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_A00881 001b69fefeea147cd5670c0613544191 630 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 399 629 2.3E-79 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 vfu_A00196 70cb17f53ed5602cfa556845afb895cb 177 SUPERFAMILY SSF46626 9 91 1.21E-8 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00196 70cb17f53ed5602cfa556845afb895cb 177 Gene3D G3DSA:1.10.760.10 2 95 1.6E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 Gene3D G3DSA:3.90.79.10 1 159 1.2E-50 T 12-10-2018 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 SUPERFAMILY SSF55811 6 152 8.67E-32 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.4E-8 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 Pfam PF00293 NUDIX domain 7 145 1.8E-26 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A00969 dbe0642823c0fabb8d2e4de02810d614 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.489 T 12-10-2018 IPR022927 RNA pyrophosphohydrolase RppH vfu_A01062 6e2f9a518a1b62cc73626325b4c47ef3 156 Gene3D G3DSA:3.40.50.960 1 156 3.0E-63 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01062 6e2f9a518a1b62cc73626325b4c47ef3 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 5.1E-54 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01062 6e2f9a518a1b62cc73626325b4c47ef3 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 30.929 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01062 6e2f9a518a1b62cc73626325b4c47ef3 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 3.5E-56 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01062 6e2f9a518a1b62cc73626325b4c47ef3 156 SUPERFAMILY SSF52121 4 154 6.15E-59 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A00514 416cc838671b482747a393aa1572e479 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.4E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00514 416cc838671b482747a393aa1572e479 147 Gene3D G3DSA:3.30.700.10 33 141 2.2E-44 T 12-10-2018 vfu_A00514 416cc838671b482747a393aa1572e479 147 SUPERFAMILY SSF54523 36 142 1.1E-37 T 12-10-2018 vfu_A00514 416cc838671b482747a393aa1572e479 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 vfu_A00514 416cc838671b482747a393aa1572e479 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 4.2E-22 T 12-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 vfu_A00514 416cc838671b482747a393aa1572e479 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 31 3.9E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00514 416cc838671b482747a393aa1572e479 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 142 1.3E-57 T 12-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 vfu_A00514 416cc838671b482747a393aa1572e479 147 Pfam PF08334 Type II secretion system (T2SS), protein G 33 141 2.2E-42 T 12-10-2018 IPR013545 Type II secretion system protein G vfu_A00514 416cc838671b482747a393aa1572e479 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 255 28.749 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 Pfam PF02110 Hydroxyethylthiazole kinase family 12 251 1.4E-70 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 3.1E-31 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 3.1E-31 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 3.1E-31 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 3.1E-31 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 3.1E-31 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 3.1E-31 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 PIRSF PIRSF000513 5 263 1.5E-88 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 Gene3D G3DSA:3.40.1190.20 1 265 1.0E-86 T 12-10-2018 IPR029056 Ribokinase-like vfu_A01490 e3ddd0f8ac5ed2052c43fd33c2667197 268 SUPERFAMILY SSF53613 6 259 4.75E-56 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00363 22c8701389f020c756ba5992f1959ec2 105 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 24.209 T 12-10-2018 IPR007458 Protein of unknown function DUF496 vfu_B00363 22c8701389f020c756ba5992f1959ec2 105 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 75 4.0E-31 T 12-10-2018 IPR007458 Protein of unknown function DUF496 vfu_B00363 22c8701389f020c756ba5992f1959ec2 105 Pfam PF04363 Protein of unknown function (DUF496) 1 92 1.1E-42 T 12-10-2018 IPR007458 Protein of unknown function DUF496 vfu_B00363 22c8701389f020c756ba5992f1959ec2 105 PIRSF PIRSF028773 1 104 3.0E-46 T 12-10-2018 IPR007458 Protein of unknown function DUF496 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 78 86 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 Hamap MF_00152 Probable endonuclease 4 [nfo]. 11 288 43.054 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 12 285 2.0E-106 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 Gene3D G3DSA:3.20.20.150 10 291 5.7E-113 T 12-10-2018 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 SMART SM00518 12 288 4.8E-120 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 Pfam PF01261 Xylose isomerase-like TIM barrel 29 248 6.1E-44 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 SUPERFAMILY SSF51658 12 288 8.77E-102 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 224 240 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 vfu_A02893 63c2b9ecf01638e895d4efa015d36ae8 292 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 184 191 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 vfu_A00084 ad66fa55e5cc07fceb98645583e5ca9a 230 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 3.0E-5 T 12-10-2018 IPR012640 Membrane lipoprotein, lipid attachment site vfu_A00084 ad66fa55e5cc07fceb98645583e5ca9a 230 PIRSF PIRSF028160 1 230 1.9E-102 T 12-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 vfu_A00084 ad66fa55e5cc07fceb98645583e5ca9a 230 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 1.1E-60 T 12-10-2018 IPR010858 Protein of unknown function DUF1481 vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 Pfam PF05235 CHAD domain 230 396 7.1E-10 T 12-10-2018 IPR007899 CHAD domain vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 Pfam PF01928 CYTH domain 3 197 1.5E-32 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 Gene3D G3DSA:1.40.20.10 211 410 1.9E-13 T 12-10-2018 IPR038186 CHAD domain superfamily vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 SMART SM01118 2 203 1.2E-40 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 SUPERFAMILY SSF55154 1 214 1.16E-51 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 Gene3D G3DSA:2.40.320.10 1 200 1.3E-34 T 12-10-2018 vfu_A00853 807aabc3dbecaff1f70a9d3aa4c67d13 505 SMART SM00880 229 497 4.2E-21 T 12-10-2018 IPR007899 CHAD domain vfu_A00317 2d92407082ae5b02b586e97e41b1f907 45 Pfam PF00468 Ribosomal protein L34 3 44 1.2E-23 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00317 2d92407082ae5b02b586e97e41b1f907 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.276 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00317 2d92407082ae5b02b586e97e41b1f907 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 3.1E-25 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00317 2d92407082ae5b02b586e97e41b1f907 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 6.0E-15 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00317 2d92407082ae5b02b586e97e41b1f907 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 91 512 3.0E-135 T 12-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 Gene3D G3DSA:2.60.120.560 411 539 5.2E-20 T 12-10-2018 vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 98 111 - T 12-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 98 398 3.9E-89 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 SMART SM00640 98 502 5.0E-119 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 Gene3D G3DSA:2.115.10.20 64 410 2.1E-96 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 SUPERFAMILY SSF49899 401 534 3.01E-22 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 SUPERFAMILY SSF75005 91 398 9.89E-89 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_A01507 b0a00b85e39127b43194495db9daa7cb 543 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 420 531 2.1E-17 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal vfu_A01795 3f2156b31b7987b264eba93c045224e2 157 SMART SM00448 4 125 4.8E-12 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01795 3f2156b31b7987b264eba93c045224e2 157 Pfam PF00072 Response regulator receiver domain 6 125 9.3E-14 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01795 3f2156b31b7987b264eba93c045224e2 157 Gene3D G3DSA:3.40.50.2300 1 136 2.9E-19 T 12-10-2018 vfu_A01795 3f2156b31b7987b264eba93c045224e2 157 SUPERFAMILY SSF52172 1 132 4.13E-20 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02850 6fa651e6ea39e214779210ae694c2465 356 TIGRFAM TIGR00937 2A51: chromate efflux transporter 1 350 1.1E-74 T 12-10-2018 IPR014047 Chromate transporter, long chain vfu_A02850 6fa651e6ea39e214779210ae694c2465 356 PIRSF PIRSF004810 1 356 7.2E-97 T 12-10-2018 IPR014047 Chromate transporter, long chain vfu_A02850 6fa651e6ea39e214779210ae694c2465 356 Pfam PF02417 Chromate transporter 1 138 7.7E-24 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 vfu_A02850 6fa651e6ea39e214779210ae694c2465 356 Pfam PF02417 Chromate transporter 187 350 7.7E-32 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 vfu_A00934 d53deb3b7c0361d273b2d71fddc6267d 227 SUPERFAMILY SSF140990 2 171 8.11E-63 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 vfu_A00934 d53deb3b7c0361d273b2d71fddc6267d 227 Gene3D G3DSA:1.20.58.760 1 179 2.8E-60 T 12-10-2018 vfu_A00934 d53deb3b7c0361d273b2d71fddc6267d 227 Pfam PF01434 Peptidase family M41 2 167 5.2E-60 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 vfu_A02193 3f68868398deb393008f7e7034af4dab 235 Pfam PF02698 DUF218 domain 39 175 3.2E-19 T 12-10-2018 IPR003848 Domain of unknown function DUF218 vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 157 1.1E-21 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 SUPERFAMILY SSF52833 41 161 2.19E-14 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 Gene3D G3DSA:1.20.1050.10 178 318 4.1E-57 T 12-10-2018 vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 SUPERFAMILY SSF47616 164 298 2.78E-28 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 276 8.7E-12 T 12-10-2018 vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 PIRSF PIRSF015753 4 318 3.7E-120 T 12-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 vfu_B01482 1ccf62550e9e02e4fdb0de04cd716bf4 319 Gene3D G3DSA:3.40.30.130 1 175 1.8E-68 T 12-10-2018 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 SMART SM00448 1 89 3.8E-8 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 Pfam PF00072 Response regulator receiver domain 2 90 1.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 177 3.3E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 165 1.6E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 123 137 1.6E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 153 1.6E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 ProSitePatterns PS00622 LuxR-type HTH domain signature. 137 164 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 SUPERFAMILY SSF52172 3 106 8.68E-27 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 Gene3D G3DSA:3.40.50.12740 1 183 2.2E-50 T 12-10-2018 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 SMART SM00421 120 177 8.2E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02143 e7060236ab3db140e4e019cace0e6612 188 SUPERFAMILY SSF46894 109 184 7.14E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00471 a2ea827d0d3c8ce96e9d8acd7f3be16f 490 Gene3D G3DSA:3.60.60.10 24 350 6.4E-12 T 12-10-2018 vfu_B00471 a2ea827d0d3c8ce96e9d8acd7f3be16f 490 Pfam PF03577 Peptidase family C69 23 409 4.9E-97 T 12-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 Pfam PF04055 Radical SAM superfamily 91 252 6.9E-18 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.621 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 SUPERFAMILY SSF102114 52 316 4.97E-68 T 12-10-2018 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 PIRSF PIRSF005963 1 321 2.9E-130 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 SMART SM00729 84 293 1.4E-19 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 Gene3D G3DSA:3.20.20.70 21 293 3.9E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 2.0E-8 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A02658 d381ef96a761187b0ad908324102adb8 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 4.3E-151 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 Pfam PF06723 MreB/Mbl protein 11 338 1.8E-148 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 158 321 7.4E-132 T 12-10-2018 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 SUPERFAMILY SSF53067 154 340 3.17E-51 T 12-10-2018 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 SUPERFAMILY SSF53067 9 152 1.73E-37 T 12-10-2018 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.30.420.40 14 331 7.4E-132 T 12-10-2018 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 Gene3D G3DSA:3.90.640.10 190 263 7.4E-132 T 12-10-2018 vfu_A03101 7e132b5a07a6a78797a1024a536e3125 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 5.4E-164 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 49 245 1.0E-77 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 174 189 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 66 9.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 174 194 9.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 66 86 9.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 219 244 9.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 86 105 9.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 216 9.2E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 Pfam PF00813 FliP family 49 241 3.3E-76 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 222 234 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 45 54 1.3E-18 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 167 179 1.3E-18 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 117 131 1.3E-18 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 235 245 1.3E-18 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A02269 1f867e91db401e3118701b1124a262b6 249 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 105 117 1.3E-18 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 Gene3D G3DSA:1.10.246.130 230 335 1.7E-9 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 SUPERFAMILY SSF56235 4 517 4.3E-138 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 Pfam PF01019 Gamma-glutamyltranspeptidase 20 515 8.8E-124 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 97 115 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 334 352 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 214 230 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 389 404 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 116 135 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 27 52 2.3E-20 T 12-10-2018 vfu_B00178 ab7bbc021c2505d09ffabacedb0c98ec 521 Gene3D G3DSA:3.60.20.40 336 518 2.5E-57 T 12-10-2018 vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 Gene3D G3DSA:3.40.50.300 211 371 7.2E-47 T 12-10-2018 vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 Gene3D G3DSA:3.30.70.330 386 460 1.0E-18 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 SUPERFAMILY SSF52540 73 359 9.22E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 3.1E-47 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 SMART SM00487 23 220 7.7E-56 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 Pfam PF03880 DbpA RNA binding domain 387 457 5.6E-22 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 SMART SM00490 257 338 1.8E-29 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 Gene3D G3DSA:3.40.50.300 2 210 3.0E-74 T 12-10-2018 vfu_A00697 8fdcc020923e065c0b22b9c480ad7cc1 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 9.0E-28 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 Pfam PF03099 Biotin/lipoate A/B protein ligase family 37 137 9.0E-9 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 53 106 6.0E-23 T 12-10-2018 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 5 182 7.5E-73 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 PIRSF PIRSF016262 1 194 5.0E-59 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 SUPERFAMILY SSF55681 1 184 3.31E-66 T 12-10-2018 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 Hamap MF_00013 Octanoyltransferase [lipB]. 1 184 34.345 T 12-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 Gene3D G3DSA:3.30.930.10 1 181 3.2E-59 T 12-10-2018 vfu_A02657 65089c35c00ebd513cec2e12e65ba3da 197 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 49 64 - T 12-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 vfu_A00281 98eef6be47d1a24578092f748b83ffba 88 Gene3D G3DSA:1.10.1580.20 1 88 7.2E-43 T 12-10-2018 IPR038134 YihD-like superfamily vfu_A00281 98eef6be47d1a24578092f748b83ffba 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 5.2E-44 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 vfu_A00281 98eef6be47d1a24578092f748b83ffba 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 3.0E-35 T 12-10-2018 IPR009383 Protein of unknown function DUF1040 vfu_B00254 1e53f293b8eef0e8873cb234bd28955a 104 Pfam PF07883 Cupin domain 44 100 1.2E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B00254 1e53f293b8eef0e8873cb234bd28955a 104 Gene3D G3DSA:2.60.120.10 13 104 1.4E-35 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00254 1e53f293b8eef0e8873cb234bd28955a 104 SUPERFAMILY SSF51182 3 104 2.96E-19 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A01579 f5312cda4b05e99408945f62de5dc63c 414 Pfam PF02353 Mycolic acid cyclopropane synthetase 139 406 2.6E-81 T 12-10-2018 vfu_A01579 f5312cda4b05e99408945f62de5dc63c 414 SUPERFAMILY SSF53335 57 365 2.76E-85 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01579 f5312cda4b05e99408945f62de5dc63c 414 PIRSF PIRSF003085 13 414 1.5E-122 T 12-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 vfu_A01579 f5312cda4b05e99408945f62de5dc63c 414 Gene3D G3DSA:3.40.50.150 144 414 3.4E-100 T 12-10-2018 vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 Gene3D G3DSA:3.40.50.1000 2 185 2.4E-60 T 12-10-2018 IPR023214 HAD superfamily vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 Pfam PF13242 HAD-hyrolase-like 107 176 6.3E-12 T 12-10-2018 vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 2.4E-36 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 PIRSF PIRSF004682 1 184 5.1E-63 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 2.2E-79 T 12-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 SUPERFAMILY SSF56784 4 181 4.35E-48 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A02674 c0d7c51cde41452e4f2a8aa2d5a9652d 185 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 4.1E-39 T 12-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 vfu_A01729 a75be42ce1241944212f2e1718840721 338 Gene3D G3DSA:3.40.190.170 26 338 1.6E-100 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_A01729 a75be42ce1241944212f2e1718840721 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 316 2.0E-45 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_A01940 4635789134c2584e8bd4b968ccdaa997 418 Pfam PF04403 Paraquat-inducible protein A 251 406 4.6E-47 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like vfu_A01940 4635789134c2584e8bd4b968ccdaa997 418 Pfam PF04403 Paraquat-inducible protein A 56 207 1.3E-37 T 12-10-2018 IPR007498 Intermembrane transport protein PqiA-like vfu_A01940 4635789134c2584e8bd4b968ccdaa997 418 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 7 404 1.0E-106 T 12-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type vfu_A02752 204260245814f05e03a8b03e3851a5d4 171 Pfam PF00419 Fimbrial protein 27 171 6.1E-14 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 vfu_A02752 204260245814f05e03a8b03e3851a5d4 171 Gene3D G3DSA:2.60.40.1090 24 171 2.1E-31 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_A02752 204260245814f05e03a8b03e3851a5d4 171 SUPERFAMILY SSF49401 25 171 3.38E-32 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 SUPERFAMILY SSF116734 218 436 6.05E-39 T 12-10-2018 vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 SUPERFAMILY SSF116734 7 219 1.01E-37 T 12-10-2018 vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 Gene3D G3DSA:1.10.287.1120 166 427 3.0E-73 T 12-10-2018 vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 Gene3D G3DSA:3.90.220.20 19 431 3.0E-73 T 12-10-2018 vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 Pfam PF01420 Type I restriction modification DNA specificity domain 260 392 6.8E-10 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 Pfam PF01420 Type I restriction modification DNA specificity domain 50 196 1.7E-5 T 12-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 vfu_A02740 8dff77d09a2eef1c8452b4889f9b1c45 449 Gene3D G3DSA:3.90.220.20 238 380 3.0E-73 T 12-10-2018 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 6.8E-119 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 SUPERFAMILY SSF51735 1 173 8.56E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00452 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.2E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.2E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.2E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.2E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.2E-28 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 SMART SM00846 3 152 1.0E-69 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 Gene3D G3DSA:3.40.50.720 4 327 9.5E-126 T 12-10-2018 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 PIRSF PIRSF000149 1 333 7.2E-116 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 SUPERFAMILY SSF55347 152 314 1.31E-63 T 12-10-2018 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 4.7E-31 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.4E-59 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00452 acee184a2b3e76454787111c39ee6985 334 Gene3D G3DSA:3.30.360.10 151 315 9.5E-126 T 12-10-2018 vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 Pfam PF00005 ABC transporter 355 480 2.4E-14 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 SUPERFAMILY SSF52540 4 232 9.5E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 SMART SM00382 360 526 4.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 SMART SM00382 28 352 1.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 SUPERFAMILY SSF52540 353 520 2.5E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 Gene3D G3DSA:3.40.50.300 3 268 2.7E-39 T 12-10-2018 vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 Gene3D G3DSA:3.40.50.300 287 528 3.6E-33 T 12-10-2018 vfu_B01510 37cb18f1775e3f86bbdde23450d6fb88 531 Pfam PF00005 ABC transporter 29 170 3.3E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00621 41ade7229869a202e0f71a0db3b56596 263 Gene3D G3DSA:3.40.1160.10 4 260 1.4E-65 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A00621 41ade7229869a202e0f71a0db3b56596 263 PIRSF PIRSF000728 1 263 2.3E-69 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00621 41ade7229869a202e0f71a0db3b56596 263 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.955 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00621 41ade7229869a202e0f71a0db3b56596 263 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.7E-65 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A00621 41ade7229869a202e0f71a0db3b56596 263 Pfam PF00696 Amino acid kinase family 9 238 3.1E-35 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A00621 41ade7229869a202e0f71a0db3b56596 263 SUPERFAMILY SSF53633 6 262 5.24E-58 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_B00555 63a84089a34d1708e62734dee441171f 221 Gene3D G3DSA:1.10.3810.10 44 220 2.1E-53 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_B00555 63a84089a34d1708e62734dee441171f 221 Pfam PF00912 Transglycosylase 47 214 7.3E-52 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_B00555 63a84089a34d1708e62734dee441171f 221 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 3 216 2.2E-63 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_B00555 63a84089a34d1708e62734dee441171f 221 SUPERFAMILY SSF53955 47 218 3.09E-58 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_B00555 63a84089a34d1708e62734dee441171f 221 Hamap MF_00766 Biosynthetic peptidoglycan transglycosylase [mtgA]. 3 219 36.842 T 12-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 30 80 8.8E-21 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 Gene3D G3DSA:1.20.5.1030 25 81 2.3E-17 T 12-10-2018 IPR038379 SecE superfamily vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 30 58 - T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 30 80 1.9E-17 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 Hamap MF_00422 Protein translocase subunit SecE [secE]. 26 80 13.395 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 PRINTS PR01650 Bacterial translocase SecE signature 3 24 1.5E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 PRINTS PR01650 Bacterial translocase SecE signature 48 68 1.5E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 PRINTS PR01650 Bacterial translocase SecE signature 68 84 1.5E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 vfu_A00044 a3717bcad35f252c7561a7f9a64241ad 84 PRINTS PR01650 Bacterial translocase SecE signature 24 44 1.5E-41 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.3E-22 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:2.40.40.20 649 813 2.8E-46 T 12-10-2018 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.90.55.10 82 615 1.6E-240 T 12-10-2018 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 SUPERFAMILY SSF53706 44 660 1.15E-165 T 12-10-2018 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 3.5E-79 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.40.228.10 179 641 1.6E-240 T 12-10-2018 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 12-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 SUPERFAMILY SSF50692 669 817 4.75E-41 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 3.6E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_A01648 2492503dedba3e40cd9ab88ac66f81c6 820 Gene3D G3DSA:3.40.50.740 87 569 1.6E-240 T 12-10-2018 vfu_A00035 452d831fa3584473343227c4e4c04516 261 SUPERFAMILY SSF55811 58 245 8.12E-43 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A00035 452d831fa3584473343227c4e4c04516 261 PRINTS PR00502 NUDIX hydrolase family signature 170 185 7.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A00035 452d831fa3584473343227c4e4c04516 261 PRINTS PR00502 NUDIX hydrolase family signature 156 170 7.0E-5 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A00035 452d831fa3584473343227c4e4c04516 261 ProSitePatterns PS00893 Nudix box signature. 161 182 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_A00035 452d831fa3584473343227c4e4c04516 261 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 98 126 2.2E-9 T 12-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 vfu_A00035 452d831fa3584473343227c4e4c04516 261 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 259 41.946 T 12-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 vfu_A00035 452d831fa3584473343227c4e4c04516 261 Gene3D G3DSA:3.90.79.10 128 258 1.5E-39 T 12-10-2018 vfu_A00035 452d831fa3584473343227c4e4c04516 261 Gene3D G3DSA:3.90.79.20 2 127 3.8E-33 T 12-10-2018 vfu_A00035 452d831fa3584473343227c4e4c04516 261 Pfam PF00293 NUDIX domain 134 233 1.8E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.724 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 4.3E-42 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 Gene3D G3DSA:3.30.572.10 1 283 1.0E-79 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 Pfam PF00303 Thymidylate synthase 2 283 1.9E-73 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 SUPERFAMILY SSF55831 2 283 1.83E-90 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A00973 00c2f51c00d1f34cb2286d5fdabd7bc0 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 9.7E-14 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 vfu_A03074 27fbc52d3f02fc33821ee212f94efe08 271 PIRSF PIRSF000903 1 271 5.3E-117 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 vfu_A03074 27fbc52d3f02fc33821ee212f94efe08 271 Gene3D G3DSA:3.60.21.10 2 270 2.5E-72 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_A03074 27fbc52d3f02fc33821ee212f94efe08 271 Pfam PF00149 Calcineurin-like phosphoesterase 5 159 4.4E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_A03074 27fbc52d3f02fc33821ee212f94efe08 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 48.047 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 vfu_A03074 27fbc52d3f02fc33821ee212f94efe08 271 SUPERFAMILY SSF56300 4 247 3.3E-56 T 12-10-2018 vfu_A03074 27fbc52d3f02fc33821ee212f94efe08 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 267 6.0E-113 T 12-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 vfu_A02802 a5b8541459ff127c6951d357685216f4 203 SUPERFAMILY SSF52833 1 195 2.43E-66 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02802 a5b8541459ff127c6951d357685216f4 203 Gene3D G3DSA:3.40.30.10 1 197 4.8E-72 T 12-10-2018 vfu_A02802 a5b8541459ff127c6951d357685216f4 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 7.4E-8 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_A02802 a5b8541459ff127c6951d357685216f4 203 PIRSF PIRSF000239 1 202 1.6E-58 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_A02802 a5b8541459ff127c6951d357685216f4 203 Pfam PF00578 AhpC/TSA family 4 139 2.5E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_A01698 bcdf8e4d99545e3e6027d3933b9b32f5 347 Gene3D G3DSA:2.40.160.10 23 347 1.2E-41 T 12-10-2018 IPR023614 Porin domain superfamily vfu_A01698 bcdf8e4d99545e3e6027d3933b9b32f5 347 Pfam PF13609 Gram-negative porin 16 325 5.2E-25 T 12-10-2018 vfu_A01698 bcdf8e4d99545e3e6027d3933b9b32f5 347 SUPERFAMILY SSF56935 24 347 1.5E-39 T 12-10-2018 vfu_A01500 00516bea6bd6eba163f52502b01f8ccb 511 Gene3D G3DSA:1.20.1720.10 21 258 2.3E-40 T 12-10-2018 vfu_A01500 00516bea6bd6eba163f52502b01f8ccb 511 Pfam PF07690 Major Facilitator Superfamily 24 417 2.4E-52 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01500 00516bea6bd6eba163f52502b01f8ccb 511 Gene3D G3DSA:1.20.1250.20 276 506 9.8E-12 T 12-10-2018 vfu_A01500 00516bea6bd6eba163f52502b01f8ccb 511 SUPERFAMILY SSF103473 8 502 1.1E-62 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01500 00516bea6bd6eba163f52502b01f8ccb 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 498 4.0E-128 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 SUPERFAMILY SSF47413 6 52 5.25E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 SUPERFAMILY SSF53822 79 335 1.84E-48 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 Pfam PF13377 Periplasmic binding protein-like domain 186 335 9.2E-25 T 12-10-2018 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 Gene3D G3DSA:3.40.50.2300 90 319 3.5E-45 T 12-10-2018 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 8.6E-13 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 Gene3D G3DSA:3.40.50.2300 174 297 3.5E-45 T 12-10-2018 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 Gene3D G3DSA:1.10.260.40 3 50 2.2E-13 T 12-10-2018 vfu_A02095 5b686fe66e554a91edb1d60bc360a3b5 339 SMART SM00354 4 71 4.6E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01427 2a479168f5389ee42ffbd83cd51362c5 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 6.1E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A01427 2a479168f5389ee42ffbd83cd51362c5 191 Gene3D G3DSA:1.10.357.10 1 191 2.6E-44 T 12-10-2018 vfu_A01427 2a479168f5389ee42ffbd83cd51362c5 191 SUPERFAMILY SSF46689 7 75 5.64E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01427 2a479168f5389ee42ffbd83cd51362c5 191 SUPERFAMILY SSF48498 79 188 2.89E-21 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A01427 2a479168f5389ee42ffbd83cd51362c5 191 Pfam PF16925 Bacterial transcriptional repressor C-terminal 79 184 7.5E-9 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 374 1.3E-51 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 SUPERFAMILY SSF111369 52 265 9.68E-26 T 12-10-2018 vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 Gene3D G3DSA:2.40.420.20 44 373 5.5E-94 T 12-10-2018 vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 Gene3D G3DSA:1.10.287.470 94 185 5.5E-94 T 12-10-2018 vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 Gene3D G3DSA:2.40.30.170 49 312 5.5E-94 T 12-10-2018 vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 Gene3D G3DSA:2.40.50.100 60 222 5.5E-94 T 12-10-2018 vfu_A01776 5524d5cc14629ebcd16477e624b334b8 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 264 7.2E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 Gene3D G3DSA:3.30.1330.60 64 188 2.0E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 SUPERFAMILY SSF103088 59 187 1.29E-26 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 PRINTS PR01021 OMPA domain signature 119 134 4.0E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 PRINTS PR01021 OMPA domain signature 89 111 4.0E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 PRINTS PR01021 OMPA domain signature 134 150 4.0E-6 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 Pfam PF00691 OmpA family 88 183 1.2E-17 T 12-10-2018 IPR006665 OmpA-like domain vfu_B00342 6566ea3f9ed5c1c22f815778dac9db9b 208 SUPERFAMILY SSF103647 23 75 1.44E-9 T 12-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 SUPERFAMILY SSF53335 17 374 9.88E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 Gene3D G3DSA:3.40.1350.30 52 196 4.0E-140 T 12-10-2018 vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 18 375 4.7E-188 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 337 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 18 375 1.1E-191 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 Gene3D G3DSA:3.40.50.150 20 371 4.0E-140 T 12-10-2018 vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 11 375 44.649 T 12-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 vfu_A00485 78abd1faa54f6915f5f787ae89c11430 376 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site vfu_A00745 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 SUPERFAMILY SSF82657 4 82 3.14E-27 T 12-10-2018 IPR036065 BolA-like superfamily vfu_A00745 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 PIRSF PIRSF003113 1 83 1.7E-21 T 12-10-2018 IPR002634 BolA protein vfu_A00745 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 Pfam PF01722 BolA-like protein 20 74 2.1E-13 T 12-10-2018 IPR002634 BolA protein vfu_A00745 1c2e3b3c1ace3b660b60e8aaeebc9c9b 84 Gene3D G3DSA:3.30.300.90 1 84 9.4E-33 T 12-10-2018 vfu_B01264 66f4fa431d2a98beb74f5d3bfa89aa75 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 286 1.7E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01264 66f4fa431d2a98beb74f5d3bfa89aa75 296 SUPERFAMILY SSF161098 10 296 4.06E-68 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01264 66f4fa431d2a98beb74f5d3bfa89aa75 296 Gene3D G3DSA:1.10.3720.10 1 283 1.9E-73 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02649 5b427fa1f64e4b40fc64a382d63d4cfc 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.7E-37 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS vfu_A02649 5b427fa1f64e4b40fc64a382d63d4cfc 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.091 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS vfu_A02649 5b427fa1f64e4b40fc64a382d63d4cfc 105 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 7.9E-27 T 12-10-2018 vfu_A02649 5b427fa1f64e4b40fc64a382d63d4cfc 105 Gene3D G3DSA:3.30.460.10 1 105 7.3E-36 T 12-10-2018 vfu_A02649 5b427fa1f64e4b40fc64a382d63d4cfc 105 SUPERFAMILY SSF81301 3 105 1.8E-36 T 12-10-2018 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 TIGRFAM TIGR00492 alr: alanine racemase 45 408 1.9E-73 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 Pfam PF00842 Alanine racemase, C-terminal domain 281 407 1.9E-33 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 Hamap MF_01201 Alanine racemase. 42 408 26.394 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 Gene3D G3DSA:2.40.37.10 45 404 1.8E-131 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 SUPERFAMILY SSF51419 49 283 4.45E-48 T 12-10-2018 IPR029066 PLP-binding barrel vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 SMART SM01005 280 408 5.0E-50 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 Pfam PF01168 Alanine racemase, N-terminal domain 49 272 1.2E-50 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 SUPERFAMILY SSF50621 274 408 1.01E-41 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 313 328 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 104 122 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 68 84 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 202 213 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 334 351 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 166 178 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 PRINTS PR00992 Alanine racemase signature 245 272 4.5E-33 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 Gene3D G3DSA:3.20.20.10 51 268 1.8E-131 T 12-10-2018 IPR029066 PLP-binding barrel vfu_B00460 734c4640eb4060c917054f8bd0aff606 409 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 73 83 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 SUPERFAMILY SSF48179 177 472 1.13E-125 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 4.7E-51 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 Gene3D G3DSA:3.40.50.720 1 180 3.4E-56 T 12-10-2018 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PIRSF PIRSF000109 1 477 4.9E-240 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 4.3E-125 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 SMART SM01350 179 469 3.1E-212 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 1.9E-233 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 Gene3D G3DSA:1.10.1040.10 181 434 2.1E-101 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 SUPERFAMILY SSF51735 4 174 1.1E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 3.5E-85 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 vfu_B00577 11af70ca98b31a9d07723df6dc8500d8 482 Gene3D G3DSA:1.20.5.320 435 482 3.6E-24 T 12-10-2018 vfu_A00962 96a05829b46b672a596617deeb113208 510 Gene3D G3DSA:2.40.50.140 9 155 2.0E-28 T 12-10-2018 vfu_A00962 96a05829b46b672a596617deeb113208 510 SUPERFAMILY SSF55681 161 507 1.24E-116 T 12-10-2018 vfu_A00962 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 6.9E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00962 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 6.9E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00962 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 6.9E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00962 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 6.9E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00962 96a05829b46b672a596617deeb113208 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 6.9E-39 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00962 96a05829b46b672a596617deeb113208 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 9.6E-201 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00962 96a05829b46b672a596617deeb113208 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 5.8E-8 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 vfu_A00962 96a05829b46b672a596617deeb113208 510 SUPERFAMILY SSF50249 16 154 1.2E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00962 96a05829b46b672a596617deeb113208 510 Gene3D G3DSA:3.30.930.10 156 506 1.7E-128 T 12-10-2018 vfu_A00962 96a05829b46b672a596617deeb113208 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 7.6E-78 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00962 96a05829b46b672a596617deeb113208 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.338 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 vfu_A00372 9911a2e4af1b073f1ead988b6802bd1c 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.485 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 vfu_A00372 9911a2e4af1b073f1ead988b6802bd1c 256 SUPERFAMILY SSF110399 1 236 1.01E-85 T 12-10-2018 vfu_A00372 9911a2e4af1b073f1ead988b6802bd1c 256 Gene3D G3DSA:3.20.20.70 1 253 4.9E-112 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00372 9911a2e4af1b073f1ead988b6802bd1c 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 6.2E-113 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 vfu_A02287 1a45db5ce2b53d0297462495f93836e9 151 SUPERFAMILY SSF54427 7 148 7.51E-33 T 12-10-2018 IPR032710 NTF2-like domain superfamily vfu_A02287 1a45db5ce2b53d0297462495f93836e9 151 Gene3D G3DSA:3.10.450.50 2 150 3.4E-34 T 12-10-2018 vfu_A02287 1a45db5ce2b53d0297462495f93836e9 151 Pfam PF13577 SnoaL-like domain 11 139 2.3E-27 T 12-10-2018 IPR037401 SnoaL-like domain vfu_B01266 493837dafc9bf626998d0377078362cb 163 SUPERFAMILY SSF54637 8 154 1.12E-40 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_B01266 493837dafc9bf626998d0377078362cb 163 Gene3D G3DSA:3.10.129.10 2 160 5.9E-43 T 12-10-2018 vfu_B01266 493837dafc9bf626998d0377078362cb 163 Pfam PF03061 Thioesterase superfamily 22 97 9.3E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 Pfam PF00682 HMGL-like 31 311 1.0E-68 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 SUPERFAMILY SSF110921 449 549 1.23E-24 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 553 5.0E-21 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 Gene3D G3DSA:3.30.160.270 377 552 7.1E-51 T 12-10-2018 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 Gene3D G3DSA:3.20.20.70 10 376 5.2E-148 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 555 50.259 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 SUPERFAMILY SSF51569 20 328 6.59E-91 T 12-10-2018 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 SMART SM00917 422 554 4.8E-19 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 553 7.1E-226 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 vfu_B00735 d4acf4c2927d1c8a6ef34f70ef1a61ee 564 SUPERFAMILY SSF89000 388 436 1.02E-12 T 12-10-2018 vfu_B01248 4662ceb15420fd7e6c290a1b5eb72dfd 238 Gene3D G3DSA:3.30.420.10 47 226 2.3E-28 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_B01248 4662ceb15420fd7e6c290a1b5eb72dfd 238 SMART SM00479 52 226 3.9E-18 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_B01248 4662ceb15420fd7e6c290a1b5eb72dfd 238 Pfam PF00929 Exonuclease 55 217 1.2E-11 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_B01248 4662ceb15420fd7e6c290a1b5eb72dfd 238 SUPERFAMILY SSF53098 45 226 2.11E-31 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 SMART SM01134 73 234 2.4E-68 T 12-10-2018 vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 SMART SM00420 6 58 1.7E-10 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 Gene3D G3DSA:3.30.750.70 70 139 7.7E-6 T 12-10-2018 vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 SUPERFAMILY SSF46785 4 63 8.19E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 Pfam PF00455 DeoR C terminal sensor domain 75 233 5.8E-52 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 9.0E-14 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A02335 dd607c9efa0a9a475ef12df139b958fc 259 SUPERFAMILY SSF100950 74 234 1.93E-31 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.691 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 ProSitePatterns PS01057 SAICAR synthetase signature 1. 124 138 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 SUPERFAMILY SSF56104 14 343 3.92E-65 T 12-10-2018 vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 Gene3D G3DSA:3.30.470.20 129 284 1.8E-38 T 12-10-2018 vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 Gene3D G3DSA:3.30.200.20 10 128 2.7E-19 T 12-10-2018 vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 Pfam PF01259 SAICAR synthetase 22 293 1.7E-47 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A02167 f3615ce4e1e85df73ab1d8af91fc9674 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 7.4E-220 T 12-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 PIRSF PIRSF000089 3 312 9.3E-111 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 SUPERFAMILY SSF52402 5 186 1.81E-55 T 12-10-2018 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 275 2.5E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 Pfam PF01012 Electron transfer flavoprotein domain 7 173 1.0E-40 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 Gene3D G3DSA:3.40.50.1220 187 312 2.8E-57 T 12-10-2018 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 SUPERFAMILY SSF52467 192 311 6.27E-49 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 SMART SM00893 6 185 7.9E-48 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 256 282 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 vfu_B01461 4882bcbafc889eb9afb9abba587f28cb 312 Gene3D G3DSA:3.40.50.620 5 186 9.5E-55 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A01014 16fb9b0c8d1a7a217b827b5b443a7873 314 Pfam PF09084 NMT1/THI5 like 26 239 3.9E-47 T 12-10-2018 IPR015168 SsuA/THI5-like vfu_A01014 16fb9b0c8d1a7a217b827b5b443a7873 314 SUPERFAMILY SSF53850 12 245 6.29E-38 T 12-10-2018 vfu_A01014 16fb9b0c8d1a7a217b827b5b443a7873 314 Gene3D G3DSA:3.40.190.10 96 201 3.5E-64 T 12-10-2018 vfu_A01014 16fb9b0c8d1a7a217b827b5b443a7873 314 Gene3D G3DSA:3.40.190.10 16 291 3.5E-64 T 12-10-2018 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 Gene3D G3DSA:1.20.1250.20 199 386 2.9E-21 T 12-10-2018 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 Pfam PF07690 Major Facilitator Superfamily 9 320 3.5E-44 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 Gene3D G3DSA:1.20.1250.20 3 198 1.4E-29 T 12-10-2018 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 PRINTS PR01035 Tetracycline resistance protein signature 98 119 8.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 PRINTS PR01035 Tetracycline resistance protein signature 40 59 8.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 PRINTS PR01035 Tetracycline resistance protein signature 10 26 8.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 PRINTS PR01035 Tetracycline resistance protein signature 158 178 8.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01148 a15e52088cd9723932c8e89d5d80d778 393 SUPERFAMILY SSF103473 3 385 4.32E-64 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01489 91de5cb5a2dd02417df8df74eb1ddf86 215 SUPERFAMILY SSF51391 3 201 1.31E-65 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01489 91de5cb5a2dd02417df8df74eb1ddf86 215 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 204 27.469 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01489 91de5cb5a2dd02417df8df74eb1ddf86 215 Pfam PF02581 Thiamine monophosphate synthase 6 186 7.5E-65 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01489 91de5cb5a2dd02417df8df74eb1ddf86 215 Gene3D G3DSA:3.20.20.70 1 206 3.5E-71 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01489 91de5cb5a2dd02417df8df74eb1ddf86 215 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 198 7.7E-66 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01464 bc2070b7c62200579cdc0f40af66ec09 206 Pfam PF02525 Flavodoxin-like fold 5 172 4.1E-46 T 12-10-2018 IPR003680 Flavodoxin-like fold vfu_A01464 bc2070b7c62200579cdc0f40af66ec09 206 Gene3D G3DSA:3.40.50.360 1 182 4.0E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01464 bc2070b7c62200579cdc0f40af66ec09 206 SUPERFAMILY SSF52218 5 180 1.31E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 SUPERFAMILY SSF51735 5 261 1.02E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 Gene3D G3DSA:1.10.1040.10 261 452 3.3E-42 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 Gene3D G3DSA:3.40.50.720 2 260 8.5E-81 T 12-10-2018 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 195 438 4.1E-84 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 SUPERFAMILY SSF48179 263 450 1.63E-42 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 6 166 5.0E-36 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 3.9E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 3.9E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 3.9E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_B00468 928899e094b8e2d3fc9fbade56c5f168 455 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 3.9E-16 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 Gene3D G3DSA:3.30.70.920 56 140 2.8E-24 T 12-10-2018 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.8E-22 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 SUPERFAMILY SSF54909 63 152 1.34E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 Gene3D G3DSA:1.10.10.10 4 55 1.7E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.7E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.7E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.7E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 SMART SM00344 3 112 1.6E-46 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 6.4E-17 T 12-10-2018 vfu_A01411 787c8fd072a8e828646410cf6d410d1f 152 SUPERFAMILY SSF46785 2 61 1.32E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00284 3301b97e9af5cdecdd6167a4c106fda6 199 Pfam PF01323 DSBA-like thioredoxin domain 41 187 6.1E-27 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 vfu_A00284 3301b97e9af5cdecdd6167a4c106fda6 199 SUPERFAMILY SSF52833 20 198 3.18E-45 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00284 3301b97e9af5cdecdd6167a4c106fda6 199 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 vfu_A00284 3301b97e9af5cdecdd6167a4c106fda6 199 PIRSF PIRSF001488 1 199 6.3E-69 T 12-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL vfu_A00284 3301b97e9af5cdecdd6167a4c106fda6 199 Gene3D G3DSA:3.40.30.10 17 198 2.2E-54 T 12-10-2018 vfu_B00088 7672f68a1e221a99d7d8c60cdf692839 213 Gene3D G3DSA:3.40.50.150 2 195 2.0E-46 T 12-10-2018 vfu_B00088 7672f68a1e221a99d7d8c60cdf692839 213 SUPERFAMILY SSF53335 25 195 2.66E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00088 7672f68a1e221a99d7d8c60cdf692839 213 Pfam PF01596 O-methyltransferase 25 167 1.1E-25 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 Gene3D G3DSA:2.40.50.140 283 324 5.9E-9 T 12-10-2018 vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 Gene3D G3DSA:3.40.50.300 7 224 3.3E-68 T 12-10-2018 vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 SMART SM00382 31 214 4.9E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 Gene3D G3DSA:2.40.50.940 225 282 5.9E-9 T 12-10-2018 vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 Pfam PF00005 ABC transporter 24 164 1.8E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 SUPERFAMILY SSF52540 7 244 5.06E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 SUPERFAMILY SSF50331 239 348 2.27E-13 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_A02461 520d170ffddd42a7bf5ceddaba6aec68 352 Pfam PF08402 TOBE domain 276 326 4.5E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_A00984 92a567dd841a4c4fc91f844575e296e1 320 Gene3D G3DSA:3.40.50.11270 16 100 1.7E-107 T 12-10-2018 vfu_A00984 92a567dd841a4c4fc91f844575e296e1 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 4.5E-95 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 vfu_A00984 92a567dd841a4c4fc91f844575e296e1 320 Gene3D G3DSA:3.40.1010.20 10 287 1.7E-107 T 12-10-2018 vfu_A00984 92a567dd841a4c4fc91f844575e296e1 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.503 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 vfu_A00984 92a567dd841a4c4fc91f844575e296e1 320 Pfam PF02401 LytB protein 7 288 6.0E-91 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 vfu_A00984 92a567dd841a4c4fc91f844575e296e1 320 Gene3D G3DSA:3.40.1010.20 101 202 1.7E-107 T 12-10-2018 vfu_A01023 aba98f80aa6b9339489f907056ad3616 461 Pfam PF07690 Major Facilitator Superfamily 24 399 2.4E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01023 aba98f80aa6b9339489f907056ad3616 461 Gene3D G3DSA:1.20.1250.20 14 222 2.1E-10 T 12-10-2018 vfu_A01023 aba98f80aa6b9339489f907056ad3616 461 Gene3D G3DSA:1.20.1250.20 245 442 8.5E-9 T 12-10-2018 vfu_A01023 aba98f80aa6b9339489f907056ad3616 461 SUPERFAMILY SSF103473 10 437 3.4E-35 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B01233 00e603090e645922910614bacc911219 274 Gene3D G3DSA:3.40.225.10 10 265 5.6E-73 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily vfu_B01233 00e603090e645922910614bacc911219 274 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 17 246 1.3E-23 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal vfu_B01233 00e603090e645922910614bacc911219 274 SMART SM01007 15 248 4.0E-13 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal vfu_B01233 00e603090e645922910614bacc911219 274 SUPERFAMILY SSF53639 8 268 5.49E-44 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily vfu_A00481 7b76c9edb2858507661c35141f9f7f50 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 417 8.0E-71 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00481 7b76c9edb2858507661c35141f9f7f50 446 Pfam PF01554 MatE 250 398 1.2E-10 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00481 7b76c9edb2858507661c35141f9f7f50 446 Pfam PF01554 MatE 23 183 2.1E-23 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 SUPERFAMILY SSF52540 10 263 8.33E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 Gene3D G3DSA:3.40.50.300 25 183 1.8E-14 T 12-10-2018 vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 SUPERFAMILY SSF47090 449 522 2.43E-11 T 12-10-2018 IPR036365 PGBD-like superfamily vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 Pfam PF13401 AAA domain 42 168 2.3E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 Gene3D G3DSA:3.90.70.10 335 452 3.1E-36 T 12-10-2018 vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 SMART SM00382 42 195 1.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 Pfam PF01471 Putative peptidoglycan binding domain 459 515 9.2E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like vfu_A00848 7238681184bb9682ed9fa7778cdeae93 530 Gene3D G3DSA:1.10.101.10 453 519 9.9E-20 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 vfu_A00503 6723ffa06a51540ec35f282c653783e8 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 9.5E-62 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 vfu_A00503 6723ffa06a51540ec35f282c653783e8 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 3.1E-51 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 vfu_A00503 6723ffa06a51540ec35f282c653783e8 144 SUPERFAMILY SSF69500 2 143 2.62E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily vfu_A00503 6723ffa06a51540ec35f282c653783e8 144 Gene3D G3DSA:3.50.80.10 1 144 3.4E-53 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily vfu_A00503 6723ffa06a51540ec35f282c653783e8 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.181 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 SUPERFAMILY SSF103190 171 312 5.49E-12 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 SUPERFAMILY SSF47384 445 514 4.51E-11 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 Pfam PF17202 Single cache domain 3 206 319 2.3E-26 T 12-10-2018 IPR033463 Single cache domain 3 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 Gene3D G3DSA:1.10.287.130 442 515 1.4E-20 T 12-10-2018 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 SUPERFAMILY SSF55874 507 669 1.09E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 564 669 1.9E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 Gene3D G3DSA:3.30.565.10 522 675 1.3E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 Pfam PF00512 His Kinase A (phospho-acceptor) domain 450 515 2.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 9.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 9.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 9.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 9.4E-18 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 SMART SM00388 450 517 1.7E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01875 376ce9c241c02deecf441cb43331bb8a 681 SMART SM00387 560 671 5.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01410 75859d9e40db17a01c126f33d4c5017d 355 SUPERFAMILY SSF53686 23 335 4.19E-70 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_A01410 75859d9e40db17a01c126f33d4c5017d 355 Gene3D G3DSA:3.40.50.1100 25 324 2.5E-66 T 12-10-2018 vfu_A01410 75859d9e40db17a01c126f33d4c5017d 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 36 316 1.1E-39 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme vfu_A01410 75859d9e40db17a01c126f33d4c5017d 355 Gene3D G3DSA:3.40.50.1100 51 157 2.5E-66 T 12-10-2018 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 Gene3D G3DSA:1.10.287.130 180 267 3.9E-22 T 12-10-2018 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 SMART SM00387 316 427 1.1E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 SUPERFAMILY SSF47384 194 269 6.28E-19 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 SMART SM00388 204 269 2.1E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 SUPERFAMILY SSF55874 258 427 4.85E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 SMART SM00448 452 563 1.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 269 3.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 3.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 3.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 3.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 3.1E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 SUPERFAMILY SSF52172 452 568 2.85E-35 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 Pfam PF00072 Response regulator receiver domain 454 563 1.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 Gene3D G3DSA:3.30.565.10 268 432 2.9E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 7.7E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01781 e212e61f24d1930d32fe1e4b5979254b 568 Gene3D G3DSA:3.40.50.12740 452 568 2.4E-36 T 12-10-2018 vfu_B01047 11d4b7fe6e6adbf5a57e7ef331318e9a 198 Gene3D G3DSA:3.40.30.10 25 196 4.2E-38 T 12-10-2018 vfu_B01047 11d4b7fe6e6adbf5a57e7ef331318e9a 198 Pfam PF02630 SCO1/SenC 40 174 6.9E-30 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01047 11d4b7fe6e6adbf5a57e7ef331318e9a 198 SUPERFAMILY SSF52833 36 194 2.77E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 110 2.3E-23 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 SUPERFAMILY SSF55604 6 82 8.63E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 Pfam PF02378 Phosphotransferase system, EIIC 110 410 3.1E-50 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 6.0E-92 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 465 4.3E-195 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 Gene3D G3DSA:3.30.1360.60 1 78 7.7E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A01505 5aa2d703e1664542dfc5f34b72014c6d 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 8.7E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 Pfam PF09383 NIL domain 268 339 1.5E-21 T 12-10-2018 IPR018449 NIL domain vfu_A02675 b810e63348976ec51365518ab813d7fa 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.4E-198 T 12-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 SUPERFAMILY SSF55021 248 343 1.26E-24 T 12-10-2018 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 Gene3D G3DSA:3.40.50.300 1 232 3.1E-74 T 12-10-2018 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 SUPERFAMILY SSF52540 1 239 1.86E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02675 b810e63348976ec51365518ab813d7fa 344 Pfam PF00005 ABC transporter 21 169 3.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 SMART SM00930 265 340 2.5E-25 T 12-10-2018 IPR018449 NIL domain vfu_A02675 b810e63348976ec51365518ab813d7fa 344 Gene3D G3DSA:3.30.70.260 244 344 3.3E-38 T 12-10-2018 vfu_A02675 b810e63348976ec51365518ab813d7fa 344 SMART SM00382 30 224 6.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01032 14d1c040498d4b58271a5d84789ed7c1 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.847 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 vfu_A01032 14d1c040498d4b58271a5d84789ed7c1 198 PIRSF PIRSF006102 1 198 3.3E-67 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_A01032 14d1c040498d4b58271a5d84789ed7c1 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 8.4E-107 T 12-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 vfu_A01032 14d1c040498d4b58271a5d84789ed7c1 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 2.4E-60 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 SMART SM00283 231 432 3.7E-18 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 SUPERFAMILY SSF55785 32 132 2.62E-21 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00943 afb8496f751e1a71207743f5a7540450 437 SUPERFAMILY SSF58104 250 434 5.36E-50 T 12-10-2018 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 260 1.3E-14 T 12-10-2018 IPR000014 PAS domain vfu_B00943 afb8496f751e1a71207743f5a7540450 437 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 135 3.1E-14 T 12-10-2018 IPR000014 PAS domain vfu_B00943 afb8496f751e1a71207743f5a7540450 437 Pfam PF08447 PAS fold 165 249 9.1E-11 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 Pfam PF08447 PAS fold 44 128 2.6E-11 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 Gene3D G3DSA:3.30.450.20 126 244 2.3E-17 T 12-10-2018 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 Gene3D G3DSA:3.30.450.20 9 125 4.0E-20 T 12-10-2018 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 Gene3D G3DSA:1.10.287.950 245 437 2.5E-49 T 12-10-2018 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 290 435 7.6E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 SUPERFAMILY SSF55785 153 256 2.44E-21 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00943 afb8496f751e1a71207743f5a7540450 437 SMART SM00086 94 135 4.7 T 12-10-2018 IPR001610 PAC motif vfu_B00943 afb8496f751e1a71207743f5a7540450 437 SMART SM00086 214 256 0.066 T 12-10-2018 IPR001610 PAC motif vfu_B00943 afb8496f751e1a71207743f5a7540450 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 354 383 1.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 431 1.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 352 1.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00943 afb8496f751e1a71207743f5a7540450 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 252 281 1.2E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02502 c1c4647d45e28f382a4d59d7a3adb6a9 395 Pfam PF04865 Baseplate J-like protein 84 336 1.4E-32 T 12-10-2018 IPR006949 Baseplate protein J-like vfu_A01163 a186130faa5ea040c6d0240480282e79 67 Pfam PF11446 Protein of unknown function (DUF2897) 6 52 1.8E-12 T 12-10-2018 IPR021550 Protein of unknown function DUF2897 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 Gene3D G3DSA:3.30.70.1400 65 149 1.2E-83 T 12-10-2018 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 264 4.8E-88 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 PIRSF PIRSF006487 1 381 1.1E-81 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 SUPERFAMILY SSF101790 288 380 7.19E-26 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 Gene3D G3DSA:3.30.1360.120 18 240 1.2E-83 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 Gene3D G3DSA:2.40.30.110 293 370 6.7E-27 T 12-10-2018 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 17 375 1.6E-106 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 Gene3D G3DSA:4.10.1250.10 242 290 1.3E-20 T 12-10-2018 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 277 370 2.7E-20 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 vfu_B01366 6bbb830577ac3c590fa5384a4bed4fa0 381 SUPERFAMILY SSF103025 14 289 8.63E-91 T 12-10-2018 vfu_A00293 151674f9323a1771641578a5483b9895 326 SUPERFAMILY SSF50129 2 145 3.62E-42 T 12-10-2018 IPR011032 GroES-like superfamily vfu_A00293 151674f9323a1771641578a5483b9895 326 Pfam PF00107 Zinc-binding dehydrogenase 159 282 4.1E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 vfu_A00293 151674f9323a1771641578a5483b9895 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 7.0E-137 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI vfu_A00293 151674f9323a1771641578a5483b9895 326 SMART SM00829 13 324 3.2E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 vfu_A00293 151674f9323a1771641578a5483b9895 326 Gene3D G3DSA:3.90.180.10 17 325 6.6E-121 T 12-10-2018 vfu_A00293 151674f9323a1771641578a5483b9895 326 Gene3D G3DSA:3.40.50.720 126 294 6.6E-121 T 12-10-2018 vfu_A00293 151674f9323a1771641578a5483b9895 326 SUPERFAMILY SSF51735 117 291 3.34E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 Pfam PF00270 DEAD/DEAH box helicase 25 194 9.2E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 SUPERFAMILY SSF52540 73 358 1.94E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 Pfam PF00271 Helicase conserved C-terminal domain 229 338 6.8E-26 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 Gene3D G3DSA:3.40.50.300 212 373 1.1E-43 T 12-10-2018 vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 SMART SM00490 257 338 4.2E-29 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 SMART SM00487 20 221 4.6E-62 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_B00959 3bad8efb800be319bbdc3cd37c43ac74 397 Gene3D G3DSA:3.40.50.300 1 210 1.7E-76 T 12-10-2018 vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 PIRSF PIRSF004749 1 170 1.7E-55 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 33 62 5.0E-37 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 89 100 5.0E-37 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 120 149 5.0E-37 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 PRINTS PR01576 Peptide deformylase signature 101 119 5.0E-37 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 SUPERFAMILY SSF56420 3 165 6.02E-62 T 12-10-2018 IPR036821 Peptide deformylase superfamily vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 Pfam PF01327 Polypeptide deformylase 4 152 4.5E-49 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.757 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.5E-60 T 12-10-2018 IPR023635 Peptide deformylase vfu_A00272 027b2d27dce62d41fd243c78f1f1141a 170 Gene3D G3DSA:3.90.45.10 1 169 1.9E-66 T 12-10-2018 IPR036821 Peptide deformylase superfamily vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 Gene3D G3DSA:3.40.630.30 2 144 2.3E-27 T 12-10-2018 vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 2.0E-43 T 12-10-2018 IPR012660 Thioesterase, putative vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 Gene3D G3DSA:3.10.129.10 147 298 3.4E-44 T 12-10-2018 vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 SUPERFAMILY SSF54637 154 296 2.46E-39 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 Pfam PF00583 Acetyltransferase (GNAT) family 37 122 9.4E-12 T 12-10-2018 IPR000182 GNAT domain vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 SUPERFAMILY SSF55729 2 154 1.22E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00504 3007bf3428d9f3ff0cac0ca5c4a07235 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 4.6E-49 T 12-10-2018 IPR012660 Thioesterase, putative vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.2E-115 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 SUPERFAMILY SSF142754 29 341 1.7E-106 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 Gene3D G3DSA:3.40.50.10800 32 322 9.4E-95 T 12-10-2018 vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 1.2E-102 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.873 T 12-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 Gene3D G3DSA:3.40.50.10800 200 295 9.4E-95 T 12-10-2018 vfu_A02339 9b01efb46e0bf844b1ad1ff713c75b12 353 Gene3D G3DSA:3.40.50.10800 115 340 9.4E-95 T 12-10-2018 vfu_B00706 0b82620adc81405d77ac6da12e8905eb 329 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 2 319 2.6E-117 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 vfu_B00706 0b82620adc81405d77ac6da12e8905eb 329 PIRSF PIRSF017020 1 327 4.9E-115 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 vfu_B00706 0b82620adc81405d77ac6da12e8905eb 329 Gene3D G3DSA:3.40.630.10 1 328 1.5E-114 T 12-10-2018 vfu_B00706 0b82620adc81405d77ac6da12e8905eb 329 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 43 321 3.2E-61 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 vfu_B00706 0b82620adc81405d77ac6da12e8905eb 329 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 329 130.853 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 vfu_B00706 0b82620adc81405d77ac6da12e8905eb 329 SUPERFAMILY SSF53187 2 319 2.91E-79 T 12-10-2018 vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 131 146 4.9E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 23 32 4.9E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 68 89 4.9E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 169 184 4.9E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 PRINTS PR00969 Pili chaperone signature 98 115 4.9E-27 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 230 1.2E-8 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 SUPERFAMILY SSF49354 18 149 2.54E-31 T 12-10-2018 IPR008962 PapD-like superfamily vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 Gene3D G3DSA:2.60.40.10 156 243 4.6E-15 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 Gene3D G3DSA:2.60.40.10 23 147 1.7E-34 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 SUPERFAMILY SSF49584 166 243 5.76E-15 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily vfu_A02750 7badf3c7c9bc7dc75d978cf9349e0c78 249 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 149 4.3E-33 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 vfu_B01108 8d04ac388363eec752fea215dffa9c1f 298 Pfam PF01040 UbiA prenyltransferase family 33 278 1.0E-61 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 vfu_B01108 8d04ac388363eec752fea215dffa9c1f 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 20 296 2.1E-97 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 vfu_B01108 8d04ac388363eec752fea215dffa9c1f 298 Gene3D G3DSA:1.10.357.140 23 183 3.9E-21 T 12-10-2018 vfu_B01108 8d04ac388363eec752fea215dffa9c1f 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 16 297 19.495 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 vfu_B01108 8d04ac388363eec752fea215dffa9c1f 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 71 93 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site vfu_A02333 8f3650396dc6bfcefaab5a16b7d63d71 263 Pfam PF08220 DeoR-like helix-turn-helix domain 7 60 6.7E-13 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A02333 8f3650396dc6bfcefaab5a16b7d63d71 263 SUPERFAMILY SSF100950 75 235 8.37E-33 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_A02333 8f3650396dc6bfcefaab5a16b7d63d71 263 SMART SM00420 7 59 2.3E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A02333 8f3650396dc6bfcefaab5a16b7d63d71 263 SMART SM01134 74 234 4.4E-67 T 12-10-2018 vfu_A02333 8f3650396dc6bfcefaab5a16b7d63d71 263 Pfam PF00455 DeoR C terminal sensor domain 76 233 3.9E-51 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_A02333 8f3650396dc6bfcefaab5a16b7d63d71 263 SUPERFAMILY SSF46785 6 69 1.43E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 SMART SM00490 219 315 1.2E-12 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 Gene3D G3DSA:1.20.120.1080 357 456 4.5E-9 T 12-10-2018 vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 SMART SM00487 1 174 4.6E-15 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 Pfam PF00270 DEAD/DEAH box helicase 15 149 4.3E-8 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 Gene3D G3DSA:3.40.50.300 168 332 2.0E-40 T 12-10-2018 vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 Pfam PF00271 Helicase conserved C-terminal domain 203 314 7.3E-13 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 SMART SM00847 372 461 0.0048 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 Gene3D G3DSA:3.40.50.300 1 163 2.1E-45 T 12-10-2018 vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 SUPERFAMILY SSF52540 18 325 1.84E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02183 d0dba601f2f799f0a674a1d5e2cb700c 782 Pfam PF04408 Helicase associated domain (HA2) 373 446 8.3E-8 T 12-10-2018 IPR007502 Helicase-associated domain GO:0004386 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 8.1E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 Pfam PF07702 UTRA domain 92 229 1.4E-34 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 Gene3D G3DSA:1.10.10.10 2 70 4.3E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 9.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 9.6E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 SMART SM00866 92 229 1.7E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 SUPERFAMILY SSF46785 2 73 9.85E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 SUPERFAMILY SSF64288 96 232 2.36E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 SMART SM00345 10 69 5.0E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 Gene3D G3DSA:3.40.1410.10 90 225 6.7E-34 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_A02151 6d8d8090bf30a8a660d1392251d4568e 239 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 234 7.0E-94 T 12-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 vfu_A01093 b5d9a524224db000e698c9b900045597 155 Pfam PF00075 RNase H 3 141 6.5E-54 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 vfu_A01093 b5d9a524224db000e698c9b900045597 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.653 T 12-10-2018 IPR022892 Ribonuclease HI GO:0004523 vfu_A01093 b5d9a524224db000e698c9b900045597 155 Gene3D G3DSA:3.30.420.10 1 155 8.9E-60 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A01093 b5d9a524224db000e698c9b900045597 155 SUPERFAMILY SSF53098 3 143 2.28E-57 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 PIRSF PIRSF002560 1 157 1.2E-72 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 4.2E-83 T 12-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 Gene3D G3DSA:1.20.1260.10 1 158 5.9E-72 T 12-10-2018 IPR012347 Ferritin-like vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 Pfam PF00210 Ferritin-like domain 8 143 1.4E-40 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 vfu_A03153 e4e0c76e7fed750406477c706457ac7d 158 SUPERFAMILY SSF47240 1 153 2.24E-56 T 12-10-2018 IPR009078 Ferritin-like superfamily vfu_B01438 7bc2a8451a2f68e1f59c56cf487a9f02 372 PRINTS PR01035 Tetracycline resistance protein signature 127 149 1.5E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01438 7bc2a8451a2f68e1f59c56cf487a9f02 372 PRINTS PR01035 Tetracycline resistance protein signature 4 20 1.5E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01438 7bc2a8451a2f68e1f59c56cf487a9f02 372 PRINTS PR01035 Tetracycline resistance protein signature 294 314 1.5E-5 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 vfu_B01438 7bc2a8451a2f68e1f59c56cf487a9f02 372 Pfam PF07690 Major Facilitator Superfamily 20 339 2.2E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B01438 7bc2a8451a2f68e1f59c56cf487a9f02 372 Gene3D G3DSA:1.20.1720.10 7 371 6.5E-69 T 12-10-2018 vfu_B01438 7bc2a8451a2f68e1f59c56cf487a9f02 372 SUPERFAMILY SSF103473 7 357 2.62E-49 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 Pfam PF03466 LysR substrate binding domain 104 307 2.7E-26 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 Gene3D G3DSA:3.40.190.10 109 296 1.8E-39 T 12-10-2018 vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 56 1.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 Gene3D G3DSA:3.40.190.10 181 284 1.8E-39 T 12-10-2018 vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 SUPERFAMILY SSF53850 106 308 8.42E-26 T 12-10-2018 vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 SUPERFAMILY SSF46785 19 101 1.53E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 Gene3D G3DSA:1.10.10.10 14 103 7.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01201 0741645030d5b6cb79bff4ce9b3b0c01 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 79 6.8E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 85 94 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 Pfam PF00571 CBS domain 382 464 7.3E-4 T 12-10-2018 IPR000644 CBS domain vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 Pfam PF00571 CBS domain 313 364 5.0E-9 T 12-10-2018 IPR000644 CBS domain vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 SMART SM00116 418 465 25.0 T 12-10-2018 IPR000644 CBS domain vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 SMART SM00116 320 368 5.3E-4 T 12-10-2018 IPR000644 CBS domain vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 Pfam PF01226 Formate/nitrite transporter 17 277 3.3E-71 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 16 281 2.2E-113 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 Gene3D G3DSA:1.20.1080.10 4 270 5.0E-87 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 SUPERFAMILY SSF54631 311 464 5.45E-21 T 12-10-2018 vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 170 180 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 Gene3D G3DSA:3.10.580.10 306 467 1.9E-23 T 12-10-2018 vfu_B00245 0137fb3438a7622c05a4b6171a665e5a 483 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 28 281 4.9E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 vfu_A01915 353ef63ff15d07649e52d5ab982cb588 173 SMART SM00530 8 63 7.9E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_A01915 353ef63ff15d07649e52d5ab982cb588 173 Pfam PF01381 Helix-turn-helix 9 63 1.6E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_A01915 353ef63ff15d07649e52d5ab982cb588 173 SUPERFAMILY SSF47413 2 67 4.16E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A01915 353ef63ff15d07649e52d5ab982cb588 173 Gene3D G3DSA:1.10.260.40 3 87 6.1E-18 T 12-10-2018 vfu_B00214 353ef63ff15d07649e52d5ab982cb588 173 SMART SM00530 8 63 7.9E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_B00214 353ef63ff15d07649e52d5ab982cb588 173 Pfam PF01381 Helix-turn-helix 9 63 1.6E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_B00214 353ef63ff15d07649e52d5ab982cb588 173 SUPERFAMILY SSF47413 2 67 4.16E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00214 353ef63ff15d07649e52d5ab982cb588 173 Gene3D G3DSA:1.10.260.40 3 87 6.1E-18 T 12-10-2018 vfu_B00220 353ef63ff15d07649e52d5ab982cb588 173 SMART SM00530 8 63 7.9E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_B00220 353ef63ff15d07649e52d5ab982cb588 173 Pfam PF01381 Helix-turn-helix 9 63 1.6E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_B00220 353ef63ff15d07649e52d5ab982cb588 173 SUPERFAMILY SSF47413 2 67 4.16E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00220 353ef63ff15d07649e52d5ab982cb588 173 Gene3D G3DSA:1.10.260.40 3 87 6.1E-18 T 12-10-2018 vfu_A02038 e3c619280013770a0645ad54ef499e31 230 PIRSF PIRSF028063 1 221 9.0E-133 T 12-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger vfu_A02038 e3c619280013770a0645ad54ef499e31 230 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 1.1E-35 T 12-10-2018 IPR024402 Domain of unknown function DUF2726 vfu_A01946 c9599347964da87389a16daf3c6b3e8c 295 SUPERFAMILY SSF51621 101 271 6.28E-32 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A01946 c9599347964da87389a16daf3c6b3e8c 295 Gene3D G3DSA:3.20.20.60 37 290 1.3E-36 T 12-10-2018 vfu_A01946 c9599347964da87389a16daf3c6b3e8c 295 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 97 267 3.4E-17 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 Gene3D G3DSA:3.30.420.40 11 532 5.1E-122 T 12-10-2018 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 SUPERFAMILY SSF53067 293 554 2.37E-45 T 12-10-2018 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 SUPERFAMILY SSF53067 10 290 2.36E-28 T 12-10-2018 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 10 554 1.8E-190 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 PIRSF PIRSF000538 9 561 6.6E-47 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 297 507 1.0E-34 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 Hamap MF_00520 Ribulokinase [araB]. 8 564 45.211 T 12-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 Gene3D G3DSA:3.30.420.460 342 542 5.1E-122 T 12-10-2018 vfu_A00402 7a79c9b485ed6c475e0721a8bc03a72b 570 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 11 287 1.6E-16 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 vfu_A02170 b6acfd620b557336880fe509fddf1c66 362 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 360 4.9E-167 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 vfu_A02170 b6acfd620b557336880fe509fddf1c66 362 Gene3D G3DSA:3.75.10.10 2 362 3.9E-135 T 12-10-2018 vfu_A02170 b6acfd620b557336880fe509fddf1c66 362 SUPERFAMILY SSF55909 3 360 2.14E-137 T 12-10-2018 vfu_A02170 b6acfd620b557336880fe509fddf1c66 362 Hamap MF_01841 Agmatine deiminase [aguA]. 5 360 59.074 T 12-10-2018 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 vfu_A02170 b6acfd620b557336880fe509fddf1c66 362 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 359 2.5E-119 T 12-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 vfu_A02086 f2331b98a5db5f12cb6c7dfd476f7a0a 204 Pfam PF12464 Maltose acetyltransferase 6 57 4.7E-12 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_A02086 f2331b98a5db5f12cb6c7dfd476f7a0a 204 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 9.1E-13 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A02086 f2331b98a5db5f12cb6c7dfd476f7a0a 204 Gene3D G3DSA:2.160.10.10 1 201 3.0E-68 T 12-10-2018 vfu_A02086 f2331b98a5db5f12cb6c7dfd476f7a0a 204 SUPERFAMILY SSF51161 2 194 2.08E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A02086 f2331b98a5db5f12cb6c7dfd476f7a0a 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 vfu_A02086 f2331b98a5db5f12cb6c7dfd476f7a0a 204 SMART SM01266 4 58 4.7E-16 T 12-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.40.50.1000 413 683 1.3E-95 T 12-10-2018 IPR023214 HAD superfamily vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.30.70.100 8 71 2.9E-16 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Pfam PF00122 E1-E2 ATPase 231 411 3.2E-56 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF55008 4 74 1.7E-17 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 353 367 3.4E-11 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 220 238 3.4E-11 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 608 625 3.4E-11 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 148 167 3.4E-11 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00943 Copper-transporting ATPase signature 48 68 3.4E-11 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 163 740 3.3E-187 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 145 741 3.9E-184 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF56784 432 737 2.53E-57 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF81665 201 710 1.2E-10 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 434 440 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Pfam PF00702 haloacid dehalogenase-like hydrolase 428 645 4.5E-41 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 567 1.8E-28 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 578 588 1.8E-28 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 654 666 1.8E-28 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 1.8E-28 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 1.8E-28 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 432 446 1.8E-28 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Pfam PF00403 Heavy-metal-associated domain 11 66 5.8E-12 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:2.70.150.20 223 335 2.1E-42 T 12-10-2018 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 208 708 5.9E-92 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 SUPERFAMILY SSF81653 234 330 3.53E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 vfu_A00200 c2c262b5d92dcfe353932143f8b44736 748 Gene3D G3DSA:3.40.1110.10 443 563 1.3E-95 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 vfu_B00958 fa8d7185416be4cba6a66927087941aa 395 Gene3D G3DSA:1.20.1720.10 8 387 8.0E-67 T 12-10-2018 vfu_B00958 fa8d7185416be4cba6a66927087941aa 395 Pfam PF07690 Major Facilitator Superfamily 15 356 1.0E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00958 fa8d7185416be4cba6a66927087941aa 395 SUPERFAMILY SSF103473 5 381 5.62E-45 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 Gene3D G3DSA:3.30.950.10 156 290 9.0E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 45 59 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 SUPERFAMILY SSF53790 36 281 1.57E-78 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 42 251 7.1E-46 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 40 272 8.0E-92 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 120 153 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_A00700 80cfb57212529e976c42b36ee330b84f 292 Gene3D G3DSA:3.40.1010.10 39 155 3.6E-43 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 vfu_B01343 ed6ca45b1bdad81181f843546ae9e19b 514 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 153 307 2.8E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01343 ed6ca45b1bdad81181f843546ae9e19b 514 SUPERFAMILY SSF58104 68 335 6.41E-54 T 12-10-2018 vfu_B01343 ed6ca45b1bdad81181f843546ae9e19b 514 Gene3D G3DSA:1.10.287.950 51 348 8.8E-53 T 12-10-2018 vfu_B01343 ed6ca45b1bdad81181f843546ae9e19b 514 SMART SM00283 81 343 2.6E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 Pfam PF02629 CoA binding domain 6 99 3.7E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.5E-40 T 12-10-2018 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.5E-40 T 12-10-2018 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.5E-40 T 12-10-2018 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.5E-40 T 12-10-2018 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 SMART SM00881 4 100 6.0E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 SUPERFAMILY SSF51735 1 122 4.19E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.246 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 5.0E-146 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 PIRSF PIRSF001553 1 289 4.0E-134 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 SUPERFAMILY SSF52210 123 286 1.1E-56 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 Gene3D G3DSA:3.40.50.720 2 123 1.2E-51 T 12-10-2018 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 Gene3D G3DSA:3.40.50.261 124 288 8.1E-76 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A01237 d50e30e477b6fc79859a313c8b1e0344 290 Pfam PF00549 CoA-ligase 151 270 1.0E-21 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 Gene3D G3DSA:3.40.50.720 1 184 2.9E-51 T 12-10-2018 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PIRSF PIRSF000114 1 329 6.7E-97 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 156 3.5E-46 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 177 315 1.5E-52 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 319 36.495 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 53 80 2.0E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 3 20 2.0E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 170 194 2.0E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 195 219 2.0E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 129 149 2.0E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 235 252 2.0E-43 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 SUPERFAMILY SSF48179 176 328 1.45E-56 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 Gene3D G3DSA:1.10.1040.10 186 329 2.8E-54 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 185 206 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 vfu_A00615 084e1a45ffaa5e7a77112905e59458a3 329 SUPERFAMILY SSF51735 1 175 5.67E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 179 319 8.7E-11 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 141 201 3.79E-6 T 12-10-2018 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 Pfam PF00529 HlyD membrane-fusion protein of T1SS 41 377 6.2E-15 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 199 298 3.27E-11 T 12-10-2018 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:1.10.287.470 140 204 7.3E-11 T 12-10-2018 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 SUPERFAMILY SSF111369 59 150 1.57E-11 T 12-10-2018 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:1.10.287.470 98 139 6.9E-12 T 12-10-2018 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:2.40.30.170 264 386 2.2E-32 T 12-10-2018 vfu_A01499 32077fbcf293ea73bb5945b7016d3d79 399 Gene3D G3DSA:2.40.50.100 63 97 6.9E-12 T 12-10-2018 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 Pfam PF02119 Flagellar P-ring protein 27 372 6.3E-118 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 373 32.68 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 41 56 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 166 184 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 125 143 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 26 41 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 86 105 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 192 210 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 60 75 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 108 125 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02258 e2579136c6387b87560fea7ebd1defa0 373 PRINTS PR01010 Flagellar P-ring protein signature 256 268 4.7E-65 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.384 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 SUPERFAMILY SSF55194 2 185 1.26E-70 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 Gene3D G3DSA:1.10.132.20 1 34 2.0E-10 T 12-10-2018 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 Pfam PF01765 Ribosome recycling factor 20 183 4.1E-62 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 Gene3D G3DSA:1.10.132.20 100 185 6.0E-30 T 12-10-2018 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 9.5E-76 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 vfu_A01072 3b5e078cfd74ea7f4abb688622e223ca 185 Gene3D G3DSA:3.30.1360.40 35 99 7.3E-27 T 12-10-2018 vfu_B01456 6fd8b4eed13c0b9262f8186a1e3f6303 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 259 8.2E-109 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 vfu_B01456 6fd8b4eed13c0b9262f8186a1e3f6303 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01456 6fd8b4eed13c0b9262f8186a1e3f6303 259 SMART SM00382 39 239 1.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01456 6fd8b4eed13c0b9262f8186a1e3f6303 259 SUPERFAMILY SSF52540 12 253 9.96E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01456 6fd8b4eed13c0b9262f8186a1e3f6303 259 Pfam PF00005 ABC transporter 30 184 4.9E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01456 6fd8b4eed13c0b9262f8186a1e3f6303 259 Gene3D G3DSA:3.40.50.300 10 256 9.2E-70 T 12-10-2018 vfu_A00898 948f68054adc83b5d50c391f5ab0389a 767 Gene3D G3DSA:3.10.20.310 339 424 4.0E-8 T 12-10-2018 vfu_A00898 948f68054adc83b5d50c391f5ab0389a 767 SUPERFAMILY SSF52151 35 327 9.94E-60 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase vfu_A00898 948f68054adc83b5d50c391f5ab0389a 767 Pfam PF07244 Surface antigen variable number repeat 351 421 4.9E-6 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 vfu_A00898 948f68054adc83b5d50c391f5ab0389a 767 Pfam PF01734 Patatin-like phospholipase 40 231 7.4E-33 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 vfu_A00898 948f68054adc83b5d50c391f5ab0389a 767 Gene3D G3DSA:3.40.1090.10 27 127 3.1E-27 T 12-10-2018 vfu_A00898 948f68054adc83b5d50c391f5ab0389a 767 Gene3D G3DSA:3.40.1090.10 147 286 1.0E-18 T 12-10-2018 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 Pfam PF08376 Nitrate and nitrite sensing 47 284 4.3E-32 T 12-10-2018 IPR013587 Nitrate/nitrite sensing protein vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 517 546 6.2E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 6.2E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 565 594 6.2E-8 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 Gene3D G3DSA:1.10.287.950 322 653 3.6E-61 T 12-10-2018 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 SMART SM00283 390 651 4.5E-57 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 617 1.8E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 SUPERFAMILY SSF58104 343 652 1.22E-64 T 12-10-2018 vfu_B00509 4c1f54ab6718a414ef805e1beb00d7c2 653 SMART SM00304 322 375 8.2E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00684 f8624ff3e5b8c9d48487c5762f6437c4 289 SUPERFAMILY SSF50182 96 169 4.58E-10 T 12-10-2018 IPR010920 LSM domain superfamily vfu_B00684 f8624ff3e5b8c9d48487c5762f6437c4 289 Pfam PF00924 Mechanosensitive ion channel 59 174 1.0E-15 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 SUPERFAMILY SSF47203 225 378 3.54E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 Gene3D G3DSA:1.20.140.10 232 381 4.5E-54 T 12-10-2018 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.4E-28 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 Gene3D G3DSA:2.40.110.10 121 231 6.9E-41 T 12-10-2018 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 4.3E-50 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 Gene3D G3DSA:1.10.540.10 1 117 1.4E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 4.8E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 SUPERFAMILY SSF56645 1 240 2.49E-79 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 vfu_B01430 85d9d24c2bde5fcc34108654c33aadf3 384 PIRSF PIRSF016578 4 379 2.5E-24 T 12-10-2018 vfu_A02107 4efb1c9727395f120a267975eb4db3bc 342 SUPERFAMILY SSF53187 9 329 3.18E-76 T 12-10-2018 vfu_A02107 4efb1c9727395f120a267975eb4db3bc 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 128.893 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 vfu_A02107 4efb1c9727395f120a267975eb4db3bc 342 Gene3D G3DSA:3.40.630.10 1 342 4.4E-120 T 12-10-2018 vfu_A02107 4efb1c9727395f120a267975eb4db3bc 342 PIRSF PIRSF017020 4 336 1.4E-120 T 12-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 vfu_A02107 4efb1c9727395f120a267975eb4db3bc 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 329 2.2E-68 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 3.4E-177 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 PIRSF PIRSF000521 22 421 8.0E-39 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 Pfam PF00202 Aminotransferase class-III 24 418 2.3E-129 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 SUPERFAMILY SSF53383 4 419 1.03E-132 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 Gene3D G3DSA:3.90.1150.10 7 412 5.5E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 47.823 T 12-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 vfu_A01566 ea1a191eba9e80116e17978a46b18d4f 429 Gene3D G3DSA:3.40.640.10 58 327 5.5E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 Gene3D G3DSA:2.40.50.180 39 153 2.0E-28 T 12-10-2018 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 Pfam PF00072 Response regulator receiver domain 184 302 1.4E-18 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 Pfam PF01584 CheW-like domain 21 155 1.2E-34 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 SUPERFAMILY SSF52172 183 306 1.85E-25 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 SMART SM00448 182 302 1.3E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 Gene3D G3DSA:2.30.30.40 23 147 2.0E-28 T 12-10-2018 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 Gene3D G3DSA:3.40.50.2300 168 307 1.3E-25 T 12-10-2018 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 SUPERFAMILY SSF50341 16 157 7.59E-36 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 PIRSF PIRSF002867 1 308 6.3E-104 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV vfu_A01118 3afe87b848b301b777c4a157436e5a17 308 SMART SM00260 17 153 2.7E-24 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A02688 dd94dfc27adac7d615f9d716ebf2c030 204 SUPERFAMILY SSF53474 8 175 4.67E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02688 dd94dfc27adac7d615f9d716ebf2c030 204 Gene3D G3DSA:3.40.50.1820 10 189 1.2E-28 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02688 dd94dfc27adac7d615f9d716ebf2c030 204 Pfam PF12697 Alpha/beta hydrolase family 12 117 1.6E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 SUPERFAMILY SSF48029 132 343 2.88E-66 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 Pfam PF01706 FliG C-terminal domain 236 342 8.0E-40 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 213 238 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 266 286 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 23 39 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 52 78 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 132 155 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 290 316 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 5.5E-57 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 Gene3D G3DSA:1.10.220.30 18 102 6.7E-17 T 12-10-2018 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 Gene3D G3DSA:1.10.220.30 107 211 1.7E-28 T 12-10-2018 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 Pfam PF14842 FliG N-terminal domain 23 123 2.3E-27 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 19 348 1.2E-93 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 Pfam PF14841 FliG middle domain 133 205 1.4E-25 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 SUPERFAMILY SSF48029 24 134 5.36E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 PIRSF PIRSF003161 18 350 2.2E-111 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A01191 6fd0caf0e44c9c57b93a08fd4dc99911 350 Gene3D G3DSA:1.10.220.30 213 350 1.5E-41 T 12-10-2018 vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 6.3E-67 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 SUPERFAMILY SSF63380 93 196 5.87E-32 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 Gene3D G3DSA:2.40.30.20 1 89 4.2E-27 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 Pfam PF00677 Lumazine binding domain 3 87 6.8E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 Pfam PF00677 Lumazine binding domain 100 184 1.7E-23 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 Gene3D G3DSA:2.40.30.20 102 204 2.0E-34 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 SUPERFAMILY SSF63380 1 89 6.29E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A01060 9daa1dad7c6ff10724a506a94228d4c7 218 PIRSF PIRSF000498 1 212 1.1E-79 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_B01278 1d6009dd1de192b3968324554cfd47e5 368 Pfam PF01553 Acyltransferase 92 239 1.9E-8 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_B01278 1d6009dd1de192b3968324554cfd47e5 368 SUPERFAMILY SSF69593 88 244 2.35E-7 T 12-10-2018 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 SUPERFAMILY SSF52540 283 524 6.58E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 Pfam PF00005 ABC transporter 303 453 4.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 Pfam PF00005 ABC transporter 26 184 4.1E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 526 6.4E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 262 1.3E-4 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 SMART SM00382 34 234 6.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 SMART SM00382 311 502 2.4E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 SUPERFAMILY SSF52540 5 255 2.56E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 Gene3D G3DSA:3.40.50.300 274 529 6.0E-78 T 12-10-2018 vfu_B00130 1a3ed608749c15ae74e59bc1d401d4ff 530 Gene3D G3DSA:3.40.50.300 3 273 4.7E-79 T 12-10-2018 vfu_B00253 a47f28f5ee095128d58296a50deee393 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 438 596 4.7E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_B00253 a47f28f5ee095128d58296a50deee393 612 Pfam PF07695 7TM diverse intracellular signalling 188 387 2.8E-39 T 12-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 vfu_B00253 a47f28f5ee095128d58296a50deee393 612 SMART SM00267 426 601 4.8E-48 T 12-10-2018 IPR000160 GGDEF domain vfu_B00253 a47f28f5ee095128d58296a50deee393 612 SUPERFAMILY SSF55073 442 602 7.22E-39 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00253 a47f28f5ee095128d58296a50deee393 612 Gene3D G3DSA:3.30.70.270 431 604 4.9E-45 T 12-10-2018 vfu_B00253 a47f28f5ee095128d58296a50deee393 612 Gene3D G3DSA:2.60.40.2380 38 179 3.4E-29 T 12-10-2018 vfu_B00253 a47f28f5ee095128d58296a50deee393 612 Pfam PF07696 7TMR-DISM extracellular 2 42 173 1.3E-29 T 12-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 vfu_B00253 a47f28f5ee095128d58296a50deee393 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 433 600 1.8E-36 T 12-10-2018 IPR000160 GGDEF domain vfu_A02777 369c8d51536d607731b8d88791c11da6 301 Gene3D G3DSA:1.10.260.40 7 116 4.4E-26 T 12-10-2018 vfu_A02777 369c8d51536d607731b8d88791c11da6 301 SMART SM00530 20 81 8.5E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_A02777 369c8d51536d607731b8d88791c11da6 301 Pfam PF13464 Domain of unknown function (DUF4115) 227 300 2.0E-24 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 vfu_A02777 369c8d51536d607731b8d88791c11da6 301 SUPERFAMILY SSF47413 16 83 2.41E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A02777 369c8d51536d607731b8d88791c11da6 301 Pfam PF13413 Helix-turn-helix domain 21 78 2.4E-17 T 12-10-2018 vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 9.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 9.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 9.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 SUPERFAMILY SSF51735 1 258 1.39E-57 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 Pfam PF00106 short chain dehydrogenase 8 197 9.8E-44 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01968 b0ab2451ff1c38cbc7ec5cba8b217cb0 270 Gene3D G3DSA:3.40.50.720 3 269 6.8E-68 T 12-10-2018 vfu_B00316 d1c9dcb5f25ad5dceea4dc7286554a92 556 SUPERFAMILY SSF53850 125 554 2.95E-46 T 12-10-2018 vfu_B00316 d1c9dcb5f25ad5dceea4dc7286554a92 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 169 324 7.1E-20 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_B00316 d1c9dcb5f25ad5dceea4dc7286554a92 556 Gene3D G3DSA:3.40.190.10 115 357 9.0E-33 T 12-10-2018 vfu_B00316 d1c9dcb5f25ad5dceea4dc7286554a92 556 Pfam PF12793 Sugar transport-related sRNA regulator N-term 13 111 3.0E-16 T 12-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain vfu_A02044 cc1c0b822bb5690914c04469eeec9a06 113 Gene3D G3DSA:3.30.2320.80 1 113 2.9E-31 T 12-10-2018 vfu_A02044 cc1c0b822bb5690914c04469eeec9a06 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.7E-31 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 vfu_A02044 cc1c0b822bb5690914c04469eeec9a06 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 20.67 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 vfu_A02044 cc1c0b822bb5690914c04469eeec9a06 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 1.7E-30 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 vfu_A02044 cc1c0b822bb5690914c04469eeec9a06 113 PIRSF PIRSF004761 1 113 7.0E-33 T 12-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 vfu_B01432 670b9b319c4fde0db15ff1790e6db332 375 SUPERFAMILY SSF52096 13 343 1.32E-56 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01432 670b9b319c4fde0db15ff1790e6db332 375 Gene3D G3DSA:3.90.226.10 4 374 5.3E-116 T 12-10-2018 vfu_B01432 670b9b319c4fde0db15ff1790e6db332 375 Pfam PF16113 Enoyl-CoA hydratase/isomerase 19 357 2.8E-109 T 12-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 vfu_A01878 e59877242fa4194bf22ce59a0dc5e0b8 279 Pfam PF02634 FdhD/NarQ family 35 266 1.8E-74 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A01878 e59877242fa4194bf22ce59a0dc5e0b8 279 PIRSF PIRSF015626 1 271 4.3E-100 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A01878 e59877242fa4194bf22ce59a0dc5e0b8 279 Gene3D G3DSA:3.40.140.10 123 274 2.1E-41 T 12-10-2018 vfu_A01878 e59877242fa4194bf22ce59a0dc5e0b8 279 SUPERFAMILY SSF53927 15 266 3.31E-71 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A01878 e59877242fa4194bf22ce59a0dc5e0b8 279 Gene3D G3DSA:3.10.20.10 36 118 1.7E-10 T 12-10-2018 vfu_A01878 e59877242fa4194bf22ce59a0dc5e0b8 279 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 15 267 26.298 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A00198 251aae3322ff0e1ae305ca6c9f30665c 41 Gene3D G3DSA:1.20.120.1630 1 39 1.0E-8 T 12-10-2018 vfu_A01311 f8945ecd5128b76daa28357be7018234 267 SUPERFAMILY SSF56752 1 260 2.35E-69 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 vfu_A01311 f8945ecd5128b76daa28357be7018234 267 Gene3D G3DSA:3.20.10.10 112 267 3.5E-52 T 12-10-2018 vfu_A01311 f8945ecd5128b76daa28357be7018234 267 Pfam PF01063 Amino-transferase class IV 24 246 2.3E-46 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 vfu_A01311 f8945ecd5128b76daa28357be7018234 267 Gene3D G3DSA:3.30.470.10 1 107 6.8E-27 T 12-10-2018 vfu_A01311 f8945ecd5128b76daa28357be7018234 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 vfu_A01311 f8945ecd5128b76daa28357be7018234 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.4E-101 T 12-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 SUPERFAMILY SSF52304 4 145 1.44E-62 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 Pfam PF01220 Dehydroquinase class II 6 142 1.5E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 Gene3D G3DSA:3.40.50.9100 1 149 2.3E-67 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-60 T 12-10-2018 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 75.348 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 PIRSF PIRSF001399 3 149 8.3E-61 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A00067 593fa4068baba1194a58c48f58156e3b 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 5.7E-66 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 Gene3D G3DSA:3.30.450.20 29 203 1.3E-47 T 12-10-2018 vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 Gene3D G3DSA:3.30.565.10 313 448 1.0E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 PIRSF PIRSF037314 1 455 7.1E-184 T 12-10-2018 IPR017171 Signal transduction histidine kinase, MctS vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 SMART SM00387 354 448 3.4E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 Pfam PF17200 Single Cache domain 2 45 192 8.5E-44 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 SMART SM01049 42 133 3.5E-30 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 SUPERFAMILY SSF55874 324 444 4.85E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 446 5.4E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01758 1597e9fe92e33310b4aa9bbbc73e5452 455 Pfam PF07730 Histidine kinase 250 315 1.2E-15 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 SUPERFAMILY SSF52540 281 516 2.75E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 544 561 4.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 561 581 4.3E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Gene3D G3DSA:1.10.10.60 542 581 2.6E-11 T 12-10-2018 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Pfam PF02954 Bacterial regulatory protein, Fis family 546 576 2.1E-9 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Gene3D G3DSA:3.40.50.300 264 449 4.7E-57 T 12-10-2018 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 SUPERFAMILY SSF46689 486 580 4.87E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Pfam PF01590 GAF domain 90 183 1.9E-7 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 SMART SM00382 297 441 1.3E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Pfam PF00158 Sigma-54 interaction domain 281 442 1.9E-60 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 301 314 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Gene3D G3DSA:1.10.8.60 450 524 3.1E-11 T 12-10-2018 vfu_B00565 d2c308f3761daab35d9d072a6b248f41 582 Gene3D G3DSA:3.30.450.40 2 187 2.9E-44 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00002 d596fbb5e681696463f9c2c48d43f555 411 Pfam PF13091 PLD-like domain 61 167 2.7E-10 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 vfu_B00002 d596fbb5e681696463f9c2c48d43f555 411 Gene3D G3DSA:3.30.870.10 45 190 4.3E-21 T 12-10-2018 vfu_B00002 d596fbb5e681696463f9c2c48d43f555 411 SUPERFAMILY SSF56024 65 176 3.92E-10 T 12-10-2018 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 Gene3D G3DSA:3.40.50.300 6 224 1.5E-68 T 12-10-2018 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 SMART SM00382 31 214 5.5E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 SUPERFAMILY SSF50331 240 348 1.16E-10 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 Pfam PF00005 ABC transporter 22 164 1.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 Gene3D G3DSA:2.40.50.140 285 320 7.5E-14 T 12-10-2018 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 Pfam PF08402 TOBE domain 278 348 8.7E-5 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 4 356 2.0E-154 T 12-10-2018 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 SUPERFAMILY SSF52540 7 246 4.41E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00118 9efca09fc0cdacb294fb6f58b5077380 366 Gene3D G3DSA:2.40.50.940 225 284 7.5E-14 T 12-10-2018 vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 Gene3D G3DSA:3.40.50.300 2 289 9.6E-80 T 12-10-2018 vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 SUPERFAMILY SSF50331 248 334 7.37E-7 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 SUPERFAMILY SSF52540 4 240 9.16E-86 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 Pfam PF08402 TOBE domain 257 330 1.5E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 Pfam PF00005 ABC transporter 20 161 8.4E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01154 2875e881835f3cbbf5cdb3bdd551ebb9 339 SMART SM00382 28 211 1.9E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00104 5f79132e4c295ce52b3ba473467a7052 467 Gene3D G3DSA:1.10.220.70 58 143 8.7E-33 T 12-10-2018 vfu_B00104 5f79132e4c295ce52b3ba473467a7052 467 PIRSF PIRSF018788 3 460 8.1E-237 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 vfu_B00104 5f79132e4c295ce52b3ba473467a7052 467 Gene3D G3DSA:3.20.20.70 144 454 7.1E-146 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00104 5f79132e4c295ce52b3ba473467a7052 467 Gene3D G3DSA:2.30.170.30 3 56 2.8E-24 T 12-10-2018 vfu_B00104 5f79132e4c295ce52b3ba473467a7052 467 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 446 1.6E-222 T 12-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 Pfam PF12833 Helix-turn-helix domain 172 248 8.5E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 SUPERFAMILY SSF46689 149 199 1.16E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 202 244 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 Gene3D G3DSA:2.60.120.10 1 73 2.2E-7 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01232 d80cfe56120472616626ae267dc603bc 248 SUPERFAMILY SSF51215 4 136 2.35E-10 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_B01232 d80cfe56120472616626ae267dc603bc 248 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 2.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 2.1E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 Gene3D G3DSA:1.10.10.60 198 248 4.0E-18 T 12-10-2018 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 SMART SM00342 165 248 2.4E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 Pfam PF02311 AraC-like ligand binding domain 2 130 5.3E-12 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 Gene3D G3DSA:1.10.10.60 147 197 2.4E-12 T 12-10-2018 vfu_B01232 d80cfe56120472616626ae267dc603bc 248 SUPERFAMILY SSF46689 201 248 4.93E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00414 61dd4e09868468c27382981c6382d406 441 SUPERFAMILY SSF51905 1 421 4.13E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00414 61dd4e09868468c27382981c6382d406 441 PIRSF PIRSF000141 2 428 4.0E-175 T 12-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 vfu_B00414 61dd4e09868468c27382981c6382d406 441 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 2 426 47.945 T 12-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 vfu_B00414 61dd4e09868468c27382981c6382d406 441 Pfam PF00890 FAD binding domain 5 410 1.2E-60 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_B00414 61dd4e09868468c27382981c6382d406 441 Gene3D G3DSA:3.50.50.60 3 83 9.0E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00414 61dd4e09868468c27382981c6382d406 441 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 4 421 4.0E-181 T 12-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 Gene3D G3DSA:1.10.10.10 1 84 6.5E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 Pfam PF03466 LysR substrate binding domain 87 285 9.8E-29 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.9E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 SUPERFAMILY SSF53850 88 293 1.36E-28 T 12-10-2018 vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 SUPERFAMILY SSF46785 1 87 1.76E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00477 5a6dbca8be7c5c37b704dd387fad0518 300 Gene3D G3DSA:3.40.190.290 91 296 3.7E-32 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 4.0E-272 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 136 323 1.66E-19 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.2090.10 698 786 6.1E-285 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.70.1440 648 843 6.1E-285 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82866 290 489 4.97E-47 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.70.1320 134 325 6.1E-285 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 41 130 2.17E-23 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.70.1430 555 647 6.1E-285 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82714 701 783 5.36E-18 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.2090.10 178 268 6.1E-285 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:1.20.1640.10 10 500 6.1E-285 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:3.30.70.1430 40 794 6.1E-285 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82714 182 263 1.03E-16 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82693 553 650 8.63E-19 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 Gene3D G3DSA:1.20.1640.10 501 1001 6.1E-285 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 SUPERFAMILY SSF82866 782 1008 1.31E-45 T 12-10-2018 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00253 9c4b6a34187d51b1f6161fb4a14fc015 1040 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.2E-73 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 Pfam PF00571 CBS domain 345 392 9.3E-8 T 12-10-2018 IPR000644 CBS domain vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 SUPERFAMILY SSF52540 37 271 2.57E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 Gene3D G3DSA:3.40.50.300 32 298 6.1E-80 T 12-10-2018 vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 SMART SM00382 53 242 9.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 9.0E-152 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 Pfam PF00005 ABC transporter 44 192 5.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 Gene3D G3DSA:3.10.580.10 299 395 3.7E-9 T 12-10-2018 vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 SUPERFAMILY SSF54631 286 392 1.04E-15 T 12-10-2018 vfu_B00623 a966669d59980dc3bf9896db5d583c7d 395 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 Pfam PF05552 Conserved TM helix 21 69 1.9E-11 T 12-10-2018 IPR008910 Conserved TM helix vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 SUPERFAMILY SSF50182 120 185 7.85E-17 T 12-10-2018 IPR010920 LSM domain superfamily vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 Gene3D G3DSA:2.30.30.60 135 184 6.4E-22 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 SUPERFAMILY SSF82861 33 118 2.88E-17 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 SUPERFAMILY SSF82689 187 284 6.28E-35 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 Gene3D G3DSA:3.30.70.100 185 279 5.8E-30 T 12-10-2018 vfu_A03034 72d48073ad3f87177f65e49e69aaeabb 287 Pfam PF00924 Mechanosensitive ion channel 77 274 9.3E-58 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 SMART SM00482 416 624 2.4E-19 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 551 562 2.2E-20 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 579 595 2.2E-20 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 388 410 2.2E-20 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 607 620 2.2E-20 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 PRINTS PR00868 DNA-polymerase family A (pol I) signature 492 517 2.2E-20 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 SUPERFAMILY SSF56672 262 656 2.78E-70 T 12-10-2018 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:3.30.70.370 397 654 1.5E-49 T 12-10-2018 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 Gene3D G3DSA:1.10.150.20 436 586 1.5E-49 T 12-10-2018 vfu_A03008 adaf983c5e7b2ca5eb1990dba021bd5b 676 Pfam PF00476 DNA polymerase family A 293 657 3.8E-51 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_B00394 1b69f9657de4a9b2805e6f657aabd8ed 574 Gene3D G3DSA:3.40.50.300 65 297 2.5E-21 T 12-10-2018 vfu_B00394 1b69f9657de4a9b2805e6f657aabd8ed 574 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 8 59 6.8E-8 T 12-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 vfu_B00394 1b69f9657de4a9b2805e6f657aabd8ed 574 Pfam PF03237 Terminase-like family 155 365 5.0E-39 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type vfu_B00394 1b69f9657de4a9b2805e6f657aabd8ed 574 Gene3D G3DSA:3.30.420.240 405 553 3.4E-8 T 12-10-2018 vfu_B00394 1b69f9657de4a9b2805e6f657aabd8ed 574 Pfam PF17289 Terminase RNaseH-like domain 396 557 8.9E-26 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like vfu_B00047 e534ac89a450294c8b3e0bcc22137f1a 72 Gene3D G3DSA:1.10.720.30 14 71 9.8E-31 T 12-10-2018 IPR036361 SAP domain superfamily vfu_B00047 e534ac89a450294c8b3e0bcc22137f1a 72 Pfam PF09905 DNA-binding protein VF530 6 68 1.7E-35 T 12-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 vfu_B00724 ab82378f9f304b3366e4497c248d0fbb 134 Gene3D G3DSA:3.10.450.10 51 130 1.3E-8 T 12-10-2018 vfu_B00724 ab82378f9f304b3366e4497c248d0fbb 134 Pfam PF00031 Cystatin domain 53 118 6.1E-7 T 12-10-2018 IPR000010 Cystatin domain GO:0004869 vfu_B00724 ab82378f9f304b3366e4497c248d0fbb 134 SUPERFAMILY SSF54403 51 120 9.96E-15 T 12-10-2018 vfu_B00463 bd61b81b0815669548bf7905a922572f 281 SUPERFAMILY SSF51735 3 230 1.94E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00463 bd61b81b0815669548bf7905a922572f 281 Gene3D G3DSA:3.90.25.10 138 257 2.1E-61 T 12-10-2018 vfu_B00463 bd61b81b0815669548bf7905a922572f 281 Pfam PF13460 NAD(P)H-binding 8 185 1.0E-22 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_B00463 bd61b81b0815669548bf7905a922572f 281 Gene3D G3DSA:3.40.50.720 5 194 2.1E-61 T 12-10-2018 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 Gene3D G3DSA:3.40.605.10 17 465 4.7E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 Pfam PF00171 Aldehyde dehydrogenase family 18 469 3.9E-166 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 Gene3D G3DSA:3.40.309.10 255 442 4.7E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 SUPERFAMILY SSF53720 16 473 1.57E-161 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_A01048 e62bd78a569114b3924dc8c16f878ea5 475 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 2.6E-198 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 vfu_A00613 53774bf3add6160fe5daa1a296b2a11f 144 Pfam PF00581 Rhodanese-like domain 41 135 2.4E-17 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A00613 53774bf3add6160fe5daa1a296b2a11f 144 SUPERFAMILY SSF52821 16 143 1.44E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A00613 53774bf3add6160fe5daa1a296b2a11f 144 SMART SM00450 40 138 2.6E-18 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_A00613 53774bf3add6160fe5daa1a296b2a11f 144 Gene3D G3DSA:3.40.250.10 21 143 1.4E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A01641 c85f47f17b159d4429b8916db332e5a8 296 Gene3D G3DSA:3.40.190.290 93 295 4.2E-42 T 12-10-2018 vfu_A01641 c85f47f17b159d4429b8916db332e5a8 296 SUPERFAMILY SSF53850 91 293 2.9E-28 T 12-10-2018 vfu_A01641 c85f47f17b159d4429b8916db332e5a8 296 SUPERFAMILY SSF46785 3 85 5.39E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01641 c85f47f17b159d4429b8916db332e5a8 296 Gene3D G3DSA:1.10.10.10 1 89 3.2E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01641 c85f47f17b159d4429b8916db332e5a8 296 Pfam PF03466 LysR substrate binding domain 91 289 4.1E-21 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A01641 c85f47f17b159d4429b8916db332e5a8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01036 a8a133efd84066c921def4ef09c2543b 625 SUPERFAMILY SSF63829 287 592 1.18E-14 T 12-10-2018 vfu_B01036 a8a133efd84066c921def4ef09c2543b 625 Gene3D G3DSA:2.120.10.30 502 622 2.4E-5 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like vfu_B01036 a8a133efd84066c921def4ef09c2543b 625 Pfam PF05787 Bacterial protein of unknown function (DUF839) 56 592 1.6E-201 T 12-10-2018 IPR008557 Protein of unknown function DUF839 vfu_B00317 d08626b5dcce09b0a477ccdf693ef5af 189 Pfam PF01389 OmpA-like transmembrane domain 4 189 2.0E-25 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 vfu_B00317 d08626b5dcce09b0a477ccdf693ef5af 189 Gene3D G3DSA:2.40.160.20 1 189 4.6E-39 T 12-10-2018 vfu_B00317 d08626b5dcce09b0a477ccdf693ef5af 189 SUPERFAMILY SSF56925 4 188 2.88E-28 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 8.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 8.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 8.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 8.1E-21 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 SUPERFAMILY SSF46785 5 85 2.31E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 SMART SM00418 5 83 3.5E-25 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 Pfam PF01022 Bacterial regulatory protein, arsR family 12 56 2.9E-11 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00451 6b96e2e393164b5796507521595d7ce0 111 Gene3D G3DSA:1.10.10.10 3 89 6.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 SUPERFAMILY SSF81901 65 282 8.11E-21 T 12-10-2018 vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 Pfam PF08238 Sel1 repeat 79 97 0.061 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 Pfam PF08238 Sel1 repeat 195 205 12.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 Pfam PF08238 Sel1 repeat 208 242 5.6E-5 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 Pfam PF08238 Sel1 repeat 137 167 22.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 Gene3D G3DSA:1.25.40.10 189 317 3.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 Gene3D G3DSA:1.25.40.10 29 188 5.8E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 SMART SM00671 67 97 160.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 SMART SM00671 135 170 14.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 SMART SM00671 171 206 80.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B01043 ffd8d8d146663ff4e57ee76fa7ad764f 387 SMART SM00671 207 242 4.6E-4 T 12-10-2018 IPR006597 Sel1-like repeat vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 321 2.3E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 Gene3D G3DSA:3.40.250.10 471 564 5.9E-25 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.7E-23 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.7E-23 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.7E-23 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.7E-23 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.7E-23 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 SUPERFAMILY SSF52821 458 563 3.01E-24 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 SUPERFAMILY SSF51905 1 338 5.66E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 Gene3D G3DSA:3.50.50.60 115 461 7.2E-186 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 SUPERFAMILY SSF55424 344 467 1.89E-34 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 451 1.7E-15 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 Gene3D G3DSA:3.50.50.60 3 361 7.2E-186 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 SMART SM00450 473 567 6.3E-14 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.9E-19 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 1.9E-19 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 1.9E-19 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.9E-19 T 12-10-2018 vfu_B00289 9d18ddca5db13041991e0c4a6f103098 567 Pfam PF00581 Rhodanese-like domain 484 562 7.6E-10 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00314 5cb37016b5a66c3a1e39fe4986416d05 191 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 184 3.3E-71 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal vfu_B00314 5cb37016b5a66c3a1e39fe4986416d05 191 SUPERFAMILY SSF48695 17 190 8.5E-56 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily vfu_B00314 5cb37016b5a66c3a1e39fe4986416d05 191 Gene3D G3DSA:1.10.3820.10 10 187 1.1E-33 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily vfu_B00314 5cb37016b5a66c3a1e39fe4986416d05 191 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 4 185 1.7E-95 T 12-10-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 vfu_B00314 5cb37016b5a66c3a1e39fe4986416d05 191 PIRSF PIRSF000013 1 191 1.7E-95 T 12-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 85 192 1.6E-30 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 Gene3D G3DSA:1.10.357.10 6 197 7.1E-44 T 12-10-2018 vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 198 93.126 T 12-10-2018 IPR017757 Transcriptional repressor BetI vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 SUPERFAMILY SSF48498 86 192 4.56E-16 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 3.4E-73 T 12-10-2018 IPR017757 Transcriptional repressor BetI vfu_A00381 92a8943ede14779fbf1d929783d6b216 200 SUPERFAMILY SSF46689 5 79 4.26E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 143 4.6E-37 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 SMART SM00226 3 145 4.8E-54 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 SUPERFAMILY SSF52788 1 146 2.75E-42 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 6.0E-28 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 6.0E-28 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 6.0E-28 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 6.0E-28 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 101 114 6.0E-28 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A00127 b9069bfb2e37951c8ee046c131cf2c5e 146 Gene3D G3DSA:3.40.50.2300 1 146 5.4E-51 T 12-10-2018 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Gene3D G3DSA:3.40.120.10 203 323 3.4E-20 T 12-10-2018 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 204 313 1.7E-24 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 440 7.3E-17 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 SUPERFAMILY SSF53738 302 445 2.43E-30 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 4.8E-7 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 4.8E-7 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 4.8E-7 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 SUPERFAMILY SSF53738 29 214 1.26E-42 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 177 2.4E-42 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Gene3D G3DSA:3.30.310.50 453 554 2.2E-6 T 12-10-2018 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Gene3D G3DSA:3.40.120.10 32 184 2.1E-47 T 12-10-2018 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 538 3.4E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 Gene3D G3DSA:3.40.120.10 324 444 6.0E-32 T 12-10-2018 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 SUPERFAMILY SSF55957 460 542 1.31E-12 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B01099 b7c533289851c087b2a5adc59c781d2a 568 SUPERFAMILY SSF53738 202 312 8.63E-21 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_B00481 a4b7ccd4b510f9d143bca4ed4a28c2f8 328 Pfam PF00296 Luciferase-like monooxygenase 22 303 5.4E-38 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 vfu_B00481 a4b7ccd4b510f9d143bca4ed4a28c2f8 328 Gene3D G3DSA:3.20.20.30 4 328 4.3E-106 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 vfu_B00481 a4b7ccd4b510f9d143bca4ed4a28c2f8 328 SUPERFAMILY SSF51679 5 326 2.12E-86 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 vfu_B00481 a4b7ccd4b510f9d143bca4ed4a28c2f8 328 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 326 3.3E-132 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 vfu_B00569 0d17d8d91e86be48b775f335bf15fde1 481 Pfam PF03929 PepSY-associated TM region 24 418 1.9E-61 T 12-10-2018 IPR005625 PepSY-associated TM protein vfu_A01279 adce212f7e1897c393c99ef927a58fd1 317 Pfam PF03547 Membrane transport protein 164 306 1.9E-8 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 vfu_A01279 adce212f7e1897c393c99ef927a58fd1 317 Pfam PF03547 Membrane transport protein 4 136 2.7E-9 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 SUPERFAMILY SSF55060 205 382 5.28E-52 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 Pfam PF00288 GHMP kinases N terminal domain 116 181 3.0E-10 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PIRSF PIRSF000530 1 385 5.8E-127 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 9.0E-148 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 Pfam PF10509 Galactokinase galactose-binding signature 11 59 1.8E-21 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 Pfam PF08544 GHMP kinases C terminal 280 353 8.8E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 Gene3D G3DSA:3.30.230.10 23 202 1.1E-131 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 26 50 5.5E-44 T 12-10-2018 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 163 182 5.5E-44 T 12-10-2018 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 120 142 5.5E-44 T 12-10-2018 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00959 Mevalonate kinase family signature 329 346 5.5E-44 T 12-10-2018 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 Gene3D G3DSA:3.30.70.890 203 358 1.1E-131 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 SUPERFAMILY SSF54211 2 204 3.04E-63 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 264 278 9.9E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 93 104 9.9E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 28 46 9.9E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 PRINTS PR00473 Galactokinase signature 113 131 9.9E-30 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 Hamap MF_00246 Galactokinase [galK]. 26 382 43.99 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_A01170 ea2df0f56761e15a6c8b06fcff3597ff 387 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 Gene3D G3DSA:1.10.287.130 1 104 1.8E-17 T 12-10-2018 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 Pfam PF00512 His Kinase A (phospho-acceptor) domain 45 106 4.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 SUPERFAMILY SSF158472 2 39 3.92E-5 T 12-10-2018 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 154 262 7.1E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 Gene3D G3DSA:3.30.565.10 116 264 8.5E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 SUPERFAMILY SSF47384 28 108 8.63E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 SUPERFAMILY SSF55874 98 263 8.38E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 SMART SM00388 45 109 2.2E-9 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 SMART SM00387 153 264 7.9E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 225 243 9.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 190 204 9.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B00777 1fb024e6c82f68e9a19912fc4836480f 264 PRINTS PR00344 Bacterial sensor protein C-terminal signature 208 218 9.9E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 PIRSF PIRSF000774 1 486 9.5E-154 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 Pfam PF04963 Sigma-54 factor, core binding domain 125 314 3.1E-60 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 3.3E-155 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 Gene3D G3DSA:1.10.10.1330 127 245 2.0E-23 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 4.7E-17 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 459 477 3.4E-30 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 385 397 3.4E-30 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 401 412 3.4E-30 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 PRINTS PR00045 Sigma-54 factor signature 197 214 3.4E-30 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 Gene3D G3DSA:1.10.10.60 426 483 2.6E-23 T 12-10-2018 vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 1.2E-72 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding vfu_A00733 9f40ead6e1889635346c75df1dc5f17f 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 vfu_B00020 1b58e17f93efa1dff4534783d197879b 177 SUPERFAMILY SSF53271 5 173 2.49E-33 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_B00020 1b58e17f93efa1dff4534783d197879b 177 Pfam PF00156 Phosphoribosyl transferase domain 12 136 9.4E-15 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_B00020 1b58e17f93efa1dff4534783d197879b 177 Gene3D G3DSA:3.40.50.2020 2 177 7.5E-36 T 12-10-2018 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 23 468 1.9E-206 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 Gene3D G3DSA:3.40.309.10 255 442 2.0E-180 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 Gene3D G3DSA:3.40.605.10 20 465 2.0E-180 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 SUPERFAMILY SSF53720 21 473 9.42E-164 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A02169 f566ac90de0a22cd3b51f060e75449c8 477 Pfam PF00171 Aldehyde dehydrogenase family 21 468 1.8E-165 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 2.1E-70 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 Pfam PF01545 Cation efflux family 15 206 9.7E-45 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 SUPERFAMILY SSF160240 210 288 3.66E-23 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 3.0E-25 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 Gene3D G3DSA:3.30.70.1350 207 290 1.3E-30 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 Gene3D G3DSA:1.20.1510.10 8 206 3.0E-61 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily vfu_A00575 8ad2ea16bfd2f49160019a0049fdca1e 302 SUPERFAMILY SSF161111 8 207 1.18E-51 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily vfu_A02161 15b1f463e00397f05e0b265046898b02 255 Gene3D G3DSA:3.40.1550.10 36 202 5.0E-20 T 12-10-2018 IPR028976 CheC-like superfamily vfu_A02161 15b1f463e00397f05e0b265046898b02 255 Pfam PF11813 Protein of unknown function (DUF3334) 32 255 1.3E-115 T 12-10-2018 IPR024513 Protein of unknown function DUF3334 vfu_A02161 15b1f463e00397f05e0b265046898b02 255 SUPERFAMILY SSF103039 39 202 1.01E-23 T 12-10-2018 IPR028976 CheC-like superfamily vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 1.2E-9 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 SUPERFAMILY SSF55073 211 366 1.57E-45 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 SMART SM00267 195 367 6.5E-53 T 12-10-2018 IPR000160 GGDEF domain vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 1.2E-42 T 12-10-2018 IPR000160 GGDEF domain vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 Gene3D G3DSA:3.30.70.270 191 369 4.6E-53 T 12-10-2018 vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 5.3E-30 T 12-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 Gene3D G3DSA:1.20.120.50 1 138 3.3E-28 T 12-10-2018 IPR035938 Hemerythrin-like superfamily vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 SUPERFAMILY SSF47188 1 131 1.7E-26 T 12-10-2018 IPR035938 Hemerythrin-like superfamily vfu_A02139 95e9eaa279d1401eea8a3e11b70a53a5 382 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 367 7.9E-47 T 12-10-2018 IPR000160 GGDEF domain vfu_A02443 ead52b492d2d1d934cfd6498a2a35799 433 Pfam PF03313 Serine dehydratase alpha chain 161 424 3.9E-94 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit vfu_A02443 ead52b492d2d1d934cfd6498a2a35799 433 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 1 425 3.6E-182 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 vfu_A02443 ead52b492d2d1d934cfd6498a2a35799 433 Gene3D G3DSA:3.30.1330.90 1 134 7.2E-38 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 vfu_A02443 ead52b492d2d1d934cfd6498a2a35799 433 Pfam PF03315 Serine dehydratase beta chain 1 130 4.4E-36 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 vfu_A02443 ead52b492d2d1d934cfd6498a2a35799 433 SUPERFAMILY SSF143548 1 132 9.68E-37 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 233 4.8E-22 T 12-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 Gene3D G3DSA:3.40.50.300 6 240 2.7E-57 T 12-10-2018 vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 Gene3D G3DSA:3.40.50.880 254 435 2.3E-18 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 484 3.8E-158 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 SUPERFAMILY SSF52317 194 410 1.07E-36 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 493 200.157 T 12-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 440 2.6E-56 T 12-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 vfu_B00354 58f854ac63e45b741b1bca6ade30e1e2 494 SUPERFAMILY SSF52540 7 239 2.77E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 SMART SM00354 6 76 2.4E-27 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 Gene3D G3DSA:1.10.260.40 1 64 5.1E-16 T 12-10-2018 vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 SUPERFAMILY SSF47413 6 64 8.84E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 Gene3D G3DSA:3.40.50.2300 67 308 2.1E-69 T 12-10-2018 vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 308 3.2E-29 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 SUPERFAMILY SSF53822 64 319 3.64E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 Gene3D G3DSA:3.40.50.2300 164 292 2.1E-69 T 12-10-2018 vfu_A00532 a27679c400ba3ac0d7a93767417dbea0 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.5E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01460 ede7d53e4ff1b57a79477d10955e9c58 144 Gene3D G3DSA:3.40.630.30 2 137 3.6E-37 T 12-10-2018 vfu_A01460 ede7d53e4ff1b57a79477d10955e9c58 144 SUPERFAMILY SSF55729 2 134 1.18E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01460 ede7d53e4ff1b57a79477d10955e9c58 144 Pfam PF00583 Acetyltransferase (GNAT) family 30 125 2.1E-16 T 12-10-2018 IPR000182 GNAT domain vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 Gene3D G3DSA:3.40.50.720 1 245 8.7E-83 T 12-10-2018 vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 188 9.6E-4 T 12-10-2018 vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 4.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 4.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 4.2E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 SUPERFAMILY SSF51735 4 244 3.94E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B01436 1c6008a84734fa36f2a7072e24e69183 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 4.1E-63 T 12-10-2018 vfu_B01111 a63a73384b36ea8f8c31b2835c70472c 350 PIRSF PIRSF001361 1 350 1.3E-162 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_B01111 a63a73384b36ea8f8c31b2835c70472c 350 SUPERFAMILY SSF51569 6 347 5.65E-136 T 12-10-2018 vfu_B01111 a63a73384b36ea8f8c31b2835c70472c 350 Gene3D G3DSA:3.20.20.70 1 349 1.4E-164 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B01111 a63a73384b36ea8f8c31b2835c70472c 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.1E-167 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_B01111 a63a73384b36ea8f8c31b2835c70472c 350 Pfam PF00793 DAHP synthetase I family 39 337 5.3E-102 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 39 531 2.4E-182 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Gene3D G3DSA:1.10.101.10 741 827 1.8E-13 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 SUPERFAMILY SSF53955 833 1069 1.01E-28 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 SUPERFAMILY SSF47090 747 822 6.28E-10 T 12-10-2018 IPR036365 PGBD-like superfamily vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 SUPERFAMILY SSF69279 10 195 2.83E-48 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Gene3D G3DSA:3.30.1920.30 233 296 1.6E-84 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Gene3D G3DSA:2.30.110.50 15 341 1.6E-84 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Pfam PF05954 Phage late control gene D protein (GPD) 45 339 4.6E-76 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Gene3D G3DSA:3.55.50.10 109 200 1.6E-84 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 40 513 1.1E-131 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Pfam PF01471 Putative peptidoglycan binding domain 754 795 9.8E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 SUPERFAMILY SSF69279 201 375 1.29E-44 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 Gene3D G3DSA:2.40.50.230 365 466 4.3E-40 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 SUPERFAMILY SSF69255 374 461 1.39E-32 T 12-10-2018 vfu_B01191 56b50dc199fc100918f80bde3a3291a3 1073 SUPERFAMILY SSF69349 452 633 5.34E-44 T 12-10-2018 vfu_B00244 6060d6fe82e27c2970694cb21bce0477 266 Pfam PF03466 LysR substrate binding domain 55 250 1.8E-43 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00244 6060d6fe82e27c2970694cb21bce0477 266 Gene3D G3DSA:3.40.190.10 57 242 4.7E-36 T 12-10-2018 vfu_B00244 6060d6fe82e27c2970694cb21bce0477 266 Gene3D G3DSA:3.40.190.10 130 233 4.7E-36 T 12-10-2018 vfu_B00244 6060d6fe82e27c2970694cb21bce0477 266 SUPERFAMILY SSF53850 55 251 4.46E-38 T 12-10-2018 vfu_B00244 6060d6fe82e27c2970694cb21bce0477 266 Gene3D G3DSA:1.10.10.10 1 48 1.7E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00244 6060d6fe82e27c2970694cb21bce0477 266 SUPERFAMILY SSF46785 2 76 1.36E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01611 81158fe3271e8814235213a7678870c7 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 4.9E-155 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 vfu_A01611 81158fe3271e8814235213a7678870c7 426 PIRSF PIRSF000505 1 426 3.8E-156 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 vfu_A01611 81158fe3271e8814235213a7678870c7 426 Gene3D G3DSA:3.65.10.10 20 224 9.7E-162 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 vfu_A01611 81158fe3271e8814235213a7678870c7 426 SUPERFAMILY SSF55205 1 424 2.09E-143 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 vfu_A01611 81158fe3271e8814235213a7678870c7 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 vfu_A01611 81158fe3271e8814235213a7678870c7 426 Gene3D G3DSA:3.65.10.10 242 419 9.7E-162 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 vfu_A01611 81158fe3271e8814235213a7678870c7 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 425 2.1E-143 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 vfu_A01611 81158fe3271e8814235213a7678870c7 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.245 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 vfu_A01611 81158fe3271e8814235213a7678870c7 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 vfu_B01177 b371c00947b6b11154a45427a45f42f9 491 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 16 489 4.1E-213 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath vfu_B01177 b371c00947b6b11154a45427a45f42f9 491 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 65 488 1.8E-179 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath vfu_A02399 da563c7a547c75919a57776d536025cb 179 Gene3D G3DSA:3.40.50.1820 1 179 2.3E-19 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02399 da563c7a547c75919a57776d536025cb 179 SUPERFAMILY SSF53474 2 176 1.69E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02399 da563c7a547c75919a57776d536025cb 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.178 T 12-10-2018 IPR022987 Uncharacterised protein family UPF0227 vfu_A02399 da563c7a547c75919a57776d536025cb 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.8E-68 T 12-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA vfu_A02194 4fc7e572af007cc1244f35878b929aa3 275 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 6.1E-95 T 12-10-2018 IPR021246 Protein of unknown function DUF2797 vfu_B00173 20aa7f67030d92044fa6633dc569bbbe 216 SUPERFAMILY SSF161098 13 204 8.37E-39 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00173 20aa7f67030d92044fa6633dc569bbbe 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 1.3E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00173 20aa7f67030d92044fa6633dc569bbbe 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 1.8E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_B00173 20aa7f67030d92044fa6633dc569bbbe 216 Gene3D G3DSA:1.10.3720.10 5 213 2.6E-46 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01563 45838f01e19f8775b9290a9b3ca0592c 275 SMART SM00382 34 216 3.2E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01563 45838f01e19f8775b9290a9b3ca0592c 275 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01563 45838f01e19f8775b9290a9b3ca0592c 275 Gene3D G3DSA:3.40.50.300 3 273 1.3E-63 T 12-10-2018 vfu_A01563 45838f01e19f8775b9290a9b3ca0592c 275 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 4.5E-107 T 12-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 vfu_A01563 45838f01e19f8775b9290a9b3ca0592c 275 SUPERFAMILY SSF52540 6 233 3.75E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01563 45838f01e19f8775b9290a9b3ca0592c 275 Pfam PF00005 ABC transporter 25 166 4.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02113 6bb0c61f1d1f9c55105cd60745655f57 227 Gene3D G3DSA:3.40.50.720 1 226 1.1E-49 T 12-10-2018 vfu_A02113 6bb0c61f1d1f9c55105cd60745655f57 227 SUPERFAMILY SSF51735 5 208 2.82E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02113 6bb0c61f1d1f9c55105cd60745655f57 227 Pfam PF08732 HIM1 74 160 1.5E-11 T 12-10-2018 IPR014843 Protein Him1/Fmp52 vfu_B00848 e09661fa961c4c6a26279be8da3faa67 111 Pfam PF02001 Protein of unknown function DUF134 2 89 1.1E-23 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 vfu_B00848 e09661fa961c4c6a26279be8da3faa67 111 Gene3D G3DSA:1.10.10.10 28 83 3.5E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00848 e09661fa961c4c6a26279be8da3faa67 111 Hamap MF_00674 UPF0251 protein . 2 98 23.185 T 12-10-2018 IPR002852 Uncharacterised protein family UPF0251 vfu_B00848 e09661fa961c4c6a26279be8da3faa67 111 SUPERFAMILY SSF88659 33 81 2.18E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 3.9E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 SUPERFAMILY SSF46785 6 80 2.69E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.2E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 Gene3D G3DSA:3.40.190.10 103 291 8.2E-46 T 12-10-2018 vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 Gene3D G3DSA:1.10.10.10 6 93 1.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 Pfam PF03466 LysR substrate binding domain 90 295 8.6E-31 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 SUPERFAMILY SSF53850 91 298 4.5E-32 T 12-10-2018 vfu_A02869 aed42c74a591cd6fe0afe9cfbe026938 301 Gene3D G3DSA:3.40.190.10 165 264 8.2E-46 T 12-10-2018 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 652 0.0 T 12-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 SUPERFAMILY SSF56300 23 360 9.49E-89 T 12-10-2018 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 Gene3D G3DSA:3.60.21.10 22 360 1.6E-137 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_A00699 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 536 555 5.6E-30 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 221 238 5.6E-30 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 289 309 5.6E-30 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 28 46 5.6E-30 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 434 457 5.6E-30 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 PRINTS PR01607 Apyrase family signature 249 272 5.6E-30 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 3.7E-10 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 Gene3D G3DSA:3.90.780.10 417 592 5.4E-51 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 1.1E-19 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00699 04c48511a1c7893de311e905f2216e51 653 SUPERFAMILY SSF55816 361 603 1.44E-37 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A02383 ddc4880a26fa665e536b62e2e33151b4 422 Pfam PF04285 Protein of unknown function (DUF444) 3 420 1.5E-188 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 vfu_A02383 ddc4880a26fa665e536b62e2e33151b4 422 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 422 40.831 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 vfu_B01427 d6237405edbc02f40188c91e95cfc50c 122 SMART SM00422 4 71 1.2E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B01427 d6237405edbc02f40188c91e95cfc50c 122 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.0E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B01427 d6237405edbc02f40188c91e95cfc50c 122 SUPERFAMILY SSF46955 4 116 8.79E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_B01427 d6237405edbc02f40188c91e95cfc50c 122 Gene3D G3DSA:1.10.1660.10 1 122 3.6E-25 T 12-10-2018 vfu_A02450 02b40cc391a099915a7eaeca0386b604 220 SMART SM00563 38 160 2.7E-24 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A02450 02b40cc391a099915a7eaeca0386b604 220 Pfam PF01553 Acyltransferase 26 157 2.3E-18 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A02450 02b40cc391a099915a7eaeca0386b604 220 SUPERFAMILY SSF69593 13 209 4.45E-26 T 12-10-2018 vfu_A01080 1581cec5509edda99310c04246a485b0 150 Pfam PF07977 FabA-like domain 17 141 3.9E-40 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01080 1581cec5509edda99310c04246a485b0 150 SUPERFAMILY SSF54637 6 146 4.71E-50 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A01080 1581cec5509edda99310c04246a485b0 150 Gene3D G3DSA:3.10.129.10 2 150 1.1E-60 T 12-10-2018 vfu_A01080 1581cec5509edda99310c04246a485b0 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 5.3E-59 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01080 1581cec5509edda99310c04246a485b0 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.708 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A00732 bf1c33dea35304cbe05b30448bacc42b 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.0E-27 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 vfu_A00732 bf1c33dea35304cbe05b30448bacc42b 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 3.4E-32 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 vfu_A00732 bf1c33dea35304cbe05b30448bacc42b 95 SUPERFAMILY SSF69754 1 95 4.45E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like vfu_A00732 bf1c33dea35304cbe05b30448bacc42b 95 Gene3D G3DSA:3.30.160.100 1 95 1.3E-37 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 SMART SM00448 9 121 4.7E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 Pfam PF00072 Response regulator receiver domain 12 121 1.8E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 SMART SM00471 177 328 1.0E-9 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 Gene3D G3DSA:3.40.50.2300 3 133 1.5E-35 T 12-10-2018 vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 SUPERFAMILY SSF109604 158 357 5.97E-35 T 12-10-2018 vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 Pfam PF01966 HD domain 182 318 7.4E-20 T 12-10-2018 IPR006674 HD domain vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 SUPERFAMILY SSF52172 6 129 3.27E-37 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00259 9b41af4ad8bcd9e9ce9fa29409f8007f 370 Gene3D G3DSA:1.10.3210.10 155 370 4.7E-76 T 12-10-2018 vfu_A00520 4e5532948e03955bc7a36c73e9704c3b 169 SUPERFAMILY SSF103054 90 167 1.83E-22 T 12-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily vfu_A00520 4e5532948e03955bc7a36c73e9704c3b 169 PIRSF PIRSF006291 7 167 3.8E-41 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 vfu_A00520 4e5532948e03955bc7a36c73e9704c3b 169 Gene3D G3DSA:3.30.1360.100 89 169 5.9E-32 T 12-10-2018 vfu_A00520 4e5532948e03955bc7a36c73e9704c3b 169 Pfam PF04612 Type II secretion system (T2SS), protein M 10 166 6.1E-52 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 vfu_B00225 c5a082b6f4e404204e76c20668120134 126 Pfam PF11782 Protein of unknown function (DUF3319) 3 90 9.1E-43 T 12-10-2018 IPR021753 Protein of unknown function DUF3319 vfu_A00136 8365cb3014adee50cab1a6122e182753 361 Pfam PF04932 O-Antigen ligase 137 290 4.4E-23 T 12-10-2018 IPR007016 O-antigen ligase-related vfu_A01748 e787b9eb01fc42e91d400b2fe3aee032 358 PIRSF PIRSF028101 1 358 6.6E-154 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 vfu_A01748 e787b9eb01fc42e91d400b2fe3aee032 358 SUPERFAMILY SSF50969 56 351 2.16E-12 T 12-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like vfu_A01748 e787b9eb01fc42e91d400b2fe3aee032 358 Pfam PF07433 Protein of unknown function (DUF1513) 64 356 7.9E-107 T 12-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 vfu_A01748 e787b9eb01fc42e91d400b2fe3aee032 358 Gene3D G3DSA:2.130.10.10 15 209 2.0E-5 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_A01786 5ea5a9aafdf88dedb720caf938e68f52 340 Pfam PF05128 Domain of unknown function (DUF697) 176 334 2.8E-51 T 12-10-2018 IPR021147 Protein of unknown function DUF697 vfu_A01786 5ea5a9aafdf88dedb720caf938e68f52 340 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 50 334 5.0E-77 T 12-10-2018 IPR006507 Uncharacterised protein family UPF0283 vfu_A03117 82245f02ad6225e85cf102081f18a5a5 216 Pfam PF04612 Type II secretion system (T2SS), protein M 8 94 1.9E-8 T 12-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 vfu_A01344 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 SUPERFAMILY SSF56801 4 455 3.92E-88 T 12-10-2018 vfu_A01344 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Pfam PF00501 AMP-binding enzyme 5 360 1.9E-53 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A01344 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A01344 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Gene3D G3DSA:3.30.300.30 359 459 7.5E-15 T 12-10-2018 vfu_A01344 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 Gene3D G3DSA:3.40.50.12780 3 358 1.0E-70 T 12-10-2018 vfu_A01344 7e3d8cc2ad502c59d5d3d2ff9cc7c5d7 463 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 25 448 7.9E-131 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 475 60.721 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 PIRSF PIRSF001478 1 498 2.3E-234 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 SUPERFAMILY SSF53743 1 325 6.54E-114 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 SUPERFAMILY SSF50443 329 496 1.28E-63 T 12-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Gene3D G3DSA:3.40.50.10940 1 175 1.6E-76 T 12-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Pfam PF02610 L-arabinose isomerase 5 358 3.1E-165 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 361 474 9.7E-44 T 12-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 vfu_A00404 86c9fbb7c1f96f1ef977b9e3e7508ddb 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 304 1.0E-144 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Gene3D G3DSA:3.20.70.40 350 1138 0.0 T 12-10-2018 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Gene3D G3DSA:3.20.70.20 7 333 9.9E-59 T 12-10-2018 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 SUPERFAMILY SSF51998 6 308 5.04E-44 T 12-10-2018 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Pfam PF02901 Pyruvate formate lyase-like 8 85 4.4E-6 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Pfam PF02901 Pyruvate formate lyase-like 351 999 1.9E-218 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Pfam PF02901 Pyruvate formate lyase-like 104 319 3.3E-41 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Pfam PF01228 Glycine radical 1016 1119 3.0E-24 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 TIGRFAM TIGR04394 choline_CutC: choline trimethylamine-lyase 350 1138 0.0 T 12-10-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 Hamap MF_02058 Choline trimethylamine-lyase [cutC]. 346 1138 57.753 T 12-10-2018 IPR030897 Choline trimethylamine-lyase GO:0016829 MetaCyc: PWY-7167 vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 ProSitePatterns PS00850 Glycine radical domain signature. 1108 1116 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site vfu_A00327 1716134767f93d594df572f26fdb9be3 1138 SUPERFAMILY SSF51998 350 1135 6.87E-233 T 12-10-2018 vfu_B00131 2a93093414af8f0bee9ac7d71b3b7a2f 131 Gene3D G3DSA:3.30.1330.80 1 131 5.5E-47 T 12-10-2018 vfu_B00131 2a93093414af8f0bee9ac7d71b3b7a2f 131 SUPERFAMILY SSF117856 4 127 7.15E-36 T 12-10-2018 vfu_B00131 2a93093414af8f0bee9ac7d71b3b7a2f 131 Pfam PF03479 Domain of unknown function (DUF296) 4 105 2.0E-23 T 12-10-2018 IPR005175 PPC domain vfu_B00167 692c41f0568c0b7a1efff7f379f0f4f5 308 Pfam PF01522 Polysaccharide deacetylase 76 163 3.4E-11 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 vfu_B00167 692c41f0568c0b7a1efff7f379f0f4f5 308 SUPERFAMILY SSF88713 5 307 3.34E-87 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 vfu_B00167 692c41f0568c0b7a1efff7f379f0f4f5 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 6 308 3.0E-147 T 12-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 vfu_B00167 692c41f0568c0b7a1efff7f379f0f4f5 308 Gene3D G3DSA:3.20.20.370 1 308 2.4E-105 T 12-10-2018 vfu_A02775 df72edd99dbc26992500db8b77a04dc6 123 SUPERFAMILY SSF56014 16 105 9.55E-13 T 12-10-2018 vfu_A02775 df72edd99dbc26992500db8b77a04dc6 123 Pfam PF04551 GcpE protein 3 105 1.4E-27 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 vfu_A02775 df72edd99dbc26992500db8b77a04dc6 123 Gene3D G3DSA:3.30.413.10 13 113 6.5E-26 T 12-10-2018 vfu_B00177 48a5efff61cc6c06dc6a764957efd0ef 393 ProSitePatterns PS00571 Amidases signature. 107 138 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 vfu_B00177 48a5efff61cc6c06dc6a764957efd0ef 393 Pfam PF01425 Amidase 17 189 1.7E-48 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 vfu_B00177 48a5efff61cc6c06dc6a764957efd0ef 393 Gene3D G3DSA:3.90.1300.10 12 391 1.5E-78 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 vfu_B00177 48a5efff61cc6c06dc6a764957efd0ef 393 SUPERFAMILY SSF75304 19 389 2.35E-75 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 vfu_B00947 ddf1c8e81c5ab1d820a14fee0a57578c 210 SMART SM01007 8 187 1.9E-60 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal vfu_B00947 ddf1c8e81c5ab1d820a14fee0a57578c 210 Gene3D G3DSA:3.40.225.10 1 208 3.2E-60 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily vfu_B00947 ddf1c8e81c5ab1d820a14fee0a57578c 210 SUPERFAMILY SSF53639 1 205 2.75E-60 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily vfu_B00947 ddf1c8e81c5ab1d820a14fee0a57578c 210 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 185 7.8E-47 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 SUPERFAMILY SSF51998 222 738 5.8E-167 T 12-10-2018 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 3.5E-11 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 Pfam PF03477 ATP cone domain 6 92 6.9E-19 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 Gene3D G3DSA:3.20.70.20 78 742 6.2E-156 T 12-10-2018 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 SUPERFAMILY SSF48168 10 221 2.75E-74 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.1E-175 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.4E-37 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01739 3f6171012ca19b402e03dd301972bb96 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 5.5E-116 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_B01198 421f76775b0d73cbefe5acfa967452cc 292 SUPERFAMILY SSF53822 8 290 7.76E-86 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B01198 421f76775b0d73cbefe5acfa967452cc 292 Gene3D G3DSA:3.40.50.2300 32 278 2.2E-97 T 12-10-2018 vfu_B01198 421f76775b0d73cbefe5acfa967452cc 292 Gene3D G3DSA:3.40.50.2300 125 259 2.2E-97 T 12-10-2018 vfu_B01198 421f76775b0d73cbefe5acfa967452cc 292 Pfam PF13407 Periplasmic binding protein domain 28 277 1.5E-60 T 12-10-2018 IPR025997 Periplasmic binding protein vfu_B00723 cc8be17258670351b1c3b45d40c7978b 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 2.0E-14 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor vfu_B00723 cc8be17258670351b1c3b45d40c7978b 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 2.2E-31 T 12-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor vfu_A03109 bb5bee49d62bf7c0f3b45d81227cf9e4 191 Gene3D G3DSA:3.30.700.10 8 190 6.9E-10 T 12-10-2018 vfu_A03109 bb5bee49d62bf7c0f3b45d81227cf9e4 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03109 bb5bee49d62bf7c0f3b45d81227cf9e4 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 7.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03109 bb5bee49d62bf7c0f3b45d81227cf9e4 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 1.7E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03109 bb5bee49d62bf7c0f3b45d81227cf9e4 191 SUPERFAMILY SSF54523 8 166 8.63E-14 T 12-10-2018 vfu_B01072 9d44c4cac8d1f61f2ae52e6f9ddd8b81 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 5.6E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01072 9d44c4cac8d1f61f2ae52e6f9ddd8b81 287 SUPERFAMILY SSF161098 21 274 1.59E-42 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01072 9d44c4cac8d1f61f2ae52e6f9ddd8b81 287 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 15 283 2.5E-99 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 vfu_B01072 9d44c4cac8d1f61f2ae52e6f9ddd8b81 287 Gene3D G3DSA:1.10.3720.10 61 285 1.8E-35 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02811 4708c69f318bb9c07f7d1c3b6f2ee895 316 SUPERFAMILY SSF53850 30 312 2.85E-64 T 12-10-2018 vfu_A02811 4708c69f318bb9c07f7d1c3b6f2ee895 316 Gene3D G3DSA:3.40.190.10 32 303 8.1E-99 T 12-10-2018 vfu_A02811 4708c69f318bb9c07f7d1c3b6f2ee895 316 Gene3D G3DSA:3.40.190.10 117 259 8.1E-99 T 12-10-2018 vfu_A02811 4708c69f318bb9c07f7d1c3b6f2ee895 316 Pfam PF12849 PBP superfamily domain 28 287 1.4E-27 T 12-10-2018 IPR024370 PBP domain vfu_A02811 4708c69f318bb9c07f7d1c3b6f2ee895 316 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 300 4.7E-75 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 vfu_A00105 d0db0f6f321fa5bba1b214fe0a5c844a 449 ProSitePatterns PS00455 Putative AMP-binding domain signature. 131 142 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A00105 d0db0f6f321fa5bba1b214fe0a5c844a 449 Gene3D G3DSA:3.30.300.30 351 433 4.6E-14 T 12-10-2018 vfu_A00105 d0db0f6f321fa5bba1b214fe0a5c844a 449 SUPERFAMILY SSF56801 8 441 3.27E-74 T 12-10-2018 vfu_A00105 d0db0f6f321fa5bba1b214fe0a5c844a 449 Pfam PF13193 AMP-binding enzyme C-terminal domain 364 431 5.0E-7 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A00105 d0db0f6f321fa5bba1b214fe0a5c844a 449 Pfam PF00501 AMP-binding enzyme 7 355 1.0E-46 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A00105 d0db0f6f321fa5bba1b214fe0a5c844a 449 Gene3D G3DSA:3.40.50.12780 3 350 3.6E-60 T 12-10-2018 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.028 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Pfam PF01926 50S ribosome-binding GTPase 217 304 1.0E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 238 7.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 282 7.4E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:3.40.50.300 216 381 1.7E-104 T 12-10-2018 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 SUPERFAMILY SSF116878 120 453 2.22E-53 T 12-10-2018 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Pfam PF12631 MnmE helical domain 122 450 1.9E-62 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 369 1.4E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 2.4E-100 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:3.30.1360.120 1 120 1.2E-38 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 SUPERFAMILY SSF52540 70 371 8.76E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Gene3D G3DSA:1.20.120.430 121 453 1.7E-104 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 vfu_A00320 03c334840fe4d316dd8bb53895227b57 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 8.1E-35 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 vfu_A02435 94f8ba3ed97ccb1408d89f0eef2a8222 224 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 177 9.6E-27 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 SUPERFAMILY SSF52172 2 109 5.83E-27 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 39.041 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 SMART SM00448 3 126 7.8E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 Gene3D G3DSA:3.40.50.180 183 372 1.4E-64 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 SUPERFAMILY SSF52738 185 370 4.45E-63 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 Gene3D G3DSA:3.40.50.2300 2 130 3.5E-32 T 12-10-2018 vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 PIRSF PIRSF000876 1 374 2.2E-127 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 Pfam PF00072 Response regulator receiver domain 5 109 1.0E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01257 abd0af4f59c08d63d2af0dc04eee9dc6 376 Pfam PF01339 CheB methylesterase 191 368 4.0E-58 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SMART SM00491 477 606 3.2E-46 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SUPERFAMILY SSF52540 14 235 1.19E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Gene3D G3DSA:3.40.50.300 445 636 1.2E-37 T 12-10-2018 vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Pfam PF04851 Type III restriction enzyme, res subunit 19 236 2.0E-5 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Pfam PF13307 Helicase C-terminal domain 462 619 1.6E-35 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SUPERFAMILY SSF52540 42 602 8.36E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 Gene3D G3DSA:3.40.50.300 19 285 1.9E-50 T 12-10-2018 vfu_A02479 eab4ad2c44c90ec5a3d3ae5fd246f64d 642 SMART SM00487 17 312 0.0062 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 ProSitePatterns PS01087 Radical activating enzymes signature. 28 49 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 Gene3D G3DSA:3.20.20.70 98 321 1.0E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 Gene3D G3DSA:3.20.20.70 12 71 2.5E-15 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 Pfam PF04055 Radical SAM superfamily 35 247 6.6E-24 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 Pfam PF13353 4Fe-4S single cluster domain 27 195 4.9E-10 T 12-10-2018 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 SUPERFAMILY SSF102114 100 295 5.69E-12 T 12-10-2018 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 SUPERFAMILY SSF54862 15 162 1.4E-20 T 12-10-2018 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 Hamap MF_02059 Choline trimethylamine-lyase activating enzyme [cutD]. 10 324 56.266 T 12-10-2018 IPR030905 Choline TMA-lyase-activating enzyme vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 TIGRFAM TIGR04395 cutC_activ_rSAM: choline TMA-lyase-activating enzyme 12 324 1.8E-118 T 12-10-2018 IPR030905 Choline TMA-lyase-activating enzyme vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 PIRSF PIRSF000371 6 319 1.3E-92 T 12-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 vfu_A00326 5a19f6583c31be4c2ad288090214d010 324 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 17 315 3.4E-109 T 12-10-2018 vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 SUPERFAMILY SSF50249 39 128 1.53E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.1E-172 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 Pfam PF10150 Ribonuclease E/G family 124 393 3.2E-103 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 Gene3D G3DSA:2.40.50.140 31 127 9.1E-32 T 12-10-2018 vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 Gene3D G3DSA:3.40.1260.20 402 488 4.5E-7 T 12-10-2018 vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 SMART SM00316 37 122 6.5E-10 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A03097 1451ef5901b4db5fc4abf063f913002e 489 Pfam PF00575 S1 RNA binding domain 38 109 5.8E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_B00456 170eecc0aee60a16710ef228fd8284fb 664 SUPERFAMILY SSF81345 18 335 3.01E-63 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00456 170eecc0aee60a16710ef228fd8284fb 664 Pfam PF01032 FecCD transport family 34 335 2.3E-71 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B00456 170eecc0aee60a16710ef228fd8284fb 664 Pfam PF01032 FecCD transport family 367 664 2.8E-68 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B00456 170eecc0aee60a16710ef228fd8284fb 664 Gene3D G3DSA:1.10.3470.10 13 340 8.9E-77 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00456 170eecc0aee60a16710ef228fd8284fb 664 Gene3D G3DSA:1.10.3470.10 356 664 1.4E-70 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00456 170eecc0aee60a16710ef228fd8284fb 664 SUPERFAMILY SSF81345 357 664 2.88E-64 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 Gene3D G3DSA:1.10.8.100 200 266 1.3E-23 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 8.9E-76 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 2.1E-86 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 SMART SM00650 25 197 2.5E-89 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 SUPERFAMILY SSF53335 8 264 1.15E-79 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 Gene3D G3DSA:3.40.50.150 1 198 1.7E-65 T 12-10-2018 vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 vfu_A03072 2633593a863474fc4bcc6cc09fec5760 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.971 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 vfu_A00868 bd1319b3deacdacea50ffce033c3767e 202 Pfam PF01121 Dephospho-CoA kinase 3 180 2.2E-72 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 vfu_A00868 bd1319b3deacdacea50ffce033c3767e 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.54 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 vfu_A00868 bd1319b3deacdacea50ffce033c3767e 202 Gene3D G3DSA:3.40.50.300 1 201 9.7E-68 T 12-10-2018 vfu_A00868 bd1319b3deacdacea50ffce033c3767e 202 SUPERFAMILY SSF52540 1 193 2.42E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00868 bd1319b3deacdacea50ffce033c3767e 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.4E-67 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 3.8E-191 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:3.90.170.10 267 438 8.2E-67 T 12-10-2018 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:1.10.300.10 102 201 1.9E-105 T 12-10-2018 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.1E-177 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 SMART SM00788 4 431 5.2E-303 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 216.87 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 SUPERFAMILY SSF52540 3 436 6.69E-178 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 vfu_A00660 8e46f583bd7a9f40faa8ccc354a13d95 438 Gene3D G3DSA:3.40.440.10 6 249 1.9E-105 T 12-10-2018 vfu_A01626 99fabf7f9629dcb304a716b8245afb5a 263 SUPERFAMILY SSF53335 6 241 6.72E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01626 99fabf7f9629dcb304a716b8245afb5a 263 Gene3D G3DSA:3.40.50.150 9 263 2.5E-58 T 12-10-2018 vfu_A01626 99fabf7f9629dcb304a716b8245afb5a 263 Pfam PF08241 Methyltransferase domain 52 148 2.6E-12 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 vfu_A01626 99fabf7f9629dcb304a716b8245afb5a 263 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 3 259 41.183 T 12-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 SUPERFAMILY SSF53706 51 692 4.97E-173 T 12-10-2018 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 511 528 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Pfam PF00384 Molybdopterin oxidoreductase 113 569 1.3E-98 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Gene3D G3DSA:3.40.50.740 420 621 8.0E-51 T 12-10-2018 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Gene3D G3DSA:3.40.50.740 47 321 1.7E-81 T 12-10-2018 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 41 6.3E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 SMART SM00926 50 110 2.1E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 9 808 0.0 T 12-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Gene3D G3DSA:2.40.40.20 665 813 2.0E-39 T 12-10-2018 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 50 110 2.3E-16 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Gene3D G3DSA:3.40.228.10 342 414 3.8E-16 T 12-10-2018 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 Pfam PF01568 Molydopterin dinucleotide binding domain 690 801 2.8E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_B00895 aba9b808d732f6447a9b1bdd04962b7e 816 SUPERFAMILY SSF50692 636 806 7.01E-37 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 SUPERFAMILY SSF90123 25 342 1.12E-53 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 Gene3D G3DSA:3.40.50.300 350 604 1.6E-91 T 12-10-2018 vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 Pfam PF00005 ABC transporter 378 531 7.6E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 Pfam PF00664 ABC transporter transmembrane region 40 308 7.1E-20 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 Gene3D G3DSA:1.20.1560.10 6 336 8.5E-30 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 SUPERFAMILY SSF52540 350 601 1.58E-88 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01039 a9e5faaf980664a388088b93a7fdfca0 615 SMART SM00382 386 577 2.9E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 SUPERFAMILY SSF52172 1 125 6.69E-29 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 SUPERFAMILY SSF46894 135 205 1.97E-20 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 6.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 6.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 6.0E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 Gene3D G3DSA:3.40.50.12740 2 205 1.1E-57 T 12-10-2018 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 SMART SM00421 142 199 3.2E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 Pfam PF00072 Response regulator receiver domain 4 116 2.2E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 1.6E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A02456 26a4299b0af788805bc4b9e1ebceadc6 208 SMART SM00448 2 115 4.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01334 281da926e96330033081d676052cad22 238 Gene3D G3DSA:3.10.200.10 22 237 9.4E-79 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily vfu_B01334 281da926e96330033081d676052cad22 238 SMART SM01057 23 238 3.9E-92 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain vfu_B01334 281da926e96330033081d676052cad22 238 Pfam PF00194 Eukaryotic-type carbonic anhydrase 22 237 2.7E-49 T 12-10-2018 IPR001148 Alpha carbonic anhydrase domain vfu_B01334 281da926e96330033081d676052cad22 238 SUPERFAMILY SSF51069 22 235 1.7E-73 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily vfu_B01334 281da926e96330033081d676052cad22 238 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 109 125 - T 12-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 vfu_A00810 189ac48507fa45096871bbd1cad76373 177 Pfam PF01569 PAP2 superfamily 63 175 1.6E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase vfu_A00810 189ac48507fa45096871bbd1cad76373 177 Gene3D G3DSA:1.20.144.10 89 177 4.8E-19 T 12-10-2018 vfu_A00810 189ac48507fa45096871bbd1cad76373 177 SMART SM00014 61 170 7.2E-13 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase vfu_A00810 189ac48507fa45096871bbd1cad76373 177 SUPERFAMILY SSF48317 6 173 1.14E-36 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily vfu_A00122 024964cb632680e1ca9cf610e9307d30 410 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 320 399 5.2E-9 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain vfu_A00122 024964cb632680e1ca9cf610e9307d30 410 Pfam PF13440 Polysaccharide biosynthesis protein 27 318 1.9E-6 T 12-10-2018 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 12-10-2018 IPR018080 Band 7/stomatin-like, conserved site vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 SUPERFAMILY SSF117892 53 187 5.75E-42 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 Gene3D G3DSA:3.30.479.30 50 182 1.5E-43 T 12-10-2018 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 SMART SM00244 22 180 2.4E-59 T 12-10-2018 IPR001107 Band 7 domain vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 Pfam PF16200 C-terminal region of band_7 241 303 1.4E-7 T 12-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 Pfam PF01145 SPFH domain / Band 7 family 26 207 3.1E-35 T 12-10-2018 IPR001107 Band 7 domain vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 175 196 6.5E-30 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 156 174 6.5E-30 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 77 98 6.5E-30 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 132 155 6.5E-30 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A02627 d4911993c1e9c837827e6c0fe1dd870d 309 PRINTS PR00721 Stomatin signature 112 129 6.5E-30 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A02320 13a296c97fe96079bec29b0a608e941c 247 Pfam PF07670 Nucleoside recognition 86 180 1.8E-10 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_B00913 7ebe1d9f8bddeeddc8833feaaf8a007b 254 Gene3D G3DSA:1.10.3730.10 154 254 5.3E-5 T 12-10-2018 vfu_B00913 7ebe1d9f8bddeeddc8833feaaf8a007b 254 PIRSF PIRSF000193 2 254 1.3E-37 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_B00913 7ebe1d9f8bddeeddc8833feaaf8a007b 254 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 95 5.3E-14 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal vfu_B00913 7ebe1d9f8bddeeddc8833feaaf8a007b 254 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 251 2.8E-6 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_B00913 7ebe1d9f8bddeeddc8833feaaf8a007b 254 SUPERFAMILY SSF51735 4 145 4.79E-23 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00913 7ebe1d9f8bddeeddc8833feaaf8a007b 254 Gene3D G3DSA:3.40.50.720 1 153 2.8E-30 T 12-10-2018 vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 Gene3D G3DSA:1.10.10.10 4 89 1.2E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 SUPERFAMILY SSF53850 91 291 4.27E-41 T 12-10-2018 vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 Pfam PF03466 LysR substrate binding domain 90 289 6.5E-41 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 SUPERFAMILY SSF46785 4 112 4.42E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 Gene3D G3DSA:3.40.190.10 164 262 6.4E-62 T 12-10-2018 vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.6E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01149 3661d95c3a005c7145bae634c959d85e 293 Gene3D G3DSA:3.40.190.10 92 287 6.4E-62 T 12-10-2018 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 SUPERFAMILY SSF46785 3 83 6.33E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 SUPERFAMILY SSF53850 88 289 1.36E-22 T 12-10-2018 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 Gene3D G3DSA:3.40.190.10 98 284 1.3E-36 T 12-10-2018 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 Pfam PF03466 LysR substrate binding domain 87 288 5.6E-19 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 Gene3D G3DSA:3.40.190.10 158 259 1.3E-36 T 12-10-2018 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 Gene3D G3DSA:1.10.10.10 1 92 3.1E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00292 204388dedb1e4da4d66c8a8e2840dd16 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 Gene3D G3DSA:2.60.120.330 1 317 1.7E-100 T 12-10-2018 IPR027443 Isopenicillin N synthase-like vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 SUPERFAMILY SSF51197 3 311 1.1E-90 T 12-10-2018 vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 173 270 3.5E-24 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 PRINTS PR00682 Isopenicillin N synthase signature 229 255 3.9E-14 T 12-10-2018 vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 PRINTS PR00682 Isopenicillin N synthase signature 26 43 3.9E-14 T 12-10-2018 vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 PRINTS PR00682 Isopenicillin N synthase signature 193 214 3.9E-14 T 12-10-2018 vfu_A00797 cfcba0830017387f68fc0886596a8f4a 320 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 3 127 7.4E-31 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 Gene3D G3DSA:1.10.8.60 187 260 2.9E-31 T 12-10-2018 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 Gene3D G3DSA:3.40.50.300 25 186 1.2E-40 T 12-10-2018 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 SUPERFAMILY SSF46785 262 333 8.55E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.1E-116 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 6.0E-148 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 8.0E-38 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.15 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 Gene3D G3DSA:1.10.10.10 262 334 2.4E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 SMART SM00382 56 183 2.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 9.8E-34 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 vfu_A02351 0188a55a1704ef90efd77aaa8ee274eb 334 SUPERFAMILY SSF52540 25 256 1.58E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00315 f3273aef28ed8c624d3844989f9777d9 223 SUPERFAMILY SSF161098 13 203 4.71E-43 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00315 f3273aef28ed8c624d3844989f9777d9 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 4.0E-25 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A00315 f3273aef28ed8c624d3844989f9777d9 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 2.7E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00315 f3273aef28ed8c624d3844989f9777d9 223 Gene3D G3DSA:1.10.3720.10 1 222 1.8E-52 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01530 0a0df5fd139644c88b07194b372b56bc 199 SUPERFAMILY SSF53335 98 198 1.17E-11 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01530 0a0df5fd139644c88b07194b372b56bc 199 Gene3D G3DSA:1.10.10.10 3 97 8.4E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01530 0a0df5fd139644c88b07194b372b56bc 199 Gene3D G3DSA:1.20.58.1390 100 164 1.4E-41 T 12-10-2018 vfu_A01530 0a0df5fd139644c88b07194b372b56bc 199 Gene3D G3DSA:3.40.50.150 165 197 1.4E-41 T 12-10-2018 vfu_A01530 0a0df5fd139644c88b07194b372b56bc 199 SUPERFAMILY SSF46785 18 98 1.59E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00101 fea0b5b51c41fd43aba7c7da610ee526 343 Gene3D G3DSA:3.40.50.2000 2 337 6.7E-57 T 12-10-2018 vfu_A00101 fea0b5b51c41fd43aba7c7da610ee526 343 Gene3D G3DSA:3.40.50.2000 156 326 6.7E-57 T 12-10-2018 vfu_A00101 fea0b5b51c41fd43aba7c7da610ee526 343 SUPERFAMILY SSF53756 2 339 3.35E-61 T 12-10-2018 vfu_A00101 fea0b5b51c41fd43aba7c7da610ee526 343 Pfam PF00534 Glycosyl transferases group 1 169 319 1.1E-33 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_A02177 020202e59e72844a80a791526c6bc10e 490 Pfam PF03553 Na+/H+ antiporter family 223 489 7.5E-25 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 vfu_A02603 72faa14446dd49f17158d51afaf3c92c 1500 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1454 1495 5.1E-15 T 12-10-2018 IPR020011 Motility protein FimV, C-terminal vfu_A02603 72faa14446dd49f17158d51afaf3c92c 1500 Gene3D G3DSA:1.20.58.2200 1437 1496 1.3E-13 T 12-10-2018 IPR038440 FimV, C-terminal domain superfamily vfu_A02603 72faa14446dd49f17158d51afaf3c92c 1500 ProSitePatterns PS00018 EF-hand calcium-binding domain. 436 448 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site vfu_A02603 72faa14446dd49f17158d51afaf3c92c 1500 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 71 143 2.1E-27 T 12-10-2018 IPR020012 Motility protein FimV, N-terminal vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 447 603 6.4E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 SUPERFAMILY SSF103190 197 282 4.39E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 SUPERFAMILY SSF103190 28 191 1.1E-39 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 Gene3D G3DSA:3.30.450.20 62 191 2.6E-26 T 12-10-2018 vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 Gene3D G3DSA:3.30.450.20 314 450 1.4E-29 T 12-10-2018 vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 SMART SM00267 439 604 3.8E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 Pfam PF13426 PAS domain 337 438 1.4E-15 T 12-10-2018 IPR000014 PAS domain vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 Gene3D G3DSA:3.30.70.270 451 611 3.1E-43 T 12-10-2018 vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 SUPERFAMILY SSF55785 337 447 2.74E-25 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 446 1.2E-18 T 12-10-2018 IPR000014 PAS domain vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 Pfam PF00990 Diguanylate cyclase, GGDEF domain 452 599 2.3E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 SUPERFAMILY SSF55073 455 603 2.28E-38 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00328 0264f435b0ffd3dc8441e7d668a0c9d9 613 SMART SM00086 397 439 5.6E-7 T 12-10-2018 IPR001610 PAC motif vfu_A02566 0b3be0f91dd6c27cd5193247c3dc8d0c 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 4.2E-99 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 vfu_A02566 0b3be0f91dd6c27cd5193247c3dc8d0c 358 SUPERFAMILY SSF52540 96 343 6.23E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02566 0b3be0f91dd6c27cd5193247c3dc8d0c 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.501 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein vfu_A02566 0b3be0f91dd6c27cd5193247c3dc8d0c 358 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 vfu_A02566 0b3be0f91dd6c27cd5193247c3dc8d0c 358 Gene3D G3DSA:3.40.50.300 79 336 8.1E-83 T 12-10-2018 vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 Pfam PF09339 IclR helix-turn-helix domain 12 62 7.0E-13 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 Gene3D G3DSA:3.30.450.40 83 260 2.6E-62 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 Gene3D G3DSA:1.10.10.10 1 77 4.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 SUPERFAMILY SSF55781 74 255 3.92E-52 T 12-10-2018 vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 Pfam PF01614 Bacterial transcriptional regulator 126 251 8.8E-42 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 SMART SM00346 10 99 8.8E-29 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 vfu_B01246 6cb7a5397b494cf05bf52f7f8d684135 260 SUPERFAMILY SSF46785 10 80 3.57E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 SUPERFAMILY SSF46785 1 85 1.04E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 Gene3D G3DSA:3.40.190.10 165 265 4.5E-28 T 12-10-2018 vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 SUPERFAMILY SSF53850 89 291 1.19E-30 T 12-10-2018 vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 Pfam PF03466 LysR substrate binding domain 88 289 1.3E-35 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 Gene3D G3DSA:1.10.10.10 1 83 1.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 Gene3D G3DSA:3.40.190.10 91 286 4.5E-28 T 12-10-2018 vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00258 ac17a9fdb81fe25a1ba21e5e1976419b 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 SUPERFAMILY SSF51735 2 242 4.24E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 174 4.0E-4 T 12-10-2018 vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 5.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.1E-40 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 2.1E-61 T 12-10-2018 vfu_B00069 f36733f0336793d7ed889f5633f17d5e 243 Gene3D G3DSA:3.40.50.720 1 243 3.1E-81 T 12-10-2018 vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 2.1E-28 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 SUPERFAMILY SSF53901 1 251 1.3E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 SUPERFAMILY SSF53901 213 401 3.84E-62 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.5E-14 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 Gene3D G3DSA:3.40.47.10 258 401 6.8E-52 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 Gene3D G3DSA:3.40.47.10 6 257 1.9E-68 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01213 da5e6e482d6ed59a7fc8525c91af6008 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.7E-45 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.7E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 Gene3D G3DSA:3.40.50.2300 161 290 8.3E-90 T 12-10-2018 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 Gene3D G3DSA:3.40.50.2300 69 322 8.3E-90 T 12-10-2018 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 Gene3D G3DSA:1.10.260.40 3 59 1.4E-23 T 12-10-2018 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 SUPERFAMILY SSF47413 1 59 1.19E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 SUPERFAMILY SSF53822 60 331 7.66E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 SMART SM00354 1 71 1.4E-36 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 vfu_B01200 1cabb7605df6629956a3134fda3f7ba0 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.4E-42 T 12-10-2018 vfu_A00027 6844c18a9b276a614579533cbae9161a 429 Pfam PF00939 Sodium:sulfate symporter transmembrane region 1 426 2.2E-46 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_A00027 6844c18a9b276a614579533cbae9161a 429 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 1 425 1.4E-79 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_A01474 6e70d9a07b4a3f1913606a3d6e495c81 449 Gene3D G3DSA:3.30.559.30 210 440 2.7E-42 T 12-10-2018 vfu_A01474 6e70d9a07b4a3f1913606a3d6e495c81 449 Gene3D G3DSA:3.30.559.10 13 209 3.1E-42 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 vfu_A01474 6e70d9a07b4a3f1913606a3d6e495c81 449 SUPERFAMILY SSF52777 13 188 3.56E-28 T 12-10-2018 vfu_A01474 6e70d9a07b4a3f1913606a3d6e495c81 449 SUPERFAMILY SSF52777 194 432 8.56E-28 T 12-10-2018 vfu_A01474 6e70d9a07b4a3f1913606a3d6e495c81 449 Pfam PF00668 Condensation domain 11 432 5.0E-42 T 12-10-2018 IPR001242 Condensation domain vfu_A02392 3e5fd8aed265dfaee43fc1675cb213f3 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.0E-108 T 12-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 vfu_A02392 3e5fd8aed265dfaee43fc1675cb213f3 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02392 3e5fd8aed265dfaee43fc1675cb213f3 228 Gene3D G3DSA:3.40.50.300 1 228 4.6E-63 T 12-10-2018 vfu_A02392 3e5fd8aed265dfaee43fc1675cb213f3 228 Pfam PF00005 ABC transporter 24 172 7.1E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02392 3e5fd8aed265dfaee43fc1675cb213f3 228 SMART SM00382 33 221 2.8E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02392 3e5fd8aed265dfaee43fc1675cb213f3 228 SUPERFAMILY SSF52540 4 226 5.58E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02568 9919cdc6f97496866b330d9891881020 376 Gene3D G3DSA:1.10.730.10 85 211 1.2E-62 T 12-10-2018 vfu_A02568 9919cdc6f97496866b330d9891881020 376 Gene3D G3DSA:3.40.50.620 1 84 1.2E-62 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02568 9919cdc6f97496866b330d9891881020 376 Pfam PF09334 tRNA synthetases class I (M) 1 89 4.5E-25 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02568 9919cdc6f97496866b330d9891881020 376 SUPERFAMILY SSF47323 79 289 7.85E-45 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A02568 9919cdc6f97496866b330d9891881020 376 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 245 375 7.0E-47 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 vfu_A02568 9919cdc6f97496866b330d9891881020 376 Gene3D G3DSA:2.40.50.140 265 376 2.5E-36 T 12-10-2018 vfu_A02568 9919cdc6f97496866b330d9891881020 376 Pfam PF01588 Putative tRNA binding domain 281 373 2.5E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 vfu_A02568 9919cdc6f97496866b330d9891881020 376 SUPERFAMILY SSF52374 2 80 5.91E-19 T 12-10-2018 vfu_A02568 9919cdc6f97496866b330d9891881020 376 SUPERFAMILY SSF50249 274 375 4.9E-35 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 SMART SM00304 295 349 2.3E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 7.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 7.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 7.4E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 Gene3D G3DSA:1.10.287.950 295 611 4.5E-63 T 12-10-2018 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 SMART SM00283 364 625 4.0E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 408 591 3.3E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02376 0f4d772d145b8e00b2422dc8121d8995 626 SUPERFAMILY SSF58104 315 625 1.92E-61 T 12-10-2018 vfu_A00016 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Gene3D G3DSA:1.10.20.140 115 186 3.4E-107 T 12-10-2018 vfu_A00016 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.113 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 vfu_A00016 f4c0bd92e86d8e8f68f1e94a239a87aa 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 3.0E-116 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 vfu_A00016 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Gene3D G3DSA:3.40.50.300 12 292 3.4E-107 T 12-10-2018 vfu_A00016 f4c0bd92e86d8e8f68f1e94a239a87aa 310 Pfam PF01715 IPP transferase 42 287 1.9E-85 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 vfu_A00016 f4c0bd92e86d8e8f68f1e94a239a87aa 310 SUPERFAMILY SSF52540 10 152 5.6E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 PIRSF PIRSF000379 8 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 765 0.0 T 12-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 6.0E-193 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 Pfam PF01228 Glycine radical 630 746 1.0E-41 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 SUPERFAMILY SSF51998 7 763 9.77E-276 T 12-10-2018 vfu_A02584 37f44bd7344ccd0e19f0e6e4daff7f1e 765 Gene3D G3DSA:3.20.70.20 5 765 0.0 T 12-10-2018 vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 Pfam PF03472 Autoinducer binding domain 20 151 3.7E-31 T 12-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 SMART SM00421 173 230 4.0E-21 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 SUPERFAMILY SSF46894 167 237 9.18E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 230 1.2E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 Gene3D G3DSA:1.10.10.10 170 237 7.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 SUPERFAMILY SSF75516 3 163 5.62E-36 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 Gene3D G3DSA:3.30.450.80 4 167 3.1E-37 T 12-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 1.8E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 1.8E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B01268 73fcce862820ac0124fe688f1eed9b93 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 1.8E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 Gene3D G3DSA:3.90.180.10 8 340 2.2E-135 T 12-10-2018 vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 SMART SM00829 8 341 2.9E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 SUPERFAMILY SSF50129 10 170 4.57E-50 T 12-10-2018 IPR011032 GroES-like superfamily vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 143 1.5E-29 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 Gene3D G3DSA:3.40.50.720 166 320 2.2E-135 T 12-10-2018 vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 SUPERFAMILY SSF51735 148 311 2.55E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 Pfam PF00107 Zinc-binding dehydrogenase 185 307 8.8E-20 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 vfu_B00262 f91f7b529cd6569bc32ce8f9fabe2388 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 Gene3D G3DSA:1.20.1330.10 44 327 8.1E-77 T 12-10-2018 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 Gene3D G3DSA:3.30.70.2120 174 275 8.1E-77 T 12-10-2018 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 Pfam PF07196 Flagellin hook IN motif 194 249 2.0E-12 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 Gene3D G3DSA:1.10.8.410 328 376 9.8E-21 T 12-10-2018 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.2E-41 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 8.1E-26 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01180 d85c173d07b62575147278a7e4b04de6 377 SUPERFAMILY SSF64518 1 376 7.98E-95 T 12-10-2018 vfu_A01078 4deeeafb0d3f4bd8926788f722dfcdf7 169 PIRSF PIRSF002094 1 169 2.8E-39 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 vfu_A01078 4deeeafb0d3f4bd8926788f722dfcdf7 169 Gene3D G3DSA:3.30.910.20 25 169 1.3E-34 T 12-10-2018 IPR024930 Skp domain superfamily vfu_A01078 4deeeafb0d3f4bd8926788f722dfcdf7 169 SUPERFAMILY SSF111384 26 168 1.83E-30 T 12-10-2018 vfu_A01078 4deeeafb0d3f4bd8926788f722dfcdf7 169 SMART SM00935 15 169 1.5E-40 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 vfu_A01078 4deeeafb0d3f4bd8926788f722dfcdf7 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 167 1.1E-23 T 12-10-2018 IPR005632 Chaperone protein Skp GO:0051082 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 SUPERFAMILY SSF53335 5 309 7.96E-64 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01942 b0be37eba36e0de46949212239b216e6 474 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 307 3.4E-49 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 474 64.088 T 12-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 187 198 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.5E-28 T 12-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 Gene3D G3DSA:3.40.50.150 2 309 8.6E-97 T 12-10-2018 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 5.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A01942 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 121 131 5.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A01942 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 292 309 5.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A01942 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 188 200 5.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A01942 b0be37eba36e0de46949212239b216e6 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 238 254 5.1E-28 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase vfu_A01942 b0be37eba36e0de46949212239b216e6 474 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 309 1.1E-99 T 12-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 vfu_A01942 b0be37eba36e0de46949212239b216e6 474 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 420 469 2.0E-12 T 12-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain vfu_A01942 b0be37eba36e0de46949212239b216e6 474 Gene3D G3DSA:2.30.130.90 310 474 9.9E-67 T 12-10-2018 vfu_B00469 01b74a077ff3d7736031d5355c94feab 313 Gene3D G3DSA:1.10.10.10 1 53 5.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00469 01b74a077ff3d7736031d5355c94feab 313 Gene3D G3DSA:3.40.50.1360 54 311 1.9E-55 T 12-10-2018 vfu_B00469 01b74a077ff3d7736031d5355c94feab 313 SUPERFAMILY SSF100950 59 311 9.21E-54 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B00469 01b74a077ff3d7736031d5355c94feab 313 Pfam PF04198 Putative sugar-binding domain 59 311 2.8E-66 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.90.55.10 82 617 2.8E-213 T 12-10-2018 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 SUPERFAMILY SSF53706 44 667 1.31E-160 T 12-10-2018 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.40.228.10 178 643 2.8E-213 T 12-10-2018 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:3.40.50.740 86 566 2.8E-213 T 12-10-2018 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 12-10-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 SUPERFAMILY SSF50692 670 812 1.06E-42 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 Gene3D G3DSA:2.40.40.20 651 809 1.3E-48 T 12-10-2018 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 2.6E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 787 2.1E-25 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_A02000 6da722ab0974b935c96f0dc87e271563 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 8.0E-99 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 SUPERFAMILY SSF51905 1 310 1.38E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 3.3E-39 T 12-10-2018 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.3E-39 T 12-10-2018 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.3E-39 T 12-10-2018 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 3.3E-39 T 12-10-2018 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 3.3E-39 T 12-10-2018 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 Gene3D G3DSA:3.50.50.60 115 241 2.0E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 291 310 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 235 256 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 3.3E-80 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 310 1.1E-119 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 Gene3D G3DSA:3.50.50.60 7 309 2.0E-122 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 vfu_B00905 2dd7e3670ffde94d131e759758123a28 323 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 297 9.4E-52 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A00013 870791d51168aa9d443034a206c9fabb 397 SMART SM00244 87 247 1.1E-50 T 12-10-2018 IPR001107 Band 7 domain vfu_A00013 870791d51168aa9d443034a206c9fabb 397 SUPERFAMILY SSF117892 120 252 1.96E-22 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily vfu_A00013 870791d51168aa9d443034a206c9fabb 397 Pfam PF01145 SPFH domain / Band 7 family 91 262 4.6E-30 T 12-10-2018 IPR001107 Band 7 domain vfu_A00013 870791d51168aa9d443034a206c9fabb 397 TIGRFAM TIGR01933 hflK: HflK protein 89 349 1.6E-123 T 12-10-2018 IPR010201 HflK GO:0016021 vfu_A00013 870791d51168aa9d443034a206c9fabb 397 PRINTS PR00721 Stomatin signature 197 220 8.1E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A00013 870791d51168aa9d443034a206c9fabb 397 PRINTS PR00721 Stomatin signature 141 162 8.1E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A00013 870791d51168aa9d443034a206c9fabb 397 PRINTS PR00721 Stomatin signature 94 116 8.1E-7 T 12-10-2018 IPR001972 Stomatin family GO:0016020 vfu_A00013 870791d51168aa9d443034a206c9fabb 397 Pfam PF12221 Bacterial membrane protein N terminal 1 56 5.9E-15 T 12-10-2018 IPR020980 Menbrane protein HflK, N-terminal vfu_A00013 870791d51168aa9d443034a206c9fabb 397 Gene3D G3DSA:3.30.479.30 117 249 2.3E-21 T 12-10-2018 vfu_A01435 ad3fc32e6ebd1f7d148c63fb7a3c6f94 437 SUPERFAMILY SSF56954 14 417 2.88E-49 T 12-10-2018 vfu_A01435 ad3fc32e6ebd1f7d148c63fb7a3c6f94 437 Pfam PF02321 Outer membrane efflux protein 240 417 3.2E-19 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01435 ad3fc32e6ebd1f7d148c63fb7a3c6f94 437 Pfam PF02321 Outer membrane efflux protein 20 202 3.4E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01435 ad3fc32e6ebd1f7d148c63fb7a3c6f94 437 Gene3D G3DSA:1.20.1600.10 16 418 1.1E-40 T 12-10-2018 vfu_B00237 1705378da74eb24c75093a9ff1a7231e 147 Gene3D G3DSA:2.30.30.40 79 147 9.1E-26 T 12-10-2018 vfu_B00237 1705378da74eb24c75093a9ff1a7231e 147 Pfam PF03831 PhnA domain 83 146 5.7E-25 T 12-10-2018 IPR013988 PhnA protein, C-terminal vfu_B00237 1705378da74eb24c75093a9ff1a7231e 147 SUPERFAMILY SSF82057 76 146 2.84E-22 T 12-10-2018 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 3 281 56.049 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PIRSF PIRSF000166 2 304 5.3E-126 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 238 265 1.9E-68 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 129 151 1.9E-68 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 266 292 1.9E-68 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 31 47 1.9E-68 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 94 118 1.9E-68 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 PRINTS PR00073 Coprogen oxidase signature 166 195 1.9E-68 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 SUPERFAMILY SSF102886 5 304 1.7E-133 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 Pfam PF01218 Coproporphyrinogen III oxidase 9 304 2.6E-129 T 12-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 Gene3D G3DSA:3.40.1500.10 1 304 5.0E-134 T 12-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_A00264 efeac268cfe1deaa3ae8cc4ceb1cafc3 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 170 194 - T 12-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 vfu_B00855 5c42de151de8bdb3ceae839bf0a4c3f7 437 Pfam PF00561 alpha/beta hydrolase fold 52 307 6.9E-23 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_B00855 5c42de151de8bdb3ceae839bf0a4c3f7 437 SUPERFAMILY SSF53474 46 421 6.73E-32 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00855 5c42de151de8bdb3ceae839bf0a4c3f7 437 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 84 95 1.9E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 vfu_B00855 5c42de151de8bdb3ceae839bf0a4c3f7 437 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 54 62 1.9E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 vfu_B00855 5c42de151de8bdb3ceae839bf0a4c3f7 437 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 141 155 1.9E-8 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 SMART SM00267 283 452 4.2E-42 T 12-10-2018 IPR000160 GGDEF domain vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 Gene3D G3DSA:3.30.70.270 289 453 3.6E-50 T 12-10-2018 vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 SUPERFAMILY SSF55073 299 450 6.12E-44 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 451 4.5E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 Pfam PF03924 CHASE domain 109 220 2.2E-14 T 12-10-2018 IPR006189 CHASE domain vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 SMART SM01079 47 223 1.9E-34 T 12-10-2018 IPR006189 CHASE domain vfu_B00767 49943c2cb242012622a7f55cfaabd6bb 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 450 1.7E-44 T 12-10-2018 IPR000160 GGDEF domain vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.236 T 12-10-2018 IPR026593 Protein translocase subunit SecY vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PIRSF PIRSF004557 10 442 2.4E-122 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 SUPERFAMILY SSF103491 15 425 3.4E-131 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Gene3D G3DSA:1.10.3370.10 10 430 1.7E-160 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 5.9E-96 T 12-10-2018 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 8.7E-135 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A00687 4f4ef73eb7bf273cefe53cedf6dc9fb9 444 Pfam PF00344 SecY translocase 76 418 1.5E-118 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 vfu_A01877 deb6ed9490fbab739d605143b0733afc 768 SUPERFAMILY SSF52540 443 621 1.91E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01877 deb6ed9490fbab739d605143b0733afc 768 Gene3D G3DSA:3.40.50.300 440 583 7.2E-9 T 12-10-2018 vfu_A02851 9df032eb522145a9ccc0b3f337585ff9 385 Pfam PF13487 HD domain 244 313 1.9E-14 T 12-10-2018 vfu_A02851 9df032eb522145a9ccc0b3f337585ff9 385 SUPERFAMILY SSF55781 24 142 6.38E-14 T 12-10-2018 vfu_A02851 9df032eb522145a9ccc0b3f337585ff9 385 Gene3D G3DSA:3.30.450.40 17 153 3.3E-11 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_A02851 9df032eb522145a9ccc0b3f337585ff9 385 Gene3D G3DSA:1.10.3210.10 168 375 2.4E-47 T 12-10-2018 vfu_A02851 9df032eb522145a9ccc0b3f337585ff9 385 SUPERFAMILY SSF109604 189 358 2.54E-22 T 12-10-2018 vfu_B00072 38d37c65146c9cfb413252cb9f8bceaa 169 SUPERFAMILY SSF55826 10 158 4.97E-36 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_B00072 38d37c65146c9cfb413252cb9f8bceaa 169 Pfam PF04073 Aminoacyl-tRNA editing domain 31 149 3.0E-30 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 vfu_B00072 38d37c65146c9cfb413252cb9f8bceaa 169 Gene3D G3DSA:3.90.960.10 4 166 2.9E-42 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 Gene3D G3DSA:2.40.50.460 452 579 1.2E-8 T 12-10-2018 vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 Pfam PF02272 DHHA1 domain 319 451 4.9E-26 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 Gene3D G3DSA:3.90.1640.30 44 323 8.9E-89 T 12-10-2018 vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 SUPERFAMILY SSF64182 45 464 8.89E-119 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 Gene3D G3DSA:3.10.310.30 325 451 1.8E-31 T 12-10-2018 vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 575 7.1E-157 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 vfu_A00878 59e9c2ce86b7f3943fe2de14ac21d224 579 Pfam PF01368 DHH family 71 204 5.1E-8 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 vfu_A01619 ef10dc036a6f584a06acb51b44c4fb49 107 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 12-10-2018 IPR001876 Zinc finger, RanBP2-type vfu_A01619 ef10dc036a6f584a06acb51b44c4fb49 107 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 3.1E-10 T 12-10-2018 IPR018551 Domain of unknown function DUF2007 vfu_A01333 0996f3d3a5c8cf819c9d1420153ac8b5 181 SUPERFAMILY SSF144091 4 173 2.49E-25 T 12-10-2018 vfu_A01333 0996f3d3a5c8cf819c9d1420153ac8b5 181 Gene3D G3DSA:1.20.1540.10 1 176 3.6E-16 T 12-10-2018 IPR035952 Rhomboid-like superfamily vfu_A01333 0996f3d3a5c8cf819c9d1420153ac8b5 181 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 26 171 5.2E-50 T 12-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria vfu_A01333 0996f3d3a5c8cf819c9d1420153ac8b5 181 Pfam PF01694 Rhomboid family 33 177 4.4E-13 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 vfu_A00090 068a670e94aea4213afac9f61473c320 190 SUPERFAMILY SSF52141 2 188 2.52E-57 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A00090 068a670e94aea4213afac9f61473c320 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 9.5E-26 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A00090 068a670e94aea4213afac9f61473c320 190 SMART SM00987 26 182 2.6E-29 T 12-10-2018 vfu_A00090 068a670e94aea4213afac9f61473c320 190 Gene3D G3DSA:3.40.470.10 1 190 2.0E-70 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_A00090 068a670e94aea4213afac9f61473c320 190 SMART SM00986 26 182 2.6E-29 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 Pfam PF00924 Mechanosensitive ion channel 138 340 7.4E-58 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 12-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 Gene3D G3DSA:3.30.70.100 248 346 3.6E-16 T 12-10-2018 vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 SUPERFAMILY SSF82861 97 179 4.45E-14 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 SUPERFAMILY SSF82689 249 351 3.4E-20 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 SUPERFAMILY SSF50182 180 247 3.27E-18 T 12-10-2018 IPR010920 LSM domain superfamily vfu_B00807 ffa9af3635dc6204a3db853dd847e387 366 Gene3D G3DSA:2.30.30.60 196 246 3.7E-10 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily vfu_A00033 947f68ff655d79f10cc27c4ca73e4817 211 Gene3D G3DSA:1.10.357.10 1 210 1.6E-64 T 12-10-2018 vfu_A00033 947f68ff655d79f10cc27c4ca73e4817 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00033 947f68ff655d79f10cc27c4ca73e4817 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00033 947f68ff655d79f10cc27c4ca73e4817 211 SUPERFAMILY SSF46689 2 72 4.47E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00033 947f68ff655d79f10cc27c4ca73e4817 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.8E-42 T 12-10-2018 IPR025722 Bacterial transcriptional repressor TetR vfu_A00033 947f68ff655d79f10cc27c4ca73e4817 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 8.9E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01245 48d06565de33c83273a3f27d24c82592 253 SUPERFAMILY SSF51735 9 252 1.38E-76 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01245 48d06565de33c83273a3f27d24c82592 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 4.6E-60 T 12-10-2018 vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.4E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 Gene3D G3DSA:3.40.50.720 1 253 3.3E-81 T 12-10-2018 vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01245 48d06565de33c83273a3f27d24c82592 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 7.2E-132 T 12-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 vfu_B01245 48d06565de33c83273a3f27d24c82592 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B00380 d6fe22571f337b9d9db318b7ba8186b2 191 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 9 177 1.5E-14 T 12-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 vfu_B00380 d6fe22571f337b9d9db318b7ba8186b2 191 Pfam PF06890 Bacteriophage Mu Gp45 protein 22 174 1.3E-26 T 12-10-2018 IPR014462 Phage-associated protein Gp45 vfu_B00380 d6fe22571f337b9d9db318b7ba8186b2 191 PIRSF PIRSF012337 2 191 3.0E-28 T 12-10-2018 IPR014462 Phage-associated protein Gp45 vfu_A02397 0ab61ffde14f5cdb4924862da8b6c5bf 179 Gene3D G3DSA:3.40.630.30 1 178 9.3E-47 T 12-10-2018 vfu_A02397 0ab61ffde14f5cdb4924862da8b6c5bf 179 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 1.7E-22 T 12-10-2018 IPR000182 GNAT domain vfu_A02397 0ab61ffde14f5cdb4924862da8b6c5bf 179 SUPERFAMILY SSF55729 3 177 1.34E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A02016 bec1ee893ee54823a0a742f0d8df42e5 171 Pfam PF07291 Methylamine utilisation protein MauE 2 136 3.7E-11 T 12-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 vfu_A01755 868ab7071eb1d1002f84b843b11500d8 362 Gene3D G3DSA:3.40.190.10 157 328 4.6E-118 T 12-10-2018 vfu_A01755 868ab7071eb1d1002f84b843b11500d8 362 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 327 1.2E-71 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_A01755 868ab7071eb1d1002f84b843b11500d8 362 PIRSF PIRSF039026 4 362 1.6E-142 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like vfu_A01755 868ab7071eb1d1002f84b843b11500d8 362 Gene3D G3DSA:3.40.190.170 39 349 4.6E-118 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_B01034 3eb7968bb643560ef89f5710298a4cb1 278 SUPERFAMILY SSF52768 41 254 1.11E-21 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily vfu_B01034 3eb7968bb643560ef89f5710298a4cb1 278 Pfam PF00491 Arginase family 60 256 7.1E-7 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B01034 3eb7968bb643560ef89f5710298a4cb1 278 Gene3D G3DSA:3.40.800.10 34 276 3.2E-12 T 12-10-2018 vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 SUPERFAMILY SSF50685 83 167 1.71E-10 T 12-10-2018 IPR036908 RlpA-like domain superfamily vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 Gene3D G3DSA:2.40.40.10 78 172 1.3E-39 T 12-10-2018 IPR036908 RlpA-like domain superfamily vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 20 171 26.136 T 12-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 Pfam PF05036 Sporulation related domain 187 255 1.9E-6 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 SUPERFAMILY SSF110997 186 258 1.02E-12 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 81 179 1.1E-46 T 12-10-2018 IPR012997 Rare lipoprotein A vfu_A02653 e273bef3ff5226479e43feaf9cc8140a 262 Pfam PF03330 Lytic transglycolase 79 168 3.9E-28 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF11852 Domain of unknown function (DUF3372) 1023 1190 3.9E-48 T 12-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:2.60.40.10 406 513 1.5E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:2.60.40.1130 287 404 3.8E-11 T 12-10-2018 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:2.60.40.1180 1121 1194 7.8E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF51011 1088 1191 1.08E-25 T 12-10-2018 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF03714 Bacterial pullanase-associated domain 172 275 1.3E-11 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF03714 Bacterial pullanase-associated domain 42 158 4.8E-13 T 12-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF51445 511 1086 8.99E-132 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 415 499 1.3E-13 T 12-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:2.60.40.1110 27 159 3.9E-23 T 12-10-2018 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF49452 166 275 3.27E-28 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF49452 14 158 2.65E-26 T 12-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF81296 279 405 2.52E-20 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 SUPERFAMILY SSF81296 415 518 1.42E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 Gene3D G3DSA:2.60.40.1110 162 274 5.8E-23 T 12-10-2018 vfu_A00553 a18a8816f2ff35f2ab8f86874d687a37 1194 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 288 1191 0.0 T 12-10-2018 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 vfu_B00544 b1f056703eccc1227242abbc75d7a969 286 SUPERFAMILY SSF53613 17 279 2.81E-82 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00544 b1f056703eccc1227242abbc75d7a969 286 Pfam PF08543 Phosphomethylpyrimidine kinase 28 276 1.4E-93 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 vfu_B00544 b1f056703eccc1227242abbc75d7a969 286 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 21 278 1.1E-99 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_B00544 b1f056703eccc1227242abbc75d7a969 286 Gene3D G3DSA:3.40.1190.20 2 285 8.0E-103 T 12-10-2018 IPR029056 Ribokinase-like vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 PIRSF PIRSF000676 1 316 4.4E-79 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 Hamap MF_00384 Homoserine kinase [thrB]. 5 314 28.955 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 Gene3D G3DSA:3.30.70.890 174 304 9.7E-42 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 SUPERFAMILY SSF54211 3 191 2.2E-33 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 SUPERFAMILY SSF55060 178 294 3.96E-32 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 2.0E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 4.0E-107 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 181 198 9.3E-31 T 12-10-2018 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 260 275 9.3E-31 T 12-10-2018 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 10 25 9.3E-31 T 12-10-2018 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 143 156 9.3E-31 T 12-10-2018 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 PRINTS PR00958 Homoserine kinase signature 103 118 9.3E-31 T 12-10-2018 vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 Pfam PF08544 GHMP kinases C terminal 218 292 1.9E-9 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain vfu_A02896 93b8705ecf38befd877cd0adb4fbde92 318 Gene3D G3DSA:3.30.230.10 2 173 1.4E-45 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_B00687 5773c5bea9a39c1c7e7d701351d28869 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 5.9E-71 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 vfu_B00687 5773c5bea9a39c1c7e7d701351d28869 402 Pfam PF07670 Nucleoside recognition 90 185 2.7E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_B00687 5773c5bea9a39c1c7e7d701351d28869 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.6E-24 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 vfu_B00687 5773c5bea9a39c1c7e7d701351d28869 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.1E-138 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 vfu_A01848 3cd1549877c42c5baba7ea9e5a5e36fe 455 PIRSF PIRSF037714 1 450 2.8E-155 T 12-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein vfu_A01848 3cd1549877c42c5baba7ea9e5a5e36fe 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 308 427 2.0E-30 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 335 364 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 258 285 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 210 3.0E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 SUPERFAMILY SSF58104 99 373 3.66E-46 T 12-10-2018 vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 213 363 4.1E-33 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 Pfam PF13682 Chemoreceptor zinc-binding domain 377 445 2.3E-9 T 12-10-2018 IPR025991 Chemoreceptor zinc-binding domain vfu_B01408 381c78c9e7e1eb7ff8c2429ae00d422d 491 SMART SM00283 153 395 1.2E-21 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A02679 c88fda2501f762ff6e3c5e8ffb566054 181 Gene3D G3DSA:3.40.1580.20 1 181 8.9E-69 T 12-10-2018 IPR038228 Syd superfamily vfu_A02679 c88fda2501f762ff6e3c5e8ffb566054 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 2.4E-69 T 12-10-2018 IPR009948 Syd GO:0009898 vfu_A02679 c88fda2501f762ff6e3c5e8ffb566054 181 Hamap MF_01104 Protein Syd [syd]. 3 181 37.286 T 12-10-2018 IPR009948 Syd GO:0009898 vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 SUPERFAMILY SSF50249 6 76 1.1E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 Pfam PF02565 Recombination protein O C terminal 86 226 1.2E-24 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 Pfam PF11967 Recombination protein O N terminal 5 77 7.1E-24 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 Gene3D G3DSA:2.40.50.140 2 79 6.2E-34 T 12-10-2018 vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 23.25 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.5E-43 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 Gene3D G3DSA:1.20.1440.120 80 239 1.6E-53 T 12-10-2018 vfu_A00838 41bdfff24eac32edad9ae92c5ea43e91 241 SUPERFAMILY SSF57863 86 165 1.96E-12 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger vfu_A01600 de58ca1fa89cdbebe1a3735b6089fdb4 742 Gene3D G3DSA:3.40.718.10 414 651 3.3E-9 T 12-10-2018 vfu_A01600 de58ca1fa89cdbebe1a3735b6089fdb4 742 PIRSF PIRSF009407 1 742 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 vfu_A01600 de58ca1fa89cdbebe1a3735b6089fdb4 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 vfu_A01600 de58ca1fa89cdbebe1a3735b6089fdb4 742 SUPERFAMILY SSF53659 5 740 0.0 T 12-10-2018 vfu_A01600 de58ca1fa89cdbebe1a3735b6089fdb4 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 12-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 34.729 T 12-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 Gene3D G3DSA:1.10.150.240 19 92 3.9E-63 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 1.2E-37 T 12-10-2018 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 192 1.1E-11 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 Gene3D G3DSA:3.40.50.1000 7 214 3.9E-63 T 12-10-2018 IPR023214 HAD superfamily vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 SUPERFAMILY SSF56784 3 222 8.53E-59 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 221 4.3E-58 T 12-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 1.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.7E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 85 191 4.0E-14 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 vfu_A00639 c39d8ef6a198b151c777163e1afef24c 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 187 1.5E-9 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A02421 02483524fd09a983dc14f37b8a6018cd 94 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 20.753 T 12-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 vfu_A02421 02483524fd09a983dc14f37b8a6018cd 94 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 1.5E-19 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 vfu_A02734 6d63d44e438c822d439804d2133bcb9a 119 SUPERFAMILY SSF54285 6 82 6.54E-26 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp vfu_A02734 6d63d44e438c822d439804d2133bcb9a 119 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 25.253 T 12-10-2018 IPR005346 RnfH protein vfu_A02734 6d63d44e438c822d439804d2133bcb9a 119 Pfam PF03658 RnfH family Ubiquitin 8 90 8.0E-34 T 12-10-2018 IPR005346 RnfH protein vfu_A02734 6d63d44e438c822d439804d2133bcb9a 119 Gene3D G3DSA:3.10.20.280 2 92 1.3E-33 T 12-10-2018 IPR037021 RnfH superfamily vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 Pfam PF14622 Ribonuclease-III-like 2 117 2.0E-32 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 2 199 1.3E-69 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 SMART SM00358 132 200 4.2E-21 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 ProSitePatterns PS00517 Ribonuclease III family signature. 14 22 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 SUPERFAMILY SSF69065 2 135 2.96E-44 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 SUPERFAMILY SSF54768 85 199 3.46E-28 T 12-10-2018 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 Gene3D G3DSA:3.30.160.20 130 202 3.1E-19 T 12-10-2018 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 Pfam PF00035 Double-stranded RNA binding motif 132 199 2.7E-14 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 Gene3D G3DSA:1.10.1520.10 1 124 2.1E-37 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 SMART SM00535 1 125 9.0E-51 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 vfu_A00836 5e7a62bda94f8f4903279d862c99aab9 202 Hamap MF_00104 Ribonuclease 3 [rnc]. 1 196 24.692 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 vfu_B01102 87f45658af23eb6728d9dfec2cacbb0e 199 SUPERFAMILY SSF110111 57 178 5.89E-47 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01102 87f45658af23eb6728d9dfec2cacbb0e 199 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 175 5.4E-50 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01102 87f45658af23eb6728d9dfec2cacbb0e 199 PIRSF PIRSF005413 1 192 1.9E-69 T 12-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01102 87f45658af23eb6728d9dfec2cacbb0e 199 Gene3D G3DSA:2.60.370.10 57 192 1.9E-43 T 12-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69279 200 373 1.07E-43 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 Gene3D G3DSA:3.30.1920.30 233 296 1.7E-86 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 Pfam PF05954 Phage late control gene D protein (GPD) 40 339 6.6E-78 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 Gene3D G3DSA:2.30.110.50 40 341 1.7E-86 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69255 376 461 5.49E-32 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 Gene3D G3DSA:3.55.50.10 109 200 1.7E-86 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 39 513 1.6E-131 T 12-10-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 39 531 6.3E-183 T 12-10-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 Gene3D G3DSA:2.40.50.230 365 466 1.5E-39 T 12-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69349 452 633 1.02E-45 T 12-10-2018 vfu_A01957 7a4985fd6ba0206a3e6ef811a636ec2b 688 SUPERFAMILY SSF69279 39 195 9.07E-49 T 12-10-2018 vfu_A01516 f837093224490ad53bf397e71a64550d 204 Pfam PF11659 Protein of unknown function (DUF3261) 49 193 1.0E-34 T 12-10-2018 IPR021675 Protein of unknown function DUF3261 vfu_A00715 ad0acbac6b5bbfb941a4852abf056c12 549 Pfam PF01103 Surface antigen 369 545 9.2E-28 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 vfu_A00715 ad0acbac6b5bbfb941a4852abf056c12 549 Gene3D G3DSA:3.10.20.310 76 162 1.4E-28 T 12-10-2018 vfu_A00715 ad0acbac6b5bbfb941a4852abf056c12 549 Gene3D G3DSA:3.10.20.310 163 239 1.3E-20 T 12-10-2018 vfu_A00715 ad0acbac6b5bbfb941a4852abf056c12 549 Gene3D G3DSA:3.10.20.310 1 74 1.4E-22 T 12-10-2018 vfu_A00715 ad0acbac6b5bbfb941a4852abf056c12 549 Gene3D G3DSA:2.40.160.50 240 549 3.0E-97 T 12-10-2018 vfu_A00715 ad0acbac6b5bbfb941a4852abf056c12 549 Pfam PF17243 POTRA domain TamA domain 1 2 73 2.4E-20 T 12-10-2018 IPR035243 TamA, POTRA domain 1 vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 SUPERFAMILY SSF46689 167 216 2.02E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 SUPERFAMILY SSF46689 219 263 2.96E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 Pfam PF12833 Helix-turn-helix domain 188 263 6.8E-21 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 SUPERFAMILY SSF51215 23 137 5.49E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 Gene3D G3DSA:1.10.10.60 166 266 4.8E-26 T 12-10-2018 vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 Pfam PF02311 AraC-like ligand binding domain 13 142 1.5E-21 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_A00221 a8e927952d81b22f06ab1ef884dc8329 266 SMART SM00342 182 264 2.0E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01872 31442d00fe650b2b4a1589f9358ae859 271 SUPERFAMILY SSF53850 29 257 5.12E-30 T 12-10-2018 vfu_A01872 31442d00fe650b2b4a1589f9358ae859 271 Pfam PF12849 PBP superfamily domain 21 249 5.1E-30 T 12-10-2018 IPR024370 PBP domain vfu_A01872 31442d00fe650b2b4a1589f9358ae859 271 Gene3D G3DSA:3.40.190.10 106 218 1.6E-97 T 12-10-2018 vfu_A01872 31442d00fe650b2b4a1589f9358ae859 271 Gene3D G3DSA:3.40.190.10 31 255 1.6E-97 T 12-10-2018 vfu_B01382 ab8e24b3a49a500e106aa45e2da44f44 165 Gene3D G3DSA:3.40.50.1110 1 165 2.1E-58 T 12-10-2018 IPR036514 SGNH hydrolase superfamily vfu_B01382 ab8e24b3a49a500e106aa45e2da44f44 165 SUPERFAMILY SSF52266 3 164 3.66E-43 T 12-10-2018 vfu_B01382 ab8e24b3a49a500e106aa45e2da44f44 165 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 148 4.1E-19 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain vfu_A00534 803404506b22843c45d5303b31e52fdf 173 Pfam PF01202 Shikimate kinase 12 166 5.0E-14 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 vfu_A00534 803404506b22843c45d5303b31e52fdf 173 Gene3D G3DSA:3.40.50.300 2 169 1.5E-68 T 12-10-2018 vfu_A00534 803404506b22843c45d5303b31e52fdf 173 SUPERFAMILY SSF52540 3 167 1.07E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00534 803404506b22843c45d5303b31e52fdf 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 165 6.6E-68 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 SUPERFAMILY SSF55347 128 349 2.71E-77 T 12-10-2018 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 256 270 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 PIRSF PIRSF000148 1 366 5.1E-63 T 12-10-2018 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 SMART SM00859 1 116 1.6E-15 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 361 1.3E-186 T 12-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 1 115 1.0E-19 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 SUPERFAMILY SSF51735 1 141 2.73E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 348 4.6E-57 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 Gene3D G3DSA:3.30.360.10 129 345 8.4E-146 T 12-10-2018 vfu_A01293 8ceb3e4af318f96fe2bfbb16b25ed0bc 366 Gene3D G3DSA:3.40.50.720 1 351 8.4E-146 T 12-10-2018 vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 SUPERFAMILY SSF51735 3 334 4.79E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 Gene3D G3DSA:3.40.50.720 3 336 2.0E-101 T 12-10-2018 vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 324 3.6E-57 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 3.6E-29 T 12-10-2018 vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 PRINTS PR01713 Nucleotide sugar epimerase signature 31 47 3.6E-29 T 12-10-2018 vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 PRINTS PR01713 Nucleotide sugar epimerase signature 217 232 3.6E-29 T 12-10-2018 vfu_A00151 2a78ec88590b9e62dc6a4ffd6d05f190 336 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 3.6E-29 T 12-10-2018 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00812 61fdaba6230469544555bb841cd05bba 319 SUPERFAMILY SSF53850 106 309 8.51E-40 T 12-10-2018 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 Pfam PF03466 LysR substrate binding domain 124 308 2.7E-23 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00812 61fdaba6230469544555bb841cd05bba 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:3.40.190.10 108 307 2.1E-40 T 12-10-2018 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:3.40.190.10 187 283 2.1E-40 T 12-10-2018 vfu_A00812 61fdaba6230469544555bb841cd05bba 319 Gene3D G3DSA:1.10.10.10 14 104 2.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00812 61fdaba6230469544555bb841cd05bba 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.3E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01092 fbd94cd3ed0beedfa86da0cd67a4a664 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 4.8E-25 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 385 1.4E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Gene3D G3DSA:3.40.50.80 275 393 7.3E-32 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Pfam PF00970 Oxidoreductase FAD-binding domain 204 266 1.9E-8 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Gene3D G3DSA:2.40.30.10 126 264 2.9E-52 T 12-10-2018 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Gene3D G3DSA:3.10.20.30 34 125 7.6E-33 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 115 1.5E-10 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.4E-227 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 63.12 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 SUPERFAMILY SSF52343 258 402 8.38E-37 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 SUPERFAMILY SSF54292 37 124 1.04E-20 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 SUPERFAMILY SSF63380 105 272 5.96E-35 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A01033 747a18e7dc337caf444bd6db38eb5ccf 407 PIRSF PIRSF000044 1 407 3.3E-219 T 12-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 44 141 9.9E-36 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 Gene3D G3DSA:2.20.28.140 1 37 5.5E-16 T 12-10-2018 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 Gene3D G3DSA:3.40.30.10 41 144 8.7E-34 T 12-10-2018 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 Pfam PF00085 Thioredoxin 43 140 3.8E-29 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 PIRSF PIRSF000077 38 142 7.0E-33 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 SUPERFAMILY SSF52833 29 142 5.4E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 PRINTS PR00421 Thioredoxin family signature 58 66 1.6E-7 T 12-10-2018 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 PRINTS PR00421 Thioredoxin family signature 106 117 1.6E-7 T 12-10-2018 vfu_B00434 08f767cc2cba605a5ba3fe7fe062bba4 144 PRINTS PR00421 Thioredoxin family signature 66 75 1.6E-7 T 12-10-2018 vfu_B01274 2e863116feb46e063769fbc373501cbd 377 SUPERFAMILY SSF53335 2 375 4.22E-55 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B01274 2e863116feb46e063769fbc373501cbd 377 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 375 1.9E-17 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 vfu_B01274 2e863116feb46e063769fbc373501cbd 377 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 308 339 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site vfu_B01274 2e863116feb46e063769fbc373501cbd 377 Gene3D G3DSA:3.40.50.150 14 369 2.7E-74 T 12-10-2018 vfu_B01274 2e863116feb46e063769fbc373501cbd 377 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 3 368 4.9E-56 T 12-10-2018 vfu_B01274 2e863116feb46e063769fbc373501cbd 377 Gene3D G3DSA:3.40.1350.30 56 212 2.7E-74 T 12-10-2018 vfu_B01274 2e863116feb46e063769fbc373501cbd 377 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 375 1.1E-185 T 12-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 vfu_B01274 2e863116feb46e063769fbc373501cbd 377 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 376 78.529 T 12-10-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 SUPERFAMILY SSF55073 537 696 1.18E-36 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 Gene3D G3DSA:3.30.450.40 173 346 1.5E-7 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 Gene3D G3DSA:3.30.70.270 517 698 2.9E-45 T 12-10-2018 vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 SUPERFAMILY SSF55781 196 344 1.59E-7 T 12-10-2018 vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 529 697 1.3E-35 T 12-10-2018 IPR000160 GGDEF domain vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 Pfam PF00990 Diguanylate cyclase, GGDEF domain 532 694 1.0E-35 T 12-10-2018 IPR000160 GGDEF domain vfu_B00700 7e1f846eccbfd3e9bfa568f13ee14378 708 SMART SM00267 521 698 1.4E-49 T 12-10-2018 IPR000160 GGDEF domain vfu_A01809 0fb612ccbb672323390720089cfead2e 323 Gene3D G3DSA:3.40.190.10 123 249 3.6E-59 T 12-10-2018 vfu_A01809 0fb612ccbb672323390720089cfead2e 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 62 320 2.0E-25 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 vfu_A01809 0fb612ccbb672323390720089cfead2e 323 SUPERFAMILY SSF53850 36 265 9.05E-10 T 12-10-2018 vfu_A01809 0fb612ccbb672323390720089cfead2e 323 PIRSF PIRSF017082 3 323 4.3E-85 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 vfu_A01809 0fb612ccbb672323390720089cfead2e 323 Gene3D G3DSA:3.40.190.150 29 314 3.6E-59 T 12-10-2018 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 481 547 1.5E-11 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 303 477 2.2E-34 T 12-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 95 159 3.0E-25 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 SUPERFAMILY SSF56762 201 547 3.27E-103 T 12-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 224 235 - T 12-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 Gene3D G3DSA:1.10.645.20 189 547 1.4E-107 T 12-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 SUPERFAMILY SSF143243 18 202 2.22E-44 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 Gene3D G3DSA:3.30.460.80 2 142 2.9E-13 T 12-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 44 160 2.1E-23 T 12-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02059 8b0f75800d140f83153cd41c3ecf9308 581 Pfam PF00374 Nickel-dependent hydrogenase 226 294 3.2E-11 T 12-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 vfu_B00436 92c117130604326c520114fa4cc4966e 131 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 13 107 4.0E-35 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA vfu_B00436 92c117130604326c520114fa4cc4966e 131 Pfam PF11756 Nitrous oxide-stimulated promoter 12 116 4.9E-44 T 12-10-2018 IPR020483 Uncharacterised protein family YgbA vfu_A00722 1cff53149da4d81097f592df95fab1ff 207 Pfam PF02441 Flavoprotein 7 182 9.7E-24 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 vfu_A00722 1cff53149da4d81097f592df95fab1ff 207 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 203 34.497 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like vfu_A00722 1cff53149da4d81097f592df95fab1ff 207 SUPERFAMILY SSF52507 6 202 3.01E-56 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 vfu_A00722 1cff53149da4d81097f592df95fab1ff 207 Gene3D G3DSA:3.40.50.1950 1 204 1.6E-75 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 vfu_A00722 1cff53149da4d81097f592df95fab1ff 207 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 8 201 7.1E-56 T 12-10-2018 IPR004507 Flavin prenyltransferase UbiX-like vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 129 148 2.5E-10 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 150 169 2.5E-10 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 362 381 2.5E-10 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 69 87 2.5E-10 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 PRINTS PR00181 Maltose binding protein signature 304 325 2.5E-10 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 SUPERFAMILY SSF53850 26 400 9.72E-88 T 12-10-2018 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 Gene3D G3DSA:3.40.190.10 138 395 1.1E-108 T 12-10-2018 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 Gene3D G3DSA:3.40.190.10 50 362 1.1E-108 T 12-10-2018 vfu_A02093 4fc545ffa7c7992ebef869ed55603522 412 Pfam PF13416 Bacterial extracellular solute-binding protein 46 348 4.0E-52 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A00541 df6f1cf37dcdb32367c82c39fa41f435 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 vfu_A00541 df6f1cf37dcdb32367c82c39fa41f435 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 3.0E-126 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 vfu_A00541 df6f1cf37dcdb32367c82c39fa41f435 463 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 2.3E-130 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 vfu_A00541 df6f1cf37dcdb32367c82c39fa41f435 463 Pfam PF00860 Permease family 23 415 1.5E-97 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 vfu_B00128 d7cdc2edfea6ff56d818aa2bfd8f2d39 362 Gene3D G3DSA:1.10.3720.10 121 352 1.8E-20 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00128 d7cdc2edfea6ff56d818aa2bfd8f2d39 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 1.2E-36 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00128 d7cdc2edfea6ff56d818aa2bfd8f2d39 362 SUPERFAMILY SSF161098 126 343 1.22E-17 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 PRINTS PR01021 OMPA domain signature 222 244 2.5E-5 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 PRINTS PR01021 OMPA domain signature 253 268 2.5E-5 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 PRINTS PR01021 OMPA domain signature 268 284 2.5E-5 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 Pfam PF00691 OmpA family 221 317 1.6E-18 T 12-10-2018 IPR006665 OmpA-like domain vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 Gene3D G3DSA:3.30.1330.60 211 330 1.1E-30 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 SUPERFAMILY SSF103088 194 323 4.19E-28 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01402 9112d30ac64ec784a1244a10bb0ca62a 344 Gene3D G3DSA:2.60.40.2540 64 209 2.1E-10 T 12-10-2018 vfu_A01366 996024558652065c65fc5bc4e81e4e0c 299 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 1.2E-13 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01366 996024558652065c65fc5bc4e81e4e0c 299 SUPERFAMILY SSF64518 1 297 2.09E-53 T 12-10-2018 vfu_A01366 996024558652065c65fc5bc4e81e4e0c 299 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 182 4.0E-53 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Pfam PF11638 DnaA N-terminal domain 4 64 5.8E-19 T 12-10-2018 IPR024633 DnaA N-terminal domain vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.523 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:1.10.1750.10 375 468 2.8E-39 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 3.6E-32 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Pfam PF00308 Bacterial dnaA protein 134 350 1.6E-98 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:3.40.50.300 118 297 2.5E-49 T 12-10-2018 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 5.7E-187 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SMART SM00382 165 378 4.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SUPERFAMILY SSF48295 364 467 7.85E-38 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SUPERFAMILY SSF52540 133 344 3.6E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:3.30.300.180 2 114 3.5E-41 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 Gene3D G3DSA:1.10.8.60 299 369 1.5E-25 T 12-10-2018 vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.7E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like vfu_A00313 d8d1974fedf08ccbaf6ba3f843e8d87e 468 SMART SM00760 376 445 9.0E-45 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 vfu_A01847 78a59b7c00a30a844743b3c966897fbc 256 PIRSF PIRSF028069 2 256 2.9E-98 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 vfu_A01847 78a59b7c00a30a844743b3c966897fbc 256 Pfam PF11932 Protein of unknown function (DUF3450) 9 249 1.9E-82 T 12-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 SMART SM00382 123 295 7.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 Gene3D G3DSA:3.40.50.300 1 91 5.3E-19 T 12-10-2018 vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 Pfam PF00005 ABC transporter 115 250 1.5E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 Gene3D G3DSA:3.40.50.300 93 295 1.5E-45 T 12-10-2018 vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 SUPERFAMILY SSF52540 89 295 2.77E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 SUPERFAMILY SSF52540 1 84 1.5E-15 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01492 642fe60ba794aa900e9a85e38ec7024a 295 ProSitePatterns PS00211 ABC transporters family signature. 222 236 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01716 0949716367548e64b025d7ee7ac84840 458 Pfam PF01554 MatE 253 413 4.6E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A01716 0949716367548e64b025d7ee7ac84840 458 Pfam PF01554 MatE 25 185 3.0E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A01716 0949716367548e64b025d7ee7ac84840 458 PIRSF PIRSF006603 6 458 2.8E-66 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A01716 0949716367548e64b025d7ee7ac84840 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 421 2.3E-58 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 PRINTS PR00060 Ribosomal protein L16 signature 5 34 1.2E-25 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 PRINTS PR00060 Ribosomal protein L16 signature 35 64 1.2E-25 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 6 17 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 Pfam PF00252 Ribosomal protein L16p/L10e 1 79 7.6E-31 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 SUPERFAMILY SSF54686 1 82 3.53E-35 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 1 73 1.1E-35 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00674 823409844aa7855c44d6ae778cdfecf7 84 Gene3D G3DSA:3.90.1170.10 1 84 1.3E-35 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A01338 0b08ccd9e79c0ccff97f8c37dda95810 435 SUPERFAMILY SSF56322 31 425 2.49E-99 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A01338 0b08ccd9e79c0ccff97f8c37dda95810 435 Pfam PF00425 chorismate binding enzyme 165 417 8.6E-71 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal vfu_A01338 0b08ccd9e79c0ccff97f8c37dda95810 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 4.6E-105 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 vfu_A01338 0b08ccd9e79c0ccff97f8c37dda95810 435 Gene3D G3DSA:3.60.120.10 1 427 3.4E-128 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A01338 0b08ccd9e79c0ccff97f8c37dda95810 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.189 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 SUPERFAMILY SSF53383 106 469 1.0E-76 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 SUPERFAMILY SSF46785 6 73 2.24E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 4.7E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 Gene3D G3DSA:3.90.1150.10 111 453 1.3E-83 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 Gene3D G3DSA:1.10.10.10 2 72 5.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 Gene3D G3DSA:3.40.640.10 139 354 1.3E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 SMART SM00345 10 69 4.7E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01253 5f317528d184b27bc6c44e47d808951c 473 Pfam PF00155 Aminotransferase class I and II 139 453 1.4E-24 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A03058 f66c52effae6659e5f55effa5b37c8e4 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.075 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 vfu_A03058 f66c52effae6659e5f55effa5b37c8e4 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 1.5E-130 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 vfu_A03058 f66c52effae6659e5f55effa5b37c8e4 306 Pfam PF04960 Glutaminase 22 306 2.8E-112 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 vfu_A03058 f66c52effae6659e5f55effa5b37c8e4 306 SUPERFAMILY SSF56601 7 306 7.89E-114 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A03058 f66c52effae6659e5f55effa5b37c8e4 306 Gene3D G3DSA:3.40.710.10 3 306 3.2E-109 T 12-10-2018 vfu_B00606 e4364cef31349e756208c4fa608a230b 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 145 6.1E-39 T 12-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 vfu_B00606 e4364cef31349e756208c4fa608a230b 227 SUPERFAMILY SSF49584 139 223 5.89E-11 T 12-10-2018 IPR036316 Pili assembly chaperone, C-terminal domain superfamily vfu_B00606 e4364cef31349e756208c4fa608a230b 227 PRINTS PR00969 Pili chaperone signature 20 29 2.3E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B00606 e4364cef31349e756208c4fa608a230b 227 PRINTS PR00969 Pili chaperone signature 69 90 2.3E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B00606 e4364cef31349e756208c4fa608a230b 227 PRINTS PR00969 Pili chaperone signature 99 116 2.3E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B00606 e4364cef31349e756208c4fa608a230b 227 PRINTS PR00969 Pili chaperone signature 127 142 2.3E-25 T 12-10-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 vfu_B00606 e4364cef31349e756208c4fa608a230b 227 SUPERFAMILY SSF49354 15 145 1.44E-38 T 12-10-2018 IPR008962 PapD-like superfamily vfu_B00606 e4364cef31349e756208c4fa608a230b 227 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 98 115 - T 12-10-2018 IPR018046 Pili assembly chaperone, conserved site vfu_B00606 e4364cef31349e756208c4fa608a230b 227 Gene3D G3DSA:2.60.40.10 151 226 2.5E-8 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B00606 e4364cef31349e756208c4fa608a230b 227 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 222 2.6E-5 T 12-10-2018 IPR016148 Pili assembly chaperone, C-terminal vfu_B00606 e4364cef31349e756208c4fa608a230b 227 Gene3D G3DSA:2.60.40.10 21 146 6.6E-39 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_A00468 341941f8005191edf4793dd92b054955 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.3E-90 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 vfu_A00468 341941f8005191edf4793dd92b054955 224 SMART SM00382 27 215 7.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00468 341941f8005191edf4793dd92b054955 224 Gene3D G3DSA:3.40.50.300 1 223 7.3E-62 T 12-10-2018 vfu_A00468 341941f8005191edf4793dd92b054955 224 SUPERFAMILY SSF52540 1 220 1.02E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00468 341941f8005191edf4793dd92b054955 224 Pfam PF00005 ABC transporter 18 165 3.1E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00468 341941f8005191edf4793dd92b054955 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00232 757e433791d51a1bc1f8c3d9cea30f7c 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.2E-117 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 vfu_A00232 757e433791d51a1bc1f8c3d9cea30f7c 279 SUPERFAMILY SSF53335 9 275 1.2E-96 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00232 757e433791d51a1bc1f8c3d9cea30f7c 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.482 T 12-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 vfu_A00232 757e433791d51a1bc1f8c3d9cea30f7c 279 Gene3D G3DSA:3.40.50.150 1 279 3.3E-116 T 12-10-2018 vfu_A00232 757e433791d51a1bc1f8c3d9cea30f7c 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 Gene3D G3DSA:3.10.650.10 99 268 4.0E-53 T 12-10-2018 vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 Gene3D G3DSA:2.40.430.10 119 204 4.0E-53 T 12-10-2018 vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 SUPERFAMILY SSF160964 15 260 9.15E-84 T 12-10-2018 vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 Gene3D G3DSA:1.10.3720.10 270 512 4.2E-69 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 SUPERFAMILY SSF161098 263 504 1.57E-57 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 Gene3D G3DSA:1.20.58.370 7 96 4.3E-34 T 12-10-2018 IPR035277 MalF, N-terminal vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 101 260 1.4E-58 T 12-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain vfu_B01263 f72525314bf7928dbc12e1419c7cef6d 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 296 502 7.7E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00040 4d10c3ce2cd421e49f69d8bf20480f6c 164 Gene3D G3DSA:3.30.70.1730 1 124 1.8E-32 T 12-10-2018 vfu_A00040 4d10c3ce2cd421e49f69d8bf20480f6c 164 Pfam PF00466 Ribosomal protein L10 6 101 1.2E-25 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 vfu_A00040 4d10c3ce2cd421e49f69d8bf20480f6c 164 SUPERFAMILY SSF160369 4 158 4.32E-44 T 12-10-2018 vfu_A00040 4d10c3ce2cd421e49f69d8bf20480f6c 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 24.357 T 12-10-2018 IPR022973 Ribosomal protein L10 vfu_A00040 4d10c3ce2cd421e49f69d8bf20480f6c 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A02575 091e7ceed1e4daf88d69a412260e7e7a 81 SUPERFAMILY SSF54285 1 81 2.18E-23 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp vfu_A02575 091e7ceed1e4daf88d69a412260e7e7a 81 Gene3D G3DSA:3.10.20.30 1 81 2.0E-25 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A02575 091e7ceed1e4daf88d69a412260e7e7a 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.2E-22 T 12-10-2018 vfu_A02575 091e7ceed1e4daf88d69a412260e7e7a 81 Pfam PF02597 ThiS family 4 81 4.7E-23 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 vfu_A00361 07e851dfb9678fb98e9b20e005ca504e 174 Pfam PF12724 Flavodoxin domain 4 152 9.8E-50 T 12-10-2018 IPR026816 Flavodoxin domain vfu_A00361 07e851dfb9678fb98e9b20e005ca504e 174 SUPERFAMILY SSF52218 2 157 6.99E-31 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A00361 07e851dfb9678fb98e9b20e005ca504e 174 Gene3D G3DSA:3.40.50.360 1 126 5.4E-14 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B01439 144f318214a307c420c16b0f1d1b5e2c 110 Pfam PF02810 SEC-C motif 93 110 2.8E-10 T 12-10-2018 IPR004027 SEC-C motif vfu_B01439 144f318214a307c420c16b0f1d1b5e2c 110 SUPERFAMILY SSF103642 91 110 1.8E-7 T 12-10-2018 vfu_B01439 144f318214a307c420c16b0f1d1b5e2c 110 Gene3D G3DSA:3.10.450.50 39 110 8.9E-10 T 12-10-2018 vfu_B01439 144f318214a307c420c16b0f1d1b5e2c 110 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 3 110 1.8E-49 T 12-10-2018 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 6.6E-48 T 12-10-2018 vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 Gene3D G3DSA:3.30.230.10 1 167 1.2E-7 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 4.4E-30 T 12-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 SUPERFAMILY SSF52540 187 501 3.3E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 1.4E-211 T 12-10-2018 IPR004482 Mg chelatase-related protein vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 391 3.4E-91 T 12-10-2018 IPR000523 Magnesium chelatase ChlI domain vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 SUPERFAMILY SSF54211 2 169 9.86E-32 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 SMART SM00382 210 390 2.0E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 Gene3D G3DSA:3.40.50.300 190 498 2.5E-54 T 12-10-2018 vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 vfu_A00286 da05cd1dd2f9c809266cb8c82dcd920c 507 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 7.6E-5 T 12-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 vfu_A02686 9b40a69694ed334ec189438b91118422 363 Gene3D G3DSA:3.40.50.150 178 358 5.5E-53 T 12-10-2018 vfu_A02686 9b40a69694ed334ec189438b91118422 363 PIRSF PIRSF028774 1 362 2.0E-190 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 vfu_A02686 9b40a69694ed334ec189438b91118422 363 Gene3D G3DSA:3.30.2300.20 80 177 7.1E-39 T 12-10-2018 vfu_A02686 9b40a69694ed334ec189438b91118422 363 SUPERFAMILY SSF53335 186 281 5.99E-12 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02686 9b40a69694ed334ec189438b91118422 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 84.969 T 12-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 vfu_A02686 9b40a69694ed334ec189438b91118422 363 Pfam PF01728 FtsJ-like methyltransferase 188 259 4.9E-6 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 vfu_A02686 9b40a69694ed334ec189438b91118422 363 Gene3D G3DSA:3.30.70.2810 1 78 1.6E-32 T 12-10-2018 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 SUPERFAMILY SSF56519 57 253 1.01E-55 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 2.9E-240 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 3.6E-50 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 SUPERFAMILY SSF56601 255 619 6.99E-97 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 Gene3D G3DSA:3.90.1310.10 65 249 6.7E-54 T 12-10-2018 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 Gene3D G3DSA:3.40.710.10 250 627 3.5E-95 T 12-10-2018 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 2.3E-77 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 53.251 T 12-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A02651 1e217dd5e16875b97f945096fabf719c 627 Gene3D G3DSA:3.30.1390.30 86 161 6.7E-54 T 12-10-2018 vfu_A00353 ac1e13778ca3f3d04fbfbc4e74f9300a 245 Gene3D G3DSA:1.10.3720.10 33 242 4.1E-57 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00353 ac1e13778ca3f3d04fbfbc4e74f9300a 245 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 38 136 4.5E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A00353 ac1e13778ca3f3d04fbfbc4e74f9300a 245 SUPERFAMILY SSF161098 41 227 5.36E-47 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00353 ac1e13778ca3f3d04fbfbc4e74f9300a 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 241 9.7E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02818 43f92dbf9c52e8f304bc80a3c6be02bd 473 Pfam PF07690 Major Facilitator Superfamily 18 407 6.8E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02818 43f92dbf9c52e8f304bc80a3c6be02bd 473 Gene3D G3DSA:1.20.1250.20 258 466 1.5E-18 T 12-10-2018 vfu_A02818 43f92dbf9c52e8f304bc80a3c6be02bd 473 Gene3D G3DSA:1.20.1720.10 14 224 3.7E-47 T 12-10-2018 vfu_A02818 43f92dbf9c52e8f304bc80a3c6be02bd 473 SUPERFAMILY SSF103473 4 466 5.23E-62 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02818 43f92dbf9c52e8f304bc80a3c6be02bd 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 vfu_A02239 c0ef412c72573d1137b786b3c64ad063 440 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 3 99 3.3E-10 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 vfu_A02239 c0ef412c72573d1137b786b3c64ad063 440 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 434 5.3E-39 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 SUPERFAMILY SSF100950 77 232 8.16E-24 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 SMART SM01134 74 235 9.3E-47 T 12-10-2018 vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 Pfam PF00455 DeoR C terminal sensor domain 76 231 3.4E-37 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 8.4E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 8.4E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 Gene3D G3DSA:1.10.10.10 1 57 4.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 SUPERFAMILY SSF46785 7 62 9.0E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 SMART SM00420 9 61 1.6E-16 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00023 f6eef274e7cfb60ec0952c970c025f15 257 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 7.2E-16 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 79 273 1.1E-60 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 9.6E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PRINTS PR00996 Glutamate methyltransferase family signature 35 48 9.6E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PRINTS PR00996 Glutamate methyltransferase family signature 145 161 9.6E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 9.6E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 9.6E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PRINTS PR00996 Glutamate methyltransferase family signature 72 84 9.6E-45 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 SUPERFAMILY SSF53335 79 275 2.95E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 Gene3D G3DSA:1.10.155.10 1 77 9.7E-22 T 12-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 Gene3D G3DSA:3.40.50.150 78 276 4.6E-64 T 12-10-2018 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 PIRSF PIRSF000410 1 276 1.8E-98 T 12-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 SMART SM00138 13 276 4.4E-82 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 66 2.9E-15 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal vfu_B00979 320ff3dfbc08659b7e3c61931efa8f6d 276 SUPERFAMILY SSF47757 6 78 1.03E-19 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 SUPERFAMILY SSF118215 15 403 9.42E-108 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 5.8E-117 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 3.9E-53 T 12-10-2018 vfu_A02224 07196e058f55c5300f0875c4010b38a8 419 Gene3D G3DSA:1.10.3860.10 2 419 1.3E-115 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 Pfam PF02378 Phosphotransferase system, EIIC 11 324 1.4E-80 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 SUPERFAMILY SSF55604 410 484 2.35E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 Pfam PF00367 phosphotransferase system, EIIB 413 446 1.9E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 482 1.1E-225 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 Gene3D G3DSA:3.30.1360.60 406 487 5.4E-26 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A02605 3ddeab61624ee4aff79b35f0acbeb026 496 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 1.7E-22 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 vfu_A00739 84d75126990a451324aca35da02ce968 321 Pfam PF01699 Sodium/calcium exchanger protein 5 144 1.4E-27 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 vfu_A00739 84d75126990a451324aca35da02ce968 321 Pfam PF01699 Sodium/calcium exchanger protein 175 316 1.2E-27 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 vfu_A00739 84d75126990a451324aca35da02ce968 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 1.3E-84 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 vfu_A00739 84d75126990a451324aca35da02ce968 321 Gene3D G3DSA:1.20.1420.30 35 308 2.3E-86 T 12-10-2018 vfu_A00739 84d75126990a451324aca35da02ce968 321 Gene3D G3DSA:1.20.58.1130 8 206 2.3E-86 T 12-10-2018 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 7.4E-126 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 66.177 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 Gene3D G3DSA:3.40.47.10 5 434 4.9E-110 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 SUPERFAMILY SSF53901 296 434 4.04E-31 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 5.9E-35 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 PIRSF PIRSF000429 8 435 1.8E-118 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 SUPERFAMILY SSF53901 14 294 5.26E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 4.8E-63 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 vfu_A02553 43ccc13764d2ef6140e0f96f7dac9fc2 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 3.8E-264 T 12-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 vfu_B01399 60b859d2721434e8d5e8ce8634eacb06 104 Pfam PF00034 Cytochrome c 32 100 1.9E-7 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01399 60b859d2721434e8d5e8ce8634eacb06 104 SUPERFAMILY SSF46626 21 102 2.68E-19 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B01399 60b859d2721434e8d5e8ce8634eacb06 104 Gene3D G3DSA:1.10.760.10 20 103 2.6E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01424 712385d418686f47c386c6141927d21f 249 SUPERFAMILY SSF46689 201 242 7.89E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01424 712385d418686f47c386c6141927d21f 249 Pfam PF12833 Helix-turn-helix domain 164 241 4.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01424 712385d418686f47c386c6141927d21f 249 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 195 236 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A01424 712385d418686f47c386c6141927d21f 249 SUPERFAMILY SSF51182 15 164 7.5E-8 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A01424 712385d418686f47c386c6141927d21f 249 SUPERFAMILY SSF46689 141 193 5.82E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01424 712385d418686f47c386c6141927d21f 249 SMART SM00342 158 240 3.5E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_A01424 712385d418686f47c386c6141927d21f 249 Gene3D G3DSA:1.10.10.60 140 247 5.1E-22 T 12-10-2018 vfu_A01424 712385d418686f47c386c6141927d21f 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A01424 712385d418686f47c386c6141927d21f 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 3.9E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_A01424 712385d418686f47c386c6141927d21f 249 Gene3D G3DSA:2.60.120.10 3 74 1.5E-5 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 Gene3D G3DSA:3.40.630.10 29 405 5.9E-126 T 12-10-2018 vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 21 408 2.0E-110 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 SUPERFAMILY SSF53187 12 411 3.01E-75 T 12-10-2018 vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 Pfam PF01546 Peptidase family M20/M25/M40 83 409 7.9E-23 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 SUPERFAMILY SSF55031 217 330 5.06E-25 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 PIRSF PIRSF001235 8 412 7.0E-125 T 12-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 vfu_B00180 3fc346e3865f34c98e9e69a034f5aaba 412 Gene3D G3DSA:3.30.70.360 217 329 5.9E-126 T 12-10-2018 vfu_A00227 2ee3bb34f061c55bbc64cd46a33ada35 287 Gene3D G3DSA:3.20.20.150 6 285 3.2E-87 T 12-10-2018 vfu_A00227 2ee3bb34f061c55bbc64cd46a33ada35 287 SUPERFAMILY SSF51658 29 257 3.93E-10 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily vfu_A00227 2ee3bb34f061c55bbc64cd46a33ada35 287 Pfam PF05114 Protein of unknown function (DUF692) 9 273 6.2E-106 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 vfu_A00227 2ee3bb34f061c55bbc64cd46a33ada35 287 Hamap MF_00697 UPF0276 protein . 10 282 44.285 T 12-10-2018 IPR007801 Uncharacterised protein family UPF0276 vfu_A01196 1cda6b300c7fe3cc435e7ed4a459e423 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 1.5E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 vfu_B01029 f0db562f33469b768d7b27eb5f2747e0 123 SMART SM00345 14 73 9.0E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01029 f0db562f33469b768d7b27eb5f2747e0 123 SUPERFAMILY SSF46785 3 77 6.81E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01029 f0db562f33469b768d7b27eb5f2747e0 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 7.0E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01029 f0db562f33469b768d7b27eb5f2747e0 123 Gene3D G3DSA:1.10.10.10 7 123 1.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00847 df661fa52f03a85843ffecbeb9be3276 203 Pfam PF13505 Outer membrane protein beta-barrel domain 41 203 1.3E-9 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel vfu_B00847 df661fa52f03a85843ffecbeb9be3276 203 SUPERFAMILY SSF56925 42 203 1.52E-13 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_B00847 df661fa52f03a85843ffecbeb9be3276 203 Gene3D G3DSA:2.40.160.20 41 203 1.7E-10 T 12-10-2018 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 SUPERFAMILY SSF90123 14 327 1.2E-72 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 Gene3D G3DSA:3.40.50.300 329 581 3.8E-97 T 12-10-2018 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 4.3E-244 T 12-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 Pfam PF00664 ABC transporter transmembrane region 28 295 5.3E-55 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 SUPERFAMILY SSF52540 334 580 5.22E-95 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 SMART SM00382 368 555 2.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 Pfam PF00005 ABC transporter 359 509 8.1E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02388 58dcb3f1cec385ea2670a31c6747ef68 582 Gene3D G3DSA:1.20.1560.10 2 328 3.0E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A01713 f4946b110c4424ffd9ef1e17a7256f40 402 Gene3D G3DSA:1.20.1720.10 19 397 2.3E-101 T 12-10-2018 vfu_A01713 f4946b110c4424ffd9ef1e17a7256f40 402 Pfam PF07690 Major Facilitator Superfamily 26 365 5.3E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01713 f4946b110c4424ffd9ef1e17a7256f40 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 396 2.5E-118 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 vfu_A01713 f4946b110c4424ffd9ef1e17a7256f40 402 SUPERFAMILY SSF103473 8 400 2.35E-64 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00164 0c06b3f7b8355f80fda47d78f2dae860 160 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 3.3E-42 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00164 0c06b3f7b8355f80fda47d78f2dae860 160 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 25.961 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00164 0c06b3f7b8355f80fda47d78f2dae860 160 Gene3D G3DSA:3.30.1060.10 1 156 4.6E-40 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00164 0c06b3f7b8355f80fda47d78f2dae860 160 SUPERFAMILY SSF55068 1 148 4.32E-48 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00164 0c06b3f7b8355f80fda47d78f2dae860 160 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 145 7.6E-32 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 Gene3D G3DSA:3.40.50.300 338 596 5.0E-88 T 12-10-2018 vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 Pfam PF00664 ABC transporter transmembrane region 31 300 1.7E-34 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 Gene3D G3DSA:1.20.1560.10 1 333 1.0E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 SMART SM00382 371 556 2.0E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 SUPERFAMILY SSF90123 15 329 3.01E-67 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 SUPERFAMILY SSF52540 339 581 8.09E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00552 f0bb5528014f72a7486b62890228cb61 598 Pfam PF00005 ABC transporter 362 510 1.3E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 SMART SM00091 98 164 5.2E-6 T 12-10-2018 IPR000014 PAS domain vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 5.9E-138 T 12-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 SUPERFAMILY SSF55874 261 427 1.26E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 3.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Gene3D G3DSA:1.10.287.130 201 275 2.8E-20 T 12-10-2018 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 SUPERFAMILY SSF47384 192 271 1.92E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Gene3D G3DSA:3.30.565.10 282 429 6.7E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 5.1E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 SMART SM00388 205 272 2.7E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 204 3.4E-6 T 12-10-2018 IPR000014 PAS domain vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 SUPERFAMILY SSF55785 86 197 3.49E-11 T 12-10-2018 IPR035965 PAS domain superfamily vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 6.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 6.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 6.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 6.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF00989 PAS fold 99 179 1.9E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Gene3D G3DSA:3.30.450.20 85 200 2.9E-10 T 12-10-2018 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 3.0E-31 T 12-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 vfu_A02812 41994fcaafe8ff673d4054f954d8a855 432 SMART SM00387 317 429 4.2E-33 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A01518 d447f8188a280394762749f88011d153 210 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 44 196 6.3E-9 T 12-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like vfu_A01518 d447f8188a280394762749f88011d153 210 SUPERFAMILY SSF89392 31 196 1.06E-16 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX vfu_A01518 d447f8188a280394762749f88011d153 210 Gene3D G3DSA:2.50.20.10 30 210 3.7E-22 T 12-10-2018 vfu_A03108 7813bbc791156b1de3f9670471400773 159 Gene3D G3DSA:3.30.700.10 7 159 9.3E-14 T 12-10-2018 vfu_A03108 7813bbc791156b1de3f9670471400773 159 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03108 7813bbc791156b1de3f9670471400773 159 SUPERFAMILY SSF54523 7 61 4.16E-13 T 12-10-2018 vfu_A03108 7813bbc791156b1de3f9670471400773 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.6E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03108 7813bbc791156b1de3f9670471400773 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.7E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A01920 0590d89bdd49b2299f8f73a55543ddfb 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 4.0E-63 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 vfu_A01920 0590d89bdd49b2299f8f73a55543ddfb 149 Pfam PF06303 MatP N-terminal domain 2 85 5.1E-44 T 12-10-2018 IPR035087 MatP, N-terminal vfu_A01920 0590d89bdd49b2299f8f73a55543ddfb 149 Gene3D G3DSA:1.20.1270.380 1 89 3.7E-47 T 12-10-2018 IPR038339 MatP, N-terminal domain superfamily vfu_A01920 0590d89bdd49b2299f8f73a55543ddfb 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 5.4E-27 T 12-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain vfu_A01920 0590d89bdd49b2299f8f73a55543ddfb 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.122 T 12-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 vfu_A01920 0590d89bdd49b2299f8f73a55543ddfb 149 Gene3D G3DSA:1.10.1220.10 98 149 2.3E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 vfu_B00794 f8c16eb006d356364efd75096332b9d9 174 Pfam PF05638 Type VI secretion system effector, Hcp 5 145 3.8E-22 T 12-10-2018 IPR008514 Type VI secretion system effector, Hcp vfu_B00794 f8c16eb006d356364efd75096332b9d9 174 SUPERFAMILY SSF141452 1 168 4.84E-26 T 12-10-2018 IPR036624 Hcp1-like superfamily vfu_B00794 f8c16eb006d356364efd75096332b9d9 174 Gene3D G3DSA:2.30.110.20 1 172 3.3E-21 T 12-10-2018 IPR036624 Hcp1-like superfamily vfu_B01280 23576ff1ffff44270362fc51df574552 100 Pfam PF04175 Protein of unknown function (DUF406) 9 96 9.0E-29 T 12-10-2018 IPR005272 Conserved hypothetical protein CHP00743 vfu_B01280 23576ff1ffff44270362fc51df574552 100 Gene3D G3DSA:3.30.70.860 1 100 3.6E-43 T 12-10-2018 IPR035571 UPF0234-like, C-terminal vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 Pfam PF01467 Cytidylyltransferase-like 10 138 2.1E-20 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.072 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 Gene3D G3DSA:3.40.50.620 1 163 2.6E-54 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 SUPERFAMILY SSF52374 8 162 5.63E-45 T 12-10-2018 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 2.9E-58 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 8.3E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 8.3E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 8.3E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 8.3E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 8.3E-50 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 vfu_A00149 963976e8e79ab4f75c7441d5c03e8902 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 8.3E-20 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 vfu_A01981 f93f657c0cb6295fffa3023836fe9d28 402 Pfam PF06629 MltA-interacting protein MipA 12 204 2.3E-17 T 12-10-2018 IPR010583 MltA-interacting MipA vfu_A01981 f93f657c0cb6295fffa3023836fe9d28 402 SUPERFAMILY SSF56935 68 147 6.41E-5 T 12-10-2018 vfu_B00024 6cc6b0803b3b4672293171f5f6bd1304 185 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 22 182 1.8E-38 T 12-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component vfu_B00024 6cc6b0803b3b4672293171f5f6bd1304 185 Gene3D G3DSA:3.40.50.10610 11 185 9.8E-14 T 12-10-2018 vfu_B00024 6cc6b0803b3b4672293171f5f6bd1304 185 SUPERFAMILY SSF159594 21 184 1.33E-28 T 12-10-2018 vfu_A00593 5fed6d83103f6f5a68fdc1df244fb086 178 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.2E-67 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 vfu_A00593 5fed6d83103f6f5a68fdc1df244fb086 178 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.946 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 vfu_A00593 5fed6d83103f6f5a68fdc1df244fb086 178 Pfam PF03737 Aldolase/RraA 6 152 7.7E-39 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein vfu_A00593 5fed6d83103f6f5a68fdc1df244fb086 178 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 3.1E-82 T 12-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 vfu_A00593 5fed6d83103f6f5a68fdc1df244fb086 178 Gene3D G3DSA:3.50.30.40 1 161 1.2E-60 T 12-10-2018 vfu_A00593 5fed6d83103f6f5a68fdc1df244fb086 178 SUPERFAMILY SSF89562 2 158 4.84E-46 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily vfu_A01883 1bb24349a62e9b5e4f21a335a3191e42 65 PIRSF PIRSF036704 1 65 6.1E-31 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing vfu_A01883 1bb24349a62e9b5e4f21a335a3191e42 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 37 1.1E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_A01883 1bb24349a62e9b5e4f21a335a3191e42 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 1.7E-25 T 12-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing vfu_B01142 00ad20aa0f3805cb9d562b807a030153 64 Gene3D G3DSA:2.60.40.1090 1 64 2.2E-6 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_B01142 00ad20aa0f3805cb9d562b807a030153 64 SUPERFAMILY SSF49401 4 64 7.46E-6 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:3.40.50.300 4 266 3.7E-100 T 12-10-2018 vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.636 T 12-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:1.10.486.10 377 546 7.1E-124 T 12-10-2018 vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 2.1E-78 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 SUPERFAMILY SSF52540 1 640 3.09E-163 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:3.40.50.300 274 634 7.1E-124 T 12-10-2018 vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Gene3D G3DSA:1.10.10.160 108 181 3.7E-100 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily vfu_A00250 c027d462db677e4d872b33a19b9a8796 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 4.5E-75 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 vfu_A01985 3ecb1c659e68ec02848edd5d988664bf 156 SUPERFAMILY SSF53098 5 155 1.69E-23 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A01985 3ecb1c659e68ec02848edd5d988664bf 156 Pfam PF00929 Exonuclease 6 151 1.5E-8 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01985 3ecb1c659e68ec02848edd5d988664bf 156 Gene3D G3DSA:3.30.420.10 2 156 6.7E-31 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A00138 08859f8cf81b101013b2c42ea072bd8d 350 Pfam PF13439 Glycosyltransferase Family 4 4 165 1.4E-8 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 vfu_A00138 08859f8cf81b101013b2c42ea072bd8d 350 Gene3D G3DSA:3.40.50.2000 162 320 1.3E-49 T 12-10-2018 vfu_A00138 08859f8cf81b101013b2c42ea072bd8d 350 Pfam PF00534 Glycosyl transferases group 1 178 319 5.2E-32 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_A00138 08859f8cf81b101013b2c42ea072bd8d 350 Gene3D G3DSA:3.40.50.2000 4 161 1.3E-49 T 12-10-2018 vfu_A00138 08859f8cf81b101013b2c42ea072bd8d 350 SUPERFAMILY SSF53756 39 320 3.18E-51 T 12-10-2018 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF55957 432 544 1.44E-19 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF53738 305 446 1.18E-31 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF53738 209 317 6.94E-8 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.40.120.10 12 218 4.0E-75 T 12-10-2018 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.40.120.10 221 318 3.2E-45 T 12-10-2018 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.40.120.10 319 442 2.4E-35 T 12-10-2018 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 1.4E-6 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 6.8E-40 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 SUPERFAMILY SSF53738 26 235 5.65E-52 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Gene3D G3DSA:3.30.310.50 443 546 3.9E-35 T 12-10-2018 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 12-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.6E-17 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A01226 b71a1afbcf2dd4a1d053a41e3c46d1c4 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 2.7E-29 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.8E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 267 286 1.8E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 1.8E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.8E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 185 198 1.8E-20 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 278 366 1.3E-17 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 35 59 1.5E-17 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 61 88 1.5E-17 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 105 129 1.5E-17 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 135 157 1.5E-17 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 302 315 1.5E-17 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 PRINTS PR01182 Ornithine decarboxylase signature 333 343 1.5E-17 T 12-10-2018 IPR002433 Ornithine decarboxylase GO:0006596 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Gene3D G3DSA:2.40.37.10 30 381 1.6E-123 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Gene3D G3DSA:3.20.20.10 42 279 1.6E-123 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 SUPERFAMILY SSF51419 41 279 9.89E-60 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 SUPERFAMILY SSF50621 259 387 1.95E-34 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A02026 bccf4b15f0ee82dc9d2a721ba1cf0247 399 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 277 9.4E-52 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 3.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 181 201 3.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 3.9E-21 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 Pfam PF00672 HAMP domain 206 249 4.0E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 SUPERFAMILY SSF58104 226 535 8.63E-71 T 12-10-2018 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 Gene3D G3DSA:3.30.450.20 37 182 2.4E-30 T 12-10-2018 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM00304 206 258 2.6E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM00304 259 311 25.0 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 Pfam PF17200 Single Cache domain 2 40 182 7.0E-27 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM01049 36 125 4.7E-20 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 Gene3D G3DSA:1.10.287.950 206 535 1.4E-73 T 12-10-2018 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 SMART SM00283 273 534 2.2E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01727 7e8f86e0d88138c10da6b7a334416da9 535 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 500 6.6E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF02824 TGS domain 389 447 5.8E-20 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF13291 ACT domain 627 703 3.0E-16 T 12-10-2018 IPR002912 ACT domain vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 703 2.7E-272 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF81271 376 448 4.91E-21 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 SMART SM00471 41 153 5.2E-10 T 12-10-2018 IPR003607 HD/PDEase domain vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:3.30.460.10 193 325 4.0E-46 T 12-10-2018 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:1.10.3210.10 3 190 8.3E-79 T 12-10-2018 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.3E-34 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF109604 3 190 1.29E-73 T 12-10-2018 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:3.10.20.30 382 456 1.8E-29 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF55021 632 703 4.96E-9 T 12-10-2018 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Gene3D G3DSA:3.30.70.260 627 706 8.8E-15 T 12-10-2018 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 SMART SM00954 235 345 2.3E-58 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 SUPERFAMILY SSF81301 180 393 3.27E-59 T 12-10-2018 vfu_A00544 0b28ca467762dc8d6a6b66fd4a967af4 706 Pfam PF13328 HD domain 28 175 1.2E-52 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 SMART SM00450 5 128 9.6E-20 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 SMART SM00450 152 272 3.2E-16 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 Pfam PF00581 Rhodanese-like domain 155 267 1.2E-9 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 Pfam PF00581 Rhodanese-like domain 6 124 9.3E-14 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 Gene3D G3DSA:3.40.250.10 155 276 7.8E-38 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 SUPERFAMILY SSF52821 155 275 2.75E-32 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 SUPERFAMILY SSF52821 2 133 1.17E-34 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00098 371d9375d1cfec0d7f4c4ae8edc7d1dc 276 Gene3D G3DSA:3.40.250.10 1 141 3.2E-42 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A01475 9e8e584b0fc7884a251f6afe6c9b0661 434 PIRSF PIRSF000337 2 434 6.1E-130 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 vfu_A01475 9e8e584b0fc7884a251f6afe6c9b0661 434 Gene3D G3DSA:3.20.20.30 2 434 2.8E-113 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 vfu_A01475 9e8e584b0fc7884a251f6afe6c9b0661 434 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 19 431 3.7E-114 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 vfu_A01475 9e8e584b0fc7884a251f6afe6c9b0661 434 Pfam PF00296 Luciferase-like monooxygenase 25 387 1.3E-51 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 vfu_A01475 9e8e584b0fc7884a251f6afe6c9b0661 434 SUPERFAMILY SSF51679 5 434 4.19E-101 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 vfu_A00772 0980f5c84cb132dc21afc4ce97d81c23 411 Pfam PF13356 Arm DNA-binding domain 8 105 4.8E-11 T 12-10-2018 IPR025166 Integrase, DNA-binding domain vfu_A00772 0980f5c84cb132dc21afc4ce97d81c23 411 Gene3D G3DSA:3.30.160.390 6 107 2.4E-8 T 12-10-2018 IPR038488 Integrase, DNA-binding domain superfamily vfu_A00772 0980f5c84cb132dc21afc4ce97d81c23 411 Gene3D G3DSA:1.10.443.10 220 403 2.7E-29 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A00772 0980f5c84cb132dc21afc4ce97d81c23 411 Gene3D G3DSA:1.10.150.130 109 216 1.8E-5 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A00772 0980f5c84cb132dc21afc4ce97d81c23 411 SUPERFAMILY SSF56349 126 393 8.01E-42 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A00772 0980f5c84cb132dc21afc4ce97d81c23 411 Pfam PF00589 Phage integrase family 221 386 3.6E-19 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A01774 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:1.20.1600.10 50 450 5.8E-107 T 12-10-2018 vfu_A01774 32da77facae6642cbc1bacb4cbcaaf38 456 Pfam PF02321 Outer membrane efflux protein 60 240 4.1E-27 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01774 32da77facae6642cbc1bacb4cbcaaf38 456 Pfam PF02321 Outer membrane efflux protein 271 449 5.4E-18 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01774 32da77facae6642cbc1bacb4cbcaaf38 456 Gene3D G3DSA:2.20.200.10 97 340 5.8E-107 T 12-10-2018 vfu_A01774 32da77facae6642cbc1bacb4cbcaaf38 456 SUPERFAMILY SSF56954 2 450 3.53E-88 T 12-10-2018 vfu_A01774 32da77facae6642cbc1bacb4cbcaaf38 456 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 450 4.1E-82 T 12-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 vfu_B01079 a8bc3c4814a88b9bec97ad75de30aa6d 99 Gene3D G3DSA:2.60.40.10 6 99 1.6E-14 T 12-10-2018 IPR013783 Immunoglobulin-like fold vfu_B01079 a8bc3c4814a88b9bec97ad75de30aa6d 99 SUPERFAMILY SSF81296 13 95 2.29E-12 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_A00719 c78bf72c717005f07de8bf74bc6db313 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 vfu_A00719 c78bf72c717005f07de8bf74bc6db313 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.236 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 vfu_A00719 c78bf72c717005f07de8bf74bc6db313 176 Gene3D G3DSA:3.90.80.10 1 175 1.2E-67 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 vfu_A00719 c78bf72c717005f07de8bf74bc6db313 176 SUPERFAMILY SSF50324 3 174 1.57E-65 T 12-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 vfu_A00719 c78bf72c717005f07de8bf74bc6db313 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.7E-52 T 12-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Gene3D G3DSA:2.60.40.3110 265 354 7.8E-35 T 12-10-2018 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 SUPERFAMILY SSF110997 886 954 3.66E-7 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Pfam PF13954 PapC N-terminal domain 32 173 1.1E-32 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Gene3D G3DSA:2.60.40.2610 670 759 5.5E-27 T 12-10-2018 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Pfam PF13953 PapC C-terminal domain 769 822 2.2E-14 T 12-10-2018 IPR025949 PapC-like, C-terminal domain vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 SUPERFAMILY SSF141729 55 163 4.19E-23 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Gene3D G3DSA:3.10.20.410 29 150 1.1E-19 T 12-10-2018 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Gene3D G3DSA:2.60.40.2070 761 846 3.4E-13 T 12-10-2018 vfu_B01316 ea7091261c57f693aada4ad8ebc4d49e 959 Pfam PF00577 Outer membrane usher protein 192 753 1.5E-137 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 vfu_B00814 d9daae0352f4659f98313527092531d0 564 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 552 1.9E-106 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 vfu_B00814 d9daae0352f4659f98313527092531d0 564 Pfam PF02652 L-lactate permease 7 547 3.6E-109 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 vfu_A01777 baab384f21ac60981bf8020dd9a862a8 431 Pfam PF03313 Serine dehydratase alpha chain 162 426 5.0E-97 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit vfu_A01777 baab384f21ac60981bf8020dd9a862a8 431 SUPERFAMILY SSF143548 1 135 7.59E-37 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 vfu_A01777 baab384f21ac60981bf8020dd9a862a8 431 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 1 429 1.0E-209 T 12-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 vfu_A01777 baab384f21ac60981bf8020dd9a862a8 431 Gene3D G3DSA:3.30.1330.90 1 137 1.6E-36 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 vfu_A01777 baab384f21ac60981bf8020dd9a862a8 431 Pfam PF03315 Serine dehydratase beta chain 1 133 2.5E-37 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 vfu_B00988 dc3c6af90c62b22805bc1accca76607b 323 Gene3D G3DSA:1.10.10.2830 153 271 7.0E-15 T 12-10-2018 vfu_B00988 dc3c6af90c62b22805bc1accca76607b 323 Pfam PF02195 ParB-like nuclease domain 74 142 2.5E-8 T 12-10-2018 IPR003115 ParB/Sulfiredoxin vfu_B00988 dc3c6af90c62b22805bc1accca76607b 323 SUPERFAMILY SSF110849 73 150 1.52E-8 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily vfu_B00988 dc3c6af90c62b22805bc1accca76607b 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 68 230 1.1E-22 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 vfu_B00988 dc3c6af90c62b22805bc1accca76607b 323 SMART SM00470 58 149 3.0E-7 T 12-10-2018 IPR003115 ParB/Sulfiredoxin vfu_A03030 6ec64e0838f862899a7318328d6c46ae 232 Pfam PF04402 Protein of unknown function (DUF541) 31 228 1.4E-39 T 12-10-2018 IPR007497 Protein of unknown function DUF541 vfu_A03030 6ec64e0838f862899a7318328d6c46ae 232 Gene3D G3DSA:3.30.110.170 32 228 4.3E-48 T 12-10-2018 vfu_A03030 6ec64e0838f862899a7318328d6c46ae 232 Gene3D G3DSA:3.30.70.2970 41 148 4.3E-48 T 12-10-2018 vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 Gene3D G3DSA:3.40.50.1820 5 235 2.8E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 Pfam PF00561 alpha/beta hydrolase fold 15 111 2.3E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 SUPERFAMILY SSF53474 5 230 4.4E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01224 968cd1572b1944c5ad09653df36aef01 295 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 9.3E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02323 730e76f1c1b6398448e98391ee3ecace 350 Gene3D G3DSA:3.90.1640.10 41 222 1.6E-27 T 12-10-2018 vfu_A02323 730e76f1c1b6398448e98391ee3ecace 350 Pfam PF01368 DHH family 42 183 4.7E-13 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 vfu_A02323 730e76f1c1b6398448e98391ee3ecace 350 Pfam PF02272 DHHA1 domain 233 325 4.5E-7 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 vfu_A02323 730e76f1c1b6398448e98391ee3ecace 350 SUPERFAMILY SSF64182 41 326 1.57E-44 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily vfu_A00467 321d988a189922121a80ab65a27d9b70 403 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 127 400 64.186 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 Pfam PF02881 SRP54-type protein, helical bundle domain 119 180 5.4E-13 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 373 386 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 Gene3D G3DSA:3.40.50.300 196 388 3.7E-116 T 12-10-2018 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 SUPERFAMILY SSF52540 196 400 1.01E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00467 321d988a189922121a80ab65a27d9b70 403 SMART SM00962 199 400 1.8E-122 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 SMART SM00963 104 184 1.6E-25 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 127 399 3.8E-114 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 Gene3D G3DSA:1.20.120.140 101 398 3.7E-116 T 12-10-2018 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 SMART SM00382 198 378 3.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00467 321d988a189922121a80ab65a27d9b70 403 SUPERFAMILY SSF47364 99 178 1.44E-21 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 vfu_A00467 321d988a189922121a80ab65a27d9b70 403 Pfam PF00448 SRP54-type protein, GTPase domain 199 399 3.4E-77 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 vfu_B01021 af7628830ea18b6ab2ee953fe6207280 182 Gene3D G3DSA:3.40.630.30 2 175 3.7E-46 T 12-10-2018 vfu_B01021 af7628830ea18b6ab2ee953fe6207280 182 SUPERFAMILY SSF55729 6 174 5.59E-43 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B01021 af7628830ea18b6ab2ee953fe6207280 182 Pfam PF13302 Acetyltransferase (GNAT) domain 16 150 2.3E-21 T 12-10-2018 IPR000182 GNAT domain vfu_B01096 06212f811648d6395f25e0d91b777f4d 210 PIRSF PIRSF006324 1 207 7.2E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B01096 06212f811648d6395f25e0d91b777f4d 210 Pfam PF01810 LysE type translocator 16 205 1.5E-26 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A00398 a5c90b076f9678458404ddb0617e1197 319 Gene3D G3DSA:3.40.50.2300 28 288 1.2E-104 T 12-10-2018 vfu_A00398 a5c90b076f9678458404ddb0617e1197 319 Gene3D G3DSA:3.40.50.2300 129 270 1.2E-104 T 12-10-2018 vfu_A00398 a5c90b076f9678458404ddb0617e1197 319 Pfam PF13407 Periplasmic binding protein domain 33 277 5.1E-43 T 12-10-2018 IPR025997 Periplasmic binding protein vfu_A00398 a5c90b076f9678458404ddb0617e1197 319 SUPERFAMILY SSF53822 23 307 1.73E-69 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A01359 b9dab55e3025be0c67bbac7a68cbfbf0 398 SUPERFAMILY SSF117143 73 359 2.88E-80 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A01359 b9dab55e3025be0c67bbac7a68cbfbf0 398 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 380 1.9E-95 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01359 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF07559 Flagellar basal body protein FlaE 172 279 9.3E-24 T 12-10-2018 IPR011491 Flagellar hook protein FlgE vfu_A01359 b9dab55e3025be0c67bbac7a68cbfbf0 398 Gene3D G3DSA:2.60.98.20 144 280 3.4E-35 T 12-10-2018 IPR037058 Flagellar hook protein FlgE superfamily vfu_A01359 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF00460 Flagella basal body rod protein 3 33 3.0E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01359 b9dab55e3025be0c67bbac7a68cbfbf0 398 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 320 396 8.2E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_B00353 a0835241f43fa0c8a4a2a9c0a46125bf 261 Pfam PF13531 Bacterial extracellular solute-binding protein 28 251 2.6E-41 T 12-10-2018 vfu_B00353 a0835241f43fa0c8a4a2a9c0a46125bf 261 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 32 249 1.8E-62 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 vfu_B00353 a0835241f43fa0c8a4a2a9c0a46125bf 261 SUPERFAMILY SSF53850 25 251 4.21E-59 T 12-10-2018 vfu_B00353 a0835241f43fa0c8a4a2a9c0a46125bf 261 PIRSF PIRSF004846 2 253 3.1E-65 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 vfu_B00353 a0835241f43fa0c8a4a2a9c0a46125bf 261 Gene3D G3DSA:3.40.190.10 105 216 2.9E-76 T 12-10-2018 vfu_B00353 a0835241f43fa0c8a4a2a9c0a46125bf 261 Gene3D G3DSA:3.40.190.10 29 250 2.9E-76 T 12-10-2018 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.914 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 SUPERFAMILY SSF52949 1 184 6.47E-52 T 12-10-2018 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 Gene3D G3DSA:3.40.220.10 1 159 1.5E-59 T 12-10-2018 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 5.1E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 5.1E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 5.1E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 5.1E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 5.1E-55 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 Gene3D G3DSA:3.40.630.10 181 497 3.3E-141 T 12-10-2018 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 7.1E-124 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 SUPERFAMILY SSF53187 179 496 1.91E-125 T 12-10-2018 vfu_A00761 e73549ecc664c75407cfc73d55355dd0 502 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 6.6E-34 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 283 356 6.9E-10 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 Gene3D G3DSA:2.60.40.420 120 259 1.2E-53 T 12-10-2018 IPR008972 Cupredoxin vfu_B01100 27ce64714c66971a05855428b3b13e41 389 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 123 245 9.8E-38 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 SUPERFAMILY SSF49503 121 260 4.23E-52 T 12-10-2018 IPR008972 Cupredoxin vfu_B01100 27ce64714c66971a05855428b3b13e41 389 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 Gene3D G3DSA:1.10.760.10 264 387 1.1E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 SUPERFAMILY SSF46626 225 367 1.49E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 85 97 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 138 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 PRINTS PR01166 Cytochrome c oxidase subunit II signature 97 117 2.8E-39 T 12-10-2018 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 SUPERFAMILY SSF81464 24 117 9.16E-27 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 28 108 6.4E-15 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 3.6E-60 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01100 27ce64714c66971a05855428b3b13e41 389 Gene3D G3DSA:1.10.287.90 26 119 1.0E-25 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF00575 S1 RNA binding domain 620 691 3.6E-19 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF54791 553 630 7.06E-17 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 PIRSF PIRSF005499 2 711 5.0E-300 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:3.30.1370.10 551 622 8.8E-20 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF54211 293 489 3.69E-47 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF55666 451 549 1.54E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 2.1E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.8E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:3.30.230.70 2 229 4.0E-77 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:3.30.230.70 234 550 1.5E-115 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SMART SM00316 621 691 6.7E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF50249 607 695 9.94E-22 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF55666 146 236 3.09E-28 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SMART SM00322 553 618 5.7E-12 T 12-10-2018 IPR004087 K Homology domain GO:0003676 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.2E-25 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Gene3D G3DSA:2.40.50.140 623 694 2.6E-30 T 12-10-2018 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.309 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF00013 KH domain 557 614 1.1E-9 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 SUPERFAMILY SSF54211 5 145 1.92E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 5.0E-13 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A00944 302726a4c1615d8c1227826f01a9c2d1 711 Pfam PF03725 3' exoribonuclease family, domain 2 461 528 7.2E-5 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 PIRSF PIRSF002096 1 134 2.9E-53 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 Gene3D G3DSA:1.10.287.1050 1 83 4.3E-29 T 12-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 SUPERFAMILY SSF81273 2 58 1.75E-16 T 12-10-2018 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 SUPERFAMILY SSF81273 94 133 1.26E-9 T 12-10-2018 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 SMART SM00528 88 134 7.5E-22 T 12-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 Pfam PF00816 H-NS histone family 37 128 4.4E-18 T 12-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 vfu_A01587 1a51e1b96cc7929ba9478c814a602105 134 Gene3D G3DSA:4.10.430.10 92 134 3.7E-22 T 12-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 4.2E-32 T 12-10-2018 IPR025121 GTPase HflX, N-terminal vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.157 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 SUPERFAMILY SSF52540 197 369 1.05E-40 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.6E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.6E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.6E-10 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 PIRSF PIRSF006809 3 423 1.3E-150 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 Gene3D G3DSA:3.40.50.300 197 367 2.0E-40 T 12-10-2018 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 SUPERFAMILY SSF54980 365 428 8.63E-17 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 5.2E-28 T 12-10-2018 IPR032305 GTP-binding protein, middle domain vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 6.9E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 3.5E-156 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 vfu_A00014 4454bcbff45896417ec85ae542aa4fc5 429 Gene3D G3DSA:3.40.50.11060 18 138 7.8E-38 T 12-10-2018 vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 SUPERFAMILY SSF51735 1 166 2.03E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 1.9E-38 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 Gene3D G3DSA:1.10.1040.10 167 296 1.9E-43 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 2.8E-85 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 6.6E-30 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 Gene3D G3DSA:3.40.50.720 1 166 3.7E-50 T 12-10-2018 vfu_A02823 bdacd5965eabca687e88e181caab2b58 296 SUPERFAMILY SSF48179 168 290 9.18E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A01268 9df9415bb3ae326d38e512fc6c405dbb 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 2.0E-70 T 12-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 vfu_A01268 9df9415bb3ae326d38e512fc6c405dbb 184 Pfam PF08534 Redoxin 41 164 3.6E-25 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 vfu_A01268 9df9415bb3ae326d38e512fc6c405dbb 184 SUPERFAMILY SSF52833 46 178 4.13E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01268 9df9415bb3ae326d38e512fc6c405dbb 184 Gene3D G3DSA:3.40.30.10 19 184 1.1E-44 T 12-10-2018 vfu_A01268 9df9415bb3ae326d38e512fc6c405dbb 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 8.3E-62 T 12-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 12-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 6.3E-16 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 Gene3D G3DSA:3.10.20.30 1 112 4.6E-37 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 SUPERFAMILY SSF54292 4 107 3.05E-34 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 vfu_A02782 250ed94224d6d7453f4f1549ef9f1ef2 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 12-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 vfu_A02859 d63f8c7725e17dec2d3f264bb46f189d 406 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 17 60 3.6E-10 T 12-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal vfu_A02222 c644a0d4ae8176464924925a00f74426 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A02222 c644a0d4ae8176464924925a00f74426 396 Gene3D G3DSA:3.40.50.1100 53 383 4.0E-182 T 12-10-2018 vfu_A02222 c644a0d4ae8176464924925a00f74426 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 376 1.9E-51 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme vfu_A02222 c644a0d4ae8176464924925a00f74426 396 SUPERFAMILY SSF53686 5 389 2.36E-141 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_A02222 c644a0d4ae8176464924925a00f74426 396 PIRSF PIRSF001413 1 395 2.3E-166 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A02222 c644a0d4ae8176464924925a00f74426 396 Gene3D G3DSA:3.40.50.1100 9 204 4.0E-182 T 12-10-2018 vfu_A02222 c644a0d4ae8176464924925a00f74426 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.6E-193 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A02222 c644a0d4ae8176464924925a00f74426 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.392 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 5.9E-5 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 298 1.8E-9 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 SUPERFAMILY SSF52922 701 885 5.97E-58 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 PIRSF PIRSF000156 1 886 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 12-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 Gene3D G3DSA:3.40.50.920 706 886 4.4E-70 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 SUPERFAMILY SSF52518 475 700 1.65E-97 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 Gene3D G3DSA:3.40.50.970 55 471 2.4E-132 T 12-10-2018 vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 SUPERFAMILY SSF52518 56 469 6.95E-139 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00880 5232ea76e92eb1510b2fd51b856de761 886 Gene3D G3DSA:3.40.50.970 472 705 3.7E-110 T 12-10-2018 vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 Pfam PF07730 Histidine kinase 321 384 2.1E-12 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 Pfam PF05231 MASE1 9 286 6.5E-40 T 12-10-2018 IPR007895 MASE1 vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 4.2E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 4.2E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 4.2E-5 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 426 515 4.9E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 SMART SM00387 424 517 1.2E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 Gene3D G3DSA:3.30.565.10 388 515 5.9E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02457 612292f90b24d7132ac74a680bf0625c 521 SUPERFAMILY SSF55874 427 517 9.43E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 Gene3D G3DSA:3.40.50.970 296 497 9.3E-66 T 12-10-2018 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 137 271 1.5E-39 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 324 472 1.4E-47 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 Gene3D G3DSA:3.40.50.1220 129 293 2.8E-50 T 12-10-2018 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 361 380 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 SUPERFAMILY SSF52518 2 126 1.02E-38 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 115 2.9E-33 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 Gene3D G3DSA:3.40.50.970 1 124 8.1E-42 T 12-10-2018 vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 SUPERFAMILY SSF52467 129 290 6.55E-55 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 SUPERFAMILY SSF52518 307 494 4.65E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00288 a0160c8c008d01d0bec8280c71f2bf5b 497 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 2 495 3.7E-180 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 6.2E-155 T 12-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 PIRSF PIRSF005572 21 402 2.9E-55 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 Gene3D G3DSA:3.40.640.10 35 295 3.7E-162 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 Pfam PF00266 Aminotransferase class-V 24 392 3.5E-150 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 Gene3D G3DSA:3.90.1150.10 7 396 3.7E-162 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 3.2E-166 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 vfu_A02825 ce9354d2f36b574fbaea46638241b171 403 SUPERFAMILY SSF53383 3 400 5.78E-125 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 Gene3D G3DSA:1.10.10.10 4 59 1.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 SUPERFAMILY SSF54909 69 154 5.09E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 1.4E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 1.4E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 1.4E-10 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 8.8E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 SUPERFAMILY SSF46785 7 68 6.39E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 Gene3D G3DSA:3.30.70.920 60 142 7.9E-32 T 12-10-2018 vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 SMART SM00344 8 115 2.9E-41 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_A00386 365e15ecb8e5f582ab7dce1703ecbeae 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 2.5E-16 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_A01621 5671c38dfee4f276386b22d7f1e5bb6a 187 SUPERFAMILY SSF159894 2 94 2.41E-29 T 12-10-2018 vfu_A01621 5671c38dfee4f276386b22d7f1e5bb6a 187 Gene3D G3DSA:1.10.150.20 106 187 4.0E-24 T 12-10-2018 vfu_A01621 5671c38dfee4f276386b22d7f1e5bb6a 187 Pfam PF04994 TfoX C-terminal domain 106 185 2.7E-32 T 12-10-2018 IPR007077 TfoX, C-terminal vfu_A01621 5671c38dfee4f276386b22d7f1e5bb6a 187 Gene3D G3DSA:3.30.1460.30 1 96 2.3E-33 T 12-10-2018 vfu_A01621 5671c38dfee4f276386b22d7f1e5bb6a 187 Pfam PF04993 TfoX N-terminal domain 3 92 1.8E-29 T 12-10-2018 IPR007076 TfoX, N-terminal vfu_A01621 5671c38dfee4f276386b22d7f1e5bb6a 187 PIRSF PIRSF028788 1 187 9.4E-47 T 12-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 Gene3D G3DSA:3.30.70.360 174 286 4.5E-89 T 12-10-2018 vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 SUPERFAMILY SSF55031 177 284 2.09E-16 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 Pfam PF01546 Peptidase family M20/M25/M40 66 371 1.4E-18 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 Gene3D G3DSA:3.40.630.10 8 357 4.5E-89 T 12-10-2018 vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 SUPERFAMILY SSF53187 7 372 9.24E-58 T 12-10-2018 vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 PIRSF PIRSF005962 2 375 5.0E-92 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 358 1.8E-58 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 vfu_B01137 5572d1d4d6e7df806ad3ffdac2eab5ba 376 Pfam PF07687 Peptidase dimerisation domain 178 271 3.0E-7 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_A02071 87ddf3b86cae0d2e807e422c238146df 324 Gene3D G3DSA:2.40.30.170 33 321 6.8E-32 T 12-10-2018 vfu_A02071 87ddf3b86cae0d2e807e422c238146df 324 Gene3D G3DSA:1.10.287.470 76 205 6.8E-32 T 12-10-2018 vfu_A02071 87ddf3b86cae0d2e807e422c238146df 324 Gene3D G3DSA:2.40.50.100 42 240 6.8E-32 T 12-10-2018 vfu_A02071 87ddf3b86cae0d2e807e422c238146df 324 Pfam PF13437 HlyD family secretion protein 206 282 1.5E-5 T 12-10-2018 vfu_A02071 87ddf3b86cae0d2e807e422c238146df 324 SUPERFAMILY SSF111369 40 269 3.14E-7 T 12-10-2018 vfu_A02071 87ddf3b86cae0d2e807e422c238146df 324 Pfam PF13533 Biotin-lipoyl like 45 88 1.9E-13 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_B00661 9fc1277a6116ed0c20ce1287d54601f2 292 SUPERFAMILY SSF53850 94 289 2.17E-22 T 12-10-2018 vfu_B00661 9fc1277a6116ed0c20ce1287d54601f2 292 SUPERFAMILY SSF46785 1 87 2.39E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00661 9fc1277a6116ed0c20ce1287d54601f2 292 Pfam PF03466 LysR substrate binding domain 104 285 1.7E-15 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00661 9fc1277a6116ed0c20ce1287d54601f2 292 Gene3D G3DSA:3.40.190.290 92 283 2.5E-37 T 12-10-2018 vfu_B00661 9fc1277a6116ed0c20ce1287d54601f2 292 Gene3D G3DSA:1.10.10.10 1 91 3.2E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00661 9fc1277a6116ed0c20ce1287d54601f2 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02062 35468825977f765eb9b4d3245ff0e7ed 201 Pfam PF13187 4Fe-4S dicluster domain 82 171 9.6E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A02062 35468825977f765eb9b4d3245ff0e7ed 201 Gene3D G3DSA:3.30.70.20 2 76 1.3E-10 T 12-10-2018 vfu_A02062 35468825977f765eb9b4d3245ff0e7ed 201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02062 35468825977f765eb9b4d3245ff0e7ed 201 SUPERFAMILY SSF54862 3 177 3.01E-40 T 12-10-2018 vfu_A02062 35468825977f765eb9b4d3245ff0e7ed 201 Gene3D G3DSA:3.30.70.20 77 200 5.5E-13 T 12-10-2018 vfu_A00676 e8e764d1406227e555953c375f914102 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00676 e8e764d1406227e555953c375f914102 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.023 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00676 e8e764d1406227e555953c375f914102 84 SUPERFAMILY SSF50249 5 83 4.28E-34 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00676 e8e764d1406227e555953c375f914102 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 7.0E-36 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00676 e8e764d1406227e555953c375f914102 84 Pfam PF00366 Ribosomal protein S17 10 77 1.7E-34 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00676 e8e764d1406227e555953c375f914102 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 3.8E-38 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00676 e8e764d1406227e555953c375f914102 84 Gene3D G3DSA:2.40.50.140 1 84 2.5E-38 T 12-10-2018 vfu_A00676 e8e764d1406227e555953c375f914102 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 2.0E-14 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00676 e8e764d1406227e555953c375f914102 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 2.0E-14 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00676 e8e764d1406227e555953c375f914102 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 2.0E-14 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_B01076 043d441a29396254cbd19960613ec06c 459 Pfam PF07670 Nucleoside recognition 145 238 1.2E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_B01378 02772e63786493f0c42bb0c84811c3ec 229 Pfam PF00226 DnaJ domain 182 227 1.2E-9 T 12-10-2018 IPR001623 DnaJ domain vfu_B01378 02772e63786493f0c42bb0c84811c3ec 229 SUPERFAMILY SSF46565 175 227 3.01E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_B01378 02772e63786493f0c42bb0c84811c3ec 229 Gene3D G3DSA:1.10.287.110 167 229 2.5E-11 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_B01378 02772e63786493f0c42bb0c84811c3ec 229 SMART SM00271 175 229 2.9E-7 T 12-10-2018 IPR001623 DnaJ domain vfu_B01378 02772e63786493f0c42bb0c84811c3ec 229 Pfam PF12339 DNA-J related protein 39 160 3.1E-40 T 12-10-2018 IPR021059 DnaJ-related protein, N-terminal vfu_A00605 493e0df50a505428a426321c8e195b3e 157 Pfam PF02308 MgtC family 18 140 4.7E-31 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 vfu_A00605 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 40 58 5.5E-33 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 vfu_A00605 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 94 118 5.5E-33 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 vfu_A00605 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 67 89 5.5E-33 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 vfu_A00605 493e0df50a505428a426321c8e195b3e 157 PRINTS PR01837 MgtC/SapB protein signature 21 40 5.5E-33 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 vfu_B00982 986fec404a070d535d644e4fc52f6a19 176 Gene3D G3DSA:2.40.50.180 50 161 1.1E-31 T 12-10-2018 vfu_B00982 986fec404a070d535d644e4fc52f6a19 176 Gene3D G3DSA:2.30.30.40 34 160 1.1E-31 T 12-10-2018 vfu_B00982 986fec404a070d535d644e4fc52f6a19 176 Pfam PF01584 CheW-like domain 32 167 3.1E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_B00982 986fec404a070d535d644e4fc52f6a19 176 SUPERFAMILY SSF50341 30 168 1.44E-31 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_B00982 986fec404a070d535d644e4fc52f6a19 176 SMART SM00260 27 166 7.8E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SUPERFAMILY SSF47781 520 608 4.13E-19 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Gene3D G3DSA:3.30.420.340 379 551 2.5E-45 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF14520 Helix-hairpin-helix domain 557 608 6.3E-9 T 12-10-2018 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 541 3.2E-43 T 12-10-2018 IPR001162 UvrC family homology region vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SUPERFAMILY SSF46600 189 242 2.75E-12 T 12-10-2018 IPR036876 UVR domain superfamily vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 588 1.6E-212 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SUPERFAMILY SSF82771 15 99 1.14E-23 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Gene3D G3DSA:1.10.150.20 554 609 1.3E-24 T 12-10-2018 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF01541 GIY-YIG catalytic domain 17 92 1.5E-13 T 12-10-2018 IPR000305 GIY-YIG endonuclease vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Gene3D G3DSA:3.40.1440.10 5 101 2.0E-31 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SMART SM00465 16 97 9.4E-24 T 12-10-2018 IPR000305 GIY-YIG endonuclease vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Pfam PF02151 UvrB/uvrC motif 204 237 1.8E-5 T 12-10-2018 IPR001943 UVR domain GO:0005515 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 606 28.321 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SMART SM00278 555 574 0.24 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02142 20078d6d1ca4d38e95474a8d4c5c3bd3 609 SMART SM00278 587 606 510.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02786 48ef9d1ed675c4741bf9798aceccda2e 127 Gene3D G3DSA:3.90.1010.10 1 127 1.3E-58 T 12-10-2018 vfu_A02786 48ef9d1ed675c4741bf9798aceccda2e 127 Pfam PF01592 NifU-like N terminal domain 2 125 6.9E-57 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 vfu_A02786 48ef9d1ed675c4741bf9798aceccda2e 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 7.1E-69 T 12-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 vfu_A02786 48ef9d1ed675c4741bf9798aceccda2e 127 SUPERFAMILY SSF82649 1 125 1.05E-47 T 12-10-2018 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 Gene3D G3DSA:1.10.3660.10 248 373 1.2E-46 T 12-10-2018 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 Gene3D G3DSA:3.40.50.720 81 247 7.2E-44 T 12-10-2018 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 Gene3D G3DSA:1.20.59.10 1 80 6.9E-18 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 SUPERFAMILY SSF51735 91 237 6.69E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 SUPERFAMILY SSF48179 241 366 1.59E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 Pfam PF02153 Prephenate dehydrogenase 134 344 2.7E-31 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 SUPERFAMILY SSF48600 3 87 9.89E-24 T 12-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 SMART SM00830 9 89 3.0E-29 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 PIRSF PIRSF001499 1 374 7.4E-177 T 12-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 Pfam PF01817 Chorismate mutase type II 9 87 3.0E-21 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 vfu_A00994 6f840a36d0640cedc48ea0f19addd572 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.0E-40 T 12-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 Gene3D G3DSA:1.20.120.220 92 268 5.9E-66 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 Pfam PF00119 ATP synthase A chain 44 262 2.9E-57 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 5.2E-44 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.562 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 SUPERFAMILY SSF81336 93 262 7.98E-50 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 3.6E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 3.6E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00344 f4955ddd770326f66d862645d81fa83f 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 3.6E-14 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A03120 e7f289fa1a2cad0246ba222409adc766 177 Gene3D G3DSA:2.40.50.140 2 148 6.7E-51 T 12-10-2018 vfu_A03120 e7f289fa1a2cad0246ba222409adc766 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 9.9E-62 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 vfu_A03120 e7f289fa1a2cad0246ba222409adc766 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.198 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 vfu_A03120 e7f289fa1a2cad0246ba222409adc766 177 Pfam PF00436 Single-strand binding protein family 6 113 8.8E-43 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 vfu_A03120 e7f289fa1a2cad0246ba222409adc766 177 SUPERFAMILY SSF50249 4 177 4.11E-61 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A03120 e7f289fa1a2cad0246ba222409adc766 177 PIRSF PIRSF002070 2 172 7.5E-35 T 12-10-2018 vfu_A00483 ae3c4cd78635e083244c495bf387557d 213 SUPERFAMILY SSF46689 7 80 3.78E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00483 ae3c4cd78635e083244c495bf387557d 213 Gene3D G3DSA:1.10.357.10 56 209 1.1E-34 T 12-10-2018 vfu_A00483 ae3c4cd78635e083244c495bf387557d 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00483 ae3c4cd78635e083244c495bf387557d 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site vfu_A00483 ae3c4cd78635e083244c495bf387557d 213 Gene3D G3DSA:1.10.10.60 4 55 2.9E-23 T 12-10-2018 vfu_A00388 47939275c56ece22cd102c30868cfbbb 262 Gene3D G3DSA:3.40.50.150 57 261 1.4E-73 T 12-10-2018 vfu_A00388 47939275c56ece22cd102c30868cfbbb 262 Gene3D G3DSA:3.40.1630.10 1 56 7.9E-19 T 12-10-2018 vfu_A00388 47939275c56ece22cd102c30868cfbbb 262 SUPERFAMILY SSF53335 10 255 1.79E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00388 47939275c56ece22cd102c30868cfbbb 262 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 38.317 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 vfu_A00388 47939275c56ece22cd102c30868cfbbb 262 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 3.5E-106 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 vfu_A02344 a4092abe1cd6a892eebf6580e6c7c9c3 147 TIGRFAM TIGR02801 tolR: protein TolR 12 144 6.0E-38 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 vfu_A02344 a4092abe1cd6a892eebf6580e6c7c9c3 147 Gene3D G3DSA:3.30.420.270 64 136 1.5E-17 T 12-10-2018 vfu_A02344 a4092abe1cd6a892eebf6580e6c7c9c3 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 28.3 T 12-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 vfu_A02344 a4092abe1cd6a892eebf6580e6c7c9c3 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 6.4E-26 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 vfu_B00311 bf915243b7e941d54b9da59694c172a2 101 Gene3D G3DSA:3.30.70.920 6 75 4.6E-22 T 12-10-2018 vfu_B00311 bf915243b7e941d54b9da59694c172a2 101 Hamap MF_02200 Chaperone NapD [napD]. 6 82 19.041 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly vfu_B00311 bf915243b7e941d54b9da59694c172a2 101 Pfam PF03927 NapD protein 6 80 9.5E-29 T 12-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly vfu_A02800 9760c16301d4131d0914bb732e717abd 545 Pfam PF01274 Malate synthase 24 544 6.3E-200 T 12-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_A02800 9760c16301d4131d0914bb732e717abd 545 PIRSF PIRSF001363 14 545 2.1E-250 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_A02800 9760c16301d4131d0914bb732e717abd 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 1.4E-264 T 12-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_A02800 9760c16301d4131d0914bb732e717abd 545 SUPERFAMILY SSF51645 19 544 1.15E-188 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_A02800 9760c16301d4131d0914bb732e717abd 545 Gene3D G3DSA:3.20.20.360 15 423 6.7E-188 T 12-10-2018 vfu_A02800 9760c16301d4131d0914bb732e717abd 545 Gene3D G3DSA:1.20.1220.12 424 545 8.1E-50 T 12-10-2018 vfu_A02800 9760c16301d4131d0914bb732e717abd 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 12-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_B00393 ca8fee6442edafacec4df604ac2d47cd 318 Pfam PF04860 Phage portal protein 76 298 7.1E-12 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein vfu_B00393 ca8fee6442edafacec4df604ac2d47cd 318 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 30 303 1.1E-50 T 12-10-2018 IPR006430 Phage portal protein PBSX family vfu_B00208 b71e065373dff9b3792955d5257497e9 52 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 29 8.0E-8 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 vfu_B00208 b71e065373dff9b3792955d5257497e9 52 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 52 16.86 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 vfu_B00208 b71e065373dff9b3792955d5257497e9 52 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 7.8E-25 T 12-10-2018 IPR005371 Uncharacterised protein family UPF0181 vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 Pfam PF01497 Periplasmic binding protein 47 276 2.3E-21 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 283 296 2.1E-7 T 12-10-2018 vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 63 81 2.1E-7 T 12-10-2018 vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 94 109 2.1E-7 T 12-10-2018 vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 SUPERFAMILY SSF53807 27 299 4.32E-48 T 12-10-2018 vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 Gene3D G3DSA:3.40.50.1980 32 129 2.6E-27 T 12-10-2018 vfu_A00213 1d6fc0bca799a3677a7867d6caac0e66 309 Gene3D G3DSA:3.40.50.1980 132 304 3.1E-45 T 12-10-2018 vfu_A00440 9907d5431315943577f6e77492883ab3 234 Pfam PF04340 Protein of unknown function, DUF484 6 222 3.9E-73 T 12-10-2018 IPR007435 Protein of unknown function DUF484 vfu_A00440 9907d5431315943577f6e77492883ab3 234 Gene3D G3DSA:3.30.450.40 44 219 1.1E-35 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B00335 bd1825b9afa4219909784a39285fd775 332 Gene3D G3DSA:3.40.50.2300 138 324 9.5E-109 T 12-10-2018 vfu_B00335 bd1825b9afa4219909784a39285fd775 332 Gene3D G3DSA:3.40.50.2300 31 300 9.5E-109 T 12-10-2018 vfu_B00335 bd1825b9afa4219909784a39285fd775 332 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 30 328 2.7E-133 T 12-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT vfu_B00335 bd1825b9afa4219909784a39285fd775 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 29 318 2.9E-31 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_B00335 bd1825b9afa4219909784a39285fd775 332 SUPERFAMILY SSF53822 30 294 6.85E-31 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A03011 7973a6a502b4edcfe42fd46a618b1c14 60 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 29 49 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site vfu_A02826 769135ec3c05b0c55997baa6add8a9f7 143 Gene3D G3DSA:3.90.1010.10 1 143 3.4E-50 T 12-10-2018 vfu_A02826 769135ec3c05b0c55997baa6add8a9f7 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 140 7.6E-45 T 12-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE vfu_A02826 769135ec3c05b0c55997baa6add8a9f7 143 SUPERFAMILY SSF82649 4 141 6.8E-48 T 12-10-2018 vfu_A02826 769135ec3c05b0c55997baa6add8a9f7 143 Pfam PF02657 Fe-S metabolism associated domain 21 139 5.3E-45 T 12-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Gene3D G3DSA:1.10.287.130 184 295 1.6E-6 T 12-10-2018 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 45 140 5.3E-24 T 12-10-2018 IPR029095 NarX-like, N-terminal vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 PIRSF PIRSF003167 10 321 3.4E-78 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 PIRSF PIRSF003167 311 585 4.9E-101 T 12-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 SMART SM00304 187 239 3.0E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Pfam PF00672 HAMP domain 189 234 8.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 SUPERFAMILY SSF55874 454 572 6.02E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Gene3D G3DSA:1.20.120.960 51 159 1.1E-12 T 12-10-2018 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Gene3D G3DSA:3.30.565.10 446 581 9.2E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 SUPERFAMILY SSF158472 189 236 8.5E-8 T 12-10-2018 vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 573 2.2E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 SMART SM00387 485 576 4.8E-12 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00309 61f5ed1ba6e8a10c917d2f893bff6493 585 Pfam PF07730 Histidine kinase 376 444 9.3E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.4E-77 T 12-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.324 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PIRSF PIRSF000904 1 335 2.0E-126 T 12-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 SUPERFAMILY SSF56655 3 331 2.49E-114 T 12-10-2018 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 Gene3D G3DSA:3.30.540.10 4 198 2.2E-77 T 12-10-2018 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.1E-76 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.1E-76 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.1E-76 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.1E-76 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.1E-76 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.1E-76 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 Gene3D G3DSA:3.40.190.80 200 336 8.5E-61 T 12-10-2018 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 PIRSF PIRSF500210 1 335 5.7E-129 T 12-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A00720 1830eea68ecf61b515f5d76e7c756132 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 12-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 SUPERFAMILY SSF51445 14 371 9.64E-110 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Gene3D G3DSA:3.20.20.80 4 398 8.9E-132 T 12-10-2018 vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 SUPERFAMILY SSF52317 400 618 2.9E-57 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Gene3D G3DSA:2.60.40.1180 627 688 4.4E-8 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 PIRSF PIRSF001084 7 687 5.6E-230 T 12-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Pfam PF08532 Beta-galactosidase trimerisation domain 402 617 1.5E-64 T 12-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Gene3D G3DSA:3.40.50.880 400 625 1.1E-64 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02089 0fdb8e4ebb1bc516f8a5fc1c82187afe 688 Pfam PF02449 Beta-galactosidase 19 390 4.8E-148 T 12-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 Gene3D G3DSA:3.40.50.2300 45 289 7.0E-62 T 12-10-2018 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 Gene3D G3DSA:1.10.260.40 1 39 1.7E-7 T 12-10-2018 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 Pfam PF13377 Periplasmic binding protein-like domain 150 308 7.5E-28 T 12-10-2018 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 SUPERFAMILY SSF47413 1 40 6.38E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 SMART SM00354 1 51 3.1E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 Gene3D G3DSA:3.40.50.2300 144 266 7.0E-62 T 12-10-2018 vfu_A01506 bfc9d7dbc500124d8e2818d57c38badf 308 SUPERFAMILY SSF53822 38 298 2.36E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B00936 f838417eb82df8dde501b8f87859a943 311 SUPERFAMILY SSF46689 260 309 5.38E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00936 f838417eb82df8dde501b8f87859a943 311 SUPERFAMILY SSF46689 208 257 2.47E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00936 f838417eb82df8dde501b8f87859a943 311 SUPERFAMILY SSF52317 1 190 1.43E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00936 f838417eb82df8dde501b8f87859a943 311 Pfam PF01965 DJ-1/PfpI family 3 169 4.9E-14 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 vfu_B00936 f838417eb82df8dde501b8f87859a943 311 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 260 302 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00936 f838417eb82df8dde501b8f87859a943 311 Gene3D G3DSA:3.40.50.880 1 203 5.9E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00936 f838417eb82df8dde501b8f87859a943 311 Gene3D G3DSA:1.10.10.60 207 310 3.3E-27 T 12-10-2018 vfu_B00936 f838417eb82df8dde501b8f87859a943 311 SMART SM00342 223 306 8.0E-27 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00936 f838417eb82df8dde501b8f87859a943 311 Pfam PF12833 Helix-turn-helix domain 229 307 3.8E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00171 c6712d5b7b8f06b1498e376d117abc5a 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 2.3E-47 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00171 c6712d5b7b8f06b1498e376d117abc5a 263 Gene3D G3DSA:3.40.190.10 28 245 1.1E-52 T 12-10-2018 vfu_B00171 c6712d5b7b8f06b1498e376d117abc5a 263 SMART SM00062 36 256 9.7E-37 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00171 c6712d5b7b8f06b1498e376d117abc5a 263 SUPERFAMILY SSF53850 10 255 5.22E-53 T 12-10-2018 vfu_B00171 c6712d5b7b8f06b1498e376d117abc5a 263 Gene3D G3DSA:3.40.190.10 123 214 1.1E-52 T 12-10-2018 vfu_A02002 37d64a18efab1eaab3b72c5e0bb2a6d1 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.681 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 vfu_A02002 37d64a18efab1eaab3b72c5e0bb2a6d1 229 SUPERFAMILY SSF52402 1 211 1.39E-68 T 12-10-2018 vfu_A02002 37d64a18efab1eaab3b72c5e0bb2a6d1 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 1.1E-84 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 vfu_A02002 37d64a18efab1eaab3b72c5e0bb2a6d1 229 Gene3D G3DSA:3.40.50.620 1 229 2.4E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02002 37d64a18efab1eaab3b72c5e0bb2a6d1 229 PIRSF PIRSF006293 1 224 9.6E-83 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 vfu_A02002 37d64a18efab1eaab3b72c5e0bb2a6d1 229 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 7.5E-86 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 vfu_A02570 9991a9f9c119f79d2f7dbdd5d175976b 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 3.6E-111 T 12-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 vfu_A02570 9991a9f9c119f79d2f7dbdd5d175976b 253 Pfam PF01048 Phosphorylase superfamily 20 250 3.8E-39 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 vfu_A02570 9991a9f9c119f79d2f7dbdd5d175976b 253 SUPERFAMILY SSF53167 6 249 9.03E-72 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 vfu_A02570 9991a9f9c119f79d2f7dbdd5d175976b 253 Gene3D G3DSA:3.40.50.1580 1 253 8.1E-81 T 12-10-2018 vfu_A02570 9991a9f9c119f79d2f7dbdd5d175976b 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 SMART SM00849 397 580 3.0E-11 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 Pfam PF03772 Competence protein 105 358 3.3E-56 T 12-10-2018 IPR004477 ComEC/Rec2-related protein vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 Gene3D G3DSA:3.60.15.10 385 624 4.4E-48 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 127 299 1.5E-31 T 12-10-2018 IPR004477 ComEC/Rec2-related protein vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 SUPERFAMILY SSF56281 385 624 8.68E-42 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 Pfam PF00753 Metallo-beta-lactamase superfamily 395 574 7.5E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A02389 9e14d3d52ddbe745ceb88bc7e96d7109 643 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 25 609 9.5E-128 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 vfu_A02493 235402b12eb5a6772d38646ab6743494 302 SUPERFAMILY SSF50494 10 195 4.27E-12 T 12-10-2018 IPR009003 Peptidase S1, PA clan vfu_A02493 235402b12eb5a6772d38646ab6743494 302 Gene3D G3DSA:2.40.10.10 44 121 5.6E-8 T 12-10-2018 vfu_A02493 235402b12eb5a6772d38646ab6743494 302 Gene3D G3DSA:3.10.450.50 260 301 2.0E-5 T 12-10-2018 vfu_A02493 235402b12eb5a6772d38646ab6743494 302 Gene3D G3DSA:2.40.10.10 122 200 5.6E-8 T 12-10-2018 vfu_A02493 235402b12eb5a6772d38646ab6743494 302 Pfam PF13365 Trypsin-like peptidase domain 26 194 3.3E-7 T 12-10-2018 vfu_A02493 235402b12eb5a6772d38646ab6743494 302 Pfam PF02810 SEC-C motif 284 299 3.3E-8 T 12-10-2018 IPR004027 SEC-C motif vfu_A02493 235402b12eb5a6772d38646ab6743494 302 SUPERFAMILY SSF103642 280 300 6.05E-6 T 12-10-2018 vfu_B00032 2e1aa309450438001f47f9d72343773d 65 SUPERFAMILY SSF52402 2 58 4.19E-11 T 12-10-2018 vfu_B00032 2e1aa309450438001f47f9d72343773d 65 Gene3D G3DSA:3.40.50.620 1 64 4.5E-12 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B00032 2e1aa309450438001f47f9d72343773d 65 Pfam PF00582 Universal stress protein family 2 56 1.2E-9 T 12-10-2018 IPR006016 UspA vfu_A02742 77eee3596838b531a5f9f70292129cda 298 Gene3D G3DSA:3.40.190.10 162 266 2.8E-48 T 12-10-2018 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 SUPERFAMILY SSF53850 92 292 1.41E-29 T 12-10-2018 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 Gene3D G3DSA:3.40.190.10 102 289 2.8E-48 T 12-10-2018 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 Gene3D G3DSA:1.10.10.10 5 97 1.8E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02742 77eee3596838b531a5f9f70292129cda 298 SUPERFAMILY SSF46785 6 113 1.72E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02742 77eee3596838b531a5f9f70292129cda 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 7.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 7.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 7.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 9.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02742 77eee3596838b531a5f9f70292129cda 298 Pfam PF03466 LysR substrate binding domain 90 292 6.6E-27 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 Gene3D G3DSA:2.30.42.10 237 321 1.9E-11 T 12-10-2018 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 SUPERFAMILY SSF50156 218 338 1.56E-14 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 664 6.1E-41 T 12-10-2018 IPR020992 Tail specific protease, C-terminal vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF03572 Peptidase family S41 357 526 8.3E-52 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 SMART SM00228 247 324 1.4E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF08180 B melanoma antigen family 9 37 1.0E-10 T 12-10-2018 IPR012530 B melanoma antigen-like vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 SMART SM00245 327 528 2.0E-67 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 Gene3D G3DSA:3.90.226.10 325 544 9.2E-59 T 12-10-2018 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 SUPERFAMILY SSF52096 167 532 5.47E-72 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 7.7E-114 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 vfu_A01936 c81edef555ac7ae91f092da34669e1a4 667 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 4.1E-13 T 12-10-2018 IPR001478 PDZ domain GO:0005515 vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:3.30.565.10 491 645 2.1E-35 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF52172 4 138 4.64E-5 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 533 642 2.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 SMART SM00387 530 643 2.0E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 640 1.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 621 1.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 PRINTS PR00344 Bacterial sensor protein C-terminal signature 571 585 1.1E-7 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF55874 482 641 1.31E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:2.60.120.10 177 318 4.3E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 380 4.3E-7 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 8.4E-17 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF51206 202 312 3.67E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 Gene3D G3DSA:3.40.50.2300 4 152 2.2E-6 T 12-10-2018 vfu_A02297 9993e0828c6c1d56c7b788bf5ae6fe37 647 SUPERFAMILY SSF47384 335 376 7.26E-7 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B00472 e3b47387531e4e66ebcd22c9c873782c 338 PIRSF PIRSF000267 3 338 5.1E-88 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_B00472 e3b47387531e4e66ebcd22c9c873782c 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 8 217 3.0E-47 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_B00472 e3b47387531e4e66ebcd22c9c873782c 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 8 327 2.7E-95 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_B00678 4df1e8aa3a233b081be6b5f571cd29f4 67 Pfam PF03889 Domain of unknown function 21 58 1.6E-22 T 12-10-2018 IPR005589 Alternative ribosome-rescue factor A GO:0072344 vfu_B00651 42999996625b2d73225c17e3ef28d0aa 661 Gene3D G3DSA:3.40.50.12780 75 530 1.1E-54 T 12-10-2018 vfu_B00651 42999996625b2d73225c17e3ef28d0aa 661 Gene3D G3DSA:3.30.300.30 534 658 1.2E-15 T 12-10-2018 vfu_B00651 42999996625b2d73225c17e3ef28d0aa 661 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 5 658 2.9E-239 T 12-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 vfu_B00651 42999996625b2d73225c17e3ef28d0aa 661 SUPERFAMILY SSF56801 32 649 6.28E-119 T 12-10-2018 vfu_B00651 42999996625b2d73225c17e3ef28d0aa 661 Pfam PF00501 AMP-binding enzyme 104 534 2.5E-44 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_B00651 42999996625b2d73225c17e3ef28d0aa 661 ProSitePatterns PS00455 Putative AMP-binding domain signature. 279 290 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A01732 0451bc79e4a8c86141fefc5beabd0289 165 Pfam PF01202 Shikimate kinase 12 161 8.8E-18 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 vfu_A01732 0451bc79e4a8c86141fefc5beabd0289 165 SUPERFAMILY SSF52540 1 162 1.35E-24 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01732 0451bc79e4a8c86141fefc5beabd0289 165 PRINTS PR01100 Shikimate kinase family signature 96 113 1.8E-6 T 12-10-2018 vfu_A01732 0451bc79e4a8c86141fefc5beabd0289 165 PRINTS PR01100 Shikimate kinase family signature 6 21 1.8E-6 T 12-10-2018 vfu_A01732 0451bc79e4a8c86141fefc5beabd0289 165 Gene3D G3DSA:3.40.50.300 1 165 2.3E-56 T 12-10-2018 vfu_A01732 0451bc79e4a8c86141fefc5beabd0289 165 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 160 6.6E-53 T 12-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 Gene3D G3DSA:3.30.9.10 94 332 2.5E-138 T 12-10-2018 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 Pfam PF01266 FAD dependent oxidoreductase 17 335 5.5E-46 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 364 374 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 359 371 2.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 90 102 2.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 325 331 2.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 29 39 2.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 16 28 2.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 45 57 2.8E-29 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 SUPERFAMILY SSF51905 17 334 7.96E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00296 fa79e8d480224db28a18d655604273fa 516 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 Gene3D G3DSA:3.50.50.60 17 378 2.5E-138 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00296 fa79e8d480224db28a18d655604273fa 516 Gene3D G3DSA:1.10.8.870 406 471 7.5E-20 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 392 501 5.0E-12 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 vfu_B00296 fa79e8d480224db28a18d655604273fa 516 SUPERFAMILY SSF54373 238 331 6.28E-6 T 12-10-2018 vfu_B00271 0213c1bc5bbad861e1b1af4d354144b7 1013 Pfam PF13476 AAA domain 5 297 1.1E-24 T 12-10-2018 IPR038729 Rad50/SbcC-type AAA domain vfu_B00271 0213c1bc5bbad861e1b1af4d354144b7 1013 Gene3D G3DSA:3.40.50.300 705 1005 8.5E-24 T 12-10-2018 vfu_B00271 0213c1bc5bbad861e1b1af4d354144b7 1013 Pfam PF13558 Putative exonuclease SbcCD, C subunit 906 972 1.7E-11 T 12-10-2018 vfu_B00271 0213c1bc5bbad861e1b1af4d354144b7 1013 SUPERFAMILY SSF52540 1 1008 6.86E-34 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00271 0213c1bc5bbad861e1b1af4d354144b7 1013 Gene3D G3DSA:3.40.50.300 1 321 1.5E-41 T 12-10-2018 vfu_B00840 82e7f99839f56ce091a8015d9b955efb 288 SUPERFAMILY SSF53807 14 282 1.65E-61 T 12-10-2018 vfu_B00840 82e7f99839f56ce091a8015d9b955efb 288 Gene3D G3DSA:3.40.50.1980 120 288 3.2E-49 T 12-10-2018 vfu_B00840 82e7f99839f56ce091a8015d9b955efb 288 Gene3D G3DSA:3.40.50.1980 8 117 5.9E-31 T 12-10-2018 vfu_B00840 82e7f99839f56ce091a8015d9b955efb 288 Pfam PF01497 Periplasmic binding protein 32 262 4.3E-28 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 Gene3D G3DSA:1.10.1040.10 163 291 1.1E-35 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 SUPERFAMILY SSF51735 1 163 1.51E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 9.6E-30 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 Gene3D G3DSA:3.40.50.720 1 162 1.1E-50 T 12-10-2018 vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 SUPERFAMILY SSF48179 163 289 7.03E-37 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 2.0E-47 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 PIRSF PIRSF000103 1 291 3.2E-72 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 vfu_B00997 cda2c7319180c7a5304d8fbaa7e1f5b4 291 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 vfu_A02061 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 1.6E-7 T 12-10-2018 vfu_A02061 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 235 261 1.6E-7 T 12-10-2018 vfu_A02061 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 305 317 1.6E-7 T 12-10-2018 vfu_A02061 d92fe77df70c2459709d0c8d9359794b 643 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 234 1.6E-7 T 12-10-2018 vfu_A02061 d92fe77df70c2459709d0c8d9359794b 643 Pfam PF00361 Proton-conducting membrane transporter 127 417 1.3E-44 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 Gene3D G3DSA:2.70.50.50 66 259 1.7E-64 T 12-10-2018 vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 SUPERFAMILY SSF81296 66 257 6.58E-48 T 12-10-2018 IPR014756 Immunoglobulin E-set vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 66 254 7.6E-39 T 12-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 SUPERFAMILY SSF51055 378 426 6.02E-15 T 12-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 Gene3D G3DSA:2.10.10.20 385 429 1.8E-20 T 12-10-2018 vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 SMART SM00495 386 429 2.7E-12 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B01209 745dd3f65b371bc240c8d0849e0a32d5 429 Pfam PF02839 Carbohydrate binding domain 403 428 9.2E-5 T 12-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 vfu_B00900 6d85b1d131e430dd0e8d9d76976b135e 260 Gene3D G3DSA:3.40.630.30 31 253 1.5E-20 T 12-10-2018 vfu_B00900 6d85b1d131e430dd0e8d9d76976b135e 260 SUPERFAMILY SSF55729 85 250 1.44E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 2.6E-266 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 Gene3D G3DSA:1.10.8.540 507 594 4.3E-22 T 12-10-2018 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 12-10-2018 IPR025505 FHIPEP conserved site vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 Gene3D G3DSA:3.40.30.60 363 506 5.1E-54 T 12-10-2018 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 Pfam PF00771 FHIPEP family 32 687 2.5E-268 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 Gene3D G3DSA:1.10.490.80 598 695 8.7E-15 T 12-10-2018 vfu_A01250 0711be61b217ec83f208deb17d4df6fe 697 PIRSF PIRSF005419 10 697 1.8E-251 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 SUPERFAMILY SSF51735 125 304 2.58E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 Gene3D G3DSA:3.40.50.720 128 309 5.9E-129 T 12-10-2018 vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 Pfam PF16884 N-terminal domain of oxidoreductase 8 113 4.6E-41 T 12-10-2018 vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 Gene3D G3DSA:3.90.180.10 17 337 5.9E-129 T 12-10-2018 vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 SMART SM00829 20 337 6.0E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 SUPERFAMILY SSF50129 5 144 7.86E-43 T 12-10-2018 IPR011032 GroES-like superfamily vfu_B01164 1ddad8583ccaf762ece362eb9d24fd7f 344 Pfam PF00107 Zinc-binding dehydrogenase 159 297 3.7E-19 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 Gene3D G3DSA:2.170.130.10 24 152 1.1E-37 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 608 34.378 T 12-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 Pfam PF00593 TonB dependent receptor 200 607 6.0E-40 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 12-10-2018 IPR010916 TonB box, conserved site vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 SUPERFAMILY SSF56935 29 608 3.92E-108 T 12-10-2018 vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 Gene3D G3DSA:2.40.170.20 154 608 1.9E-100 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A00486 c70b8b8720fdc309dcf5f1d35c9a232b 608 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 147 3.6E-29 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_B01176 5bbef886c835aff14c485ee514793513 169 PIRSF PIRSF028301 1 169 2.6E-61 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 vfu_B01176 5bbef886c835aff14c485ee514793513 169 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 157 2.2E-56 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 vfu_B01176 5bbef886c835aff14c485ee514793513 169 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 158 2.7E-57 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 24 59 7.3E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal vfu_A01669 cc1f17784147d5d762eac1a057637523 484 SUPERFAMILY SSF56024 90 313 3.36E-52 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 Pfam PF13091 PLD-like domain 134 267 1.1E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 Pfam PF13091 PLD-like domain 327 444 4.4E-25 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 SUPERFAMILY SSF56024 273 471 2.09E-45 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 PIRSF PIRSF000850 107 252 1.3 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 PIRSF PIRSF000850 383 465 0.18 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 PIRSF PIRSF000850 298 382 0.013 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.485 T 12-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 Gene3D G3DSA:3.30.870.10 304 482 3.2E-31 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 Gene3D G3DSA:3.30.870.10 115 303 3.6E-38 T 12-10-2018 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 SMART SM00155 397 424 2.7E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 SMART SM00155 219 246 9.2E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 vfu_A01669 cc1f17784147d5d762eac1a057637523 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 484 3.9E-154 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 vfu_A01862 6967ca4a5d29c92921fe57a347b415d6 135 SUPERFAMILY SSF54001 14 128 1.37E-39 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily vfu_A01862 6967ca4a5d29c92921fe57a347b415d6 135 Pfam PF00877 NlpC/P60 family 23 127 3.1E-30 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain vfu_A01862 6967ca4a5d29c92921fe57a347b415d6 135 Gene3D G3DSA:3.90.1720.10 8 131 2.5E-39 T 12-10-2018 vfu_A02471 6bc9cbc84e54a0d177a1727244563b4c 615 Gene3D G3DSA:1.10.1370.10 381 541 1.0E-16 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 vfu_A02471 6bc9cbc84e54a0d177a1727244563b4c 615 Gene3D G3DSA:1.10.1370.10 57 246 3.8E-6 T 12-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 vfu_A02471 6bc9cbc84e54a0d177a1727244563b4c 615 SUPERFAMILY SSF55486 3 550 2.77E-74 T 12-10-2018 vfu_A02471 6bc9cbc84e54a0d177a1727244563b4c 615 Pfam PF01432 Peptidase family M3 284 490 1.6E-13 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 vfu_A02471 6bc9cbc84e54a0d177a1727244563b4c 615 Gene3D G3DSA:3.40.390.10 283 380 1.0E-16 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 vfu_A00856 778b25721e0ddafa67cf0f7a93d871f4 294 Gene3D G3DSA:1.10.4050.10 4 113 1.5E-18 T 12-10-2018 vfu_A00856 778b25721e0ddafa67cf0f7a93d871f4 294 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 236 4.3E-73 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 vfu_A00856 778b25721e0ddafa67cf0f7a93d871f4 294 Gene3D G3DSA:3.30.460.10 116 245 3.3E-44 T 12-10-2018 vfu_A00856 778b25721e0ddafa67cf0f7a93d871f4 294 SUPERFAMILY SSF81301 26 235 1.04E-66 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 SUPERFAMILY SSF81593 5 154 2.98E-46 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Gene3D G3DSA:1.20.120.330 3 158 1.6E-57 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Gene3D G3DSA:3.30.460.100 280 529 1.0E-91 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 SUPERFAMILY SSF81301 243 533 2.88E-87 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 SUPERFAMILY SSF81593 533 661 1.26E-33 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Gene3D G3DSA:1.20.120.1510 166 279 6.3E-33 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 271 523 2.3E-97 T 12-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Gene3D G3DSA:1.20.120.330 530 662 1.3E-45 T 12-10-2018 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Pfam PF08335 GlnD PII-uridylyltransferase 15 154 3.3E-48 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 vfu_A00857 bd02fad86a927da49fd92ba1f512785b 662 Pfam PF08335 GlnD PII-uridylyltransferase 544 631 8.1E-8 T 12-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 vfu_A00669 63362a05b0ad8e4bfe385f32feb71e5e 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00669 63362a05b0ad8e4bfe385f32feb71e5e 100 Gene3D G3DSA:3.30.70.330 1 100 2.0E-38 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily vfu_A00669 63362a05b0ad8e4bfe385f32feb71e5e 100 SUPERFAMILY SSF54189 6 97 4.68E-32 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00669 63362a05b0ad8e4bfe385f32feb71e5e 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.67 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 vfu_A00669 63362a05b0ad8e4bfe385f32feb71e5e 100 Pfam PF00276 Ribosomal protein L23 9 95 1.3E-31 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 vfu_B00081 459457cda9a24252675763776d43ebe8 147 Pfam PF00583 Acetyltransferase (GNAT) family 27 133 3.7E-14 T 12-10-2018 IPR000182 GNAT domain vfu_B00081 459457cda9a24252675763776d43ebe8 147 Gene3D G3DSA:3.40.630.30 2 137 1.9E-35 T 12-10-2018 vfu_B00081 459457cda9a24252675763776d43ebe8 147 SUPERFAMILY SSF55729 1 142 2.06E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01926 86d7554184bda9f4ae2cddcd1af046fe 66 Gene3D G3DSA:3.40.30.10 1 66 3.5E-11 T 12-10-2018 vfu_A01926 86d7554184bda9f4ae2cddcd1af046fe 66 SUPERFAMILY SSF52833 1 60 7.16E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01926 86d7554184bda9f4ae2cddcd1af046fe 66 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 58 3.4E-10 T 12-10-2018 IPR008554 Glutaredoxin-like vfu_B01019 0d9278ae0821857f4a217cacba83d359 285 SUPERFAMILY SSF53474 24 285 1.13E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B01019 0d9278ae0821857f4a217cacba83d359 285 Pfam PF12146 Serine aminopeptidase, S33 83 183 7.8E-10 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 vfu_B01019 0d9278ae0821857f4a217cacba83d359 285 Gene3D G3DSA:3.40.50.1820 55 285 3.2E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 14 411 3.2E-192 T 12-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 Gene3D G3DSA:3.40.50.300 229 414 1.1E-85 T 12-10-2018 vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 Gene3D G3DSA:3.30.450.90 94 228 1.1E-55 T 12-10-2018 vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 SUPERFAMILY SSF160246 15 81 6.02E-16 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 Pfam PF00437 Type II/IV secretion system protein 130 395 2.4E-90 T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 SMART SM00382 256 379 1.5E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 Gene3D G3DSA:3.30.300.160 1 93 3.3E-37 T 12-10-2018 vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 SUPERFAMILY SSF52540 107 395 1.8E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00511 0d893bc1ee8f26181a3455865766d362 415 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 323 337 - T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 347 79.56 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 Gene3D G3DSA:3.30.43.10 1 72 1.0E-19 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 SUPERFAMILY SSF56194 206 340 1.24E-48 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 332 1.2E-89 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 Gene3D G3DSA:3.90.78.10 222 346 2.5E-45 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 SUPERFAMILY SSF56176 8 199 1.83E-41 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 330 9.2E-33 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 Pfam PF01565 FAD binding domain 23 142 2.9E-17 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 vfu_A00048 e3743a589b1f641490e58fbed33c92f9 347 Gene3D G3DSA:3.30.465.10 73 221 4.3E-50 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 vfu_A01843 b578181455026d663979bd5868b4df5c 430 SUPERFAMILY SSF53850 22 417 4.69E-71 T 12-10-2018 vfu_A01843 b578181455026d663979bd5868b4df5c 430 Gene3D G3DSA:3.40.190.10 26 376 2.1E-110 T 12-10-2018 vfu_A01843 b578181455026d663979bd5868b4df5c 430 Pfam PF13416 Bacterial extracellular solute-binding protein 40 354 2.0E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A01843 b578181455026d663979bd5868b4df5c 430 Gene3D G3DSA:3.40.190.10 142 415 2.1E-110 T 12-10-2018 vfu_A02682 6fa453f5e65bb8829b5d46bfbfe31dbd 530 Gene3D G3DSA:3.30.70.270 358 529 1.5E-42 T 12-10-2018 vfu_A02682 6fa453f5e65bb8829b5d46bfbfe31dbd 530 Pfam PF00990 Diguanylate cyclase, GGDEF domain 372 526 8.0E-38 T 12-10-2018 IPR000160 GGDEF domain vfu_A02682 6fa453f5e65bb8829b5d46bfbfe31dbd 530 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 528 1.8E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_A02682 6fa453f5e65bb8829b5d46bfbfe31dbd 530 SMART SM00267 360 530 7.1E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_A02682 6fa453f5e65bb8829b5d46bfbfe31dbd 530 SUPERFAMILY SSF55073 375 528 6.36E-38 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 Pfam PF03466 LysR substrate binding domain 100 305 1.7E-21 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 2.4E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 4.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 4.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 4.9E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 Gene3D G3DSA:3.40.190.290 101 313 8.0E-17 T 12-10-2018 vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 Gene3D G3DSA:1.10.10.10 4 94 1.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 SUPERFAMILY SSF53850 97 310 5.43E-27 T 12-10-2018 vfu_B00718 6fb207e267a522d4a8e240f960c8efcd 332 SUPERFAMILY SSF46785 9 91 1.43E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00399 0833cf3fa3c252acc0db9f12ac4b69f9 179 Pfam PF05069 Phage virion morphogenesis family 11 173 6.8E-11 T 12-10-2018 IPR006522 Phage virion morphogensis protein vfu_A00549 d915267235b137bc1f95b4e8461eb0e6 567 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 471 491 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site vfu_A00549 d915267235b137bc1f95b4e8461eb0e6 567 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 558 7.6E-262 T 12-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily vfu_A00549 d915267235b137bc1f95b4e8461eb0e6 567 Pfam PF00474 Sodium:solute symporter family 33 297 1.1E-33 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A00549 d915267235b137bc1f95b4e8461eb0e6 567 Pfam PF00474 Sodium:solute symporter family 368 489 3.1E-19 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A00549 d915267235b137bc1f95b4e8461eb0e6 567 Gene3D G3DSA:1.20.1730.10 21 337 8.4E-39 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_A00549 d915267235b137bc1f95b4e8461eb0e6 567 Gene3D G3DSA:1.20.1730.10 349 556 1.5E-29 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_B01178 c01300fcc9cdf9d167ebc515141d2053 145 Gene3D G3DSA:3.10.450.40 15 133 9.4E-9 T 12-10-2018 vfu_B01178 c01300fcc9cdf9d167ebc515141d2053 145 SUPERFAMILY SSF160719 34 138 4.05E-19 T 12-10-2018 vfu_B01178 c01300fcc9cdf9d167ebc515141d2053 145 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 144 6.5E-39 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein vfu_B01178 c01300fcc9cdf9d167ebc515141d2053 145 Pfam PF04965 Gene 25-like lysozyme 38 123 5.5E-15 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 SUPERFAMILY SSF53850 1 242 3.45E-66 T 12-10-2018 vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 SMART SM00079 22 243 0.0028 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 1.8E-77 T 12-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 Gene3D G3DSA:3.40.190.10 109 201 2.6E-74 T 12-10-2018 vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 SMART SM00062 22 243 2.1E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 1.3E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site vfu_B00451 e531138aacbe4737a8e3b00e845ad4e0 243 Gene3D G3DSA:3.40.190.10 27 240 2.6E-74 T 12-10-2018 vfu_A00377 8ddba099b23e9c8f2aa80fbff483d177 309 SUPERFAMILY SSF53850 17 293 1.17E-88 T 12-10-2018 vfu_A00377 8ddba099b23e9c8f2aa80fbff483d177 309 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 18 304 1.8E-144 T 12-10-2018 IPR017783 Choline ABC transporter, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 vfu_A00377 8ddba099b23e9c8f2aa80fbff483d177 309 Gene3D G3DSA:3.40.190.100 106 215 4.7E-97 T 12-10-2018 vfu_A00377 8ddba099b23e9c8f2aa80fbff483d177 309 Gene3D G3DSA:3.40.190.10 25 286 4.7E-97 T 12-10-2018 vfu_A00377 8ddba099b23e9c8f2aa80fbff483d177 309 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 277 1.1E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 vfu_A02814 2b227e40997bf74cd50a02cdcec67ce6 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 38.694 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 vfu_A02814 2b227e40997bf74cd50a02cdcec67ce6 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 1.2E-123 T 12-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 vfu_B01485 9921c5ea4b7dee88a89661f980f55a59 93 Pfam PF06196 Protein of unknown function (DUF997) 10 86 4.2E-29 T 12-10-2018 IPR010398 Protein of unknown function DUF997 vfu_B01485 9921c5ea4b7dee88a89661f980f55a59 93 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 7 85 9.0E-27 T 12-10-2018 IPR010398 Protein of unknown function DUF997 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 SUPERFAMILY SSF53720 9 478 8.9E-173 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 Pfam PF00171 Aldehyde dehydrogenase family 15 474 5.0E-173 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 Gene3D G3DSA:3.40.309.10 255 444 2.2E-184 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 26 473 1.1E-211 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 Gene3D G3DSA:3.40.605.10 21 469 2.2E-184 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00029 23d8aa754fe70752f70d446ed2f3bc70 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_B00176 a4f9ea3b5aa25db97953342e45523644 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 10 322 4.4E-96 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter vfu_B00176 a4f9ea3b5aa25db97953342e45523644 332 PIRSF PIRSF026166 1 332 8.9E-103 T 12-10-2018 IPR016833 Putative sodium bile acid cotransporter vfu_B00176 a4f9ea3b5aa25db97953342e45523644 332 Gene3D G3DSA:1.20.1530.20 4 328 3.6E-32 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A01223 c2d3246084c550416093df1ce9d7646c 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.2E-18 T 12-10-2018 IPR021249 Protein of unknown function DUF2788 vfu_B00181 aa5da02bfd93a1c44714f65785387761 94 ProSitePatterns PS00018 EF-hand calcium-binding domain. 65 77 - T 12-10-2018 IPR018247 EF-Hand 1, calcium-binding site vfu_B00181 aa5da02bfd93a1c44714f65785387761 94 Gene3D G3DSA:1.10.238.10 35 86 2.5E-9 T 12-10-2018 vfu_B00181 aa5da02bfd93a1c44714f65785387761 94 SUPERFAMILY SSF47473 37 85 8.32E-7 T 12-10-2018 IPR011992 EF-hand domain pair vfu_B00449 c7596b941368c27a66a70f4deb53c7b7 75 Gene3D G3DSA:1.10.3720.10 3 75 3.3E-10 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00449 c7596b941368c27a66a70f4deb53c7b7 75 SUPERFAMILY SSF161098 9 72 8.24E-9 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00449 c7596b941368c27a66a70f4deb53c7b7 75 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 71 4.4E-15 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A02266 fc7bf1b5a998ee2a68a8ad0a14ee2b62 104 Pfam PF00460 Flagella basal body rod protein 9 26 1.5E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A02266 fc7bf1b5a998ee2a68a8ad0a14ee2b62 104 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 2 102 3.5E-27 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 vfu_A02266 fc7bf1b5a998ee2a68a8ad0a14ee2b62 104 PIRSF PIRSF002889 1 104 8.4E-30 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 vfu_B01238 6c457df23e9b75751d7377598c1ddf28 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 429 1.5E-115 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B01238 6c457df23e9b75751d7377598c1ddf28 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 424 1.3E-116 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B01238 6c457df23e9b75751d7377598c1ddf28 435 PIRSF PIRSF006066 6 435 3.5E-140 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 2.4E-28 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 Gene3D G3DSA:3.10.25.10 210 314 5.1E-38 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 Pfam PF00551 Formyl transferase 6 183 1.6E-49 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 SUPERFAMILY SSF53328 5 210 2.35E-67 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 311 6.5E-109 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 37.215 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 SUPERFAMILY SSF50486 208 310 6.91E-33 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 Gene3D G3DSA:3.40.50.170 1 209 5.3E-89 T 12-10-2018 vfu_A00273 039f473703aff7530abc7288ab0ec4ca 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_B00504 d52ca72a163177ccedf133edbe4542d7 302 SUPERFAMILY SSF103481 203 281 3.53E-5 T 12-10-2018 vfu_B00504 d52ca72a163177ccedf133edbe4542d7 302 Pfam PF00892 EamA-like transporter family 142 281 3.1E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00504 d52ca72a163177ccedf133edbe4542d7 302 Pfam PF00892 EamA-like transporter family 3 128 2.7E-6 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00504 d52ca72a163177ccedf133edbe4542d7 302 SUPERFAMILY SSF103481 32 130 4.45E-9 T 12-10-2018 vfu_B00370 9d54e86af588057529530438909cf9c4 179 Pfam PF06892 Phage regulatory protein CII (CP76) 11 170 3.2E-61 T 12-10-2018 IPR009679 Bacteriophage 186, CII vfu_A00805 55f655d6b1fed9eaaa374f9c2e9128bd 200 Pfam PF00694 Aconitase C-terminal domain 1 125 5.8E-39 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 vfu_A00805 55f655d6b1fed9eaaa374f9c2e9128bd 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 44.162 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 vfu_A00805 55f655d6b1fed9eaaa374f9c2e9128bd 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 2.4E-98 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 vfu_A00805 55f655d6b1fed9eaaa374f9c2e9128bd 200 SUPERFAMILY SSF52016 2 196 7.85E-61 T 12-10-2018 vfu_A00805 55f655d6b1fed9eaaa374f9c2e9128bd 200 Gene3D G3DSA:3.20.19.10 1 180 6.0E-78 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 vfu_A02698 e870a157e93a17ab9ab1701d6896da6f 103 Gene3D G3DSA:1.20.1440.40 1 102 2.9E-33 T 12-10-2018 IPR036814 YqcC-like superfamily vfu_A02698 e870a157e93a17ab9ab1701d6896da6f 103 Pfam PF04287 tRNA pseudouridine synthase C 7 100 1.7E-34 T 12-10-2018 IPR023376 YqcC-like domain vfu_A02698 e870a157e93a17ab9ab1701d6896da6f 103 SUPERFAMILY SSF158452 4 101 5.89E-35 T 12-10-2018 IPR036814 YqcC-like superfamily vfu_A02698 e870a157e93a17ab9ab1701d6896da6f 103 PIRSF PIRSF006257 1 103 1.4E-37 T 12-10-2018 IPR007384 Protein of unknown function UCP006257 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 PIRSF PIRSF006294 4 541 1.4E-226 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 12-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 Gene3D G3DSA:2.170.8.10 49 351 1.0E-235 T 12-10-2018 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 492 1.2E-209 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 SUPERFAMILY SSF68923 11 228 8.2E-87 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 SUPERFAMILY SSF53795 230 541 2.49E-128 T 12-10-2018 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 Gene3D G3DSA:3.90.228.20 236 526 1.0E-235 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.883 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 Gene3D G3DSA:3.40.449.10 25 235 1.0E-235 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 vfu_A00506 29bf4edc8effa90c0ea6d66f014e5cac 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 11 541 3.3E-276 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 vfu_A01087 4506fba912b53e09663a9c96662ccada 103 Pfam PF00034 Cytochrome c 25 103 8.6E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A01087 4506fba912b53e09663a9c96662ccada 103 Gene3D G3DSA:1.10.760.10 21 103 8.9E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01087 4506fba912b53e09663a9c96662ccada 103 SUPERFAMILY SSF46626 14 102 2.07E-23 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01087 4506fba912b53e09663a9c96662ccada 103 PRINTS PR00605 Class IC cytochrome C signature 32 43 8.4E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 vfu_A01087 4506fba912b53e09663a9c96662ccada 103 PRINTS PR00605 Class IC cytochrome C signature 77 99 8.4E-5 T 12-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 vfu_A02954 6b0486f4f525f73c9e966cf11ec719f1 149 PIRSF PIRSF006318 1 138 3.4E-50 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 vfu_A02954 6b0486f4f525f73c9e966cf11ec719f1 149 Pfam PF06295 Protein of unknown function (DUF1043) 6 131 2.7E-45 T 12-10-2018 IPR009386 Protein of unknown function DUF1043 vfu_A01397 0512031d999ca51e944b32c23080de12 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.0E-29 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 vfu_A01397 0512031d999ca51e944b32c23080de12 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.9E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01397 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.0E-12 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01397 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.0E-12 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01397 0512031d999ca51e944b32c23080de12 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.0E-12 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01397 0512031d999ca51e944b32c23080de12 89 PIRSF PIRSF004669 1 89 6.6E-26 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_B00381 23af7047ac5208e1f527a09d93fd35fa 128 Pfam PF07409 Phage protein GP46 19 127 2.4E-32 T 12-10-2018 IPR010877 Bacteriophage Mu, Gp46 vfu_A00978 58e019b45ceb4f8312420a14b55f7b24 86 SUPERFAMILY SSF46992 3 86 1.57E-32 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00978 58e019b45ceb4f8312420a14b55f7b24 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 1.2E-31 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00978 58e019b45ceb4f8312420a14b55f7b24 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.439 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00978 58e019b45ceb4f8312420a14b55f7b24 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 2.0E-28 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00978 58e019b45ceb4f8312420a14b55f7b24 86 Pfam PF01649 Ribosomal protein S20 2 84 1.2E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00978 58e019b45ceb4f8312420a14b55f7b24 86 Gene3D G3DSA:1.20.58.110 1 86 3.1E-30 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00142 2fd1eeee2234f41e42bb320305e4c6c9 421 Gene3D G3DSA:3.40.50.2000 214 404 4.8E-62 T 12-10-2018 vfu_A00142 2fd1eeee2234f41e42bb320305e4c6c9 421 SUPERFAMILY SSF53756 50 404 2.2E-14 T 12-10-2018 vfu_A00142 2fd1eeee2234f41e42bb320305e4c6c9 421 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 209 1.0E-58 T 12-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 vfu_A00142 2fd1eeee2234f41e42bb320305e4c6c9 421 Gene3D G3DSA:3.40.50.11720 34 207 1.4E-45 T 12-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 vfu_A01738 3882571c0050484a96fcc69d7b3d96ff 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 2.9E-49 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01738 3882571c0050484a96fcc69d7b3d96ff 377 SUPERFAMILY SSF47240 3 341 2.69E-112 T 12-10-2018 IPR009078 Ferritin-like superfamily vfu_A01738 3882571c0050484a96fcc69d7b3d96ff 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 vfu_A01738 3882571c0050484a96fcc69d7b3d96ff 377 Gene3D G3DSA:1.10.620.20 2 341 8.9E-145 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 vfu_A02074 c668d5efe1363b735a44150fae412e00 124 Pfam PF13671 AAA domain 5 100 3.1E-13 T 12-10-2018 vfu_A02074 c668d5efe1363b735a44150fae412e00 124 Gene3D G3DSA:3.40.50.300 3 124 2.4E-23 T 12-10-2018 vfu_A02074 c668d5efe1363b735a44150fae412e00 124 SUPERFAMILY SSF52540 6 99 1.41E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00019 23fad54ea9bbb6661ebd6e50c2b88c2f 154 SUPERFAMILY SSF52540 28 151 2.33E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00019 23fad54ea9bbb6661ebd6e50c2b88c2f 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 3.5E-51 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 vfu_A00019 23fad54ea9bbb6661ebd6e50c2b88c2f 154 Gene3D G3DSA:3.40.50.300 2 153 1.1E-47 T 12-10-2018 vfu_A00019 23fad54ea9bbb6661ebd6e50c2b88c2f 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 134 4.2E-42 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 Gene3D G3DSA:3.40.50.2300 30 143 1.0E-20 T 12-10-2018 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 Gene3D G3DSA:1.10.10.10 146 216 2.7E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 SMART SM00421 153 210 8.1E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 2.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 2.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 2.7E-11 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 9.6E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A03121 ba771acd90a180adc18be6825b6a0172 216 SUPERFAMILY SSF46894 140 212 8.16E-19 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00442 f76b3c6bdacce71d91565cfbc8ade992 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 4.1E-32 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 vfu_B00442 f76b3c6bdacce71d91565cfbc8ade992 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 2.3E-36 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 vfu_B00442 f76b3c6bdacce71d91565cfbc8ade992 107 SUPERFAMILY SSF50022 1 106 1.83E-32 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_B00442 f76b3c6bdacce71d91565cfbc8ade992 107 Gene3D G3DSA:2.102.10.10 1 107 8.3E-30 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:3.40.50.300 216 451 2.2E-71 T 12-10-2018 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:1.10.10.1020 9 134 2.1E-22 T 12-10-2018 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 24 708 49.374 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 15 710 2.5E-214 T 12-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Pfam PF13538 UvrD-like helicase C-terminal domain 639 685 1.1E-14 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:3.40.50.300 577 699 1.2E-25 T 12-10-2018 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Gene3D G3DSA:3.40.50.300 461 576 2.6E-24 T 12-10-2018 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 17 456 1.99E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 Pfam PF13604 AAA domain 249 410 2.7E-30 T 12-10-2018 vfu_A02833 5f4d1e23adc8e917b5d183cb88ea8ad9 718 SUPERFAMILY SSF52540 376 711 4.86E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 PRINTS PR01021 OMPA domain signature 79 101 6.0E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 PRINTS PR01021 OMPA domain signature 109 124 6.0E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 PRINTS PR01021 OMPA domain signature 124 140 6.0E-16 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 Gene3D G3DSA:3.30.1330.60 50 179 2.0E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 ProSitePatterns PS01068 OmpA-like domain. 111 155 - T 12-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 Pfam PF00691 OmpA family 78 173 4.9E-21 T 12-10-2018 IPR006665 OmpA-like domain vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 179 30.939 T 12-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 76 179 1.3E-44 T 12-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 vfu_A02341 2fd1d17c8c45e60a43dd0d79a6b03958 179 SUPERFAMILY SSF103088 70 179 1.57E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B01337 59e84232fe793f861f21075510b7f528 354 Gene3D G3DSA:3.20.20.70 3 350 2.6E-108 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B01337 59e84232fe793f861f21075510b7f528 354 Pfam PF03060 Nitronate monooxygenase 6 340 5.2E-75 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 vfu_B01337 59e84232fe793f861f21075510b7f528 354 SUPERFAMILY SSF51412 9 327 3.51E-65 T 12-10-2018 vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 5.2E-113 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 SUPERFAMILY SSF52540 201 452 1.67E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 Gene3D G3DSA:1.10.860.10 17 180 2.6E-52 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 SUPERFAMILY SSF48024 22 133 4.58E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 1.6E-34 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 2.8E-174 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 vfu_A03147 688cadb6ccd080c5c32d4c163ef82afe 469 Gene3D G3DSA:3.40.50.300 181 460 3.3E-106 T 12-10-2018 vfu_A00029 2d3aacd5f1b197f8a9dbf7939f76a074 295 Pfam PF00892 EamA-like transporter family 5 134 1.1E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A00029 2d3aacd5f1b197f8a9dbf7939f76a074 295 Pfam PF00892 EamA-like transporter family 156 294 8.2E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A00029 2d3aacd5f1b197f8a9dbf7939f76a074 295 SUPERFAMILY SSF103481 36 140 1.14E-9 T 12-10-2018 vfu_A00029 2d3aacd5f1b197f8a9dbf7939f76a074 295 SUPERFAMILY SSF103481 216 294 6.67E-10 T 12-10-2018 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 575 51.034 T 12-10-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 Pfam PF03471 Transporter associated domain 497 570 8.3E-8 T 12-10-2018 IPR005170 Transporter-associated domain vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 Gene3D G3DSA:1.20.1530.20 7 392 9.6E-21 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 6.2E-56 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 Gene3D G3DSA:3.30.70.1450 405 485 1.5E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 SUPERFAMILY SSF56176 499 570 9.27E-10 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 Pfam PF02080 TrkA-C domain 418 484 1.9E-11 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 SUPERFAMILY SSF116726 412 484 1.01E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A00551 1661c246e8bb22dd3c0977cef0d0dc35 581 SMART SM01091 493 572 7.6E-11 T 12-10-2018 IPR005170 Transporter-associated domain vfu_A01166 38336ddd706065f91be82624c9d3e70f 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 2.1E-30 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR vfu_A01166 38336ddd706065f91be82624c9d3e70f 115 Pfam PF03960 ArsC family 6 112 1.1E-17 T 12-10-2018 IPR006660 Arsenate reductase-like vfu_A01166 38336ddd706065f91be82624c9d3e70f 115 SUPERFAMILY SSF52833 2 114 3.16E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01166 38336ddd706065f91be82624c9d3e70f 115 Gene3D G3DSA:3.40.30.10 2 115 2.1E-42 T 12-10-2018 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 SUPERFAMILY SSF103473 13 446 3.53E-86 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 Pfam PF07690 Major Facilitator Superfamily 34 401 4.0E-49 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 Gene3D G3DSA:1.20.1250.20 241 452 2.1E-61 T 12-10-2018 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 PIRSF PIRSF002808 5 453 2.6E-168 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 439 9.9E-235 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 1.0E-150 T 12-10-2018 vfu_B01205 0f468ab414f3f83478c64bbbd34d8240 456 Gene3D G3DSA:1.20.1250.20 19 227 4.2E-58 T 12-10-2018 vfu_B01083 dd91dc3fc021eb74267ab212ddc0ba27 388 SUPERFAMILY SSF103473 2 377 6.8E-52 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B01083 dd91dc3fc021eb74267ab212ddc0ba27 388 Pfam PF07690 Major Facilitator Superfamily 12 344 6.6E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B01083 dd91dc3fc021eb74267ab212ddc0ba27 388 Gene3D G3DSA:1.20.1720.10 1 376 3.0E-81 T 12-10-2018 vfu_B00873 05f784513ef74d4dcbe9b4783f3a4094 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.3E-137 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 vfu_B00873 05f784513ef74d4dcbe9b4783f3a4094 266 SUPERFAMILY SSF100950 1 263 6.28E-104 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B00873 05f784513ef74d4dcbe9b4783f3a4094 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 218 6.1E-20 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 vfu_B00873 05f784513ef74d4dcbe9b4783f3a4094 266 Gene3D G3DSA:3.40.50.1360 1 266 2.6E-118 T 12-10-2018 vfu_B00873 05f784513ef74d4dcbe9b4783f3a4094 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 vfu_B00873 05f784513ef74d4dcbe9b4783f3a4094 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.845 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 vfu_B00077 c3a8180ab2a5f6c862affce3a5be3bde 116 Pfam PF06942 GlpM protein 6 112 2.1E-47 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC vfu_B00077 c3a8180ab2a5f6c862affce3a5be3bde 116 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 15 112 5.0E-38 T 12-10-2018 IPR009707 Membrane protein GlpM/YdgC vfu_B00719 d1ae7c34bff4778dcf138f11222c41e9 132 SUPERFAMILY SSF55961 3 130 3.67E-32 T 12-10-2018 vfu_B00719 d1ae7c34bff4778dcf138f11222c41e9 132 Gene3D G3DSA:3.30.530.20 1 131 1.2E-46 T 12-10-2018 IPR023393 START-like domain superfamily vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.9E-66 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Pfam PF16193 AAA C-terminal domain 189 268 5.7E-21 T 12-10-2018 IPR032423 AAA C-terminal domain vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:1.10.3710.10 347 448 1.0E-37 T 12-10-2018 vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 SUPERFAMILY SSF48019 253 435 4.14E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 8.1E-17 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 SMART SM00382 50 166 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:1.20.272.10 242 346 1.8E-42 T 12-10-2018 vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:3.40.50.300 3 165 1.4E-48 T 12-10-2018 vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 SUPERFAMILY SSF52540 10 235 6.24E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01552 cd3361edfaa6757878aa4b139b023ce6 449 Gene3D G3DSA:1.10.8.60 166 241 9.7E-24 T 12-10-2018 vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 SUPERFAMILY SSF74863 35 147 5.36E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 SUPERFAMILY SSF52833 478 596 7.68E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 Pfam PF11412 Disulphide bond corrector protein DsbC 36 146 1.3E-30 T 12-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 ProSitePatterns PS00194 Thioredoxin family active site. 506 524 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 Gene3D G3DSA:2.60.40.1250 30 162 1.9E-40 T 12-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 202 405 5.5E-17 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 598 39.245 T 12-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 Gene3D G3DSA:3.40.30.10 471 598 1.9E-34 T 12-10-2018 vfu_A00554 f7ef37823060b68dddf8694c4d6a833a 599 Pfam PF13899 Thioredoxin-like 487 566 3.1E-16 T 12-10-2018 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 Pfam PF03466 LysR substrate binding domain 91 291 4.7E-37 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.1E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 Gene3D G3DSA:1.10.10.10 7 95 6.3E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 Gene3D G3DSA:3.40.190.10 103 288 5.2E-60 T 12-10-2018 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 Gene3D G3DSA:3.40.190.10 163 261 5.2E-60 T 12-10-2018 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 SUPERFAMILY SSF53850 92 296 8.87E-39 T 12-10-2018 vfu_A02689 aad256a6e2d091088c764ab1a5762e18 310 SUPERFAMILY SSF46785 3 85 3.27E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00717 262af2bb6a64d1af6769c2b4b04f554d 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 3.2E-27 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like vfu_A00717 262af2bb6a64d1af6769c2b4b04f554d 115 SUPERFAMILY SSF110857 2 114 2.75E-32 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily vfu_A00717 262af2bb6a64d1af6769c2b4b04f554d 115 Gene3D G3DSA:3.10.490.10 4 115 2.4E-39 T 12-10-2018 vfu_A01353 2036f1bf37bfba2df8509bb5972fe7a8 93 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 2.9E-18 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 vfu_A01353 2036f1bf37bfba2df8509bb5972fe7a8 93 SUPERFAMILY SSF101498 1 89 9.42E-10 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily vfu_A01353 2036f1bf37bfba2df8509bb5972fe7a8 93 Pfam PF04316 Anti-sigma-28 factor, FlgM 41 86 7.6E-7 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal vfu_B00448 086d782ff3e6dbb65e96a69353d2bf20 141 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 5 134 4.2E-11 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00448 086d782ff3e6dbb65e96a69353d2bf20 141 Gene3D G3DSA:1.10.3720.10 1 136 2.9E-28 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00448 086d782ff3e6dbb65e96a69353d2bf20 141 SUPERFAMILY SSF161098 4 121 1.44E-22 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00505 1e43b108c415653f741b55f46a6cecff 632 Pfam PF05170 AsmA family 2 570 2.4E-115 T 12-10-2018 IPR007844 AsmA vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 Gene3D G3DSA:3.60.150.10 1 360 1.8E-160 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.576 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 PIRSF PIRSF001456 3 360 5.6E-142 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 Pfam PF01264 Chorismate synthase 10 345 5.2E-143 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.2E-142 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 SUPERFAMILY SSF103263 4 356 9.81E-150 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01206 c23eb0cce4f202474af2cc8f001f72ff 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 vfu_A01833 8d55c9c7306beed877b71584967144cf 280 Pfam PF02517 CAAX protease self-immunity 178 267 2.7E-18 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 vfu_A00343 c24e03714700151f1522f65b195c8137 105 Pfam PF03899 ATP synthase I chain 2 87 6.1E-19 T 12-10-2018 IPR005598 ATP synthase protein I vfu_B00739 2d96eb9865644502e9ac28fb24ebe7c4 119 SUPERFAMILY SSF53850 20 114 4.52E-14 T 12-10-2018 vfu_B00739 2d96eb9865644502e9ac28fb24ebe7c4 119 Gene3D G3DSA:3.40.190.10 21 93 2.4E-20 T 12-10-2018 vfu_B00739 2d96eb9865644502e9ac28fb24ebe7c4 119 Pfam PF03466 LysR substrate binding domain 20 114 7.1E-16 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00739 2d96eb9865644502e9ac28fb24ebe7c4 119 Gene3D G3DSA:3.40.190.10 94 112 2.4E-20 T 12-10-2018 vfu_B00272 617eeb3c51596b95803a8185b31bc0fc 380 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 244 6.6E-59 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 vfu_B00272 617eeb3c51596b95803a8185b31bc0fc 380 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 4.5E-18 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_B00272 617eeb3c51596b95803a8185b31bc0fc 380 Gene3D G3DSA:3.60.21.10 1 266 7.0E-80 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_B00272 617eeb3c51596b95803a8185b31bc0fc 380 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 268 351 1.1E-9 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain vfu_B00272 617eeb3c51596b95803a8185b31bc0fc 380 SUPERFAMILY SSF56300 1 320 8.66E-60 T 12-10-2018 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Gene3D G3DSA:3.30.70.2740 399 482 4.5E-8 T 12-10-2018 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 SUPERFAMILY SSF56176 12 269 2.54E-55 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Pfam PF01565 FAD binding domain 48 184 2.0E-27 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 SUPERFAMILY SSF55103 276 528 1.59E-57 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 SUPERFAMILY SSF46548 500 629 9.24E-21 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Gene3D G3DSA:1.10.1060.10 523 639 6.1E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Pfam PF13183 4Fe-4S dicluster domain 545 617 3.5E-10 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Gene3D G3DSA:1.10.45.10 485 522 7.9E-6 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Pfam PF02754 Cysteine-rich domain 715 788 0.0031 T 12-10-2018 IPR004017 Cysteine-rich domain vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 547 558 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B00816 37b1a92bdc839a08e5ff45c9b47715f5 947 Pfam PF02913 FAD linked oxidases, C-terminal domain 273 521 4.0E-61 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 vfu_A00705 157343f98f71c15c54b4f8a24c032e25 206 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 195 1.5E-81 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 vfu_A00705 157343f98f71c15c54b4f8a24c032e25 206 SUPERFAMILY SSF52540 26 201 3.94E-38 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00705 157343f98f71c15c54b4f8a24c032e25 206 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 38.013 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 vfu_A00705 157343f98f71c15c54b4f8a24c032e25 206 Gene3D G3DSA:3.40.50.300 9 206 2.4E-80 T 12-10-2018 vfu_A00705 157343f98f71c15c54b4f8a24c032e25 206 Pfam PF01583 Adenylylsulphate kinase 31 182 2.7E-71 T 12-10-2018 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 SMART SM00387 332 444 4.7E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 SMART SM00388 223 289 1.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 SUPERFAMILY SSF47384 206 288 1.37E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 440 5.9E-113 T 12-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 Gene3D G3DSA:3.30.565.10 293 444 1.1E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 Gene3D G3DSA:1.10.287.130 173 290 3.1E-20 T 12-10-2018 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 3.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 3.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 3.3E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 SUPERFAMILY SSF55874 279 441 1.57E-32 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 224 288 6.3E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A00185 da52cbede0d4fe90b3db105486ccc5f8 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 442 2.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 35 276 1.9E-63 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 Pfam PF07549 SecD/SecF GG Motif 30 47 6.0E-6 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 Pfam PF02355 Protein export membrane protein 102 284 1.4E-55 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 SUPERFAMILY SSF82866 84 283 7.06E-35 T 12-10-2018 vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 93 274 1.1E-48 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 Gene3D G3DSA:1.20.1640.10 102 290 2.0E-10 T 12-10-2018 vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 287 21.615 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 PRINTS PR01755 Bacterial translocase SecF protein signature 34 49 1.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 PRINTS PR01755 Bacterial translocase SecF protein signature 225 240 1.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 PRINTS PR01755 Bacterial translocase SecF protein signature 145 159 1.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_B00323 f01f4d38377dfb9ade64a5eff8a3d23e 300 PRINTS PR01755 Bacterial translocase SecF protein signature 193 211 1.4E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial vfu_B00066 e724d119339786686c6c828e2da9035a 180 Gene3D G3DSA:3.40.50.850 1 180 3.6E-44 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_B00066 e724d119339786686c6c828e2da9035a 180 Pfam PF00857 Isochorismatase family 7 157 8.8E-26 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 vfu_B00066 e724d119339786686c6c828e2da9035a 180 SUPERFAMILY SSF52499 2 180 8.9E-43 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_B00058 34d9e5db03fe9cfbe8df1665b5cd4ceb 301 SUPERFAMILY SSF103481 40 131 2.62E-12 T 12-10-2018 vfu_B00058 34d9e5db03fe9cfbe8df1665b5cd4ceb 301 Pfam PF00892 EamA-like transporter family 141 279 2.2E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00058 34d9e5db03fe9cfbe8df1665b5cd4ceb 301 Pfam PF00892 EamA-like transporter family 6 131 5.0E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00058 34d9e5db03fe9cfbe8df1665b5cd4ceb 301 SUPERFAMILY SSF103481 201 282 1.57E-9 T 12-10-2018 vfu_B00108 17e473cc4aa88edce403a8cf09bdd2ad 216 SUPERFAMILY SSF52317 1 213 2.78E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00108 17e473cc4aa88edce403a8cf09bdd2ad 216 PIRSF PIRSF006320 1 216 1.3E-105 T 12-10-2018 IPR026041 Glyoxalase ElbB vfu_B00108 17e473cc4aa88edce403a8cf09bdd2ad 216 Gene3D G3DSA:3.40.50.880 1 216 1.3E-88 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A03107 41dbff90e89fef361b4252826260042b 168 Gene3D G3DSA:3.30.700.10 11 166 7.2E-7 T 12-10-2018 vfu_A03107 41dbff90e89fef361b4252826260042b 168 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 4.2E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03107 41dbff90e89fef361b4252826260042b 168 SUPERFAMILY SSF54523 11 81 1.57E-8 T 12-10-2018 vfu_A03107 41dbff90e89fef361b4252826260042b 168 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 6.9E-7 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A01634 269ee068f27563e4e8d82b153ee906ce 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 54.834 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 vfu_A01634 269ee068f27563e4e8d82b153ee906ce 323 SUPERFAMILY SSF53335 91 323 2.3E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01634 269ee068f27563e4e8d82b153ee906ce 323 Pfam PF08003 Protein of unknown function (DUF1698) 8 322 3.2E-169 T 12-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like vfu_A01634 269ee068f27563e4e8d82b153ee906ce 323 Gene3D G3DSA:3.40.50.150 90 293 1.2E-25 T 12-10-2018 vfu_A01634 269ee068f27563e4e8d82b153ee906ce 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 321 1.1E-147 T 12-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 vfu_A02945 db8e62f9d0407b31fbeb451f3aaa2e14 189 SMART SM00749 127 189 0.0099 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria vfu_A02945 db8e62f9d0407b31fbeb451f3aaa2e14 189 SMART SM00749 50 113 230.0 T 12-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria vfu_A02945 db8e62f9d0407b31fbeb451f3aaa2e14 189 Pfam PF04972 BON domain 46 112 1.0E-7 T 12-10-2018 IPR007055 BON domain vfu_A02945 db8e62f9d0407b31fbeb451f3aaa2e14 189 Pfam PF04972 BON domain 122 188 8.0E-15 T 12-10-2018 IPR007055 BON domain vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 SUPERFAMILY SSF50022 5 157 5.5E-50 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 Pfam PF00355 Rieske [2Fe-2S] domain 43 125 2.5E-22 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 SUPERFAMILY SSF55961 160 441 7.06E-60 T 12-10-2018 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 85 108 - T 12-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 Hamap MF_01648 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [hcaE]. 1 453 93.32 T 12-10-2018 IPR020875 3-phenylpropionate/cinnamic acid dioxygenase, alpha subunit GO:0005506|GO:0008695|GO:0019439|GO:0055114 KEGG: 00360+1.14.12.19|MetaCyc: PWY-6690 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 164 433 2.2E-42 T 12-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 5.3E-59 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 184 206 5.3E-59 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 5.3E-59 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 5.3E-59 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 5.3E-59 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 5.3E-59 T 12-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 Gene3D G3DSA:3.90.380.10 17 432 1.5E-154 T 12-10-2018 vfu_A01965 6ce9c33ed9e4643358bebc376d7920c8 453 Gene3D G3DSA:2.102.10.10 42 171 1.5E-154 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 SUPERFAMILY SSF53850 95 295 9.23E-34 T 12-10-2018 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 Pfam PF03466 LysR substrate binding domain 93 289 1.2E-27 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 Gene3D G3DSA:3.40.190.10 103 286 5.9E-46 T 12-10-2018 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 Gene3D G3DSA:3.40.190.10 163 259 5.9E-46 T 12-10-2018 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 Gene3D G3DSA:1.10.10.10 8 95 6.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 SUPERFAMILY SSF46785 6 87 1.28E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02871 65c3cc9e6516d7e4e29cbade6240d588 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 9.0E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00660 94d5aff75ff15a4919cf63da534c6ccb 193 Pfam PF13489 Methyltransferase domain 30 157 2.8E-16 T 12-10-2018 vfu_B00660 94d5aff75ff15a4919cf63da534c6ccb 193 SUPERFAMILY SSF53335 5 193 1.99E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00660 94d5aff75ff15a4919cf63da534c6ccb 193 Gene3D G3DSA:3.40.50.150 23 182 3.4E-25 T 12-10-2018 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 Gene3D G3DSA:1.10.520.20 2 106 1.5E-39 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 5.0E-53 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 19.221 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 SUPERFAMILY SSF47928 3 105 1.57E-28 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 7.2E-63 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.3E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.3E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.3E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.3E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.3E-28 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00347 5e108e4d7aa43849e66789d893460c71 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00186 6638547fc6e1116d33494219341795d5 76 Pfam PF00486 Transcriptional regulatory protein, C terminal 1 71 1.1E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00186 6638547fc6e1116d33494219341795d5 76 SMART SM00862 1 71 4.3E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00186 6638547fc6e1116d33494219341795d5 76 Gene3D G3DSA:1.10.10.10 1 76 1.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00186 6638547fc6e1116d33494219341795d5 76 SUPERFAMILY SSF46894 1 72 2.04E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 Gene3D G3DSA:3.50.50.60 118 244 5.1E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.5E-76 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 7.1E-48 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.4E-38 T 12-10-2018 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.4E-38 T 12-10-2018 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 2.4E-38 T 12-10-2018 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 2.4E-38 T 12-10-2018 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.4E-38 T 12-10-2018 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 3.1E-124 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 Gene3D G3DSA:3.50.50.60 10 312 5.1E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02200 a8bbc094e3743a5b2ee2c97b6e95a549 319 SUPERFAMILY SSF51905 2 313 3.43E-54 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01175 b4df40a25360af6af23f52d654c7ebdf 116 Pfam PF11169 Protein of unknown function (DUF2956) 8 112 7.3E-43 T 12-10-2018 IPR021339 Protein of unknown function DUF2956 vfu_A00065 df3f0a260a798c3b16897313bbb2088f 212 SUPERFAMILY SSF53098 27 198 7.12E-35 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00065 df3f0a260a798c3b16897313bbb2088f 212 Pfam PF00929 Exonuclease 31 193 1.2E-19 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A00065 df3f0a260a798c3b16897313bbb2088f 212 SMART SM00479 29 202 2.5E-27 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A00065 df3f0a260a798c3b16897313bbb2088f 212 Gene3D G3DSA:3.30.420.10 23 202 4.3E-34 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A02610 2d759c3d3d019bf7beeecfa837b1ba32 122 Gene3D G3DSA:3.30.70.940 1 120 2.2E-30 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A02610 2d759c3d3d019bf7beeecfa837b1ba32 122 SUPERFAMILY SSF82679 2 56 8.63E-13 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A02610 2d759c3d3d019bf7beeecfa837b1ba32 122 Pfam PF02357 Transcription termination factor nusG 5 50 2.3E-7 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 vfu_A02596 d074fe675198b8f6e10c7007808e53bb 425 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.4E-6 T 12-10-2018 vfu_A02596 d074fe675198b8f6e10c7007808e53bb 425 PRINTS PR00173 Glutamate-aspartate symporter signature 358 377 1.4E-6 T 12-10-2018 vfu_A02596 d074fe675198b8f6e10c7007808e53bb 425 Pfam PF13726 Na+-H+ antiporter family 1 72 2.9E-28 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal vfu_A02596 d074fe675198b8f6e10c7007808e53bb 425 Pfam PF03553 Na+/H+ antiporter family 134 419 2.4E-75 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 336 6.7E-25 T 12-10-2018 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 6.7E-25 T 12-10-2018 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 6.7E-25 T 12-10-2018 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 6.7E-25 T 12-10-2018 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 320 6.7E-25 T 12-10-2018 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 Gene3D G3DSA:3.50.50.60 2 333 1.5E-85 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 SUPERFAMILY SSF51905 2 370 2.5E-65 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 Gene3D G3DSA:3.30.70.2450 177 258 1.5E-85 T 12-10-2018 vfu_A01977 34fd184609ae11cad560151e1e6022c3 540 Pfam PF01494 FAD binding domain 1 334 2.1E-77 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 SUPERFAMILY SSF52402 7 170 1.32E-46 T 12-10-2018 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 Gene3D G3DSA:3.40.50.620 9 177 2.1E-143 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 51.627 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 Gene3D G3DSA:3.90.1260.10 68 355 2.1E-143 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 SUPERFAMILY SSF69864 177 399 2.22E-85 T 12-10-2018 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 6.4E-136 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 Pfam PF00764 Arginosuccinate synthase 10 396 3.0E-144 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00622 7fc26b358ceaafaa1ba0d4617d905eaf 405 Gene3D G3DSA:1.20.5.470 368 402 5.8E-8 T 12-10-2018 vfu_A00509 e17257ff1fb8e0f21dd93a0d32eebefa 296 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 30 296 7.4E-81 T 12-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 vfu_A00509 e17257ff1fb8e0f21dd93a0d32eebefa 296 SUPERFAMILY SSF50156 204 295 8.02E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 vfu_A00509 e17257ff1fb8e0f21dd93a0d32eebefa 296 Pfam PF11356 Type II secretion system protein C 32 169 2.3E-44 T 12-10-2018 IPR024961 Type II secretion system protein C, N-terminal vfu_A00509 e17257ff1fb8e0f21dd93a0d32eebefa 296 Gene3D G3DSA:2.30.30.830 103 170 4.1E-28 T 12-10-2018 vfu_A00509 e17257ff1fb8e0f21dd93a0d32eebefa 296 Gene3D G3DSA:2.30.42.10 192 296 1.8E-26 T 12-10-2018 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.868 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 Gene3D G3DSA:3.30.70.1660 115 342 2.5E-95 T 12-10-2018 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 SUPERFAMILY SSF75620 12 355 3.01E-136 T 12-10-2018 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 Gene3D G3DSA:3.30.160.20 212 293 2.5E-95 T 12-10-2018 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 2.6E-170 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 Pfam PF03462 PCRF domain 13 205 4.8E-77 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 SMART SM00937 67 180 2.0E-67 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 Gene3D G3DSA:1.20.58.410 2 104 4.1E-9 T 12-10-2018 vfu_A01142 60c85242b00e9d29b306306c18f233de 362 Pfam PF00472 RF-1 domain 218 323 7.3E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 vfu_A00874 fc8d4918fb013285d64c3bf577cafc50 183 SUPERFAMILY SSF55846 2 180 9.03E-66 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 vfu_A00874 fc8d4918fb013285d64c3bf577cafc50 183 Gene3D G3DSA:3.40.80.10 2 183 1.4E-54 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 vfu_A00874 fc8d4918fb013285d64c3bf577cafc50 183 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 1.3E-27 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 vfu_A00874 fc8d4918fb013285d64c3bf577cafc50 183 SMART SM00644 16 167 2.0E-54 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 vfu_A00859 a227eb2798514f6e2f4bd265ddda6679 439 SUPERFAMILY SSF56954 2 426 4.32E-93 T 12-10-2018 vfu_A00859 a227eb2798514f6e2f4bd265ddda6679 439 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 434 1.1E-110 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 vfu_A00859 a227eb2798514f6e2f4bd265ddda6679 439 Gene3D G3DSA:1.20.1600.10 23 438 1.5E-122 T 12-10-2018 vfu_A00859 a227eb2798514f6e2f4bd265ddda6679 439 Pfam PF02321 Outer membrane efflux protein 231 420 1.5E-32 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A00859 a227eb2798514f6e2f4bd265ddda6679 439 Pfam PF02321 Outer membrane efflux protein 25 207 2.7E-30 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01390 09c0ba72d2aa6ed6a8c9491689bef990 128 Gene3D G3DSA:1.20.120.340 1 127 2.5E-36 T 12-10-2018 vfu_A01390 09c0ba72d2aa6ed6a8c9491689bef990 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 123 2.9E-25 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A01390 09c0ba72d2aa6ed6a8c9491689bef990 128 PIRSF PIRSF039090 1 128 7.9E-39 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A01390 09c0ba72d2aa6ed6a8c9491689bef990 128 Pfam PF02561 Flagellar protein FliS 7 122 3.3E-33 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A01390 09c0ba72d2aa6ed6a8c9491689bef990 128 SUPERFAMILY SSF101116 9 125 3.27E-34 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 vfu_B01091 ae935ddc336c6015879b2aba983854bd 204 SUPERFAMILY SSF56529 9 188 2.75E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 vfu_B01091 ae935ddc336c6015879b2aba983854bd 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 200 3.2E-29 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 vfu_B01091 ae935ddc336c6015879b2aba983854bd 204 Gene3D G3DSA:3.90.850.10 7 202 3.2E-46 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 33 116 6.2E-24 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 SUPERFAMILY SSF50475 14 211 4.49E-65 T 12-10-2018 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 PIRSF PIRSF000190 1 211 3.0E-80 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 12-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 211 37.255 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 211 4.9E-19 T 12-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 Gene3D G3DSA:2.30.110.10 13 211 3.1E-76 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_B00972 d9a646f9b1ccdf2989f25fe34dff5f3d 211 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 1 211 5.7E-87 T 12-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B01446 b95a9905f5ed2805ec0098ce79e4f08b 240 SUPERFAMILY SSF52317 20 238 1.38E-38 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B01446 b95a9905f5ed2805ec0098ce79e4f08b 240 Gene3D G3DSA:3.40.50.880 9 238 1.4E-47 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B01446 b95a9905f5ed2805ec0098ce79e4f08b 240 Pfam PF00117 Glutamine amidotransferase class-I 27 197 1.4E-16 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A01737 dee81065fe64a1cb65316bbe24091e57 92 SUPERFAMILY SSF54292 4 82 6.95E-18 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A01737 dee81065fe64a1cb65316bbe24091e57 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 12-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 vfu_A01737 dee81065fe64a1cb65316bbe24091e57 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 2.9E-9 T 12-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 vfu_A01737 dee81065fe64a1cb65316bbe24091e57 92 Gene3D G3DSA:3.10.20.30 1 89 6.9E-16 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A01229 edd39068598653e948dcabeb9daab995 429 Gene3D G3DSA:2.20.28.60 1 50 8.4E-27 T 12-10-2018 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 PIRSF PIRSF001369 38 429 1.2E-172 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type vfu_A01229 edd39068598653e948dcabeb9daab995 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 vfu_A01229 edd39068598653e948dcabeb9daab995 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 3.3E-239 T 12-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 vfu_A01229 edd39068598653e948dcabeb9daab995 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 3.3E-134 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 SUPERFAMILY SSF48256 4 428 1.02E-169 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 vfu_A01229 edd39068598653e948dcabeb9daab995 429 Gene3D G3DSA:1.10.580.10 57 411 5.4E-149 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 vfu_A01229 edd39068598653e948dcabeb9daab995 429 Gene3D G3DSA:1.10.230.10 268 376 5.4E-149 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain vfu_B01166 88a1448dfe48e11ab3bbdd21f0e4eb1d 558 Pfam PF00849 RNA pseudouridylate synthase 364 511 3.5E-28 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_B01166 88a1448dfe48e11ab3bbdd21f0e4eb1d 558 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 402 416 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_B01166 88a1448dfe48e11ab3bbdd21f0e4eb1d 558 Gene3D G3DSA:3.30.2350.10 346 557 1.3E-61 T 12-10-2018 vfu_B01166 88a1448dfe48e11ab3bbdd21f0e4eb1d 558 SUPERFAMILY SSF55120 350 555 8.16E-58 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 SUPERFAMILY SSF46689 193 244 8.24E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 Pfam PF12833 Helix-turn-helix domain 216 290 4.5E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 SMART SM00342 210 293 4.6E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 Pfam PF06719 AraC-type transcriptional regulator N-terminus 27 181 3.1E-32 T 12-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 SUPERFAMILY SSF46689 246 293 2.46E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00331 8e037a0f0e105fdb64432c00d09b17a8 295 Gene3D G3DSA:1.10.10.60 189 295 1.6E-26 T 12-10-2018 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 SMART SM00422 1 70 1.3E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 Pfam PF09278 MerR, DNA binding 47 106 2.6E-12 T 12-10-2018 IPR015358 Transcription regulator MerR, DNA binding vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 SUPERFAMILY SSF46955 1 112 9.89E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.1E-7 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 Pfam PF00376 MerR family regulatory protein 2 39 6.4E-15 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B00954 e60b40f8f0a7aa1f8d6cff90f5b82236 138 Gene3D G3DSA:1.10.1660.10 1 125 3.4E-26 T 12-10-2018 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 Pfam PF01565 FAD binding domain 52 192 2.6E-34 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF55103 253 538 3.92E-54 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF56176 18 277 1.17E-49 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 Gene3D G3DSA:3.30.70.2740 414 495 9.6E-6 T 12-10-2018 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 1.1E-62 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 SUPERFAMILY SSF46548 517 685 9.94E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 Gene3D G3DSA:3.30.465.40 17 212 8.5E-45 T 12-10-2018 vfu_A02159 6dae76ed4c258fd902670cf47521d561 1012 Pfam PF13183 4Fe-4S dicluster domain 570 681 5.2E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A01447 283f5a22d9b664e05e607e78810fd12e 255 Pfam PF13247 4Fe-4S dicluster domain 101 196 8.4E-29 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A01447 283f5a22d9b664e05e607e78810fd12e 255 SUPERFAMILY SSF54862 47 231 1.15E-65 T 12-10-2018 vfu_A01447 283f5a22d9b664e05e607e78810fd12e 255 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 141 152 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A01447 283f5a22d9b664e05e607e78810fd12e 255 Gene3D G3DSA:3.30.70.20 41 248 5.5E-66 T 12-10-2018 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 4.6E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 4.6E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 4.6E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 4.6E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 4.6E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 4.6E-18 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 SUPERFAMILY SSF48029 13 113 1.67E-13 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 Pfam PF14842 FliG N-terminal domain 15 108 2.9E-16 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 SUPERFAMILY SSF48029 122 330 3.4E-44 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 Gene3D G3DSA:1.10.220.30 11 93 3.4E-13 T 12-10-2018 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 Gene3D G3DSA:1.10.220.30 120 240 2.7E-17 T 12-10-2018 vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 Pfam PF01706 FliG C-terminal domain 225 330 1.2E-29 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 Pfam PF14841 FliG middle domain 123 194 2.8E-10 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain vfu_A02250 948c13260f351934e29dea2f52a8ae4c 339 Gene3D G3DSA:1.10.220.30 241 336 9.1E-20 T 12-10-2018 vfu_B00440 720e839cb27104da22805345a1e19c47 240 Gene3D G3DSA:3.30.950.10 115 240 2.2E-45 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 vfu_B00440 720e839cb27104da22805345a1e19c47 240 SUPERFAMILY SSF53790 1 238 2.36E-78 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 vfu_B00440 720e839cb27104da22805345a1e19c47 240 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 79 112 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_B00440 720e839cb27104da22805345a1e19c47 240 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 4 18 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_B00440 720e839cb27104da22805345a1e19c47 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 210 1.2E-49 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 vfu_B00440 720e839cb27104da22805345a1e19c47 240 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 1 232 5.5E-93 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 vfu_B00440 720e839cb27104da22805345a1e19c47 240 Gene3D G3DSA:3.40.1010.10 1 114 6.1E-43 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 vfu_A02540 a694f92706c219823739d8331ced371c 146 PIRSF PIRSF006173 1 145 1.3E-65 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 vfu_A02540 a694f92706c219823739d8331ced371c 146 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 2.7E-8 T 12-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein vfu_A02540 a694f92706c219823739d8331ced371c 146 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 41.732 T 12-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 PIRSF PIRSF000808 3 345 1.5E-122 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 SUPERFAMILY SSF54197 6 179 3.4E-71 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 Gene3D G3DSA:3.30.428.10 46 177 2.4E-54 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 351 5.3E-185 T 12-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 2.7E-66 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 12-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 3.2E-65 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 SUPERFAMILY SSF54197 181 349 1.14E-54 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A01169 1c17383b0d71b8dd2b061476079684ac 354 Gene3D G3DSA:3.30.428.10 178 354 5.2E-73 T 12-10-2018 IPR036265 HIT-like superfamily vfu_A00913 2e38179f3379fd5818031f0ed2f60846 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 8.7E-7 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain vfu_A00913 2e38179f3379fd5818031f0ed2f60846 341 Gene3D G3DSA:1.10.3720.10 94 303 5.0E-15 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00913 2e38179f3379fd5818031f0ed2f60846 341 SUPERFAMILY SSF161098 96 278 1.7E-18 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00913 2e38179f3379fd5818031f0ed2f60846 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 2.6E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.2E-85 T 12-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 7.1E-38 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 SMART SM00852 14 158 1.7E-29 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 SUPERFAMILY SSF53218 7 168 6.41E-48 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 PIRSF PIRSF006443 1 166 8.8E-67 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 Gene3D G3DSA:3.40.980.10 2 170 7.1E-53 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_A02577 a3ff2302a807b4ef2168460b6758fa7d 170 Pfam PF00994 Probable molybdopterin binding domain 14 155 2.9E-35 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 SUPERFAMILY SSF56925 19 172 1.05E-26 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 Pfam PF00691 OmpA family 214 306 8.3E-24 T 12-10-2018 IPR006665 OmpA-like domain vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 SUPERFAMILY SSF103088 211 312 2.49E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 Gene3D G3DSA:3.30.1330.60 197 315 4.8E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 PRINTS PR01021 OMPA domain signature 257 273 1.9E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 PRINTS PR01021 OMPA domain signature 242 257 1.9E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 PRINTS PR01021 OMPA domain signature 212 234 1.9E-13 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 Pfam PF01389 OmpA-like transmembrane domain 20 172 3.9E-25 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 vfu_B00608 35111a99cb697453daf96a4bc22bf62a 316 Gene3D G3DSA:2.40.160.20 5 196 3.1E-31 T 12-10-2018 vfu_A02877 fdf1ad235fc8a1bfe35fc7d83095de94 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 vfu_A02877 fdf1ad235fc8a1bfe35fc7d83095de94 241 Gene3D G3DSA:3.40.50.1580 1 239 4.9E-79 T 12-10-2018 vfu_A02877 fdf1ad235fc8a1bfe35fc7d83095de94 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.2E-119 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 vfu_A02877 fdf1ad235fc8a1bfe35fc7d83095de94 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.595 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 vfu_A02877 fdf1ad235fc8a1bfe35fc7d83095de94 241 SUPERFAMILY SSF53167 3 235 9.03E-94 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 vfu_A02877 fdf1ad235fc8a1bfe35fc7d83095de94 241 Pfam PF01048 Phosphorylase superfamily 15 222 2.8E-41 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 vfu_A01479 cf8d9391e370307a57cd8659a6fb9074 347 SUPERFAMILY SSF81345 20 343 3.66E-67 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A01479 cf8d9391e370307a57cd8659a6fb9074 347 Gene3D G3DSA:1.10.3470.10 23 346 2.7E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A01479 cf8d9391e370307a57cd8659a6fb9074 347 Pfam PF01032 FecCD transport family 36 343 1.5E-78 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_A02146 ccbd940395f5bbd57f59c6957a40ecb2 257 Pfam PF01909 Nucleotidyltransferase domain 37 81 8.9E-6 T 12-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 vfu_A02146 ccbd940395f5bbd57f59c6957a40ecb2 257 SUPERFAMILY SSF81301 13 83 1.31E-8 T 12-10-2018 vfu_A02146 ccbd940395f5bbd57f59c6957a40ecb2 257 Gene3D G3DSA:3.30.460.10 8 111 2.1E-9 T 12-10-2018 vfu_A01031 5f3133070a68dfad501f9d706bcfa133 210 PIRSF PIRSF006102 3 210 5.6E-73 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_A01031 5f3133070a68dfad501f9d706bcfa133 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 6.8E-109 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 vfu_A01031 5f3133070a68dfad501f9d706bcfa133 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.137 T 12-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 vfu_A01031 5f3133070a68dfad501f9d706bcfa133 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 2.8E-62 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_B01098 c038760ec4243eb3cf9137de0d786bd7 347 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 333 1.1E-77 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 vfu_B01098 c038760ec4243eb3cf9137de0d786bd7 347 SUPERFAMILY SSF51395 3 339 1.81E-105 T 12-10-2018 vfu_B01098 c038760ec4243eb3cf9137de0d786bd7 347 Gene3D G3DSA:3.20.20.70 1 347 1.0E-120 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00993 fd7cec70c872615ca4a4891aecf5355d 357 PIRSF PIRSF001361 1 353 3.8E-162 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_A00993 fd7cec70c872615ca4a4891aecf5355d 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 1.5E-161 T 12-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 vfu_A00993 fd7cec70c872615ca4a4891aecf5355d 357 SUPERFAMILY SSF51569 8 345 2.51E-136 T 12-10-2018 vfu_A00993 fd7cec70c872615ca4a4891aecf5355d 357 Pfam PF00793 DAHP synthetase I family 42 340 1.2E-103 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A00993 fd7cec70c872615ca4a4891aecf5355d 357 Gene3D G3DSA:3.20.20.70 3 348 3.1E-156 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00375 54ccab05b6e4d799806372126760c82d 394 SMART SM00382 52 253 5.6E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00375 54ccab05b6e4d799806372126760c82d 394 Gene3D G3DSA:3.40.50.300 32 316 1.2E-69 T 12-10-2018 vfu_A00375 54ccab05b6e4d799806372126760c82d 394 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00375 54ccab05b6e4d799806372126760c82d 394 SUPERFAMILY SSF52540 43 273 1.73E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00375 54ccab05b6e4d799806372126760c82d 394 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 387 2.6E-179 T 12-10-2018 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 vfu_A00375 54ccab05b6e4d799806372126760c82d 394 Pfam PF00005 ABC transporter 43 195 9.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 Gene3D G3DSA:3.40.800.10 4 306 1.1E-62 T 12-10-2018 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 SUPERFAMILY SSF52768 4 303 1.8E-56 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 PRINTS PR00116 Arginase signature 103 118 4.1E-22 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 PRINTS PR00116 Arginase signature 230 259 4.1E-22 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 PRINTS PR00116 Arginase signature 131 158 4.1E-22 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 PRINTS PR00116 Arginase signature 181 199 4.1E-22 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 Pfam PF00491 Arginase family 6 301 6.2E-53 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B00012 3b129ff50ff27ce89e15bee2d58c1007 307 PIRSF PIRSF036979 2 302 3.6E-27 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_A01864 11df9c85789fd60dbc374c0f1c70695b 263 Pfam PF04116 Fatty acid hydroxylase superfamily 88 225 2.9E-25 T 12-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 vfu_A03048 40f65bba995bf0f5e0507e8312106715 141 SUPERFAMILY SSF53098 3 137 1.67E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A03048 40f65bba995bf0f5e0507e8312106715 141 SMART SM00732 3 104 4.5E-36 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 vfu_A03048 40f65bba995bf0f5e0507e8312106715 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 4.0E-49 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 vfu_A03048 40f65bba995bf0f5e0507e8312106715 141 Pfam PF03652 Holliday junction resolvase 4 136 5.3E-36 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 vfu_A03048 40f65bba995bf0f5e0507e8312106715 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.488 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 vfu_A03048 40f65bba995bf0f5e0507e8312106715 141 Gene3D G3DSA:3.30.420.140 1 138 3.3E-39 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 vfu_A01628 c839c1662949038fa0eae1f891adc22e 243 Gene3D G3DSA:1.10.10.2260 88 194 9.8E-50 T 12-10-2018 vfu_A01628 c839c1662949038fa0eae1f891adc22e 243 Pfam PF04288 MukE-like family 10 235 2.6E-120 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 vfu_A01628 c839c1662949038fa0eae1f891adc22e 243 Gene3D G3DSA:1.10.10.2250 1 78 1.2E-37 T 12-10-2018 vfu_A01628 c839c1662949038fa0eae1f891adc22e 243 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 240 49.887 T 12-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 SUPERFAMILY SSF52172 1 118 7.26E-35 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 SMART SM00448 1 112 1.2E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 SMART SM00862 145 216 2.4E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 SUPERFAMILY SSF46894 119 216 2.52E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 Pfam PF00072 Response regulator receiver domain 4 112 2.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 Gene3D G3DSA:3.40.50.2300 1 121 7.0E-37 T 12-10-2018 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 2.0E-21 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00654 d91d83c69b0eec8d85a3054233c5e703 218 Gene3D G3DSA:1.10.10.10 122 218 2.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01422 a11be9d402560c6d03cb46606a41869d 183 SUPERFAMILY SSF55729 17 181 3.01E-33 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B01422 a11be9d402560c6d03cb46606a41869d 183 Pfam PF13302 Acetyltransferase (GNAT) domain 22 158 3.3E-24 T 12-10-2018 IPR000182 GNAT domain vfu_B01422 a11be9d402560c6d03cb46606a41869d 183 Gene3D G3DSA:3.40.630.30 9 170 8.4E-34 T 12-10-2018 vfu_A02097 d72925aaa1211f86cb6441306214347e 76 Gene3D G3DSA:1.20.1280.100 1 73 1.2E-38 T 12-10-2018 vfu_A02097 d72925aaa1211f86cb6441306214347e 76 Pfam PF09016 Pas factor saposin fold 1 76 5.4E-43 T 12-10-2018 IPR015106 Pas factor saposin domain vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 Gene3D G3DSA:3.40.1190.20 1 300 2.0E-104 T 12-10-2018 IPR029056 Ribokinase-like vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 8.1E-110 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 SUPERFAMILY SSF53613 1 302 9.04E-85 T 12-10-2018 IPR029056 Ribokinase-like vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.491 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 9.5E-72 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 PRINTS PR00990 Ribokinase signature 33 52 1.1E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 PRINTS PR00990 Ribokinase signature 217 228 1.1E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 PRINTS PR00990 Ribokinase signature 6 27 1.1E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 PRINTS PR00990 Ribokinase signature 173 188 1.1E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_B01199 48df3f00ed992ea0140e8fb153ff8822 305 PRINTS PR00990 Ribokinase signature 105 118 1.1E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 Gene3D G3DSA:3.10.290.10 327 394 4.9E-16 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 4.7E-128 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 2.4E-79 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 Gene3D G3DSA:1.10.240.10 218 326 8.4E-33 T 12-10-2018 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 SUPERFAMILY SSF55174 320 394 3.53E-15 T 12-10-2018 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 SUPERFAMILY SSF52374 6 315 7.84E-97 T 12-10-2018 vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 Gene3D G3DSA:3.40.50.620 5 217 6.1E-75 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00925 2cd8d38241d9c0245197d0317e1b55d2 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.291 T 12-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 vfu_B00075 1d49d00c8b2312d19986a06cb8965aa4 144 SUPERFAMILY SSF101386 12 112 4.11E-13 T 12-10-2018 vfu_B00075 1d49d00c8b2312d19986a06cb8965aa4 144 Gene3D G3DSA:1.10.287.1080 4 135 1.9E-14 T 12-10-2018 vfu_B00075 1d49d00c8b2312d19986a06cb8965aa4 144 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 101 6.2E-18 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core vfu_A02949 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 SUPERFAMILY SSF81342 6 296 2.98E-93 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 vfu_A02949 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 Gene3D G3DSA:1.20.810.10 1 421 4.2E-151 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 vfu_A02949 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 PIRSF PIRSF038885 1 421 2.9E-153 T 12-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 vfu_A02949 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 1.6E-66 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 vfu_A02949 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 SUPERFAMILY SSF81648 297 411 3.71E-33 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 vfu_A02949 48a7a4ad4d16b6f6c8585c4ac1511f1a 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 6.0E-41 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 vfu_B01187 36f7c3d49cd0125157347fef7faedcb8 203 TIGRFAM TIGR03360 VI_minor_1: type VI secretion-associated protein, VC_A0118 family 18 203 4.0E-52 T 12-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 vfu_B01187 36f7c3d49cd0125157347fef7faedcb8 203 Pfam PF11319 Type VI secretion system VasI, EvfG, VC_A0118 20 203 2.5E-57 T 12-10-2018 IPR017738 Type VI secretion system-associated, VCA0118 vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF158544 103 215 4.45E-32 T 12-10-2018 IPR038072 GspK, central domain superfamily vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 Pfam PF03934 Type II secretion system (T2SS), protein K 33 319 1.0E-88 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:1.10.40.60 101 217 8.1E-88 T 12-10-2018 IPR038072 GspK, central domain superfamily vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 PIRSF PIRSF002786 2 330 6.2E-70 T 12-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:1.10.40.60 218 287 8.1E-88 T 12-10-2018 IPR038072 GspK, central domain superfamily vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF158544 217 285 8.11E-19 T 12-10-2018 IPR038072 GspK, central domain superfamily vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 SUPERFAMILY SSF54523 38 327 1.55E-37 T 12-10-2018 vfu_A00518 705b203f8df5a9b60ef89de7965cd41a 338 Gene3D G3DSA:3.30.1300.30 44 311 8.1E-88 T 12-10-2018 vfu_A02842 288414b613957d2eca52ad5e1b219420 367 Pfam PF11814 Peptidase_C39 like family 157 359 4.6E-80 T 12-10-2018 IPR021770 Protein of unknown function DUF3335 vfu_A02842 288414b613957d2eca52ad5e1b219420 367 SUPERFAMILY SSF55729 2 149 3.71E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A02842 288414b613957d2eca52ad5e1b219420 367 Pfam PF00583 Acetyltransferase (GNAT) family 31 123 2.9E-18 T 12-10-2018 IPR000182 GNAT domain vfu_A02842 288414b613957d2eca52ad5e1b219420 367 Gene3D G3DSA:3.40.630.30 1 151 6.2E-31 T 12-10-2018 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 88 111 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 391 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 66 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 338 359 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 268 289 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 236 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 206 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 329 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 451 472 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 420 3.4E-122 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 42 545 2.7E-215 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 270 324 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 SUPERFAMILY SSF81442 38 545 8.24E-196 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 Gene3D G3DSA:1.20.210.10 29 547 1.2E-221 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01101 12ce4fb5904ddf30001e436445904c37 547 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 50 492 3.6E-153 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 SUPERFAMILY SSF52540 244 464 7.48E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 SMART SM00382 277 473 4.4E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 SMART SM00382 24 211 4.6 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 Gene3D G3DSA:3.40.50.300 237 470 1.5E-41 T 12-10-2018 vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 Pfam PF00005 ABC transporter 269 420 3.4E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 Pfam PF00005 ABC transporter 22 157 8.4E-12 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 SUPERFAMILY SSF52540 39 226 2.84E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00603 18e3a2b715a88c148b65d2c9733bc442 482 Gene3D G3DSA:3.40.50.300 7 236 1.4E-28 T 12-10-2018 vfu_A01012 5bf2b88f2d648f8957293cbb46aec5e9 260 SUPERFAMILY SSF161098 56 238 1.15E-30 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01012 5bf2b88f2d648f8957293cbb46aec5e9 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 246 4.7E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01012 5bf2b88f2d648f8957293cbb46aec5e9 260 Gene3D G3DSA:1.10.3720.10 53 246 1.2E-25 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02464 cf76b31e75173acb16b6478b404f023e 401 Pfam PF07670 Nucleoside recognition 89 184 1.2E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_A02464 cf76b31e75173acb16b6478b404f023e 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 4.1E-72 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 vfu_A02464 cf76b31e75173acb16b6478b404f023e 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 397 1.5E-136 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 vfu_A02464 cf76b31e75173acb16b6478b404f023e 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 3.2E-25 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 vfu_B00784 3d3627af96308d1bb3c462144ed0c1b9 329 Gene3D G3DSA:2.60.200.20 4 106 8.0E-21 T 12-10-2018 vfu_B00784 3d3627af96308d1bb3c462144ed0c1b9 329 SUPERFAMILY SSF49879 13 100 4.78E-23 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 vfu_B00784 3d3627af96308d1bb3c462144ed0c1b9 329 Pfam PF00498 FHA domain 29 96 1.4E-17 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 vfu_B00784 3d3627af96308d1bb3c462144ed0c1b9 329 SMART SM00240 27 79 6.3E-8 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 SMART SM00418 134 210 3.8E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 Pfam PF12840 Helix-turn-helix domain 133 190 1.1E-6 T 12-10-2018 vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 Pfam PF00072 Response regulator receiver domain 6 111 9.3E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 SMART SM00448 3 114 1.5E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 Gene3D G3DSA:1.10.10.10 119 206 8.0E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 SUPERFAMILY SSF46785 132 205 3.72E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 SUPERFAMILY SSF52172 4 128 3.98E-34 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B01341 c3c807296a13afc342acf6861d0629b2 210 Gene3D G3DSA:3.40.50.2300 2 118 7.8E-30 T 12-10-2018 vfu_A01785 4eb8361d7c66af0d5225a5b3103d5f5e 459 PIRSF PIRSF019381 1 459 9.8E-199 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein vfu_A01785 4eb8361d7c66af0d5225a5b3103d5f5e 459 Pfam PF04317 YcjX-like family, DUF463 20 458 4.4E-187 T 12-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein vfu_A01357 fb1b49d7a574f963bfa9aa863175324a 144 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 142 4.2E-40 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 vfu_A01357 fb1b49d7a574f963bfa9aa863175324a 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 96 139 1.9E-9 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A01357 fb1b49d7a574f963bfa9aa863175324a 144 Pfam PF00460 Flagella basal body rod protein 9 32 3.5E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_B01127 cb4a786315c2c93a6fe1dcb8aa90d300 238 Gene3D G3DSA:3.90.79.10 3 158 6.2E-23 T 12-10-2018 vfu_B01127 cb4a786315c2c93a6fe1dcb8aa90d300 238 SUPERFAMILY SSF55811 2 156 7.69E-15 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A02090 103be0b7abf1326a32452651762c726a 410 Gene3D G3DSA:3.20.20.80 30 410 5.7E-146 T 12-10-2018 vfu_A02090 103be0b7abf1326a32452651762c726a 410 Pfam PF07745 Glycosyl hydrolase family 53 51 407 2.0E-123 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 vfu_A02090 103be0b7abf1326a32452651762c726a 410 SUPERFAMILY SSF51445 48 408 7.62E-95 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 51.123 T 12-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 Pfam PF00483 Nucleotidyl transferase 6 272 1.1E-70 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 12-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 Gene3D G3DSA:3.90.550.10 1 286 5.6E-94 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 Gene3D G3DSA:2.160.10.10 287 403 5.3E-34 T 12-10-2018 vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 SUPERFAMILY SSF53448 3 358 2.14E-79 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 SUPERFAMILY SSF51161 295 395 4.86E-18 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_B00329 6a1b23dc5bd96ae845c06ee766b777a3 408 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 378 1.2E-155 T 12-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 SUPERFAMILY SSF51445 5 475 1.61E-160 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 Gene3D G3DSA:3.20.20.80 1 478 2.5E-164 T 12-10-2018 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 4.1E-132 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 2.3E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.3E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 2.3E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.3E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.3E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 vfu_A01486 cfd1092ac2c016c4eeb7e186d344481c 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site vfu_B00068 84a2b07e79bc2bc62efb48038c867606 186 SMART SM01118 9 180 6.5E-16 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 vfu_B00068 84a2b07e79bc2bc62efb48038c867606 186 Pfam PF01928 CYTH domain 10 174 1.0E-21 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 vfu_B00068 84a2b07e79bc2bc62efb48038c867606 186 SUPERFAMILY SSF55154 9 178 7.36E-36 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 vfu_B00068 84a2b07e79bc2bc62efb48038c867606 186 Gene3D G3DSA:2.40.320.10 1 185 2.9E-45 T 12-10-2018 vfu_B00068 84a2b07e79bc2bc62efb48038c867606 186 TIGRFAM TIGR00318 cyaB: putative adenylyl cyclase CyaB 10 179 6.8E-19 T 12-10-2018 IPR008173 Adenylyl cyclase CyaB KEGG: 00230+4.6.1.1 vfu_B00068 84a2b07e79bc2bc62efb48038c867606 186 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 11 138 1.0E-9 T 12-10-2018 vfu_A02223 9f5572b68ae68eb9475b3018f2cf15c6 268 Gene3D G3DSA:3.20.20.70 1 268 3.8E-96 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02223 9f5572b68ae68eb9475b3018f2cf15c6 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.852 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A02223 9f5572b68ae68eb9475b3018f2cf15c6 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.1E-101 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A02223 9f5572b68ae68eb9475b3018f2cf15c6 268 SUPERFAMILY SSF51366 1 266 4.62E-92 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_A02223 9f5572b68ae68eb9475b3018f2cf15c6 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 6.9E-97 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_A02223 9f5572b68ae68eb9475b3018f2cf15c6 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 vfu_B00937 d370e08a3cb608f07901f71f38692c9e 168 SUPERFAMILY SSF52499 2 159 7.06E-44 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_B00937 d370e08a3cb608f07901f71f38692c9e 168 Gene3D G3DSA:3.40.50.850 1 167 2.6E-40 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_B00937 d370e08a3cb608f07901f71f38692c9e 168 Pfam PF00857 Isochorismatase family 4 159 1.9E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 Gene3D G3DSA:3.30.470.30 53 153 2.0E-52 T 12-10-2018 vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 Gene3D G3DSA:2.40.50.140 212 282 1.5E-11 T 12-10-2018 vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 SUPERFAMILY SSF56091 24 200 3.17E-36 T 12-10-2018 vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 SUPERFAMILY SSF50249 173 279 3.43E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 Gene3D G3DSA:3.30.1490.70 33 192 2.0E-52 T 12-10-2018 vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 Pfam PF14743 DNA ligase OB-like domain 215 279 9.9E-31 T 12-10-2018 IPR029319 DNA ligase, OB-like domain vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 12-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 vfu_A01855 418d6739c95bd50f2f20b1bf71d1f13b 282 Pfam PF01068 ATP dependent DNA ligase domain 115 200 2.9E-6 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 vfu_A00785 a2a897b677385a4838bb916b842fa29d 222 SUPERFAMILY SSF53098 123 202 2.73E-6 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00785 a2a897b677385a4838bb916b842fa29d 222 Gene3D G3DSA:3.30.420.10 87 214 9.2E-9 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_B00087 021e7326d99e75e0e2210e17c2cfca94 228 SUPERFAMILY SSF56281 18 226 8.79E-13 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_B00087 021e7326d99e75e0e2210e17c2cfca94 228 Pfam PF14234 Domain of unknown function (DUF4336) 7 148 6.8E-15 T 12-10-2018 IPR025638 Protein of unknown function DUF4336 vfu_A01642 d33fdc4b62e37ed1a6ca84a1a74f6c51 144 Pfam PF05232 Chlorhexidine efflux transporter 71 133 8.0E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter vfu_A01642 d33fdc4b62e37ed1a6ca84a1a74f6c51 144 Pfam PF05232 Chlorhexidine efflux transporter 1 65 1.0E-23 T 12-10-2018 IPR007896 Chlorhexidine efflux transporter vfu_A00331 e0c52016cc0f58bf06deb193c255ae16 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 65 6.0E-19 T 12-10-2018 vfu_A00331 e0c52016cc0f58bf06deb193c255ae16 92 Pfam PF00936 BMC domain 4 79 3.6E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00331 e0c52016cc0f58bf06deb193c255ae16 92 SMART SM00877 3 79 4.7E-35 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00331 e0c52016cc0f58bf06deb193c255ae16 92 SUPERFAMILY SSF143414 3 87 2.22E-31 T 12-10-2018 IPR037233 CcmK-like superfamily vfu_A00331 e0c52016cc0f58bf06deb193c255ae16 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 12-10-2018 IPR020808 Bacterial microcompartments protein, conserved site vfu_A00331 e0c52016cc0f58bf06deb193c255ae16 92 Gene3D G3DSA:3.30.70.1710 1 92 7.4E-39 T 12-10-2018 vfu_A00667 432d0de65b1d9e6770cea65469527334 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.273 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00667 432d0de65b1d9e6770cea65469527334 209 Gene3D G3DSA:2.40.30.10 129 209 5.6E-20 T 12-10-2018 vfu_A00667 432d0de65b1d9e6770cea65469527334 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.1E-95 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00667 432d0de65b1d9e6770cea65469527334 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site vfu_A00667 432d0de65b1d9e6770cea65469527334 209 Pfam PF00297 Ribosomal protein L3 94 182 1.4E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00667 432d0de65b1d9e6770cea65469527334 209 SUPERFAMILY SSF50447 1 208 1.5E-84 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily vfu_A00667 432d0de65b1d9e6770cea65469527334 209 Gene3D G3DSA:2.40.50.620 32 96 2.2E-15 T 12-10-2018 vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 Gene3D G3DSA:3.40.190.10 163 257 4.6E-38 T 12-10-2018 vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 SUPERFAMILY SSF53850 90 287 5.02E-25 T 12-10-2018 vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 8.4E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 Pfam PF03466 LysR substrate binding domain 89 281 3.2E-24 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 Gene3D G3DSA:3.40.190.10 96 261 4.6E-38 T 12-10-2018 vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 Gene3D G3DSA:1.10.10.10 1 86 3.4E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02186 2cde8e7fc6a91e433b9e8524c042e3ee 289 SUPERFAMILY SSF46785 4 112 9.53E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01677 a62aa62fb309e35679f476facacc5412 566 Gene3D G3DSA:1.10.3720.10 4 278 9.5E-18 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01677 a62aa62fb309e35679f476facacc5412 566 SUPERFAMILY SSF161098 300 538 2.22E-26 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01677 a62aa62fb309e35679f476facacc5412 566 Gene3D G3DSA:1.10.3720.10 298 548 3.1E-21 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01677 a62aa62fb309e35679f476facacc5412 566 SUPERFAMILY SSF161098 6 271 2.88E-21 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.0E-71 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 PIRSF PIRSF000193 3 270 8.6E-77 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 SUPERFAMILY SSF48179 163 270 9.18E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 Gene3D G3DSA:1.10.3730.10 165 272 8.7E-34 T 12-10-2018 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.648 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 SUPERFAMILY SSF51735 4 160 2.1E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 1.6E-29 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 Gene3D G3DSA:3.40.50.720 2 164 1.6E-51 T 12-10-2018 vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.9E-24 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal vfu_A03052 d42a4c773a51ff35542625ef0b26f129 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 Gene3D G3DSA:3.10.290.10 2 76 2.0E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 2.7E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 SUPERFAMILY SSF55174 17 69 4.88E-11 T 12-10-2018 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 SMART SM00363 18 83 4.4E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 SUPERFAMILY SSF55120 77 316 5.96E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 Gene3D G3DSA:3.30.2350.10 84 316 5.5E-73 T 12-10-2018 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 14 313 7.3E-106 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01007 379abffc1ff84b532f0e4b4d323074bb 324 Pfam PF01479 S4 domain 18 63 6.5E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A02973 db716150706e679cdb4199cdcd4f9313 77 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 2 74 4.8E-20 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 vfu_A02973 db716150706e679cdb4199cdcd4f9313 77 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 77 30.124 T 12-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 vfu_A02973 db716150706e679cdb4199cdcd4f9313 77 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 2 72 1.5E-19 T 12-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 5.0E-109 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Gene3D G3DSA:3.40.250.10 399 481 1.2E-10 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 3.7E-42 T 12-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 219.139 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Gene3D G3DSA:3.30.2130.30 1 174 8.6E-31 T 12-10-2018 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Gene3D G3DSA:3.40.50.620 175 398 2.3E-50 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.8E-71 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SUPERFAMILY SSF52402 174 372 1.85E-42 T 12-10-2018 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SUPERFAMILY SSF52821 399 481 4.71E-12 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SUPERFAMILY SSF143437 1 173 2.09E-45 T 12-10-2018 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 SMART SM00981 75 165 8.3E-23 T 12-10-2018 IPR004114 THUMP domain GO:0003723 vfu_A02691 9a87a7762bbfdfe9a9b9dc2b5d20b473 482 Pfam PF02926 THUMP domain 43 156 3.3E-22 T 12-10-2018 IPR004114 THUMP domain GO:0003723 vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 SUPERFAMILY SSF52172 3 144 3.42E-33 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 Gene3D G3DSA:2.40.50.40 152 223 1.7E-8 T 12-10-2018 vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 Pfam PF04397 LytTr DNA-binding domain 161 256 4.9E-22 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 SMART SM00850 160 256 1.5E-18 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 SMART SM00448 5 117 1.4E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 Gene3D G3DSA:3.40.50.2300 3 147 2.7E-33 T 12-10-2018 vfu_B00514 164546abb72b76cff6e80e4a61afacbb 256 Pfam PF00072 Response regulator receiver domain 8 115 2.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 449 520 7.4E-20 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 103 171 1.2E-7 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 190 260 1.2E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 19 87 4.9E-4 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 275 347 1.9E-27 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SMART SM00316 362 434 4.6E-21 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 6 98 6.0E-17 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PIRSF PIRSF002111 1 534 8.7E-218 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.3E-230 T 12-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 429 539 2.31E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 445 528 1.6E-19 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 99 178 1.6E-5 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 189 260 1.9E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 18 86 1.2E-6 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 275 347 5.1E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 362 434 2.1E-20 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 449 520 7.0E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 4 112 8.06E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 255 364 1.0E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 SUPERFAMILY SSF50249 347 438 8.21E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 187 268 5.6E-27 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 4.9E-97 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 358 444 1.4E-23 T 12-10-2018 vfu_A02423 ef5397b88af1de072d25321cce531f5a 556 Gene3D G3DSA:2.40.50.140 269 357 2.0E-31 T 12-10-2018 vfu_B01254 9b20d10506270595f5e7fff698597fc4 301 Pfam PF00892 EamA-like transporter family 153 283 2.5E-10 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01254 9b20d10506270595f5e7fff698597fc4 301 Pfam PF00892 EamA-like transporter family 8 135 2.6E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01254 9b20d10506270595f5e7fff698597fc4 301 SUPERFAMILY SSF103481 40 138 5.49E-11 T 12-10-2018 vfu_B01254 9b20d10506270595f5e7fff698597fc4 301 SUPERFAMILY SSF103481 186 285 2.48E-11 T 12-10-2018 vfu_B00426 747c14bccc16d0ef441b777b9037567a 191 Gene3D G3DSA:3.10.560.10 106 188 1.1E-14 T 12-10-2018 vfu_B00426 747c14bccc16d0ef441b777b9037567a 191 Pfam PF02563 Polysaccharide biosynthesis/export protein 40 113 1.4E-17 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 vfu_B00426 747c14bccc16d0ef441b777b9037567a 191 Pfam PF10531 SLBB domain 118 161 1.1E-13 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 Gene3D G3DSA:3.40.640.10 102 357 3.4E-125 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 SUPERFAMILY SSF53383 81 460 7.8E-39 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 460 142.732 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 Gene3D G3DSA:3.90.1150.110 20 446 3.4E-125 T 12-10-2018 vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 Pfam PF03841 L-seryl-tRNA selenium transferase 90 442 5.6E-94 T 12-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 Pfam PF12390 Selenocysteine synthase N terminal 19 56 7.3E-6 T 12-10-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 vfu_A02064 105106aef1ee1e6b81db879d5cdb21cf 467 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 19 454 4.5E-135 T 12-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.621 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 SMART SM01374 1 123 2.8E-86 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 6.2E-59 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 SUPERFAMILY SSF50193 2 122 1.09E-51 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 5.2E-55 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 vfu_A00677 bbd349748825f5f1aa4154209b749be1 123 Gene3D G3DSA:2.40.150.20 1 123 8.0E-57 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 SUPERFAMILY SSF53218 181 327 4.71E-42 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 SUPERFAMILY SSF63867 332 410 2.62E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 1.0E-24 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 1.5E-32 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 SMART SM00852 184 321 4.0E-41 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Gene3D G3DSA:2.170.190.11 53 145 5.6E-145 T 12-10-2018 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Gene3D G3DSA:3.40.980.10 179 331 5.6E-145 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Gene3D G3DSA:2.40.340.10 332 401 5.6E-145 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 SUPERFAMILY SSF63882 7 180 1.96E-55 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Gene3D G3DSA:3.90.105.10 31 178 5.6E-145 T 12-10-2018 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 8.0E-21 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_B00100 43176dee11d0257f43e4eb87f1aef374 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 2.8E-45 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_B00946 77aa2dc00a9f9423bc5ab5cd671deb4a 418 SUPERFAMILY SSF142764 3 415 1.83E-135 T 12-10-2018 vfu_B00946 77aa2dc00a9f9423bc5ab5cd671deb4a 418 Pfam PF07005 Putative sugar-binding N-terminal domain 3 227 1.0E-72 T 12-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain vfu_B00946 77aa2dc00a9f9423bc5ab5cd671deb4a 418 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 254 410 5.5E-42 T 12-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain vfu_B00946 77aa2dc00a9f9423bc5ab5cd671deb4a 418 Gene3D G3DSA:3.40.50.10840 2 235 3.0E-89 T 12-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily vfu_B00946 77aa2dc00a9f9423bc5ab5cd671deb4a 418 Gene3D G3DSA:3.40.980.20 242 418 2.2E-63 T 12-10-2018 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.7E-84 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 SUPERFAMILY SSF56059 83 347 3.03E-70 T 12-10-2018 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 SMART SM00878 336 441 6.2E-63 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 Gene3D G3DSA:3.40.50.20 1 85 9.2E-34 T 12-10-2018 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 Gene3D G3DSA:3.30.470.20 86 433 2.0E-155 T 12-10-2018 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 SUPERFAMILY SSF51246 331 444 8.89E-43 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 7.4E-38 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 3.3E-243 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 Gene3D G3DSA:3.30.1490.20 131 203 2.0E-155 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 SUPERFAMILY SSF52440 1 113 9.35E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.7E-43 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A00069 a956fba34b0e733f55789fdec20671c7 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 SUPERFAMILY SSF54211 4 134 1.71E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 Gene3D G3DSA:3.30.230.30 1 136 1.8E-49 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 3.3E-26 T 12-10-2018 IPR001498 Impact, N-terminal vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 201 1.7E-63 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 9.6E-11 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal vfu_A00359 ddcbeffc46cf8dbfb417db8433cefdc9 207 SUPERFAMILY SSF54980 139 203 1.38E-9 T 12-10-2018 IPR035647 EF-G domain III/V-like vfu_B01089 19bac1a65484466c5df10fd49f473200 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 133 2.9E-51 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 vfu_B01089 19bac1a65484466c5df10fd49f473200 141 Gene3D G3DSA:2.20.25.10 1 43 1.5E-20 T 12-10-2018 vfu_B01089 19bac1a65484466c5df10fd49f473200 141 Pfam PF02566 OsmC-like protein 38 131 7.7E-17 T 12-10-2018 IPR003718 OsmC/Ohr family vfu_B01089 19bac1a65484466c5df10fd49f473200 141 Gene3D G3DSA:3.30.300.20 44 139 1.1E-31 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_B01089 19bac1a65484466c5df10fd49f473200 141 SUPERFAMILY SSF82784 1 133 1.83E-40 T 12-10-2018 IPR036102 OsmC/Ohr superfamily vfu_B01119 b7ea3bc6ca3dd86bd3fde3e5f715c673 262 Pfam PF02567 Phenazine biosynthesis-like protein 6 257 3.4E-51 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 vfu_B01119 b7ea3bc6ca3dd86bd3fde3e5f715c673 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 259 5.3E-31 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 vfu_B01119 b7ea3bc6ca3dd86bd3fde3e5f715c673 262 PIRSF PIRSF016184 2 261 2.7E-47 T 12-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 vfu_B01119 b7ea3bc6ca3dd86bd3fde3e5f715c673 262 Gene3D G3DSA:3.10.310.10 117 249 1.2E-80 T 12-10-2018 vfu_B01119 b7ea3bc6ca3dd86bd3fde3e5f715c673 262 SUPERFAMILY SSF54506 2 260 3.84E-72 T 12-10-2018 vfu_B01119 b7ea3bc6ca3dd86bd3fde3e5f715c673 262 Gene3D G3DSA:3.10.310.10 4 253 1.2E-80 T 12-10-2018 vfu_B00649 3a377e4031eb4e8fe2860eea653277ad 114 Gene3D G3DSA:3.30.1360.20 15 114 6.5E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 vfu_B00649 3a377e4031eb4e8fe2860eea653277ad 114 SUPERFAMILY SSF55248 15 108 8.76E-33 T 12-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 vfu_B00649 3a377e4031eb4e8fe2860eea653277ad 114 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 14 109 21.982 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 vfu_B00649 3a377e4031eb4e8fe2860eea653277ad 114 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 16 107 3.8E-31 T 12-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.803 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 Gene3D G3DSA:3.30.930.10 109 465 5.0E-108 T 12-10-2018 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 Gene3D G3DSA:2.40.50.140 3 105 8.8E-20 T 12-10-2018 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 SUPERFAMILY SSF50249 15 101 4.71E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 2.6E-11 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 1.1E-80 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 SUPERFAMILY SSF55681 97 464 1.53E-94 T 12-10-2018 vfu_A01769 8eac2f7e511e7fad51472df7efd3f40f 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 1.3E-206 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 vfu_A03140 12df639cd8a941b2ad7a0d89ca7514eb 119 Gene3D G3DSA:3.30.1490.190 60 119 1.9E-17 T 12-10-2018 vfu_A03140 12df639cd8a941b2ad7a0d89ca7514eb 119 Pfam PF01475 Ferric uptake regulator family 3 108 9.6E-16 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 vfu_A03140 12df639cd8a941b2ad7a0d89ca7514eb 119 SUPERFAMILY SSF46785 2 114 6.35E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A03140 12df639cd8a941b2ad7a0d89ca7514eb 119 Gene3D G3DSA:1.10.10.10 1 59 1.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF51905 5 447 1.63E-73 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 PIRSF PIRSF000171 1 532 9.0E-39 T 12-10-2018 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:3.50.50.60 10 404 5.1E-153 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 Pfam PF00890 FAD binding domain 10 392 2.7E-100 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 1.4E-14 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF56425 238 353 1.18E-41 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 4.0E-212 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:3.90.700.10 248 358 5.1E-153 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 Gene3D G3DSA:1.20.58.100 425 536 1.7E-44 T 12-10-2018 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.6E-8 T 12-10-2018 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.6E-8 T 12-10-2018 vfu_A00829 be8ef7dfbf57ef2b4f315ee59d81480a 536 SUPERFAMILY SSF46977 425 525 3.92E-32 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01297 ffe09e5e7297f74922bb0121a718afde 291 SUPERFAMILY SSF103481 197 290 4.58E-5 T 12-10-2018 vfu_A01297 ffe09e5e7297f74922bb0121a718afde 291 SUPERFAMILY SSF103481 41 143 3.92E-8 T 12-10-2018 vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Gene3D G3DSA:1.25.40.10 197 284 2.6E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Pfam PF00085 Thioredoxin 8 109 6.2E-15 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 SUPERFAMILY SSF52833 3 113 1.33E-25 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Gene3D G3DSA:1.25.40.10 112 196 9.1E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Pfam PF14561 Tetratricopeptide repeat 195 284 3.8E-26 T 12-10-2018 vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Gene3D G3DSA:3.40.30.10 1 111 5.4E-23 T 12-10-2018 vfu_A02626 39cbc54a577a7f0cf7ae00dbfdd90fe7 284 Pfam PF14559 Tetratricopeptide repeat 124 190 3.6E-14 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 Gene3D G3DSA:3.40.50.1980 124 296 5.8E-41 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 Pfam PF01497 Periplasmic binding protein 39 273 1.2E-20 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 SUPERFAMILY SSF53807 37 294 8.83E-44 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 Gene3D G3DSA:3.40.50.1980 34 114 4.9E-22 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 87 102 1.5E-10 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 56 74 1.5E-10 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 1.5E-10 T 12-10-2018 vfu_A01423 5702c557fbae3d43f1dc5aaee7deaa45 300 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 212 230 1.5E-10 T 12-10-2018 vfu_B01440 1c2ed1b7daa7a7b83076ae1fa194b493 461 PIRSF PIRSF006066 6 461 2.4E-66 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B01440 1c2ed1b7daa7a7b83076ae1fa194b493 461 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 450 3.6E-79 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B01440 1c2ed1b7daa7a7b83076ae1fa194b493 461 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 55 456 9.3E-90 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A01340 91aa4c629def9ffafa832e47ea76743c 278 Gene3D G3DSA:3.40.50.1820 12 262 4.7E-71 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01340 91aa4c629def9ffafa832e47ea76743c 278 Pfam PF12697 Alpha/beta hydrolase family 23 255 4.1E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01340 91aa4c629def9ffafa832e47ea76743c 278 SUPERFAMILY SSF53474 17 261 2.04E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01340 91aa4c629def9ffafa832e47ea76743c 278 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 17 262 34.684 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 vfu_A01340 91aa4c629def9ffafa832e47ea76743c 278 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 20 261 4.0E-86 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Gene3D G3DSA:3.90.190.20 325 484 1.5E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Pfam PF08245 Mur ligase middle domain 127 307 2.4E-28 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 5.4E-29 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 SUPERFAMILY SSF51984 23 109 1.31E-28 T 12-10-2018 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 SUPERFAMILY SSF53623 108 323 2.62E-72 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 SUPERFAMILY SSF53244 326 474 8.24E-49 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Gene3D G3DSA:3.40.1190.10 111 324 1.0E-83 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Gene3D G3DSA:3.40.50.720 23 110 4.0E-34 T 12-10-2018 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 8.2E-22 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 7.7E-189 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_A02931 00c69702b6262af4f89d71ee6f042b6f 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.552 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 vfu_B01421 e346fa8d94e5b7006dbc00c560cf7eed 185 Gene3D G3DSA:3.40.30.10 1 184 3.5E-62 T 12-10-2018 vfu_B01421 e346fa8d94e5b7006dbc00c560cf7eed 185 PIRSF PIRSF000239 1 185 1.1E-51 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_B01421 e346fa8d94e5b7006dbc00c560cf7eed 185 Pfam PF00578 AhpC/TSA family 3 131 2.2E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_B01421 e346fa8d94e5b7006dbc00c560cf7eed 185 SUPERFAMILY SSF52833 2 184 1.87E-55 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B01421 e346fa8d94e5b7006dbc00c560cf7eed 185 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 154 179 1.4E-6 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_B01421 e346fa8d94e5b7006dbc00c560cf7eed 185 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 185 2.4E-104 T 12-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 SUPERFAMILY SSF52161 1 140 5.23E-61 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.8E-65 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.952 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 Gene3D G3DSA:3.90.1180.10 1 142 1.3E-64 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 Pfam PF00572 Ribosomal protein L13 15 138 8.9E-58 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 PIRSF PIRSF002181 1 142 5.6E-53 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 vfu_A02952 c58d4b2120817b9dcc717649ac20c6b4 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 SUPERFAMILY SSF48256 14 380 6.67E-125 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 130 143 1.2E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 256 276 1.2E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 181 196 1.2E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 313 329 1.2E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 333 347 1.2E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PRINTS PR00143 Citrate synthase signature 203 231 1.2E-36 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 Gene3D G3DSA:1.10.230.10 229 327 1.1E-118 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 1.9E-161 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 PIRSF PIRSF001369 8 381 9.7E-116 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 Gene3D G3DSA:1.10.580.10 36 360 1.1E-118 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 vfu_A01815 428a2f37d1b0718ed76f9a3dca15e553 381 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 4.6E-113 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00487 25 221 1.1E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:1.10.150.80 526 609 3.9E-28 T 12-10-2018 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF00270 DEAD/DEAH box helicase 31 188 6.7E-19 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 1.2E-191 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF16124 RecQ zinc-binding 346 407 6.3E-18 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SUPERFAMILY SSF52540 16 203 1.77E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 17 606 2.9E-253 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00341 533 609 5.5E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:3.40.50.300 213 408 4.8E-59 T 12-10-2018 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00956 414 517 1.9E-50 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SUPERFAMILY SSF52540 211 458 1.12E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:1.10.10.10 409 525 4.9E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF00570 HRDC domain 537 603 5.6E-22 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SUPERFAMILY SSF47819 534 608 5.01E-26 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF09382 RQC domain 409 517 9.2E-38 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Pfam PF00271 Helicase conserved C-terminal domain 230 333 2.2E-19 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 SMART SM00490 253 334 1.2E-26 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00219 52d018b8b3cb9889453a4a57a5878f00 611 Gene3D G3DSA:3.40.50.300 7 211 1.6E-82 T 12-10-2018 vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 SUPERFAMILY SSF48295 2 96 6.28E-29 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 6 91 1.0E-30 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 PIRSF PIRSF003196 1 97 7.5E-37 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 TIGRFAM TIGR01321 TrpR: trp operon repressor 1 83 4.1E-25 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 Hamap MF_00475 Trp operon repressor [trpR]. 6 97 20.495 T 12-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 Gene3D G3DSA:1.10.1270.10 1 97 2.2E-33 T 12-10-2018 IPR038116 TrpR-like superfamily vfu_A00999 c0ca23db9d8c07c6bd00847d1817fa60 97 Pfam PF01371 Trp repressor protein 9 94 8.5E-31 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 SUPERFAMILY SSF54719 88 200 3.27E-43 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 1.4E-25 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 Gene3D G3DSA:1.10.287.990 20 85 1.2E-23 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 PIRSF PIRSF000349 1 204 5.2E-77 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 4.1E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 4.1E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.1E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.1E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 4.1E-22 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 SUPERFAMILY SSF46609 1 86 3.01E-28 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 Gene3D G3DSA:2.40.500.20 90 205 1.4E-46 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00571 0817184d25cacce6be35abc2ca2cfade 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 9.4E-39 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 Gene3D G3DSA:3.40.50.300 217 414 1.2E-50 T 12-10-2018 vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 414 50.043 T 12-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 SUPERFAMILY SSF52540 76 358 9.77E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 Gene3D G3DSA:3.40.50.300 1 211 3.2E-71 T 12-10-2018 vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.4E-46 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 SMART SM00487 22 222 4.5E-55 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 Pfam PF00271 Helicase conserved C-terminal domain 234 341 3.7E-32 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00957 9533a4548c39a4642bd65bbad4a45c25 414 SMART SM00490 260 341 3.7E-30 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02419 753d24be456e0624127d4512864c7a9c 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A02419 753d24be456e0624127d4512864c7a9c 231 SUPERFAMILY SSF51366 3 229 1.44E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_A02419 753d24be456e0624127d4512864c7a9c 231 SMART SM00934 5 226 3.9E-101 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A02419 753d24be456e0624127d4512864c7a9c 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 2.0E-58 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A02419 753d24be456e0624127d4512864c7a9c 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.078 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A02419 753d24be456e0624127d4512864c7a9c 231 Gene3D G3DSA:3.20.20.70 1 230 6.1E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02419 753d24be456e0624127d4512864c7a9c 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 224 1.5E-51 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 Gene3D G3DSA:3.75.10.10 6 403 5.5E-147 T 12-10-2018 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.544 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 8.7E-162 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PIRSF PIRSF006356 1 406 3.4E-151 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 SUPERFAMILY SSF55909 3 406 2.14E-130 T 12-10-2018 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.6E-45 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.6E-45 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.6E-45 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.6E-45 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.6E-45 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.6E-45 T 12-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 Gene3D G3DSA:1.10.3930.10 68 148 5.5E-147 T 12-10-2018 vfu_A00563 98bd1d229ff1e405adce4514cc7e2f40 406 Pfam PF02274 Amidinotransferase 19 403 3.1E-109 T 12-10-2018 vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 Gene3D G3DSA:3.40.50.300 315 527 2.2E-22 T 12-10-2018 vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 129 237 1.3E-9 T 12-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 SUPERFAMILY SSF52540 290 571 8.7E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 Pfam PF04851 Type III restriction enzyme, res subunit 315 475 2.3E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 SMART SM00487 311 547 2.2E-8 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 Gene3D G3DSA:3.40.50.300 548 785 4.8E-23 T 12-10-2018 vfu_A02739 3921a1128b1d8024453b8c7462d7fec5 1087 Gene3D G3DSA:3.90.1570.50 111 202 1.3E-5 T 12-10-2018 vfu_B00155 6676f4d70aa2a28d32732f6907a21e06 370 SUPERFAMILY SSF140931 95 293 1.57E-38 T 12-10-2018 IPR036597 Fido-like domain superfamily vfu_B00155 6676f4d70aa2a28d32732f6907a21e06 370 SUPERFAMILY SSF46785 290 364 5.75E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00155 6676f4d70aa2a28d32732f6907a21e06 370 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 2.3E-30 T 12-10-2018 IPR025230 Domain of unknown function DUF4172 vfu_B00155 6676f4d70aa2a28d32732f6907a21e06 370 Pfam PF02661 Fic/DOC family 111 223 1.2E-16 T 12-10-2018 IPR003812 Fido domain vfu_B00155 6676f4d70aa2a28d32732f6907a21e06 370 Gene3D G3DSA:1.10.10.10 279 367 1.1E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00155 6676f4d70aa2a28d32732f6907a21e06 370 Gene3D G3DSA:1.10.3290.10 34 278 1.8E-40 T 12-10-2018 IPR036597 Fido-like domain superfamily vfu_A03056 9bc6c092907ea6e6ee1be08d8e672ed6 199 Gene3D G3DSA:3.90.950.10 1 198 3.3E-84 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A03056 9bc6c092907ea6e6ee1be08d8e672ed6 199 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 51.876 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 vfu_A03056 9bc6c092907ea6e6ee1be08d8e672ed6 199 SUPERFAMILY SSF52972 1 195 4.45E-75 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A03056 9bc6c092907ea6e6ee1be08d8e672ed6 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 9.7E-66 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 vfu_A03056 9bc6c092907ea6e6ee1be08d8e672ed6 199 Pfam PF01725 Ham1 family 4 192 2.0E-58 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 vfu_B00765 b260c567c2de0a6be0e0091fabb3e9f9 476 Pfam PF12268 Protein of unknown function (DUF3612) 298 472 7.1E-104 T 12-10-2018 IPR022055 Protein of unknown function DUF3612 vfu_B00765 b260c567c2de0a6be0e0091fabb3e9f9 476 Gene3D G3DSA:1.10.260.40 2 66 1.0E-7 T 12-10-2018 vfu_B00765 b260c567c2de0a6be0e0091fabb3e9f9 476 Pfam PF01381 Helix-turn-helix 18 51 4.4E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_B00765 b260c567c2de0a6be0e0091fabb3e9f9 476 SUPERFAMILY SSF47413 18 58 1.48E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00765 b260c567c2de0a6be0e0091fabb3e9f9 476 Pfam PF06114 IrrE N-terminal-like domain 167 297 1.6E-5 T 12-10-2018 IPR010359 IrrE N-terminal-like domain vfu_B01412 2a4fbce46ec3a96c05a3a05bcb695e8f 309 Pfam PF00892 EamA-like transporter family 158 293 3.3E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01412 2a4fbce46ec3a96c05a3a05bcb695e8f 309 Pfam PF00892 EamA-like transporter family 8 143 2.2E-24 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01412 2a4fbce46ec3a96c05a3a05bcb695e8f 309 SUPERFAMILY SSF103481 42 146 1.03E-12 T 12-10-2018 vfu_B01412 2a4fbce46ec3a96c05a3a05bcb695e8f 309 SUPERFAMILY SSF103481 218 294 5.36E-9 T 12-10-2018 vfu_A03061 bee20447e2c1bcf65626f0fedf731dce 256 SUPERFAMILY SSF52540 8 223 1.16E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03061 bee20447e2c1bcf65626f0fedf731dce 256 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A03061 bee20447e2c1bcf65626f0fedf731dce 256 Gene3D G3DSA:3.40.50.300 5 249 1.7E-59 T 12-10-2018 vfu_A03061 bee20447e2c1bcf65626f0fedf731dce 256 Pfam PF00005 ABC transporter 23 157 1.5E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A03061 bee20447e2c1bcf65626f0fedf731dce 256 SMART SM00382 31 208 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 SUPERFAMILY SSF47240 2 156 4.72E-45 T 12-10-2018 IPR009078 Ferritin-like superfamily vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 Pfam PF00210 Ferritin-like domain 19 156 1.1E-26 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 2.8E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 2.8E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 2.8E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 PIRSF PIRSF005900 1 156 4.9E-46 T 12-10-2018 IPR002177 DNA-binding protein Dps vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 Gene3D G3DSA:1.20.1260.10 1 156 5.1E-58 T 12-10-2018 IPR012347 Ferritin-like vfu_A00455 1e84a19398b3aaaeb687876293af0305 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 Hamap MF_00017 Recombination protein RecR [recR]. 1 194 102.084 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 Gene3D G3DSA:3.40.1360.10 73 194 4.6E-38 T 12-10-2018 vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 Pfam PF13662 Toprim domain 77 167 8.0E-23 T 12-10-2018 IPR006171 TOPRIM domain vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 Pfam PF02132 RecR protein 36 72 1.8E-15 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 TIGRFAM TIGR00615 recR: recombination protein RecR 2 192 2.9E-76 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 Gene3D G3DSA:1.10.8.420 1 47 3.3E-18 T 12-10-2018 vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 SUPERFAMILY SSF111304 2 194 1.02E-70 T 12-10-2018 IPR023627 Recombination protein RecR vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 ProSitePatterns PS01300 RecR protein signature. 52 73 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 vfu_A02543 78dc5e16b60ef41de8581c4788322eb4 194 SMART SM00493 76 161 2.4E-17 T 12-10-2018 IPR006171 TOPRIM domain vfu_A00651 ee4c09adb5108b36c54ffdfd47b0b96f 325 PIRSF PIRSF005211 1 325 5.1E-105 T 12-10-2018 IPR012020 AB hydrolase 4 family vfu_A00651 ee4c09adb5108b36c54ffdfd47b0b96f 325 SUPERFAMILY SSF53474 30 299 3.81E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00651 ee4c09adb5108b36c54ffdfd47b0b96f 325 Pfam PF00561 alpha/beta hydrolase fold 61 301 1.0E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A03099 cf3c4f859d9c7790301fbd46c876f5cc 162 Pfam PF04093 rod shape-determining protein MreD 8 154 6.9E-42 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 vfu_A03099 cf3c4f859d9c7790301fbd46c876f5cc 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 1.7E-37 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 vfu_A03099 cf3c4f859d9c7790301fbd46c876f5cc 162 PIRSF PIRSF018472 1 162 2.4E-43 T 12-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 SUPERFAMILY SSF46785 2 85 1.79E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 SUPERFAMILY SSF53850 97 291 6.52E-30 T 12-10-2018 vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 Gene3D G3DSA:1.10.10.10 4 87 2.9E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 Pfam PF03466 LysR substrate binding domain 91 286 6.6E-26 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 5.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 Gene3D G3DSA:3.40.190.10 98 285 2.4E-43 T 12-10-2018 vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.1E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00849 af36a6ab2e262990908bcdc22bd2d151 295 Gene3D G3DSA:3.40.190.10 160 259 2.4E-43 T 12-10-2018 vfu_A01510 e948c814cdf4efbbb623dd2d641190a8 127 Pfam PF04342 Putative member of DMT superfamily (DUF486) 10 114 8.7E-45 T 12-10-2018 IPR007437 Protein of unknown function DUF486 vfu_A01510 e948c814cdf4efbbb623dd2d641190a8 127 PIRSF PIRSF021239 4 117 8.1E-53 T 12-10-2018 IPR007437 Protein of unknown function DUF486 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 Pfam PF08402 TOBE domain 292 372 3.1E-10 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 Gene3D G3DSA:3.40.50.300 17 235 1.0E-68 T 12-10-2018 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 Pfam PF00005 ABC transporter 35 174 2.9E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 SUPERFAMILY SSF50331 250 373 2.04E-9 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 Gene3D G3DSA:2.40.50.940 236 298 1.1E-11 T 12-10-2018 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 1.3E-155 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 SUPERFAMILY SSF52540 18 256 1.26E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 SMART SM00382 42 225 8.9E-20 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01894 77ddbc6d25d5d7585a995a28fabd8cf0 378 Gene3D G3DSA:2.40.50.140 299 317 1.1E-11 T 12-10-2018 vfu_A02580 148123ad16afb54844d169b0cf07a00f 112 Gene3D G3DSA:1.20.120.160 1 111 3.1E-20 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A02580 148123ad16afb54844d169b0cf07a00f 112 Pfam PF01627 Hpt domain 24 81 1.3E-7 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A02580 148123ad16afb54844d169b0cf07a00f 112 SUPERFAMILY SSF47226 2 110 2.36E-19 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 SMART SM00866 90 229 2.2E-33 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 SMART SM00345 10 69 3.8E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.6E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 Pfam PF07702 UTRA domain 92 229 7.3E-36 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 SUPERFAMILY SSF64288 59 236 6.12E-47 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 2.5E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 Gene3D G3DSA:3.40.1410.10 73 233 1.5E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 Gene3D G3DSA:1.10.10.10 2 69 1.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01211 8b7da2ace5c1209ce7ad9fc2a2f34e0f 239 SUPERFAMILY SSF46785 3 73 1.3E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02815 ad0a3ef1281ee0639e587447b46ad563 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 1.6E-20 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal vfu_A02815 ad0a3ef1281ee0639e587447b46ad563 466 Gene3D G3DSA:2.40.30.10 367 453 5.6E-8 T 12-10-2018 vfu_A02815 ad0a3ef1281ee0639e587447b46ad563 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 vfu_A02815 ad0a3ef1281ee0639e587447b46ad563 466 Pfam PF01136 Peptidase family U32 80 355 2.8E-95 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 vfu_A00110 e668f195f504e31d12d9c66b52fceddc 358 Gene3D G3DSA:3.40.47.10 1 355 2.5E-106 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A00110 e668f195f504e31d12d9c66b52fceddc 358 SUPERFAMILY SSF53901 7 344 7.13E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A00110 e668f195f504e31d12d9c66b52fceddc 358 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 255 344 1.1E-23 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A00110 e668f195f504e31d12d9c66b52fceddc 358 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 193 1.0E-21 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 vfu_A01110 88585d54f21f49302d9cf3116b569287 332 Pfam PF00691 OmpA family 223 317 7.7E-24 T 12-10-2018 IPR006665 OmpA-like domain vfu_A01110 88585d54f21f49302d9cf3116b569287 332 SUPERFAMILY SSF56925 19 172 2.17E-32 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A01110 88585d54f21f49302d9cf3116b569287 332 Gene3D G3DSA:3.30.1330.60 196 329 8.5E-44 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01110 88585d54f21f49302d9cf3116b569287 332 PRINTS PR01021 OMPA domain signature 268 284 7.9E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01110 88585d54f21f49302d9cf3116b569287 332 PRINTS PR01021 OMPA domain signature 253 268 7.9E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01110 88585d54f21f49302d9cf3116b569287 332 PRINTS PR01021 OMPA domain signature 223 245 7.9E-12 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01110 88585d54f21f49302d9cf3116b569287 332 Gene3D G3DSA:2.40.160.20 5 195 2.6E-45 T 12-10-2018 vfu_A01110 88585d54f21f49302d9cf3116b569287 332 Pfam PF01389 OmpA-like transmembrane domain 20 172 2.2E-37 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 vfu_A01110 88585d54f21f49302d9cf3116b569287 332 SUPERFAMILY SSF103088 197 323 1.57E-36 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 338 3.8E-58 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 599 642 9.8E-10 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 1.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 1.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 406 423 1.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 1.2E-8 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01130 7bdba50ad386dcdad973b69f4332367b 644 SUPERFAMILY SSF64518 169 642 1.7E-24 T 12-10-2018 vfu_A00422 09c92b68ab3b43a3ebb3cc87c2bed938 142 SUPERFAMILY SSF55729 1 126 3.66E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00422 09c92b68ab3b43a3ebb3cc87c2bed938 142 Pfam PF00583 Acetyltransferase (GNAT) family 35 107 2.1E-5 T 12-10-2018 IPR000182 GNAT domain vfu_A00422 09c92b68ab3b43a3ebb3cc87c2bed938 142 Gene3D G3DSA:3.40.630.30 1 139 5.4E-14 T 12-10-2018 vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 268 2.7E-23 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 Gene3D G3DSA:3.40.190.10 40 271 4.8E-48 T 12-10-2018 vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 SUPERFAMILY SSF53850 40 277 8.15E-34 T 12-10-2018 vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 Gene3D G3DSA:1.10.530.10 296 469 2.8E-33 T 12-10-2018 vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 SUPERFAMILY SSF53955 267 454 4.05E-31 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 Pfam PF01464 Transglycosylase SLT domain 304 416 5.4E-16 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 Gene3D G3DSA:3.40.190.10 133 237 4.8E-48 T 12-10-2018 vfu_A01005 b69d0b455a19850fcb281e500ffa19e5 481 SMART SM00062 44 280 1.7E-10 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A01467 482ba512628f82bc201b01132fcc7747 295 Gene3D G3DSA:1.10.1200.10 207 285 4.8E-19 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01467 482ba512628f82bc201b01132fcc7747 295 Pfam PF00550 Phosphopantetheine attachment site 222 276 2.4E-5 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01467 482ba512628f82bc201b01132fcc7747 295 SUPERFAMILY SSF52499 1 208 3.01E-58 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 Gene3D G3DSA:3.40.50.850 1 206 4.2E-76 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 SUPERFAMILY SSF47336 213 288 3.66E-8 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PIRSF PIRSF001111 1 289 6.5E-122 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 63 80 6.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 183 200 6.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 80 99 6.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 109 131 6.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 165 183 6.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 PRINTS PR01398 Isochorismatase signature 2 14 6.8E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 vfu_A01467 482ba512628f82bc201b01132fcc7747 295 Pfam PF00857 Isochorismatase family 32 201 4.1E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 vfu_A03088 b09afbf3a52b7bfcda547bcbed30c91c 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 9.9E-69 T 12-10-2018 IPR021814 Protein of unknown function DUF3394 vfu_A03088 b09afbf3a52b7bfcda547bcbed30c91c 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 135 667 2.7E-78 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_A03088 b09afbf3a52b7bfcda547bcbed30c91c 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 724 3.6E-212 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 SUPERFAMILY SSF50891 1 162 6.14E-58 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 Gene3D G3DSA:2.40.100.10 1 164 1.6E-64 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 159 9.1E-48 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 PIRSF PIRSF001467 1 163 4.5E-29 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 7.7E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 7.7E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_A02355 6317e5148641a7eaaba2d7f4a10846ec 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 7.7E-12 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 vfu_B00705 b01b6989f121b3ffeff6555094350387 315 SMART SM00448 16 128 2.6E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00705 b01b6989f121b3ffeff6555094350387 315 Pfam PF00072 Response regulator receiver domain 18 128 2.3E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00705 b01b6989f121b3ffeff6555094350387 315 Gene3D G3DSA:3.30.70.270 136 311 1.1E-53 T 12-10-2018 vfu_B00705 b01b6989f121b3ffeff6555094350387 315 SMART SM00267 134 310 6.7E-59 T 12-10-2018 IPR000160 GGDEF domain vfu_B00705 b01b6989f121b3ffeff6555094350387 315 SUPERFAMILY SSF55073 150 309 5.34E-44 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00705 b01b6989f121b3ffeff6555094350387 315 Pfam PF00990 Diguanylate cyclase, GGDEF domain 145 306 4.3E-47 T 12-10-2018 IPR000160 GGDEF domain vfu_B00705 b01b6989f121b3ffeff6555094350387 315 SUPERFAMILY SSF52172 15 143 1.14E-40 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00705 b01b6989f121b3ffeff6555094350387 315 Gene3D G3DSA:3.40.50.2300 10 135 6.9E-39 T 12-10-2018 vfu_B00705 b01b6989f121b3ffeff6555094350387 315 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 142 309 1.6E-51 T 12-10-2018 IPR000160 GGDEF domain vfu_A02358 5e95567cbd18f963da40c99a993e1b5f 157 Gene3D G3DSA:3.10.450.50 1 157 3.2E-51 T 12-10-2018 vfu_A02358 5e95567cbd18f963da40c99a993e1b5f 157 Pfam PF02810 SEC-C motif 138 156 1.2E-10 T 12-10-2018 IPR004027 SEC-C motif vfu_A02358 5e95567cbd18f963da40c99a993e1b5f 157 Pfam PF02810 SEC-C motif 3 18 1.5E-4 T 12-10-2018 IPR004027 SEC-C motif vfu_A02358 5e95567cbd18f963da40c99a993e1b5f 157 SUPERFAMILY SSF103642 135 156 7.03E-9 T 12-10-2018 vfu_A02358 5e95567cbd18f963da40c99a993e1b5f 157 SUPERFAMILY SSF54427 24 127 2.63E-31 T 12-10-2018 IPR032710 NTF2-like domain superfamily vfu_A00596 8aab47ea0c4551cf394ff9d16773cd5b 256 Gene3D G3DSA:3.20.20.70 1 256 3.7E-100 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00596 8aab47ea0c4551cf394ff9d16773cd5b 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00596 8aab47ea0c4551cf394ff9d16773cd5b 256 Pfam PF00121 Triosephosphate isomerase 5 247 8.0E-87 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00596 8aab47ea0c4551cf394ff9d16773cd5b 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.5E-76 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00596 8aab47ea0c4551cf394ff9d16773cd5b 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 59.162 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A00596 8aab47ea0c4551cf394ff9d16773cd5b 256 SUPERFAMILY SSF51351 2 250 2.88E-89 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A01870 b49018e064726bd9b08cfeb790616706 236 SUPERFAMILY SSF52540 5 216 4.3E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01870 b49018e064726bd9b08cfeb790616706 236 SMART SM00382 29 201 6.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01870 b49018e064726bd9b08cfeb790616706 236 Gene3D G3DSA:3.40.50.300 4 234 8.0E-52 T 12-10-2018 vfu_A01870 b49018e064726bd9b08cfeb790616706 236 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01870 b49018e064726bd9b08cfeb790616706 236 Pfam PF00005 ABC transporter 25 164 2.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 SUPERFAMILY SSF52029 185 376 4.88E-79 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 Gene3D G3DSA:1.10.560.10 8 480 5.0E-215 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 480 8.7E-230 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 Gene3D G3DSA:1.10.560.10 482 548 9.5E-27 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 545 5.3E-98 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 Gene3D G3DSA:3.30.260.10 136 410 5.0E-215 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-70 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 SUPERFAMILY SSF48592 7 543 4.09E-75 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 Hamap MF_00600 60 kDa chaperonin [groL]. 2 552 39.626 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 Gene3D G3DSA:3.50.7.10 192 372 5.0E-215 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily vfu_B00631 80f831a69c19b91b92dcc162ad6640ff 552 SUPERFAMILY SSF54849 137 202 9.39E-24 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily vfu_A02748 060a445d740fec643ec5016fae20f5e0 337 Gene3D G3DSA:3.30.1330.60 227 328 1.2E-12 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02748 060a445d740fec643ec5016fae20f5e0 337 SUPERFAMILY SSF103088 224 305 2.09E-14 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02748 060a445d740fec643ec5016fae20f5e0 337 Pfam PF01389 OmpA-like transmembrane domain 64 188 9.3E-5 T 12-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 vfu_A02748 060a445d740fec643ec5016fae20f5e0 337 SUPERFAMILY SSF56925 31 184 5.76E-8 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A02748 060a445d740fec643ec5016fae20f5e0 337 Gene3D G3DSA:2.40.160.20 19 209 1.2E-11 T 12-10-2018 vfu_A02748 060a445d740fec643ec5016fae20f5e0 337 Pfam PF00691 OmpA family 233 306 1.4E-13 T 12-10-2018 IPR006665 OmpA-like domain vfu_A02702 ce9c01d8273d408693959c14480fd01e 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 19 146 3.5E-48 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 vfu_A02702 ce9c01d8273d408693959c14480fd01e 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 30.331 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 vfu_A02496 c2db8dc9213eb3118f1bb07e9d40afa2 203 SUPERFAMILY SSF69255 10 84 2.17E-8 T 12-10-2018 vfu_A02496 c2db8dc9213eb3118f1bb07e9d40afa2 203 SUPERFAMILY SSF69349 76 161 1.57E-6 T 12-10-2018 vfu_A01948 0638dbdd788d0c8665796bdf0e320dd5 160 Gene3D G3DSA:3.30.70.990 9 94 6.0E-28 T 12-10-2018 IPR035570 UPF0234, N-terminal vfu_A01948 0638dbdd788d0c8665796bdf0e320dd5 160 SUPERFAMILY SSF89963 88 160 1.86E-28 T 12-10-2018 IPR036183 YajQ-like superfamily vfu_A01948 0638dbdd788d0c8665796bdf0e320dd5 160 Gene3D G3DSA:3.30.70.860 95 160 5.1E-30 T 12-10-2018 IPR035571 UPF0234-like, C-terminal vfu_A01948 0638dbdd788d0c8665796bdf0e320dd5 160 SUPERFAMILY SSF89963 2 85 5.62E-31 T 12-10-2018 IPR036183 YajQ-like superfamily vfu_A01948 0638dbdd788d0c8665796bdf0e320dd5 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 1.1E-63 T 12-10-2018 IPR007551 Protein of unknown function DUF520 vfu_A01948 0638dbdd788d0c8665796bdf0e320dd5 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 29.459 T 12-10-2018 IPR007551 Protein of unknown function DUF520 vfu_A01596 8f43a4bcb95010fbe485d5ee6707184c 245 SUPERFAMILY SSF51366 1 242 9.42E-63 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_A01596 8f43a4bcb95010fbe485d5ee6707184c 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 8.2E-78 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 vfu_A01596 8f43a4bcb95010fbe485d5ee6707184c 245 Pfam PF00977 Histidine biosynthesis protein 1 234 5.1E-75 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 vfu_A01596 8f43a4bcb95010fbe485d5ee6707184c 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.504 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 vfu_A01596 8f43a4bcb95010fbe485d5ee6707184c 245 Gene3D G3DSA:3.20.20.70 1 245 1.0E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 SMART SM01049 38 132 6.3E-41 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 SMART SM00283 284 545 6.6E-68 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 Gene3D G3DSA:3.30.450.20 37 192 8.6E-63 T 12-10-2018 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 Gene3D G3DSA:1.10.287.950 215 546 3.7E-70 T 12-10-2018 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 511 1.5E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 SUPERFAMILY SSF58104 237 546 3.14E-73 T 12-10-2018 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 Pfam PF17200 Single Cache domain 2 42 189 1.2E-46 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 Pfam PF00672 HAMP domain 224 266 1.6E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00073 5833f0c9e4c0a395fd25dd4a94e10d97 546 SMART SM00304 215 269 4.0E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 Pfam PF03466 LysR substrate binding domain 91 291 4.8E-20 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 Gene3D G3DSA:3.40.190.10 167 266 2.7E-44 T 12-10-2018 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 SUPERFAMILY SSF53850 87 292 7.96E-34 T 12-10-2018 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 SUPERFAMILY SSF46785 2 81 6.56E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.1E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 Gene3D G3DSA:3.40.190.10 89 290 2.7E-44 T 12-10-2018 vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 Gene3D G3DSA:1.10.10.10 1 86 4.8E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01294 cfaae7714d6d12cc891e3f10a5da9738 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 Gene3D G3DSA:3.40.190.290 113 315 4.7E-55 T 12-10-2018 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 Gene3D G3DSA:1.10.10.10 23 112 2.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 84 2.1E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 SUPERFAMILY SSF46785 25 134 1.86E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 8.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 8.2E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 SUPERFAMILY SSF53850 111 320 1.34E-39 T 12-10-2018 vfu_A01796 b177d6b69135da0fe7f5d8582f2c77a3 335 Pfam PF03466 LysR substrate binding domain 110 316 5.0E-36 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 SUPERFAMILY SSF52172 1 118 1.85E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.7E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 Gene3D G3DSA:3.40.50.2300 1 122 4.4E-37 T 12-10-2018 vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 Gene3D G3DSA:1.10.10.10 123 219 5.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 Pfam PF00072 Response regulator receiver domain 3 113 6.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 SUPERFAMILY SSF46894 119 217 9.92E-27 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 SMART SM00862 145 216 7.1E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01709 2eebbac7f98dfc258911fb0dde6b2e13 219 SMART SM00448 1 112 2.3E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02363 42835af909b6952922938caea89bc576 53 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 1.1E-23 T 12-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 Gene3D G3DSA:3.40.50.920 193 325 2.6E-42 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 SUPERFAMILY SSF52922 190 323 3.53E-37 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.5E-48 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 Gene3D G3DSA:3.40.50.970 1 192 4.8E-75 T 12-10-2018 vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 SMART SM00861 4 179 7.8E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 SUPERFAMILY SSF52518 4 189 6.42E-65 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_B01464 6baea0afbd06da1095b0e2a576ff236b 327 Pfam PF02780 Transketolase, C-terminal domain 198 315 5.9E-38 T 12-10-2018 IPR033248 Transketolase, C-terminal domain vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.199 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 Gene3D G3DSA:2.60.15.10 4 91 3.4E-30 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 SUPERFAMILY SSF46604 89 138 1.57E-14 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 1.0E-38 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 6.0E-11 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 SUPERFAMILY SSF51344 5 87 1.01E-23 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 2.2E-28 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 Gene3D G3DSA:1.20.5.440 92 135 7.1E-19 T 12-10-2018 vfu_A00351 476bedb7e67329e5216f31c7620062ae 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 5.9E-43 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 vfu_B00061 764301d68b37eedfba86b3fdbf6ab25d 212 SUPERFAMILY SSF53335 6 188 7.03E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00061 764301d68b37eedfba86b3fdbf6ab25d 212 Pfam PF13649 Methyltransferase domain 48 138 1.7E-13 T 12-10-2018 vfu_B00061 764301d68b37eedfba86b3fdbf6ab25d 212 Gene3D G3DSA:3.40.50.150 11 182 7.4E-27 T 12-10-2018 vfu_A00813 51655a7d168e0d156b73b990fe195ba6 604 Pfam PF00501 AMP-binding enzyme 14 466 4.1E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A00813 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:3.40.50.12780 1 316 6.8E-53 T 12-10-2018 vfu_A00813 51655a7d168e0d156b73b990fe195ba6 604 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A00813 51655a7d168e0d156b73b990fe195ba6 604 SUPERFAMILY SSF56801 7 596 5.23E-113 T 12-10-2018 vfu_A00813 51655a7d168e0d156b73b990fe195ba6 604 Gene3D G3DSA:3.40.50.12780 320 459 1.5E-33 T 12-10-2018 vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 SMART SM00267 358 526 6.9E-31 T 12-10-2018 IPR000160 GGDEF domain vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 Gene3D G3DSA:3.30.70.270 356 525 5.8E-42 T 12-10-2018 vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 SUPERFAMILY SSF48452 39 191 8.67E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 Gene3D G3DSA:1.25.40.10 31 340 2.8E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 SUPERFAMILY SSF55073 374 524 1.06E-34 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 522 6.2E-33 T 12-10-2018 IPR000160 GGDEF domain vfu_B01059 8e10088eec113ba8a71c86f03d9e13f9 526 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 366 524 2.0E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_A02091 263176e9ea831f73bf628d9d4e6bc62b 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 274 2.7E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02091 263176e9ea831f73bf628d9d4e6bc62b 281 SUPERFAMILY SSF161098 6 281 1.4E-68 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02091 263176e9ea831f73bf628d9d4e6bc62b 281 Gene3D G3DSA:1.10.3720.10 1 268 7.4E-63 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 477 4.3E-34 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 SUPERFAMILY SSF55785 13 107 4.89E-25 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 105 2.0E-11 T 12-10-2018 IPR000014 PAS domain vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 SMART SM00283 250 511 1.6E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 SMART SM00091 1 68 0.0085 T 12-10-2018 IPR000014 PAS domain vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 Pfam PF08447 PAS fold 24 107 2.7E-15 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 Gene3D G3DSA:3.30.450.20 9 140 2.1E-22 T 12-10-2018 vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 SUPERFAMILY SSF58104 221 511 1.07E-56 T 12-10-2018 vfu_B00297 7ebf3b6eb7397dc0878eb84d2eb1f522 513 Gene3D G3DSA:1.10.287.950 220 513 1.8E-52 T 12-10-2018 vfu_B00655 9e9e292045edc750d0ba4c638027adad 211 SUPERFAMILY SSF48452 56 182 4.05E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00655 9e9e292045edc750d0ba4c638027adad 211 Gene3D G3DSA:1.25.40.10 33 208 4.9E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00655 9e9e292045edc750d0ba4c638027adad 211 Pfam PF14559 Tetratricopeptide repeat 137 190 1.2E-5 T 12-10-2018 vfu_A02308 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 SUPERFAMILY SSF56796 1 380 4.45E-90 T 12-10-2018 vfu_A02308 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 Gene3D G3DSA:1.20.1090.10 184 382 3.9E-44 T 12-10-2018 vfu_A02308 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 Gene3D G3DSA:3.40.50.1970 1 180 3.0E-47 T 12-10-2018 vfu_A02308 5230d5a6f174b0dc2cf02e6a6ffd82d9 418 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 6.5E-94 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_B01103 7df4300341c60c4be88c7bedfa3ad373 294 Gene3D G3DSA:1.10.287.70 1 77 2.2E-17 T 12-10-2018 vfu_B01103 7df4300341c60c4be88c7bedfa3ad373 294 Gene3D G3DSA:1.20.120.80 79 294 9.9E-61 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01103 7df4300341c60c4be88c7bedfa3ad373 294 Pfam PF00510 Cytochrome c oxidase subunit III 7 293 1.7E-48 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01103 7df4300341c60c4be88c7bedfa3ad373 294 SUPERFAMILY SSF81452 5 294 4.06E-76 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00989 e272733c2eb53f563798dbb6cee00883 405 Gene3D G3DSA:1.10.1660.30 36 102 1.6E-5 T 12-10-2018 vfu_B00989 e272733c2eb53f563798dbb6cee00883 405 SUPERFAMILY SSF52540 108 368 1.49E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00989 e272733c2eb53f563798dbb6cee00883 405 Pfam PF13614 AAA domain 110 295 4.2E-23 T 12-10-2018 IPR025669 AAA domain vfu_B00989 e272733c2eb53f563798dbb6cee00883 405 Gene3D G3DSA:3.40.50.300 107 398 9.8E-57 T 12-10-2018 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 398 7.2E-147 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 Pfam PF02441 Flavoprotein 7 179 1.8E-44 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 SUPERFAMILY SSF102645 184 403 2.75E-78 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 SUPERFAMILY SSF52507 1 182 6.8E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 Gene3D G3DSA:3.40.50.1950 1 183 9.0E-56 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 1.3E-75 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 vfu_A00158 fdc467414dae438892b7ffb1e60a38df 405 Gene3D G3DSA:3.40.50.10300 184 405 3.1E-79 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 vfu_A00408 35fbc008cfaacdb29fcec4f44e06d9ff 303 SUPERFAMILY SSF103481 45 146 6.28E-13 T 12-10-2018 vfu_A00408 35fbc008cfaacdb29fcec4f44e06d9ff 303 SUPERFAMILY SSF103481 191 293 1.7E-11 T 12-10-2018 vfu_A00408 35fbc008cfaacdb29fcec4f44e06d9ff 303 Pfam PF00892 EamA-like transporter family 11 143 3.6E-17 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A00408 35fbc008cfaacdb29fcec4f44e06d9ff 303 Pfam PF00892 EamA-like transporter family 157 288 4.6E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01345 13b33b7a0ca1cfed1c5ac034d50ea2fd 344 SUPERFAMILY SSF51726 4 338 3.79E-68 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_B01345 13b33b7a0ca1cfed1c5ac034d50ea2fd 344 Gene3D G3DSA:3.20.20.210 1 343 1.6E-133 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_B01345 13b33b7a0ca1cfed1c5ac034d50ea2fd 344 PIRSF PIRSF005632 1 343 6.1E-197 T 12-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit vfu_B01345 13b33b7a0ca1cfed1c5ac034d50ea2fd 344 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 5.9E-36 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 SUPERFAMILY SSF55120 9 248 1.27E-80 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 Gene3D G3DSA:3.30.2350.10 1 248 5.4E-93 T 12-10-2018 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 Gene3D G3DSA:2.30.130.10 249 312 1.3E-20 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.666 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 1.8E-55 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 4.0E-86 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 SUPERFAMILY SSF88697 250 309 3.68E-14 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 248 3.4E-24 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 vfu_A00942 8a2cebee29774b5fd40b942ae36e4bb4 315 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.2E-17 T 12-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02216 c191f334f822e85fe99c524f67faaae4 283 Gene3D G3DSA:1.10.150.650 99 170 2.5E-83 T 12-10-2018 vfu_A02216 c191f334f822e85fe99c524f67faaae4 283 Pfam PF02811 PHP domain 5 220 8.2E-11 T 12-10-2018 IPR004013 PHP domain GO:0003824 vfu_A02216 c191f334f822e85fe99c524f67faaae4 283 SUPERFAMILY SSF89550 1 276 2.22E-55 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 vfu_A02216 c191f334f822e85fe99c524f67faaae4 283 SMART SM00481 4 71 1.9E-17 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal vfu_A02216 c191f334f822e85fe99c524f67faaae4 283 Gene3D G3DSA:3.20.20.140 4 251 2.5E-83 T 12-10-2018 vfu_B00051 ae60b7ebf9d7c8c2873ad68b15ef2698 138 Pfam PF00583 Acetyltransferase (GNAT) family 59 115 5.4E-9 T 12-10-2018 IPR000182 GNAT domain vfu_B00051 ae60b7ebf9d7c8c2873ad68b15ef2698 138 SUPERFAMILY SSF55729 34 137 3.71E-22 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00051 ae60b7ebf9d7c8c2873ad68b15ef2698 138 Gene3D G3DSA:3.40.630.30 35 137 4.1E-23 T 12-10-2018 vfu_B00598 471a0afb3e5fd5f810c738a1e11c7029 219 Gene3D G3DSA:3.40.50.2300 1 118 4.5E-12 T 12-10-2018 vfu_B00598 471a0afb3e5fd5f810c738a1e11c7029 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 217 8.2E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00598 471a0afb3e5fd5f810c738a1e11c7029 219 SMART SM00862 146 217 6.3E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00598 471a0afb3e5fd5f810c738a1e11c7029 219 SUPERFAMILY SSF46894 132 217 4.54E-22 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00598 471a0afb3e5fd5f810c738a1e11c7029 219 Gene3D G3DSA:1.10.10.10 125 219 4.1E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00598 471a0afb3e5fd5f810c738a1e11c7029 219 SUPERFAMILY SSF52172 3 127 6.3E-11 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01217 201f75ecdd46e4ff9a950302d499d7af 149 Gene3D G3DSA:3.30.1490.190 85 141 5.3E-23 T 12-10-2018 vfu_A01217 201f75ecdd46e4ff9a950302d499d7af 149 SUPERFAMILY SSF46785 5 135 1.77E-43 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01217 201f75ecdd46e4ff9a950302d499d7af 149 Pfam PF01475 Ferric uptake regulator family 11 130 1.4E-46 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 vfu_A01217 201f75ecdd46e4ff9a950302d499d7af 149 Gene3D G3DSA:1.10.10.10 1 84 3.5E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01015 60d4ddde9626a11936d38f3664d394fb 212 Gene3D G3DSA:3.30.530.20 26 209 8.3E-58 T 12-10-2018 IPR023393 START-like domain superfamily vfu_B01015 60d4ddde9626a11936d38f3664d394fb 212 PIRSF PIRSF039033 2 212 1.1E-60 T 12-10-2018 IPR028347 START domain-containing protein vfu_B01015 60d4ddde9626a11936d38f3664d394fb 212 Pfam PF01852 START domain 46 199 2.6E-14 T 12-10-2018 IPR002913 START domain GO:0008289 vfu_B01015 60d4ddde9626a11936d38f3664d394fb 212 SUPERFAMILY SSF55961 25 199 2.04E-41 T 12-10-2018 vfu_A00397 110c510d2693f85180167c3dee392680 501 Gene3D G3DSA:3.40.50.300 5 242 9.5E-58 T 12-10-2018 vfu_A00397 110c510d2693f85180167c3dee392680 501 SUPERFAMILY SSF52540 271 489 1.03E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00397 110c510d2693f85180167c3dee392680 501 SMART SM00382 35 223 1.8E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00397 110c510d2693f85180167c3dee392680 501 SMART SM00382 286 480 0.12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00397 110c510d2693f85180167c3dee392680 501 Pfam PF00005 ABC transporter 280 431 1.3E-19 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00397 110c510d2693f85180167c3dee392680 501 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00397 110c510d2693f85180167c3dee392680 501 Pfam PF00005 ABC transporter 26 175 2.8E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00397 110c510d2693f85180167c3dee392680 501 SUPERFAMILY SSF52540 10 232 2.51E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00397 110c510d2693f85180167c3dee392680 501 Gene3D G3DSA:3.40.50.300 266 497 1.5E-44 T 12-10-2018 vfu_B01386 fec965d437707dd673d4b4c5d9cb294d 487 Pfam PF01266 FAD dependent oxidoreductase 19 383 1.1E-12 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_B01386 fec965d437707dd673d4b4c5d9cb294d 487 SUPERFAMILY SSF51905 9 317 9.48E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01386 fec965d437707dd673d4b4c5d9cb294d 487 Gene3D G3DSA:3.50.50.60 15 106 3.8E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01384 6916f74303c045889ad90c918c0d8021 330 Gene3D G3DSA:3.30.1330.60 124 301 6.1E-41 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01384 6916f74303c045889ad90c918c0d8021 330 Pfam PF00691 OmpA family 170 265 1.4E-11 T 12-10-2018 IPR006665 OmpA-like domain vfu_A01384 6916f74303c045889ad90c918c0d8021 330 SUPERFAMILY SSF103088 154 274 2.88E-18 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01384 6916f74303c045889ad90c918c0d8021 330 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 63 1.0E-15 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain vfu_B00616 61440d9c280f0b3ef760ba046a9eb471 314 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 110 205 1.9E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_B00616 61440d9c280f0b3ef760ba046a9eb471 314 SUPERFAMILY SSF161098 112 296 1.7E-47 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00616 61440d9c280f0b3ef760ba046a9eb471 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 131 310 5.3E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00616 61440d9c280f0b3ef760ba046a9eb471 314 Gene3D G3DSA:1.10.3720.10 109 313 4.3E-56 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 Pfam PF02378 Phosphotransferase system, EIIC 17 357 3.0E-85 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 SUPERFAMILY SSF55604 449 520 2.88E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 Pfam PF00367 phosphotransferase system, EIIB 449 481 1.6E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 Gene3D G3DSA:3.30.1360.60 442 522 5.4E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 6 520 1.7E-298 T 12-10-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00500+2.7.1.208 vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 416 506 1.2E-22 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 vfu_A03016 32d67baa589ee72ed3767bf0672ec11f 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 459 476 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 vfu_A02888 010960cc4aab8b0cb822fbe8900f7cd0 396 TIGRFAM TIGR00835 agcS: amino acid carrier protein 76 393 1.3E-127 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02888 010960cc4aab8b0cb822fbe8900f7cd0 396 PRINTS PR00175 Sodium/alanine symporter signature 366 384 1.8E-35 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02888 010960cc4aab8b0cb822fbe8900f7cd0 396 PRINTS PR00175 Sodium/alanine symporter signature 150 172 1.8E-35 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02888 010960cc4aab8b0cb822fbe8900f7cd0 396 PRINTS PR00175 Sodium/alanine symporter signature 241 259 1.8E-35 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02888 010960cc4aab8b0cb822fbe8900f7cd0 396 PRINTS PR00175 Sodium/alanine symporter signature 269 288 1.8E-35 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02888 010960cc4aab8b0cb822fbe8900f7cd0 396 Pfam PF01235 Sodium:alanine symporter family 111 384 4.6E-121 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A01054 002699b979fc65516e0b98c905512934 415 Gene3D G3DSA:3.40.50.1820 18 415 2.1E-114 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01054 002699b979fc65516e0b98c905512934 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 57.611 T 12-10-2018 IPR010520 UPF0255 family vfu_A01054 002699b979fc65516e0b98c905512934 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 413 2.5E-223 T 12-10-2018 IPR010520 UPF0255 family vfu_A01054 002699b979fc65516e0b98c905512934 415 SUPERFAMILY SSF53474 47 413 2.22E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01750 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 1.5E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_A01750 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 SUPERFAMILY SSF55166 52 181 6.02E-35 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 vfu_A01750 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 31 179 3.4E-70 T 12-10-2018 IPR010275 Protein of unknown function DUF882 vfu_A01750 5dbc8a05f0f5cedf20a1bbaa7b920b56 182 Gene3D G3DSA:3.30.1380.10 58 182 2.3E-12 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 vfu_B00400 6ffd990c582af2d95761d6fbaa664078 60 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 6 49 2.0E-7 T 12-10-2018 IPR024400 Protein of unknown function DUF2635 vfu_B00400 6ffd990c582af2d95761d6fbaa664078 60 Pfam PF10948 Protein of unknown function (DUF2635) 6 50 9.7E-21 T 12-10-2018 IPR024400 Protein of unknown function DUF2635 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 107 117 3.8E-6 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 358 366 3.8E-6 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 60 71 3.8E-6 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 163 174 3.8E-6 T 12-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 SUPERFAMILY SSF56935 33 366 1.5E-38 T 12-10-2018 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 Gene3D G3DSA:2.40.160.10 27 366 9.8E-36 T 12-10-2018 IPR023614 Porin domain superfamily vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 Pfam PF13609 Gram-negative porin 12 323 1.1E-31 T 12-10-2018 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00184 Neisseria sp. porin signature 62 87 2.2E-5 T 12-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00184 Neisseria sp. porin signature 238 258 2.2E-5 T 12-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 vfu_A02631 03583c56eb2bad3658fddd899e058f52 366 PRINTS PR00184 Neisseria sp. porin signature 162 179 2.2E-5 T 12-10-2018 IPR002299 Porin, Neisseria sp. type GO:0015288|GO:0016020|GO:0055085 vfu_B00727 e02fd5dfbd88794f051c01708ffaa8f6 335 Gene3D G3DSA:3.40.190.10 119 262 5.9E-89 T 12-10-2018 vfu_B00727 e02fd5dfbd88794f051c01708ffaa8f6 335 SUPERFAMILY SSF53850 31 326 2.41E-65 T 12-10-2018 vfu_B00727 e02fd5dfbd88794f051c01708ffaa8f6 335 Pfam PF16868 NMT1-like family 33 325 1.0E-108 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family vfu_B00727 e02fd5dfbd88794f051c01708ffaa8f6 335 Gene3D G3DSA:3.40.190.10 33 325 5.9E-89 T 12-10-2018 vfu_B00727 e02fd5dfbd88794f051c01708ffaa8f6 335 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 2 325 1.7E-101 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family vfu_A01866 4bd4f8d08737828641a473d8a0ddf0c0 303 Gene3D G3DSA:3.30.420.40 4 298 4.2E-100 T 12-10-2018 vfu_A01866 4bd4f8d08737828641a473d8a0ddf0c0 303 Pfam PF00480 ROK family 2 301 4.0E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A01866 4bd4f8d08737828641a473d8a0ddf0c0 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 64.342 T 12-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 vfu_A01866 4bd4f8d08737828641a473d8a0ddf0c0 303 SUPERFAMILY SSF53067 1 300 7.41E-58 T 12-10-2018 vfu_A01866 4bd4f8d08737828641a473d8a0ddf0c0 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A01866 4bd4f8d08737828641a473d8a0ddf0c0 303 Gene3D G3DSA:3.30.420.40 119 291 4.2E-100 T 12-10-2018 vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 PRINTS PR01021 OMPA domain signature 118 140 7.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 PRINTS PR01021 OMPA domain signature 148 163 7.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 PRINTS PR01021 OMPA domain signature 163 179 7.4E-10 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 Gene3D G3DSA:3.30.1330.60 80 222 4.0E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 Pfam PF00691 OmpA family 118 212 6.5E-21 T 12-10-2018 IPR006665 OmpA-like domain vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 Pfam PF13488 Glycine zipper 38 86 4.1E-11 T 12-10-2018 IPR039567 Glycine zipper domain vfu_A02163 257af863719ffad76d158a1d18bcd8a9 222 SUPERFAMILY SSF103088 106 221 4.71E-36 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 Gene3D G3DSA:1.10.8.50 120 258 6.8E-48 T 12-10-2018 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 SUPERFAMILY SSF57716 206 258 1.14E-17 T 12-10-2018 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 Gene3D G3DSA:3.20.190.10 1 117 2.1E-33 T 12-10-2018 IPR035937 MutM-like, N-terminal vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 103 6.5E-24 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 ProSitePatterns PS01242 Zinc finger FPG-type signature. 233 257 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 258 38.217 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 2 257 1.1E-88 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 SUPERFAMILY SSF81624 2 127 1.83E-33 T 12-10-2018 IPR035937 MutM-like, N-terminal vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 SMART SM01232 118 210 4.8E-47 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 118 207 1.6E-27 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 SMART SM00898 1 104 2.0E-36 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 Pfam PF06827 Zinc finger found in FPG and IleRS 230 259 8.5E-11 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 vfu_A00152 30c520312b8b901c3fa1c0d8925b38d5 267 SUPERFAMILY SSF46946 119 210 1.28E-30 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 SUPERFAMILY SSF51445 166 618 3.84E-100 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 Gene3D G3DSA:3.30.379.10 14 162 2.3E-21 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 SUPERFAMILY SSF55545 31 165 6.8E-29 T 12-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 30 162 8.5E-14 T 12-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 166 605 1.8E-110 T 12-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 309 1.2E-40 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 160 177 1.2E-40 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 241 258 1.2E-40 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 125 145 1.2E-40 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 189 210 1.2E-40 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 326 1.2E-40 T 12-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 Gene3D G3DSA:3.20.20.80 164 450 1.5E-88 T 12-10-2018 vfu_A02208 3f0561e7eea295c492d0db1806a49df4 816 Gene3D G3DSA:3.20.20.80 539 636 8.8E-15 T 12-10-2018 vfu_A00862 dcf1ece63e7473210ed49362b9a5ce9d 273 Pfam PF00149 Calcineurin-like phosphoesterase 14 205 6.1E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_A00862 dcf1ece63e7473210ed49362b9a5ce9d 273 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 204 259 7.0E-23 T 12-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 vfu_A00862 dcf1ece63e7473210ed49362b9a5ce9d 273 Gene3D G3DSA:3.60.21.10 2 272 6.2E-72 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_A00862 dcf1ece63e7473210ed49362b9a5ce9d 273 SUPERFAMILY SSF56300 11 258 8.51E-60 T 12-10-2018 vfu_A00862 dcf1ece63e7473210ed49362b9a5ce9d 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 259 42.68 T 12-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 Gene3D G3DSA:3.30.70.140 1 100 3.8E-37 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 9.0E-19 T 12-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 Gene3D G3DSA:2.30.30.20 101 153 1.7E-24 T 12-10-2018 vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.679 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 SUPERFAMILY SSF57825 101 151 9.81E-16 T 12-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 SUPERFAMILY SSF54893 2 100 4.32E-36 T 12-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 5.6E-62 T 12-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 1.0E-43 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal vfu_A00749 a85d178a0b5b3abadfa24e9f56bd6751 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 6.3E-31 T 12-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal vfu_B00291 03cd152ba7f3866a4f66ac867573c0fd 157 SUPERFAMILY SSF55729 1 143 2.62E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00291 03cd152ba7f3866a4f66ac867573c0fd 157 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 2.6E-12 T 12-10-2018 IPR000182 GNAT domain vfu_B00291 03cd152ba7f3866a4f66ac867573c0fd 157 Gene3D G3DSA:3.40.630.30 1 149 1.2E-32 T 12-10-2018 vfu_A01645 fcbf630a3096f3735a1a60bfcdb21f1b 266 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 247 9.3E-74 T 12-10-2018 IPR005226 UPF0014 family vfu_B00899 cf7589e8acf8132de56566cc95f74356 159 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 10 88 2.8E-10 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00899 cf7589e8acf8132de56566cc95f74356 159 Gene3D G3DSA:2.30.110.10 1 120 4.4E-22 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_B00899 cf7589e8acf8132de56566cc95f74356 159 SUPERFAMILY SSF50475 8 105 1.73E-13 T 12-10-2018 vfu_A00931 e011112816d2491c2be2022027f658cb 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.1E-37 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 vfu_A00931 e011112816d2491c2be2022027f658cb 98 Gene3D G3DSA:3.30.110.60 1 98 4.2E-36 T 12-10-2018 IPR035920 YhbY-like superfamily vfu_A00931 e011112816d2491c2be2022027f658cb 98 SUPERFAMILY SSF75471 1 94 7.46E-30 T 12-10-2018 IPR035920 YhbY-like superfamily vfu_A00931 e011112816d2491c2be2022027f658cb 98 SMART SM01103 3 86 1.1E-39 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 vfu_A00931 e011112816d2491c2be2022027f658cb 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.4E-20 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 vfu_A00931 e011112816d2491c2be2022027f658cb 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 4.0E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 vfu_B00615 6820f8ae35ad616807268ad18eca4d71 250 PIRSF PIRSF039085 7 250 2.0E-107 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 vfu_B00615 6820f8ae35ad616807268ad18eca4d71 250 SMART SM00382 36 223 2.8E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00615 6820f8ae35ad616807268ad18eca4d71 250 Pfam PF00005 ABC transporter 27 175 6.6E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00615 6820f8ae35ad616807268ad18eca4d71 250 Gene3D G3DSA:3.40.50.300 8 250 1.2E-76 T 12-10-2018 vfu_B00615 6820f8ae35ad616807268ad18eca4d71 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00615 6820f8ae35ad616807268ad18eca4d71 250 SUPERFAMILY SSF52540 10 245 5.96E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03069 1e1e28da7e312e7fc6a910ae1433e344 786 Gene3D G3DSA:2.60.450.10 49 99 7.6E-9 T 12-10-2018 vfu_A03069 1e1e28da7e312e7fc6a910ae1433e344 786 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 758 20.0 T 12-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 vfu_A03069 1e1e28da7e312e7fc6a910ae1433e344 786 Pfam PF03968 OstA-like protein 57 189 2.2E-19 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal vfu_A03069 1e1e28da7e312e7fc6a910ae1433e344 786 Pfam PF04453 Organic solvent tolerance protein 297 685 1.2E-109 T 12-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 vfu_A00763 1ad64d22ff368f75d9b8c831c7aa1fb5 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 354 2.7E-71 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 vfu_A00763 1ad64d22ff368f75d9b8c831c7aa1fb5 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 2.1E-133 T 12-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 vfu_B01407 4eff67c3a9156bd4f6ca406dddd27ff6 172 SUPERFAMILY SSF55785 14 110 4.19E-19 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01407 4eff67c3a9156bd4f6ca406dddd27ff6 172 Gene3D G3DSA:3.30.450.20 13 111 1.3E-14 T 12-10-2018 vfu_A00454 2bca3c018f4cba545b2aa89172f868d8 408 Gene3D G3DSA:1.20.1250.20 10 204 1.3E-12 T 12-10-2018 vfu_A00454 2bca3c018f4cba545b2aa89172f868d8 408 Pfam PF07690 Major Facilitator Superfamily 21 278 4.2E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A00454 2bca3c018f4cba545b2aa89172f868d8 408 Gene3D G3DSA:1.20.1250.20 210 407 4.1E-9 T 12-10-2018 vfu_A00454 2bca3c018f4cba545b2aa89172f868d8 408 SUPERFAMILY SSF103473 13 402 2.09E-31 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02473 222dc03880683b9a69082cce3286b812 371 TIGRFAM TIGR01388 rnd: ribonuclease D 5 370 3.1E-151 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 vfu_A02473 222dc03880683b9a69082cce3286b812 371 SUPERFAMILY SSF47819 295 370 3.4E-20 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 vfu_A02473 222dc03880683b9a69082cce3286b812 371 Pfam PF00570 HRDC domain 213 279 5.9E-9 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 vfu_A02473 222dc03880683b9a69082cce3286b812 371 SUPERFAMILY SSF47819 191 301 2.4E-23 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 vfu_A02473 222dc03880683b9a69082cce3286b812 371 SMART SM00474 3 171 1.8E-38 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 vfu_A02473 222dc03880683b9a69082cce3286b812 371 Gene3D G3DSA:1.10.150.80 294 371 3.0E-26 T 12-10-2018 vfu_A02473 222dc03880683b9a69082cce3286b812 371 Gene3D G3DSA:1.10.150.80 195 293 1.1E-17 T 12-10-2018 vfu_A02473 222dc03880683b9a69082cce3286b812 371 Gene3D G3DSA:3.30.420.10 1 194 6.4E-65 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A02473 222dc03880683b9a69082cce3286b812 371 SUPERFAMILY SSF53098 2 209 1.61E-67 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A02473 222dc03880683b9a69082cce3286b812 371 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 43.062 T 12-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 vfu_A02473 222dc03880683b9a69082cce3286b812 371 Pfam PF01612 3'-5' exonuclease 3 170 1.3E-38 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 PRINTS PR00335 TrkA potassium uptake protein signature 37 51 3.1E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 PRINTS PR00335 TrkA potassium uptake protein signature 54 68 3.1E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 PRINTS PR00335 TrkA potassium uptake protein signature 94 104 3.1E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 PRINTS PR00335 TrkA potassium uptake protein signature 83 93 3.1E-9 T 12-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 Pfam PF02254 TrkA-N domain 38 148 1.7E-24 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 SUPERFAMILY SSF51735 37 165 1.01E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00656 a5fd52a5c23a50b9223261a944de9588 235 Gene3D G3DSA:3.40.50.720 34 196 4.4E-36 T 12-10-2018 vfu_B01270 821452fcf1a16e4ba65914a050272d06 299 SUPERFAMILY SSF103481 187 284 2.48E-10 T 12-10-2018 vfu_B01270 821452fcf1a16e4ba65914a050272d06 299 Pfam PF00892 EamA-like transporter family 3 135 2.5E-19 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01270 821452fcf1a16e4ba65914a050272d06 299 Pfam PF00892 EamA-like transporter family 151 280 2.0E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01270 821452fcf1a16e4ba65914a050272d06 299 SUPERFAMILY SSF103481 36 137 1.83E-11 T 12-10-2018 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.4E-33 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 SMART SM00411 1 90 8.1E-44 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.2E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.2E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.2E-20 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 Gene3D G3DSA:4.10.520.10 1 90 2.5E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_A02427 68c66ab8bec7c4341741d1a1eac95186 90 SUPERFAMILY SSF47729 1 90 5.74E-32 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 vfu_B01347 7c97faf77a8c058d22dac322f45d27bd 211 Gene3D G3DSA:2.160.10.10 1 210 2.5E-76 T 12-10-2018 vfu_B01347 7c97faf77a8c058d22dac322f45d27bd 211 SUPERFAMILY SSF51161 16 205 5.54E-47 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_B01347 7c97faf77a8c058d22dac322f45d27bd 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 vfu_B01347 7c97faf77a8c058d22dac322f45d27bd 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 2.3E-11 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00790 cd1971c61d08b10b8984fd0abb949ac2 432 SUPERFAMILY SSF58104 124 430 5.23E-62 T 12-10-2018 vfu_A00790 cd1971c61d08b10b8984fd0abb949ac2 432 Gene3D G3DSA:1.10.287.950 101 432 6.5E-60 T 12-10-2018 vfu_A00790 cd1971c61d08b10b8984fd0abb949ac2 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 248 398 2.3E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00790 cd1971c61d08b10b8984fd0abb949ac2 432 SMART SM00283 170 431 7.1E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 SUPERFAMILY SSF53067 126 217 1.68E-17 T 12-10-2018 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 4 381 1.2E-97 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 Gene3D G3DSA:3.30.420.380 1 217 3.5E-75 T 12-10-2018 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 SUPERFAMILY SSF53067 1 123 2.46E-34 T 12-10-2018 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 Gene3D G3DSA:3.30.1360.100 297 383 8.4E-28 T 12-10-2018 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 Pfam PF12693 GspL periplasmic domain 224 382 2.1E-51 T 12-10-2018 IPR025691 GspL periplasmic domain vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 Gene3D G3DSA:3.30.420.370 122 195 3.5E-75 T 12-10-2018 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 PIRSF PIRSF015761 12 382 3.2E-37 T 12-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 vfu_A00519 f5eecb10d2e312c0272be61b4e7ed446 383 Pfam PF05134 Type II secretion system (T2SS), protein L 1 220 3.8E-60 T 12-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain vfu_B00149 8ac140ea2766e15aa88a836c93702893 289 Pfam PF13394 4Fe-4S single cluster domain 14 121 3.5E-6 T 12-10-2018 vfu_B00149 8ac140ea2766e15aa88a836c93702893 289 SUPERFAMILY SSF102114 7 247 3.53E-28 T 12-10-2018 vfu_B00149 8ac140ea2766e15aa88a836c93702893 289 Gene3D G3DSA:3.20.20.70 3 273 3.2E-30 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00149 8ac140ea2766e15aa88a836c93702893 289 Pfam PF04055 Radical SAM superfamily 13 141 8.7E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.4E-36 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal vfu_A02928 aa16221d8129a3797856523c2fda73df 405 SUPERFAMILY SSF55307 204 320 9.39E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 SMART SM00864 13 205 2.0E-113 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 331 1.5E-136 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 SUPERFAMILY SSF52490 13 208 5.63E-69 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 2.4E-39 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 SMART SM00865 207 325 1.1E-55 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 Gene3D G3DSA:3.40.50.1440 5 220 8.3E-80 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 189 211 4.6E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 98 118 4.6E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 212 233 4.6E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 PRINTS PR00423 Cell division protein FtsZ signature 126 147 4.6E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 392 38.237 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 vfu_A02928 aa16221d8129a3797856523c2fda73df 405 Gene3D G3DSA:3.30.1330.20 221 327 1.2E-34 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 vfu_A00341 1c1dccbff1b0a32712367dc0c2ed8307 257 Gene3D G3DSA:3.40.50.300 1 255 2.4E-77 T 12-10-2018 vfu_A00341 1c1dccbff1b0a32712367dc0c2ed8307 257 Pfam PF13614 AAA domain 2 178 3.4E-63 T 12-10-2018 IPR025669 AAA domain vfu_A00341 1c1dccbff1b0a32712367dc0c2ed8307 257 PIRSF PIRSF009320 2 88 1.2E-13 T 12-10-2018 vfu_A00341 1c1dccbff1b0a32712367dc0c2ed8307 257 PIRSF PIRSF009320 87 251 6.9E-9 T 12-10-2018 vfu_A00341 1c1dccbff1b0a32712367dc0c2ed8307 257 SUPERFAMILY SSF52540 2 253 3.63E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00797 61bd10364c47c235c18201786a553d14 96 Gene3D G3DSA:2.60.200.60 55 96 1.8E-11 T 12-10-2018 vfu_B00797 61bd10364c47c235c18201786a553d14 96 Pfam PF05488 PAAR motif 18 87 6.0E-22 T 12-10-2018 IPR008727 PAAR motif vfu_B00797 61bd10364c47c235c18201786a553d14 96 Gene3D G3DSA:2.60.200.60 1 54 2.2E-8 T 12-10-2018 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 SUPERFAMILY SSF52540 2 257 2.04E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 Pfam PF00005 ABC transporter 17 178 2.0E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 SUPERFAMILY SSF52540 277 494 1.24E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 Gene3D G3DSA:3.40.50.300 7 273 3.7E-59 T 12-10-2018 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 Gene3D G3DSA:3.40.50.300 276 540 1.0E-54 T 12-10-2018 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 SMART SM00382 26 223 4.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 SMART SM00382 337 503 9.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 Pfam PF00005 ABC transporter 328 459 7.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00653 658a9d73425f9a3e6510fe5292e62515 640 Pfam PF12848 ABC transporter 217 295 1.0E-27 T 12-10-2018 IPR032781 ABC-transporter extension domain vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 Gene3D G3DSA:1.25.40.10 177 323 3.4E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 85 118 130.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 291 324 0.0027 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 251 284 57.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 SMART SM00028 331 364 140.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 SUPERFAMILY SSF48452 175 361 2.81E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02681 8759a55bcb491fd407035b7899b8fe0a 756 Gene3D G3DSA:1.25.40.10 324 498 1.3E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 Gene3D G3DSA:3.40.640.10 3 248 4.3E-82 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 1.9E-133 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 PIRSF PIRSF001434 1 385 1.2E-128 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 SUPERFAMILY SSF53383 11 383 7.74E-115 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 4.1E-202 T 12-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 Gene3D G3DSA:3.90.1150.10 249 387 1.1E-48 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A00582 1fe498482fdb2f0002219b01def4a4ab 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 vfu_B00103 6e92dd7d62106ef702eb3dfa25173536 280 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 12 258 2.8E-93 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 vfu_B00103 6e92dd7d62106ef702eb3dfa25173536 280 Gene3D G3DSA:3.40.50.11240 72 257 8.3E-64 T 12-10-2018 vfu_B00103 6e92dd7d62106ef702eb3dfa25173536 280 Gene3D G3DSA:1.10.30.40 10 56 7.0E-12 T 12-10-2018 vfu_B00103 6e92dd7d62106ef702eb3dfa25173536 280 PIRSF PIRSF018982 2 269 3.2E-89 T 12-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 vfu_A01022 f02d3280556dee91b931dbd650e6b369 240 Gene3D G3DSA:3.40.109.10 1 240 4.9E-73 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A01022 f02d3280556dee91b931dbd650e6b369 240 Pfam PF00881 Nitroreductase family 8 159 3.0E-22 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 vfu_A01022 f02d3280556dee91b931dbd650e6b369 240 PIRSF PIRSF005426 1 240 1.1E-80 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 vfu_A01022 f02d3280556dee91b931dbd650e6b369 240 SUPERFAMILY SSF55469 1 238 4.97E-72 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A01519 4c65a0583129fcf7cd4c42be427ac370 148 Pfam PF13279 Thioesterase-like superfamily 18 123 7.3E-14 T 12-10-2018 vfu_A01519 4c65a0583129fcf7cd4c42be427ac370 148 Gene3D G3DSA:3.10.129.10 9 142 1.4E-27 T 12-10-2018 vfu_A01519 4c65a0583129fcf7cd4c42be427ac370 148 SUPERFAMILY SSF54637 9 143 5.29E-31 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A03139 7926859a3cda158b861488daceef1654 319 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 314 51.225 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 vfu_A03139 7926859a3cda158b861488daceef1654 319 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 79 97 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A03139 7926859a3cda158b861488daceef1654 319 SUPERFAMILY SSF51395 1 311 5.7E-75 T 12-10-2018 vfu_A03139 7926859a3cda158b861488daceef1654 319 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 311 6.9E-158 T 12-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 vfu_A03139 7926859a3cda158b861488daceef1654 319 Gene3D G3DSA:1.20.120.1460 239 314 1.7E-23 T 12-10-2018 vfu_A03139 7926859a3cda158b861488daceef1654 319 Gene3D G3DSA:3.20.20.70 1 237 2.0E-72 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A03139 7926859a3cda158b861488daceef1654 319 PIRSF PIRSF006621 1 317 1.9E-74 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_A03139 7926859a3cda158b861488daceef1654 319 Pfam PF01207 Dihydrouridine synthase (Dus) 1 309 5.4E-95 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 vfu_B00850 6d94793d1258f57b729d9ab26dc61741 327 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 180 189 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 vfu_B00850 6d94793d1258f57b729d9ab26dc61741 327 SUPERFAMILY SSF53383 2 322 9.55E-65 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00850 6d94793d1258f57b729d9ab26dc61741 327 Gene3D G3DSA:3.40.640.10 23 227 4.6E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00850 6d94793d1258f57b729d9ab26dc61741 327 Gene3D G3DSA:3.90.1150.10 1 315 4.6E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00850 6d94793d1258f57b729d9ab26dc61741 327 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 1 322 1.8E-88 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 vfu_B00850 6d94793d1258f57b729d9ab26dc61741 327 Pfam PF00155 Aminotransferase class I and II 18 317 5.8E-48 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 SMART SM00382 12 295 9.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 16 66 7.4E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 298 367 6.0E-5 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 SUPERFAMILY SSF52540 4 404 2.78E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 Gene3D G3DSA:1.10.8.60 298 403 1.1E-39 T 12-10-2018 vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 SMART SM01086 298 397 3.6E-19 T 12-10-2018 IPR019489 Clp ATPase, C-terminal vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 1 406 2.5E-200 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 vfu_A00591 f0ead3593f79672e92c7b886d8b39842 406 Pfam PF07724 AAA domain (Cdc48 subfamily) 150 292 1.5E-42 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 vfu_A01011 b4097137ccd520114f6eed34c50175ce 158 SUPERFAMILY SSF53927 4 153 3.58E-35 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A01011 b4097137ccd520114f6eed34c50175ce 158 Gene3D G3DSA:3.40.140.10 4 156 1.7E-33 T 12-10-2018 vfu_A01011 b4097137ccd520114f6eed34c50175ce 158 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 105 1.0E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain vfu_A01011 b4097137ccd520114f6eed34c50175ce 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 SUPERFAMILY SSF52343 455 610 6.02E-53 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 397 404 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 559 567 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 536 552 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 467 486 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 281 291 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 505 516 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 492 501 1.9E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Pfam PF00667 FAD binding domain 243 435 6.9E-30 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 SUPERFAMILY SSF63380 239 456 5.22E-63 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 610 7.6E-259 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 7 610 49.745 T 12-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:1.20.990.10 291 395 2.3E-72 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:3.40.50.360 66 228 2.5E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 156 166 1.3E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 76 89 1.3E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 180 199 1.3E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PRINTS PR00369 Flavodoxin signature 124 135 1.3E-12 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 PIRSF PIRSF000207 7 610 8.5E-273 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Pfam PF00258 Flavodoxin 77 200 1.5E-30 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:2.40.30.10 244 450 2.3E-72 T 12-10-2018 vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 SUPERFAMILY SSF52218 74 219 1.82E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Gene3D G3DSA:3.40.50.80 456 610 3.3E-60 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A03135 96274856fe3c910e7df30db5a4f8fcb7 610 Pfam PF00175 Oxidoreductase NAD-binding domain 468 574 2.1E-19 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 Pfam PF04452 RNA methyltransferase 20 236 5.0E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 Gene3D G3DSA:2.40.240.20 1 71 4.7E-20 T 12-10-2018 vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 SUPERFAMILY SSF88697 2 71 1.14E-15 T 12-10-2018 IPR015947 PUA-like superfamily vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 SUPERFAMILY SSF75217 75 242 1.0E-51 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 PIRSF PIRSF015601 3 242 4.1E-54 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 7.4E-84 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 vfu_A03045 f0c5dc4dcbb9d233ae5b055a59b41fe9 243 Gene3D G3DSA:3.40.1280.10 74 243 6.6E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_A00748 3f1396caf3ce554478ea358f50abb1d3 129 SUPERFAMILY SSF55298 2 128 1.57E-44 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_A00748 3f1396caf3ce554478ea358f50abb1d3 129 Gene3D G3DSA:3.30.1330.40 2 129 3.2E-48 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_A00748 3f1396caf3ce554478ea358f50abb1d3 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 vfu_A00748 3f1396caf3ce554478ea358f50abb1d3 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 2.0E-43 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 vfu_A00748 3f1396caf3ce554478ea358f50abb1d3 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 2.3E-52 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 vfu_B01184 803a953b07edeb5536b68543a41f83a5 257 Pfam PF09850 Type VI secretion system protein DotU 39 240 6.8E-63 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU vfu_B01184 803a953b07edeb5536b68543a41f83a5 257 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 37 246 2.1E-70 T 12-10-2018 IPR017732 Type IV / VI secretion system, DotU vfu_B01184 803a953b07edeb5536b68543a41f83a5 257 Gene3D G3DSA:1.25.40.590 34 193 4.3E-60 T 12-10-2018 IPR038522 Type IV / VI secretion system, DotU superfamily vfu_B01286 c9a398146e2e489ac4a4ab317b1e47b6 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 194 6.8E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_A01145 b2ef7b8b64645cf80d2b25700eafc6c4 270 Pfam PF13371 Tetratricopeptide repeat 188 260 6.4E-25 T 12-10-2018 vfu_A01145 b2ef7b8b64645cf80d2b25700eafc6c4 270 Pfam PF13369 Transglutaminase-like superfamily 35 185 5.8E-43 T 12-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 vfu_A01145 b2ef7b8b64645cf80d2b25700eafc6c4 270 Gene3D G3DSA:1.25.40.10 169 266 1.9E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01145 b2ef7b8b64645cf80d2b25700eafc6c4 270 SUPERFAMILY SSF48452 191 257 1.35E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02418 6d031b1032ab26929c4f9dc896398c9f 260 Gene3D G3DSA:1.20.1260.10 7 76 1.2E-16 T 12-10-2018 IPR012347 Ferritin-like vfu_A02418 6d031b1032ab26929c4f9dc896398c9f 260 Gene3D G3DSA:1.20.1260.10 97 260 7.4E-55 T 12-10-2018 IPR012347 Ferritin-like vfu_A02418 6d031b1032ab26929c4f9dc896398c9f 260 PIRSF PIRSF020736 2 257 4.6E-92 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 vfu_A02418 6d031b1032ab26929c4f9dc896398c9f 260 SUPERFAMILY SSF47240 11 255 9.34E-73 T 12-10-2018 IPR009078 Ferritin-like superfamily vfu_A02418 6d031b1032ab26929c4f9dc896398c9f 260 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 252 9.8E-119 T 12-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 vfu_B00122 4bc8febccbcc8fec2858ed295b32afc4 374 Gene3D G3DSA:3.40.630.10 113 374 7.3E-72 T 12-10-2018 vfu_B00122 4bc8febccbcc8fec2858ed295b32afc4 374 SMART SM00631 112 354 1.5E-4 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 vfu_B00122 4bc8febccbcc8fec2858ed295b32afc4 374 SUPERFAMILY SSF53187 106 372 3.64E-64 T 12-10-2018 vfu_B00122 4bc8febccbcc8fec2858ed295b32afc4 374 Pfam PF00246 Zinc carboxypeptidase 125 341 3.2E-24 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 vfu_B00122 4bc8febccbcc8fec2858ed295b32afc4 374 Gene3D G3DSA:2.60.40.3120 1 112 2.3E-42 T 12-10-2018 vfu_B00596 b78d2ac23de8c183d6e753ef06cfca2d 123 Pfam PF13508 Acetyltransferase (GNAT) domain 30 102 1.3E-12 T 12-10-2018 IPR000182 GNAT domain vfu_B00596 b78d2ac23de8c183d6e753ef06cfca2d 123 Gene3D G3DSA:3.40.630.30 2 108 3.6E-18 T 12-10-2018 vfu_B00596 b78d2ac23de8c183d6e753ef06cfca2d 123 SUPERFAMILY SSF55729 5 108 3.93E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00427 0239afdb068d634f4da1aebe72aa1a90 184 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 177 15.703 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 vfu_A00427 0239afdb068d634f4da1aebe72aa1a90 184 Pfam PF04220 Der GTPase activator (YihI) 19 174 1.6E-44 T 12-10-2018 IPR007336 Der GTPase activator GO:0005096 vfu_B00867 12fcbce232631436e393589f6c70e80f 353 Gene3D G3DSA:2.30.40.10 291 337 4.2E-151 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_B00867 12fcbce232631436e393589f6c70e80f 353 Pfam PF07969 Amidohydrolase family 24 331 4.8E-45 T 12-10-2018 IPR013108 Amidohydrolase 3 vfu_B00867 12fcbce232631436e393589f6c70e80f 353 SUPERFAMILY SSF51556 5 302 2.99E-94 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_B00867 12fcbce232631436e393589f6c70e80f 353 Gene3D G3DSA:3.20.20.140 7 290 4.2E-151 T 12-10-2018 vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 SMART SM00344 3 111 2.1E-21 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 Pfam PF01037 Lrp/AsnC ligand binding domain 70 141 3.1E-14 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.8E-6 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.8E-6 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 6.9E-13 T 12-10-2018 vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 SUPERFAMILY SSF46785 2 61 1.42E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 SUPERFAMILY SSF54909 66 144 4.69E-13 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 Gene3D G3DSA:3.30.70.920 56 150 1.1E-16 T 12-10-2018 vfu_B00731 f440763c14dcff2e58fbccfbba36eca3 150 Gene3D G3DSA:1.10.10.10 4 55 1.4E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00270 2a037381ea61e75fbd42c23916deb412 371 Gene3D G3DSA:3.40.50.450 1 291 1.2E-96 T 12-10-2018 vfu_A00270 2a037381ea61e75fbd42c23916deb412 371 Pfam PF02481 DNA recombination-mediator protein A 75 278 9.6E-79 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 vfu_A00270 2a037381ea61e75fbd42c23916deb412 371 Gene3D G3DSA:1.10.10.10 295 366 1.5E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00270 2a037381ea61e75fbd42c23916deb412 371 SUPERFAMILY SSF102405 81 286 1.3E-41 T 12-10-2018 vfu_A00270 2a037381ea61e75fbd42c23916deb412 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 286 7.5E-74 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 vfu_A02930 f288e36f647583320c8ea8741acd2620 256 Pfam PF08478 POTRA domain, FtsQ-type 49 118 2.1E-17 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type vfu_A02930 f288e36f647583320c8ea8741acd2620 256 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 18 242 22.625 T 12-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 vfu_A02930 f288e36f647583320c8ea8741acd2620 256 Gene3D G3DSA:3.10.20.310 47 118 1.3E-24 T 12-10-2018 vfu_A02930 f288e36f647583320c8ea8741acd2620 256 Pfam PF03799 Cell division protein FtsQ 122 234 3.6E-24 T 12-10-2018 IPR005548 Cell division protein FtsQ/DivIB vfu_A02930 f288e36f647583320c8ea8741acd2620 256 Gene3D G3DSA:3.40.50.11690 121 247 3.0E-34 T 12-10-2018 vfu_A00410 5948feb11ab3aa15a28fdb26c2781575 153 Gene3D G3DSA:3.40.50.150 40 152 5.1E-34 T 12-10-2018 vfu_A00410 5948feb11ab3aa15a28fdb26c2781575 153 SUPERFAMILY SSF53335 9 148 6.69E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00410 5948feb11ab3aa15a28fdb26c2781575 153 Pfam PF01209 ubiE/COQ5 methyltransferase family 30 150 1.6E-46 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 vfu_A00410 5948feb11ab3aa15a28fdb26c2781575 153 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 vfu_A03015 2b973925581a36983f807352010582d1 399 Gene3D G3DSA:3.40.640.10 78 299 2.0E-111 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A03015 2b973925581a36983f807352010582d1 399 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 14 396 2.0E-107 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 vfu_A03015 2b973925581a36983f807352010582d1 399 SUPERFAMILY SSF53383 12 395 1.14E-79 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A03015 2b973925581a36983f807352010582d1 399 Pfam PF00155 Aminotransferase class I and II 42 391 5.2E-41 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A03015 2b973925581a36983f807352010582d1 399 Gene3D G3DSA:3.90.1150.10 22 389 2.0E-111 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00576 1c50f8f114d4dd03880a97411610a119 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 6.7E-60 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 vfu_B00576 1c50f8f114d4dd03880a97411610a119 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 11 236 1.3E-52 T 12-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 vfu_B00576 1c50f8f114d4dd03880a97411610a119 238 SUPERFAMILY SSF100950 3 237 9.21E-61 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B00576 1c50f8f114d4dd03880a97411610a119 238 Gene3D G3DSA:3.40.50.1360 1 238 9.7E-89 T 12-10-2018 vfu_A02789 fbe3092908821868b2f6f2eb8a13a0d3 243 Gene3D G3DSA:1.10.8.590 173 243 1.8E-28 T 12-10-2018 vfu_A02789 fbe3092908821868b2f6f2eb8a13a0d3 243 PIRSF PIRSF004808 1 243 1.4E-74 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 vfu_A02789 fbe3092908821868b2f6f2eb8a13a0d3 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 5.6E-86 T 12-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 vfu_A02789 fbe3092908821868b2f6f2eb8a13a0d3 243 SUPERFAMILY SSF75217 4 173 3.66E-39 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_A02789 fbe3092908821868b2f6f2eb8a13a0d3 243 Gene3D G3DSA:3.40.1280.10 1 164 5.6E-64 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_A02789 fbe3092908821868b2f6f2eb8a13a0d3 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 4.0E-35 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 vfu_A01107 c4b817bcdde5d525207c04ca895e0205 165 Pfam PF04214 Protein of unknown function, DUF 66 135 1.7E-32 T 12-10-2018 IPR007332 Protein of unknown function DUF411 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 Pfam PF00459 Inositol monophosphatase family 2 259 4.2E-69 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 Gene3D G3DSA:3.40.190.80 144 266 2.2E-36 T 12-10-2018 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.6E-33 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.6E-33 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.6E-33 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.6E-33 T 12-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 3.3E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 3.3E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.3E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 3.3E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 3.3E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 3.3E-57 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 SUPERFAMILY SSF56655 1 259 1.7E-83 T 12-10-2018 vfu_A02790 9801fdfd0d0e7091825a75a0d609c9ba 267 Gene3D G3DSA:3.30.540.10 1 140 9.2E-51 T 12-10-2018 vfu_B00751 d302b3291b918b9fd027fcadc3888601 174 Gene3D G3DSA:1.10.357.10 1 169 4.9E-45 T 12-10-2018 vfu_B00751 d302b3291b918b9fd027fcadc3888601 174 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 2.9E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00751 d302b3291b918b9fd027fcadc3888601 174 Pfam PF14278 Transcriptional regulator C-terminal region 79 152 1.6E-16 T 12-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type vfu_B00751 d302b3291b918b9fd027fcadc3888601 174 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00751 d302b3291b918b9fd027fcadc3888601 174 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.4E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00751 d302b3291b918b9fd027fcadc3888601 174 SUPERFAMILY SSF46689 2 65 1.95E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01857 26e8c02cd3ce5307afef4d4242f7d467 429 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 394 2.1E-109 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A01857 26e8c02cd3ce5307afef4d4242f7d467 429 PIRSF PIRSF006603 1 426 5.7E-54 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A01857 26e8c02cd3ce5307afef4d4242f7d467 429 Pfam PF01554 MatE 1 149 1.9E-31 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A01857 26e8c02cd3ce5307afef4d4242f7d467 429 Pfam PF01554 MatE 216 377 5.8E-35 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A02676 1a583ea32fbfc05caeb1bc3b67e936be 225 SUPERFAMILY SSF161098 15 210 3.53E-47 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02676 1a583ea32fbfc05caeb1bc3b67e936be 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.9E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02676 1a583ea32fbfc05caeb1bc3b67e936be 225 Gene3D G3DSA:1.10.3720.10 12 225 2.0E-50 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00492 9bcf5ce11732517f2c1f171353889725 336 Gene3D G3DSA:3.20.20.140 1 336 1.6E-95 T 12-10-2018 vfu_A00492 9bcf5ce11732517f2c1f171353889725 336 Hamap MF_00540 Adenosine deaminase [add]. 3 333 53.657 T 12-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 vfu_A00492 9bcf5ce11732517f2c1f171353889725 336 SUPERFAMILY SSF51556 5 327 9.36E-75 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A00492 9bcf5ce11732517f2c1f171353889725 336 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 9 332 2.5E-121 T 12-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 vfu_A00492 9bcf5ce11732517f2c1f171353889725 336 Pfam PF00962 Adenosine/AMP deaminase 8 328 9.9E-90 T 12-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 SUPERFAMILY SSF56784 6 274 2.0E-67 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 1.1E-62 T 12-10-2018 vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 12-10-2018 vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 12-10-2018 vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 Gene3D G3DSA:3.40.50.1000 13 266 1.6E-73 T 12-10-2018 IPR023214 HAD superfamily vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 Gene3D G3DSA:3.30.1240.10 90 197 1.6E-73 T 12-10-2018 vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 8.7E-33 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 vfu_A00447 f80efa32b5efb7891d89bb64a178714e 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 1.3E-59 T 12-10-2018 IPR000150 Cof family GO:0016787 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 PIRSF PIRSF000497 1 381 1.5E-174 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.5E-197 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 SUPERFAMILY SSF55973 3 109 2.94E-47 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 SUPERFAMILY SSF55973 233 382 1.1E-69 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.1E-46 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.968 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Gene3D G3DSA:3.30.300.10 5 233 3.3E-179 T 12-10-2018 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Gene3D G3DSA:3.30.300.10 103 371 3.3E-179 T 12-10-2018 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Gene3D G3DSA:3.30.300.10 11 270 3.3E-179 T 12-10-2018 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 SUPERFAMILY SSF55973 111 232 1.18E-52 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 6.0E-43 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A03041 2d4f0bae80cb0675e4043bc928007ede 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.2E-68 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 vfu_A01526 497f09c99373ef5cd47339207df75f4f 86 Pfam PF00550 Phosphopantetheine attachment site 7 80 5.9E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain vfu_A01526 497f09c99373ef5cd47339207df75f4f 86 Gene3D G3DSA:1.10.1200.10 3 86 1.1E-21 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A01526 497f09c99373ef5cd47339207df75f4f 86 SUPERFAMILY SSF47336 5 84 5.5E-14 T 12-10-2018 IPR036736 ACP-like superfamily vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 SUPERFAMILY SSF63380 7 97 5.2E-18 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 Gene3D G3DSA:2.40.30.10 2 102 4.6E-22 T 12-10-2018 vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 Pfam PF00175 Oxidoreductase NAD-binding domain 118 227 3.3E-16 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 Pfam PF00970 Oxidoreductase FAD-binding domain 22 94 7.2E-7 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 SUPERFAMILY SSF52343 112 239 1.02E-30 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 Gene3D G3DSA:3.40.50.80 109 252 4.4E-34 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 117 136 4.9E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 54 61 4.9E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 213 221 4.9E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A02451 70d49382f68958aa01184c7e5e82cdaf 252 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 152 163 4.9E-5 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 vfu_A02174 927108fad97cd8eaebb7d5c4941d223e 142 SUPERFAMILY SSF51182 7 141 8.19E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_A02174 927108fad97cd8eaebb7d5c4941d223e 142 Gene3D G3DSA:2.60.120.10 37 136 2.7E-17 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A02174 927108fad97cd8eaebb7d5c4941d223e 142 Pfam PF07883 Cupin domain 68 135 6.1E-16 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B00845 0fe3ce23dd2ba43028e8e0aba25e9401 269 SUPERFAMILY SSF53213 7 265 6.41E-86 T 12-10-2018 vfu_B00845 0fe3ce23dd2ba43028e8e0aba25e9401 269 Gene3D G3DSA:3.40.830.10 1 265 1.7E-83 T 12-10-2018 vfu_B00845 0fe3ce23dd2ba43028e8e0aba25e9401 269 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 10 264 1.2E-41 T 12-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 vfu_B00845 0fe3ce23dd2ba43028e8e0aba25e9401 269 PIRSF PIRSF006157 4 266 5.9E-81 T 12-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 vfu_A01661 4b1fd9cc3453f009e92525f53aab4ec0 221 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 220 7.6E-95 T 12-10-2018 IPR014319 Phage shock protein, PspA vfu_A01661 4b1fd9cc3453f009e92525f53aab4ec0 221 Pfam PF04012 PspA/IM30 family 2 218 6.3E-61 T 12-10-2018 IPR007157 PspA/IM30 vfu_B00497 45d7d1b0250aad55dd5a3697e8075ad6 258 Gene3D G3DSA:3.60.20.10 1 257 2.6E-86 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_B00497 45d7d1b0250aad55dd5a3697e8075ad6 258 Pfam PF13230 Glutamine amidotransferases class-II 26 196 8.4E-20 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 vfu_B00497 45d7d1b0250aad55dd5a3697e8075ad6 258 SUPERFAMILY SSF56235 2 249 1.8E-34 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_B01051 e2253d8c7ac64e44385a4d9d9d87afa1 249 SUPERFAMILY SSF141371 24 137 5.89E-34 T 12-10-2018 vfu_B01051 e2253d8c7ac64e44385a4d9d9d87afa1 249 Pfam PF07238 PilZ domain 134 236 2.7E-13 T 12-10-2018 IPR009875 PilZ domain GO:0035438 vfu_B01051 e2253d8c7ac64e44385a4d9d9d87afa1 249 Pfam PF12945 Flagellar protein YcgR 38 127 2.9E-16 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal vfu_B01051 e2253d8c7ac64e44385a4d9d9d87afa1 249 Gene3D G3DSA:2.40.10.220 137 249 1.3E-40 T 12-10-2018 vfu_B01051 e2253d8c7ac64e44385a4d9d9d87afa1 249 SUPERFAMILY SSF141371 138 246 1.12E-28 T 12-10-2018 vfu_B01051 e2253d8c7ac64e44385a4d9d9d87afa1 249 Gene3D G3DSA:2.30.110.10 23 136 2.8E-48 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_A02371 9318235353e3da77312fc2b153f97074 261 Gene3D G3DSA:3.20.70.20 1 247 1.2E-99 T 12-10-2018 vfu_A02371 9318235353e3da77312fc2b153f97074 261 SUPERFAMILY SSF51998 4 233 2.43E-62 T 12-10-2018 vfu_A02371 9318235353e3da77312fc2b153f97074 261 Pfam PF02901 Pyruvate formate lyase-like 20 208 1.8E-42 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 SUPERFAMILY SSF51569 1 315 3.04E-115 T 12-10-2018 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 1.6E-102 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 Hamap MF_00492 Transaldolase [tal]. 2 316 51.497 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 1.3E-155 T 12-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 Gene3D G3DSA:3.20.20.70 2 316 1.7E-139 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00096 6e93915725c23bfa31edd581087d5b4f 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 SMART SM00851 25 118 6.0E-26 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 SUPERFAMILY SSF52335 2 150 1.96E-57 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 PIRSF PIRSF006614 8 151 1.0E-64 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 Gene3D G3DSA:3.40.50.1380 1 151 8.8E-66 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 33.106 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 1.7E-63 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 vfu_B00336 624fba72a5ba0642f5f7c8871d7c4abd 151 Pfam PF02142 MGS-like domain 26 118 7.0E-20 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain vfu_A02209 4bd9b4f73a738274a6f9df07fcec1967 212 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 209 7.0E-83 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A02209 4bd9b4f73a738274a6f9df07fcec1967 212 SUPERFAMILY SSF51569 3 210 4.76E-69 T 12-10-2018 vfu_A02209 4bd9b4f73a738274a6f9df07fcec1967 212 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A02209 4bd9b4f73a738274a6f9df07fcec1967 212 Gene3D G3DSA:3.20.20.70 1 212 4.3E-74 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02209 4bd9b4f73a738274a6f9df07fcec1967 212 Pfam PF01081 KDPG and KHG aldolase 11 202 3.0E-75 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A02209 4bd9b4f73a738274a6f9df07fcec1967 212 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 12-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 SUPERFAMILY SSF53335 153 337 1.6E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 Gene3D G3DSA:3.40.50.150 158 340 2.5E-42 T 12-10-2018 vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 Gene3D G3DSA:3.40.50.150 1 157 1.3E-48 T 12-10-2018 vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 45.951 T 12-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 9.8E-56 T 12-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 Pfam PF05175 Methyltransferase small domain 172 336 2.3E-59 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 vfu_A00917 4b3b3e6fdb9a919d5a59767f9e10a280 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_B00036 ed56505dd16107e8217d66c3088c0640 223 SUPERFAMILY SSF54637 74 216 6.15E-30 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_B00036 ed56505dd16107e8217d66c3088c0640 223 Pfam PF01575 MaoC like domain 81 198 1.1E-20 T 12-10-2018 IPR002539 MaoC-like dehydratase domain vfu_B00036 ed56505dd16107e8217d66c3088c0640 223 Gene3D G3DSA:3.10.129.10 73 221 1.4E-33 T 12-10-2018 vfu_A00015 8c6b15233fda411ba8a8d73c13766b7c 87 Gene3D G3DSA:2.30.30.100 1 72 4.7E-35 T 12-10-2018 vfu_A00015 8c6b15233fda411ba8a8d73c13766b7c 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 vfu_A00015 8c6b15233fda411ba8a8d73c13766b7c 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 vfu_A00015 8c6b15233fda411ba8a8d73c13766b7c 87 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 vfu_A00015 8c6b15233fda411ba8a8d73c13766b7c 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 12-10-2018 IPR010920 LSM domain superfamily vfu_A01703 40576313df0b189f33a9c96231480830 169 Gene3D G3DSA:3.40.630.30 1 167 1.7E-47 T 12-10-2018 vfu_A01703 40576313df0b189f33a9c96231480830 169 SUPERFAMILY SSF55729 1 148 4.87E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01703 40576313df0b189f33a9c96231480830 169 Pfam PF13527 Acetyltransferase (GNAT) domain 3 131 8.2E-12 T 12-10-2018 vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.8E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 Gene3D G3DSA:1.10.357.10 1 193 1.6E-56 T 12-10-2018 vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 104 183 5.5E-8 T 12-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 SUPERFAMILY SSF48498 80 192 2.74E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 SUPERFAMILY SSF46689 2 75 4.57E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01165 f5e111fe893d5e1f2ea29df21b681674 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 4.8E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 Gene3D G3DSA:3.40.50.1400 8 320 8.1E-95 T 12-10-2018 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 Gene3D G3DSA:3.40.50.1400 163 301 8.1E-95 T 12-10-2018 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.49 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 Pfam PF00762 Ferrochelatase 6 319 2.5E-111 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 SUPERFAMILY SSF53800 4 320 5.1E-104 T 12-10-2018 vfu_A02613 5c9e1c8c857b61dd498c16e8137fc1c8 320 TIGRFAM TIGR00109 hemH: ferrochelatase 2 319 1.7E-106 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 SMART SM00116 140 193 2.2 T 12-10-2018 IPR000644 CBS domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 SMART SM00116 204 252 0.017 T 12-10-2018 IPR000644 CBS domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 445 1.2E-107 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Gene3D G3DSA:3.10.580.10 130 256 9.3E-39 T 12-10-2018 vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 SMART SM00924 24 133 5.5E-17 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF01769 Divalent cation transporter 319 438 7.2E-27 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 SUPERFAMILY SSF158791 2 129 6.54E-21 T 12-10-2018 vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Gene3D G3DSA:1.10.357.20 271 446 1.8E-54 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Gene3D G3DSA:1.25.60.10 1 128 6.1E-12 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF00571 CBS domain 200 249 0.0016 T 12-10-2018 IPR000644 CBS domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF00571 CBS domain 133 191 1.2E-7 T 12-10-2018 IPR000644 CBS domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 Pfam PF03448 MgtE intracellular N domain 32 130 2.4E-17 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 SUPERFAMILY SSF54631 132 260 7.83E-27 T 12-10-2018 vfu_A03019 7874b296e5bee09cdfb28557e34fcb06 451 SUPERFAMILY SSF161093 279 445 2.22E-48 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 vfu_A00188 27f359be9878ab17e394a3fedccde2c6 346 Gene3D G3DSA:3.30.420.470 146 340 3.1E-13 T 12-10-2018 vfu_A00188 27f359be9878ab17e394a3fedccde2c6 346 Pfam PF13551 Winged helix-turn helix 32 87 4.6E-8 T 12-10-2018 vfu_A00188 27f359be9878ab17e394a3fedccde2c6 346 Pfam PF13592 Winged helix-turn helix 98 156 2.8E-21 T 12-10-2018 IPR025959 Winged helix-turn helix domain vfu_A00188 27f359be9878ab17e394a3fedccde2c6 346 Pfam PF13358 DDE superfamily endonuclease 167 309 6.3E-35 T 12-10-2018 IPR038717 Tc1-like transposase, DDE domain vfu_A00188 27f359be9878ab17e394a3fedccde2c6 346 SUPERFAMILY SSF53098 219 315 1.14E-7 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00188 27f359be9878ab17e394a3fedccde2c6 346 SUPERFAMILY SSF46689 15 131 2.87E-25 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A02563 39676518b5ebd092f782ab568c5a2ce7 201 PIRSF PIRSF015617 6 201 2.6E-64 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 vfu_A02563 39676518b5ebd092f782ab568c5a2ce7 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 201 1.8E-68 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 vfu_A02563 39676518b5ebd092f782ab568c5a2ce7 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 201 1.1E-57 T 12-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 vfu_A02563 39676518b5ebd092f782ab568c5a2ce7 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 26 4.9E-7 T 12-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 vfu_A02563 39676518b5ebd092f782ab568c5a2ce7 201 SUPERFAMILY SSF52540 12 201 1.02E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02563 39676518b5ebd092f782ab568c5a2ce7 201 Gene3D G3DSA:3.40.50.300 11 201 3.1E-69 T 12-10-2018 vfu_B00421 699954e9be80b5d92de4f0a43fda26ef 332 Gene3D G3DSA:3.90.550.10 1 208 7.1E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_B00421 699954e9be80b5d92de4f0a43fda26ef 332 Pfam PF00535 Glycosyl transferase family 2 8 131 1.2E-18 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 vfu_B00421 699954e9be80b5d92de4f0a43fda26ef 332 SUPERFAMILY SSF53448 2 221 1.61E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A02946 591c90f39c6359cf93913c94cd9c9cb9 162 PIRSF PIRSF005276 3 162 1.6E-60 T 12-10-2018 IPR007481 Stringent starvation protein B vfu_A02946 591c90f39c6359cf93913c94cd9c9cb9 162 Gene3D G3DSA:2.30.30.220 3 134 5.1E-51 T 12-10-2018 IPR036760 SspB-like superfamily vfu_A02946 591c90f39c6359cf93913c94cd9c9cb9 162 Pfam PF04386 Stringent starvation protein B 9 162 5.7E-42 T 12-10-2018 IPR007481 Stringent starvation protein B vfu_A02946 591c90f39c6359cf93913c94cd9c9cb9 162 SUPERFAMILY SSF101738 5 120 2.62E-48 T 12-10-2018 IPR036760 SspB-like superfamily vfu_A01480 28934a32d50999547a61f263bb68fa80 668 SUPERFAMILY SSF56935 13 668 1.25E-95 T 12-10-2018 vfu_A01480 28934a32d50999547a61f263bb68fa80 668 Pfam PF00593 TonB dependent receptor 265 666 3.6E-34 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A01480 28934a32d50999547a61f263bb68fa80 668 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 156 2.1E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_A01480 28934a32d50999547a61f263bb68fa80 668 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 651 668 - T 12-10-2018 IPR010917 TonB-dependent receptor, conserved site vfu_A01480 28934a32d50999547a61f263bb68fa80 668 Gene3D G3DSA:2.40.170.20 35 668 2.1E-100 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 Pfam PF10135 Rod binding protein 53 102 5.8E-15 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 171 307 1.0E-19 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 160 183 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 247 268 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 225 246 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 184 202 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 PRINTS PR01002 Flagellar protein FlgJ signature 290 308 2.8E-31 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 Gene3D G3DSA:2.10.70.40 199 250 5.4E-43 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 307 7.4E-103 T 12-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 Gene3D G3DSA:1.10.530.10 165 303 5.4E-43 T 12-10-2018 vfu_A01129 3af4f631045c6dee32aa5287cc01fc04 313 SMART SM00047 155 311 3.8E-45 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 vfu_A01021 e3ae1529b0effea07169427ad9e9ea9e 110 Gene3D G3DSA:3.30.429.10 1 110 2.1E-43 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily vfu_A01021 e3ae1529b0effea07169427ad9e9ea9e 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 2.5E-38 T 12-10-2018 IPR015017 Protein of unknown function DUF1904 vfu_A01021 e3ae1529b0effea07169427ad9e9ea9e 110 SUPERFAMILY SSF55331 1 110 3.97E-37 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily vfu_B01403 58f8d3a196ccca0262d1f95ead0b3e66 481 SMART SM00327 320 479 7.3E-4 T 12-10-2018 IPR002035 von Willebrand factor, type A vfu_B01403 58f8d3a196ccca0262d1f95ead0b3e66 481 Pfam PF05762 VWA domain containing CoxE-like protein 316 447 8.9E-10 T 12-10-2018 IPR008912 Uncharacterised protein family CoxE-like vfu_B01403 58f8d3a196ccca0262d1f95ead0b3e66 481 SUPERFAMILY SSF53300 319 474 5.78E-23 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B01403 58f8d3a196ccca0262d1f95ead0b3e66 481 Gene3D G3DSA:3.40.50.410 322 464 4.3E-7 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00392 238e3b0849626835febb55f753c0f8bf 76 Pfam PF02661 Fic/DOC family 4 33 1.6E-6 T 12-10-2018 IPR003812 Fido domain vfu_B00392 238e3b0849626835febb55f753c0f8bf 76 Gene3D G3DSA:1.10.3290.10 1 76 4.4E-22 T 12-10-2018 IPR036597 Fido-like domain superfamily vfu_B00392 238e3b0849626835febb55f753c0f8bf 76 SUPERFAMILY SSF140931 4 74 2.22E-17 T 12-10-2018 IPR036597 Fido-like domain superfamily vfu_A02491 1daffc7297c4909c22041bbebde4f9e5 298 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 33 232 9.8E-57 T 12-10-2018 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN vfu_A02491 1daffc7297c4909c22041bbebde4f9e5 298 SUPERFAMILY SSF159501 8 260 1.5E-71 T 12-10-2018 vfu_A02491 1daffc7297c4909c22041bbebde4f9e5 298 PIRSF PIRSF020419 1 276 1.6E-76 T 12-10-2018 IPR016773 Ferric uptake regulator, CjrA, predicted vfu_A02491 1daffc7297c4909c22041bbebde4f9e5 298 Gene3D G3DSA:1.10.8.760 132 196 2.5E-26 T 12-10-2018 vfu_A02491 1daffc7297c4909c22041bbebde4f9e5 298 Gene3D G3DSA:3.40.50.11550 26 245 2.5E-26 T 12-10-2018 vfu_A01358 d3dea88d794c83efacfffc4bf810cc0d 226 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 84 2.0E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein vfu_A01358 d3dea88d794c83efacfffc4bf810cc0d 226 Pfam PF13861 FlgD Tudor-like domain 93 222 1.3E-12 T 12-10-2018 IPR025963 FlgD Tudor-like domain vfu_A01358 d3dea88d794c83efacfffc4bf810cc0d 226 Gene3D G3DSA:2.30.30.910 99 221 5.2E-19 T 12-10-2018 vfu_A01358 d3dea88d794c83efacfffc4bf810cc0d 226 Gene3D G3DSA:2.60.40.4070 110 189 5.2E-19 T 12-10-2018 vfu_A01358 d3dea88d794c83efacfffc4bf810cc0d 226 Pfam PF13860 FlgD Ig-like domain 110 182 7.8E-11 T 12-10-2018 IPR025965 FlgD Ig-like domain vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 Gene3D G3DSA:1.20.1740.10 3 399 2.9E-12 T 12-10-2018 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 Pfam PF03222 Tryptophan/tyrosine permease family 3 386 1.7E-108 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 12-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 378 1.5E-110 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PIRSF PIRSF006060 2 296 3.0E-8 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PIRSF PIRSF006060 297 400 1.8 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 334 353 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 222 241 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 83 103 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 313 331 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 11 34 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 38 57 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 149 169 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 183 205 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_B01394 af7237cf5b5af10955bd55bb8ffad3b7 401 PRINTS PR00166 Aromatic amino acid permease signature 279 298 1.3E-79 T 12-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 vfu_A01672 6184a7ca5be439c8cdca91dd5a58664f 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01672 6184a7ca5be439c8cdca91dd5a58664f 231 SUPERFAMILY SSF55120 2 196 4.48E-46 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01672 6184a7ca5be439c8cdca91dd5a58664f 231 Gene3D G3DSA:3.30.2350.10 1 195 2.8E-47 T 12-10-2018 vfu_A01672 6184a7ca5be439c8cdca91dd5a58664f 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.4E-107 T 12-10-2018 IPR006508 Pseudouridine synthase, RluA-like vfu_A01672 6184a7ca5be439c8cdca91dd5a58664f 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 2.6E-27 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02652 9d09c8f82c2f3f14290ae9d3488054c2 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02652 9d09c8f82c2f3f14290ae9d3488054c2 373 Pfam PF01098 Cell cycle protein 24 367 6.9E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02652 9d09c8f82c2f3f14290ae9d3488054c2 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.186 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02652 9d09c8f82c2f3f14290ae9d3488054c2 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 5.7E-136 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A03141 475a41c74c2b38d1f2496415c3d7943e 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.7E-22 T 12-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain vfu_A03141 475a41c74c2b38d1f2496415c3d7943e 153 Gene3D G3DSA:3.40.1550.10 1 153 4.1E-46 T 12-10-2018 IPR028976 CheC-like superfamily vfu_A03141 475a41c74c2b38d1f2496415c3d7943e 153 SUPERFAMILY SSF103039 1 153 4.84E-38 T 12-10-2018 IPR028976 CheC-like superfamily vfu_B00303 c97c48dba80004335621f890ef6bfb81 586 SMART SM00283 316 584 2.4E-60 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00303 c97c48dba80004335621f890ef6bfb81 586 Gene3D G3DSA:1.10.287.950 254 586 4.1E-66 T 12-10-2018 vfu_B00303 c97c48dba80004335621f890ef6bfb81 586 SMART SM00304 255 308 5.9E-4 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00303 c97c48dba80004335621f890ef6bfb81 586 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 369 551 7.7E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00303 c97c48dba80004335621f890ef6bfb81 586 SUPERFAMILY SSF58104 278 585 2.75E-69 T 12-10-2018 vfu_A02289 fc4add4746b511d50bf0d1650d130035 191 SUPERFAMILY SSF52218 5 175 8.54E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A02289 fc4add4746b511d50bf0d1650d130035 191 Pfam PF03358 NADPH-dependent FMN reductase 5 148 7.5E-33 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 vfu_A02289 fc4add4746b511d50bf0d1650d130035 191 Gene3D G3DSA:3.40.50.360 4 182 4.1E-45 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01375 6ef39035b63532061277f8c45a9c6a07 435 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 428 7.9E-126 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A01375 6ef39035b63532061277f8c45a9c6a07 435 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 423 1.3E-112 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_A01375 6ef39035b63532061277f8c45a9c6a07 435 PIRSF PIRSF006066 6 434 6.6E-153 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A03080 2140c868db596b6df38c4ffa583fc5a7 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 7.4E-45 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03080 2140c868db596b6df38c4ffa583fc5a7 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.7E-41 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03080 2140c868db596b6df38c4ffa583fc5a7 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.55 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A03080 2140c868db596b6df38c4ffa583fc5a7 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A03080 2140c868db596b6df38c4ffa583fc5a7 103 SUPERFAMILY SSF141091 1 102 4.71E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A01289 8e9e29f3171e72f7ac9e474ce0a417d4 71 Gene3D G3DSA:1.10.3390.10 1 71 7.0E-31 T 12-10-2018 IPR023202 YejL-like superfamily vfu_A01289 8e9e29f3171e72f7ac9e474ce0a417d4 71 PIRSF PIRSF006188 1 71 1.2E-35 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 vfu_A01289 8e9e29f3171e72f7ac9e474ce0a417d4 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.5E-20 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 vfu_A01289 8e9e29f3171e72f7ac9e474ce0a417d4 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.25 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 vfu_A01289 8e9e29f3171e72f7ac9e474ce0a417d4 71 SUPERFAMILY SSF158651 1 70 1.02E-28 T 12-10-2018 IPR023202 YejL-like superfamily vfu_A01289 8e9e29f3171e72f7ac9e474ce0a417d4 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 9.0E-29 T 12-10-2018 IPR009857 Uncharacterised protein family UPF0352 vfu_A02987 fb72264f05743d1bb004054ee97d3c72 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 9.9E-69 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 vfu_A02987 fb72264f05743d1bb004054ee97d3c72 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.961 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 vfu_A02987 fb72264f05743d1bb004054ee97d3c72 158 Gene3D G3DSA:3.30.1330.50 1 158 1.0E-69 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 vfu_A02987 fb72264f05743d1bb004054ee97d3c72 158 Pfam PF02542 YgbB family 2 155 3.0E-65 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 vfu_A02987 fb72264f05743d1bb004054ee97d3c72 158 SUPERFAMILY SSF69765 1 157 2.88E-65 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 vfu_A02987 fb72264f05743d1bb004054ee97d3c72 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.0E-6 T 12-10-2018 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.0E-6 T 12-10-2018 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.0E-6 T 12-10-2018 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 Gene3D G3DSA:1.20.200.10 134 400 9.9E-98 T 12-10-2018 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 Pfam PF10415 Fumarase C C-terminus 403 455 1.8E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 Pfam PF00206 Lyase 13 337 5.9E-92 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 SUPERFAMILY SSF48557 5 454 5.34E-137 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 Gene3D G3DSA:1.10.275.10 6 133 8.1E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 9.3E-31 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 9.3E-31 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 9.3E-31 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 9.3E-31 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 Gene3D G3DSA:1.10.40.30 403 454 3.5E-20 T 12-10-2018 vfu_A01671 fcce6e7c54ce91e0e22624fa0d77af90 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 75.686 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 vfu_B00190 03087f49fb3e213d7d49c75721a132da 358 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 29 315 9.9E-52 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 vfu_B00190 03087f49fb3e213d7d49c75721a132da 358 Gene3D G3DSA:3.40.50.2300 132 348 1.5E-131 T 12-10-2018 vfu_B00190 03087f49fb3e213d7d49c75721a132da 358 Gene3D G3DSA:3.40.50.2300 29 285 1.5E-131 T 12-10-2018 vfu_B00190 03087f49fb3e213d7d49c75721a132da 358 SUPERFAMILY SSF53822 175 228 2.88E-5 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_B01167 7c3daf55b3060a880cace24deb408968 281 Pfam PF00892 EamA-like transporter family 4 135 4.4E-8 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01167 7c3daf55b3060a880cace24deb408968 281 Pfam PF00892 EamA-like transporter family 145 275 9.7E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01167 7c3daf55b3060a880cace24deb408968 281 SUPERFAMILY SSF103481 39 139 4.05E-9 T 12-10-2018 vfu_B01167 7c3daf55b3060a880cace24deb408968 281 SUPERFAMILY SSF103481 185 278 4.18E-11 T 12-10-2018 vfu_B00966 92b50fadeb911c095778c6c506657705 232 Pfam PF00171 Aldehyde dehydrogenase family 45 177 5.6E-6 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_B00966 92b50fadeb911c095778c6c506657705 232 Gene3D G3DSA:3.40.605.10 33 222 1.9E-10 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00966 92b50fadeb911c095778c6c506657705 232 SUPERFAMILY SSF53720 10 179 1.15E-10 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B01227 b8438dce72dbb3f180708b04dfdaffcc 745 Gene3D G3DSA:2.160.20.10 379 728 1.1E-60 T 12-10-2018 IPR012334 Pectin lyase fold vfu_B01227 b8438dce72dbb3f180708b04dfdaffcc 745 SUPERFAMILY SSF51126 390 699 5.93E-42 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 SUPERFAMILY SSF52467 224 364 9.81E-8 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Gene3D G3DSA:3.40.50.970 365 569 1.6E-52 T 12-10-2018 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 173 3.2E-29 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 PIRSF PIRSF004983 3 570 1.3E-187 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 548 2.2E-5 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 SUPERFAMILY SSF52518 376 566 3.21E-26 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 33.174 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 401 5.6E-41 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Gene3D G3DSA:3.40.50.970 4 201 3.6E-58 T 12-10-2018 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 1.6E-135 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 Gene3D G3DSA:3.40.50.1220 218 344 2.5E-40 T 12-10-2018 vfu_A01339 c09772cde178f54c48024067b34aa4f4 570 SUPERFAMILY SSF52518 9 185 1.12E-31 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_B01409 e1aebf06fe3aa6d772bb4e5747323bf1 299 Gene3D G3DSA:1.40.20.10 14 298 2.6E-48 T 12-10-2018 IPR038186 CHAD domain superfamily vfu_B01409 e1aebf06fe3aa6d772bb4e5747323bf1 299 SMART SM00880 31 290 5.5E-29 T 12-10-2018 IPR007899 CHAD domain vfu_B01409 e1aebf06fe3aa6d772bb4e5747323bf1 299 Pfam PF05235 CHAD domain 34 252 2.7E-37 T 12-10-2018 IPR007899 CHAD domain vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 Gene3D G3DSA:3.40.50.2300 55 304 3.0E-69 T 12-10-2018 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 Gene3D G3DSA:3.40.50.2300 161 290 3.0E-69 T 12-10-2018 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 272 6.8E-36 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 SUPERFAMILY SSF53822 61 331 5.34E-72 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 Gene3D G3DSA:1.10.260.40 1 54 1.3E-22 T 12-10-2018 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 SUPERFAMILY SSF47413 1 59 2.39E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A01485 a461fae26a64f4349d14a5078fcad508 334 SMART SM00354 1 71 2.7E-34 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 SUPERFAMILY SSF116726 294 377 1.96E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 560 58.49 T 12-10-2018 IPR023017 Transport protein YbjL, putative vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 9.5E-31 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 393 544 8.1E-37 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Pfam PF02080 TrkA-C domain 230 281 1.1E-8 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Pfam PF02080 TrkA-C domain 309 374 2.9E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 SUPERFAMILY SSF116726 230 285 2.75E-10 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.8E-38 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Pfam PF06826 Predicted Permease Membrane Region 389 557 1.7E-42 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Gene3D G3DSA:3.30.70.1450 226 291 3.1E-9 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A02310 b94909678410fe8e4ea8935d9902166e 560 Gene3D G3DSA:3.30.70.1450 294 373 1.2E-5 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_A02760 10a8dff939a456ae4005c1a4b31e0a2f 262 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 16 260 7.6E-60 T 12-10-2018 IPR014147 Type IV conjugative transfer protein TrbJ vfu_A02760 10a8dff939a456ae4005c1a4b31e0a2f 262 SUPERFAMILY SSF101082 33 227 4.05E-34 T 12-10-2018 vfu_B00162 a499aa763783aa5818736192370aa24f 382 Pfam PF00155 Aminotransferase class I and II 27 375 9.8E-40 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B00162 a499aa763783aa5818736192370aa24f 382 Gene3D G3DSA:3.40.640.10 60 273 2.0E-112 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00162 a499aa763783aa5818736192370aa24f 382 Gene3D G3DSA:3.90.1150.10 15 378 2.0E-112 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00162 a499aa763783aa5818736192370aa24f 382 SUPERFAMILY SSF53383 3 380 1.13E-94 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00152 64e1c816e73b93835a8cb1352900dd78 369 Gene3D G3DSA:1.10.10.800 206 297 4.8E-118 T 12-10-2018 vfu_B00152 64e1c816e73b93835a8cb1352900dd78 369 SUPERFAMILY SSF53474 48 368 2.57E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00152 64e1c816e73b93835a8cb1352900dd78 369 Gene3D G3DSA:3.40.50.1820 73 352 4.8E-118 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00152 64e1c816e73b93835a8cb1352900dd78 369 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 21 47 2.4E-4 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal vfu_B00152 64e1c816e73b93835a8cb1352900dd78 369 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 79 219 4.2E-8 T 12-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 vfu_B00105 57c98c8476d1b33bdbe1ed002205db9b 277 SUPERFAMILY SSF46689 205 259 4.3E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00105 57c98c8476d1b33bdbe1ed002205db9b 277 SMART SM00342 168 253 1.3E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00105 57c98c8476d1b33bdbe1ed002205db9b 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 205 249 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_B00105 57c98c8476d1b33bdbe1ed002205db9b 277 SUPERFAMILY SSF46689 152 202 5.22E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00105 57c98c8476d1b33bdbe1ed002205db9b 277 Pfam PF12833 Helix-turn-helix domain 174 255 1.5E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00105 57c98c8476d1b33bdbe1ed002205db9b 277 Gene3D G3DSA:1.10.10.60 151 257 3.8E-30 T 12-10-2018 vfu_A02409 a611b32a21d1fe1b6231b4e7619233b7 530 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 516 2.9E-304 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 vfu_A02409 a611b32a21d1fe1b6231b4e7619233b7 530 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 530 377.824 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 vfu_A02409 a611b32a21d1fe1b6231b4e7619233b7 530 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 515 7.0E-297 T 12-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 SUPERFAMILY SSF53335 7 267 2.94E-56 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 172 178 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 Pfam PF13847 Methyltransferase domain 103 232 1.8E-16 T 12-10-2018 IPR025714 Methyltransferase domain vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 14 263 3.9E-90 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 Gene3D G3DSA:3.40.50.150 76 268 2.4E-58 T 12-10-2018 vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 Gene3D G3DSA:1.10.8.10 1 75 6.2E-23 T 12-10-2018 vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 269 1.8E-76 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 vfu_A01143 486edbc679816cbe62424f61a970eb4e 278 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 267 43.38 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 vfu_A00412 09eb63d10c7725b39459d40d107247e5 58 Gene3D G3DSA:3.40.50.150 1 58 9.8E-13 T 12-10-2018 vfu_A00412 09eb63d10c7725b39459d40d107247e5 58 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 57 1.1E-23 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 vfu_A02558 945de1371a091dd0799729e98ef231f6 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 48 64 2.8E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A02558 945de1371a091dd0799729e98ef231f6 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 2.8E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A02558 945de1371a091dd0799729e98ef231f6 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 2.8E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A02558 945de1371a091dd0799729e98ef231f6 158 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 2.8E-21 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 vfu_A02558 945de1371a091dd0799729e98ef231f6 158 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 149 4.4E-38 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I vfu_A02558 945de1371a091dd0799729e98ef231f6 158 Gene3D G3DSA:3.40.50.2300 5 158 1.5E-58 T 12-10-2018 vfu_A02558 945de1371a091dd0799729e98ef231f6 158 SMART SM00226 5 151 1.3E-42 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I vfu_A02558 945de1371a091dd0799729e98ef231f6 158 SUPERFAMILY SSF52788 3 149 7.85E-48 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 Gene3D G3DSA:2.160.10.10 143 273 2.6E-37 T 12-10-2018 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 1.5E-8 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 3.6E-38 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 PIRSF PIRSF000441 75 266 2.1E-56 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 PIRSF PIRSF000441 7 69 450.0 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 SMART SM00971 9 113 3.9E-60 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.4E-74 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 Gene3D G3DSA:1.10.3130.10 1 142 5.8E-52 T 12-10-2018 vfu_A00616 5c23bdebe91b596b3e27765accdb8ba0 273 SUPERFAMILY SSF51161 9 259 3.88E-63 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A00747 8d7074435c9dc8639dce45760c59b925 246 SUPERFAMILY SSF69593 7 236 2.22E-55 T 12-10-2018 vfu_A00747 8d7074435c9dc8639dce45760c59b925 246 SMART SM00563 67 182 8.8E-42 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A00747 8d7074435c9dc8639dce45760c59b925 246 Pfam PF01553 Acyltransferase 60 180 1.2E-31 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A00747 8d7074435c9dc8639dce45760c59b925 246 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 2.8E-43 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 SMART SM00382 32 238 1.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 4.9E-23 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 Pfam PF00005 ABC transporter 24 180 1.8E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 Gene3D G3DSA:3.40.50.300 1 321 1.9E-97 T 12-10-2018 vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 5.1E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01536 190102738fef675516bbb4dd9ed8bc85 323 SUPERFAMILY SSF52540 31 301 9.21E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01967 f60434bc79b9f5d3e0216f314f830b1c 105 Pfam PF00355 Rieske [2Fe-2S] domain 4 89 2.0E-17 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 vfu_A01967 f60434bc79b9f5d3e0216f314f830b1c 105 SUPERFAMILY SSF50022 1 103 6.55E-29 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A01967 f60434bc79b9f5d3e0216f314f830b1c 105 Gene3D G3DSA:2.102.10.10 1 105 9.6E-34 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_B01448 24f576d39b5a929ed5b784839f3d5191 267 PIRSF PIRSF002854 1 267 1.9E-90 T 12-10-2018 IPR004872 Lipoprotein NlpA family vfu_B01448 24f576d39b5a929ed5b784839f3d5191 267 Gene3D G3DSA:3.40.190.10 112 217 3.8E-92 T 12-10-2018 vfu_B01448 24f576d39b5a929ed5b784839f3d5191 267 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 20 263 1.1E-68 T 12-10-2018 IPR004872 Lipoprotein NlpA family vfu_B01448 24f576d39b5a929ed5b784839f3d5191 267 SUPERFAMILY SSF53850 30 267 6.43E-82 T 12-10-2018 vfu_B01448 24f576d39b5a929ed5b784839f3d5191 267 Gene3D G3DSA:3.40.190.10 32 262 3.8E-92 T 12-10-2018 vfu_B01448 24f576d39b5a929ed5b784839f3d5191 267 Pfam PF03180 NLPA lipoprotein 31 267 8.9E-87 T 12-10-2018 IPR004872 Lipoprotein NlpA family vfu_A01722 15a8770abb102150157239ba6411ac39 425 SUPERFAMILY SSF56954 11 420 5.36E-83 T 12-10-2018 vfu_A01722 15a8770abb102150157239ba6411ac39 425 Gene3D G3DSA:1.20.1600.10 10 422 9.2E-79 T 12-10-2018 vfu_A01722 15a8770abb102150157239ba6411ac39 425 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 9 420 1.9E-116 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 vfu_A01722 15a8770abb102150157239ba6411ac39 425 Pfam PF02321 Outer membrane efflux protein 221 405 2.4E-24 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A01722 15a8770abb102150157239ba6411ac39 425 Pfam PF02321 Outer membrane efflux protein 12 201 2.0E-25 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A02393 02c28d478952109e38f8b16a1f5696fa 374 Pfam PF02687 FtsX-like permease family 268 367 6.1E-14 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 vfu_A02393 02c28d478952109e38f8b16a1f5696fa 374 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 1 374 2.0E-120 T 12-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 vfu_A02393 02c28d478952109e38f8b16a1f5696fa 374 Pfam PF12704 MacB-like periplasmic core domain 2 175 1.2E-14 T 12-10-2018 IPR025857 MacB-like periplasmic core domain vfu_A01924 24feb9bded2a04b3bae8484cd897788f 582 Pfam PF11949 Protein of unknown function (DUF3466) 296 582 5.0E-53 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 vfu_A01924 24feb9bded2a04b3bae8484cd897788f 582 Pfam PF11949 Protein of unknown function (DUF3466) 8 231 5.9E-8 T 12-10-2018 IPR022562 Protein of unknown function DUF3466 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 SUPERFAMILY SSF52374 5 334 2.65E-89 T 12-10-2018 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Gene3D G3DSA:3.40.50.620 5 333 2.8E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.291 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Gene3D G3DSA:1.10.240.10 191 304 2.8E-137 T 12-10-2018 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 7.9E-77 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00640 a792bd1bbaf6e54b7ad5e9f18f5ee011 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 7.9E-106 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 Gene3D G3DSA:3.40.50.20 1 129 1.6E-51 T 12-10-2018 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 SUPERFAMILY SSF56059 123 313 4.86E-60 T 12-10-2018 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 SUPERFAMILY SSF52440 2 122 1.73E-46 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 1.9E-139 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 Gene3D G3DSA:3.30.470.20 197 300 3.2E-40 T 12-10-2018 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 8.1E-48 T 12-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 9.2E-81 T 12-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.615 T 12-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 vfu_A03046 138e5d1ba4f70ce09bfc7996c48306bd 318 Gene3D G3DSA:3.30.1490.20 137 196 7.4E-30 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A02028 bf2cebebbc21cd03d1358ea51baf35c8 106 Pfam PF08895 Domain of unknown function (DUF1840) 1 102 2.3E-33 T 12-10-2018 IPR014991 Protein of unknown function DUF1840 vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.1E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 SUPERFAMILY SSF46689 7 82 5.49E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 64 189 7.1E-9 T 12-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal vfu_A00251 7730df54ceb3661cbb69c001f737fc29 192 Gene3D G3DSA:1.10.357.10 3 192 3.8E-64 T 12-10-2018 vfu_B00175 cd4372095eb439d1c8cf4824f0d25c14 272 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 79 8.9E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 vfu_B00175 cd4372095eb439d1c8cf4824f0d25c14 272 Pfam PF01380 SIS domain 121 244 1.1E-8 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_B00175 cd4372095eb439d1c8cf4824f0d25c14 272 SUPERFAMILY SSF53697 94 252 5.12E-12 T 12-10-2018 vfu_B00175 cd4372095eb439d1c8cf4824f0d25c14 272 Gene3D G3DSA:1.10.10.10 2 81 1.7E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00175 cd4372095eb439d1c8cf4824f0d25c14 272 Gene3D G3DSA:3.40.50.10490 90 267 8.4E-20 T 12-10-2018 vfu_B00175 cd4372095eb439d1c8cf4824f0d25c14 272 SUPERFAMILY SSF46689 6 83 5.73E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01798 160e1415a4f29ed465db32e9d5c7ef48 217 SUPERFAMILY SSF55469 1 216 9.95E-63 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A01798 160e1415a4f29ed465db32e9d5c7ef48 217 Pfam PF00881 Nitroreductase family 8 193 2.6E-28 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 vfu_A01798 160e1415a4f29ed465db32e9d5c7ef48 217 Gene3D G3DSA:3.40.109.10 1 217 1.0E-57 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 vfu_A00487 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 Gene3D G3DSA:3.90.1490.10 143 218 4.7E-6 T 12-10-2018 vfu_A00487 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 SUPERFAMILY SSF52402 1 215 4.38E-53 T 12-10-2018 vfu_A00487 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 Gene3D G3DSA:3.40.50.620 1 142 8.5E-18 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00487 edf50fe0d9cf5e39f55ff07a08cdaa2d 224 Pfam PF01902 Diphthamide synthase 3 212 5.3E-23 T 12-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 vfu_A01058 db9733a7b77dc5759814c9ad38c18146 149 Pfam PF03477 ATP cone domain 50 136 1.0E-16 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 vfu_A01058 db9733a7b77dc5759814c9ad38c18146 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-72 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 vfu_A01058 db9733a7b77dc5759814c9ad38c18146 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.95 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 vfu_A03033 6618ca295b341e08c9b69bc0a73dde68 161 Pfam PF04073 Aminoacyl-tRNA editing domain 35 149 3.6E-23 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 vfu_A03033 6618ca295b341e08c9b69bc0a73dde68 161 Gene3D G3DSA:3.90.960.10 4 161 1.8E-30 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A03033 6618ca295b341e08c9b69bc0a73dde68 161 SUPERFAMILY SSF55826 7 155 9.55E-34 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_B00841 a55b67910ba020cd57d818b622eed79c 717 Gene3D G3DSA:2.170.130.10 67 188 3.9E-34 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_B00841 a55b67910ba020cd57d818b622eed79c 717 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 717 1.9E-81 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_B00841 a55b67910ba020cd57d818b622eed79c 717 Pfam PF00593 TonB dependent receptor 265 715 9.3E-47 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_B00841 a55b67910ba020cd57d818b622eed79c 717 Gene3D G3DSA:2.40.170.20 189 717 5.1E-101 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_B00841 a55b67910ba020cd57d818b622eed79c 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 85 178 6.4E-19 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_B00841 a55b67910ba020cd57d818b622eed79c 717 SUPERFAMILY SSF56935 50 717 5.86E-120 T 12-10-2018 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 114 137 - T 12-10-2018 IPR025505 FHIPEP conserved site vfu_A02245 05e861c547f1f09f306787b4e8205163 672 Gene3D G3DSA:1.10.490.80 566 670 8.6E-9 T 12-10-2018 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 42 61 5.5E-53 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 158 175 5.5E-53 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 209 223 5.5E-53 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 5 18 5.5E-53 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 109 125 5.5E-53 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 128 146 5.5E-53 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 Gene3D G3DSA:3.40.30.60 332 475 9.4E-42 T 12-10-2018 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 PIRSF PIRSF005419 1 672 2.1E-212 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 Gene3D G3DSA:1.10.8.540 476 562 1.5E-13 T 12-10-2018 vfu_A02245 05e861c547f1f09f306787b4e8205163 672 Pfam PF00771 FHIPEP family 1 662 3.4E-227 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 vfu_A01013 c41fbe4367eaffb26ac9f890a7a8a930 274 SUPERFAMILY SSF52540 5 234 1.82E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01013 c41fbe4367eaffb26ac9f890a7a8a930 274 SMART SM00382 33 215 3.7E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01013 c41fbe4367eaffb26ac9f890a7a8a930 274 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01013 c41fbe4367eaffb26ac9f890a7a8a930 274 Gene3D G3DSA:3.40.50.300 3 238 7.6E-65 T 12-10-2018 vfu_A01013 c41fbe4367eaffb26ac9f890a7a8a930 274 Pfam PF00005 ABC transporter 24 164 4.6E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01154 eb925d923e65c09bc2a0236361896546 116 Pfam PF03960 ArsC family 6 115 9.0E-21 T 12-10-2018 IPR006660 Arsenate reductase-like vfu_A01154 eb925d923e65c09bc2a0236361896546 116 Gene3D G3DSA:3.40.30.10 1 116 1.4E-48 T 12-10-2018 vfu_A01154 eb925d923e65c09bc2a0236361896546 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 4.0E-48 T 12-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 vfu_A01154 eb925d923e65c09bc2a0236361896546 116 SUPERFAMILY SSF52833 2 116 7.23E-35 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01528 c71218bfd02f428164c879a00c1d38b1 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 28 238 2.7E-74 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal vfu_A01291 897f53030ca54fbcea17e5df61c5376c 396 Gene3D G3DSA:1.20.120.160 284 394 3.6E-19 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A01291 897f53030ca54fbcea17e5df61c5376c 396 SUPERFAMILY SSF47226 287 377 2.09E-16 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 vfu_A01291 897f53030ca54fbcea17e5df61c5376c 396 SMART SM00073 296 391 9.5E-4 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A01291 897f53030ca54fbcea17e5df61c5376c 396 Pfam PF01627 Hpt domain 306 382 7.2E-11 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 277 31.982 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 Gene3D G3DSA:3.30.70.890 168 285 1.2E-28 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 SUPERFAMILY SSF55060 167 282 5.76E-34 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 Gene3D G3DSA:3.30.230.10 5 165 1.9E-54 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 PIRSF PIRSF010376 9 285 9.7E-86 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 Pfam PF00288 GHMP kinases N terminal domain 93 150 3.9E-9 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 10 284 1.3E-92 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 Pfam PF08544 GHMP kinases C terminal 201 263 1.3E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain vfu_A01139 5a5c4b260e879698495b3dc20868293c 295 SUPERFAMILY SSF54211 11 164 3.87E-45 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 8.7E-62 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 7.9E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 7.9E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 7.9E-19 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 Gene3D G3DSA:2.40.50.100 73 151 9.9E-33 T 12-10-2018 vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 SUPERFAMILY SSF51230 76 151 1.03E-26 T 12-10-2018 IPR011053 Single hybrid motif vfu_A00068 e29607532e5fec04d7f40f243ab16b2b 151 Pfam PF00364 Biotin-requiring enzyme 78 150 2.1E-25 T 12-10-2018 IPR000089 Biotin/lipoyl attachment vfu_A00119 046fdd95a3c962b300b6ba27ebc4f668 276 SUPERFAMILY SSF53448 7 238 4.13E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00119 046fdd95a3c962b300b6ba27ebc4f668 276 Pfam PF00535 Glycosyl transferase family 2 11 135 1.2E-10 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 vfu_A00119 046fdd95a3c962b300b6ba27ebc4f668 276 Gene3D G3DSA:3.90.550.10 3 254 1.5E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 SUPERFAMILY SSF55785 22 114 3.14E-23 T 12-10-2018 IPR035965 PAS domain superfamily vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 2.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 272 301 2.9E-5 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 485 7.5E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 SMART SM00283 256 519 1.3E-55 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 SUPERFAMILY SSF58104 250 520 1.48E-61 T 12-10-2018 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 Gene3D G3DSA:3.30.450.20 12 146 9.2E-22 T 12-10-2018 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 110 8.1E-7 T 12-10-2018 IPR000014 PAS domain vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 Gene3D G3DSA:1.10.287.950 190 520 8.7E-58 T 12-10-2018 vfu_B01207 13052ae2418c85f57a6e8cf0c050d622 521 Pfam PF08447 PAS fold 32 115 2.3E-13 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 vfu_A00022 268ce2b97b8249bdf1bc9d4fbc62bee0 181 SUPERFAMILY SSF53098 3 179 9.83E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00022 268ce2b97b8249bdf1bc9d4fbc62bee0 181 SMART SM00479 7 180 1.2E-20 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A00022 268ce2b97b8249bdf1bc9d4fbc62bee0 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.479 T 12-10-2018 IPR022894 Oligoribonuclease GO:0000175 vfu_A00022 268ce2b97b8249bdf1bc9d4fbc62bee0 181 Pfam PF00929 Exonuclease 9 170 3.2E-35 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A00022 268ce2b97b8249bdf1bc9d4fbc62bee0 181 Gene3D G3DSA:3.30.420.10 1 181 2.4E-74 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_B00269 09d8b99ca220c6fa2101e5ff38a68ca8 393 Pfam PF00155 Aminotransferase class I and II 46 378 7.3E-36 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_B00269 09d8b99ca220c6fa2101e5ff38a68ca8 393 Gene3D G3DSA:3.40.640.10 59 290 9.4E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00269 09d8b99ca220c6fa2101e5ff38a68ca8 393 SUPERFAMILY SSF53383 38 387 6.65E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B00269 09d8b99ca220c6fa2101e5ff38a68ca8 393 Gene3D G3DSA:3.90.1150.10 21 381 9.4E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00854 00c2bd954fb46b35d6dd9a9a0846d7a5 309 Pfam PF13515 Fusaric acid resistance protein-like 155 288 3.0E-6 T 12-10-2018 vfu_B00854 00c2bd954fb46b35d6dd9a9a0846d7a5 309 Pfam PF11168 Protein of unknown function (DUF2955) 1 116 1.3E-36 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 vfu_B00854 00c2bd954fb46b35d6dd9a9a0846d7a5 309 PIRSF PIRSF029594 1 307 2.0E-122 T 12-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 vfu_A01559 0045064381f7f405cf5e7527c61fb1b5 194 SMART SM01012 131 186 6.1E-20 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 vfu_A01559 0045064381f7f405cf5e7527c61fb1b5 194 SUPERFAMILY SSF52172 7 186 2.04E-24 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01559 0045064381f7f405cf5e7527c61fb1b5 194 Pfam PF03861 ANTAR domain 134 186 4.3E-19 T 12-10-2018 IPR005561 ANTAR domain GO:0003723 vfu_A01559 0045064381f7f405cf5e7527c61fb1b5 194 Gene3D G3DSA:1.10.10.10 133 191 1.3E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00203 3881a9f5c553bd6e9e9d3a32a2626d1f 458 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 456 1.2E-201 T 12-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 vfu_B00203 3881a9f5c553bd6e9e9d3a32a2626d1f 458 SUPERFAMILY SSF52467 285 458 1.68E-79 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily vfu_B00203 3881a9f5c553bd6e9e9d3a32a2626d1f 458 PIRSF PIRSF000204 1 458 8.6E-235 T 12-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 vfu_B00203 3881a9f5c553bd6e9e9d3a32a2626d1f 458 Gene3D G3DSA:3.40.50.1220 282 458 7.7E-89 T 12-10-2018 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 PIRSF PIRSF000521 3 127 2.0E-6 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 PIRSF PIRSF000521 122 422 2.3E-41 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 4.2E-178 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 Gene3D G3DSA:3.90.1150.10 7 413 9.2E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 SUPERFAMILY SSF53383 19 420 2.25E-132 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 Gene3D G3DSA:3.40.640.10 58 317 9.2E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02168 cab4e673084551b5fcca2678e2645f2f 423 Pfam PF00202 Aminotransferase class-III 20 419 2.7E-130 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 9.2E-50 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 1.3E-59 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 1.3E-275 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 SUPERFAMILY SSF52467 190 363 1.55E-64 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 SUPERFAMILY SSF52518 1 182 8.84E-66 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 Gene3D G3DSA:3.40.50.1220 191 362 6.0E-61 T 12-10-2018 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 331 1.8E-46 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 Gene3D G3DSA:3.40.50.970 364 573 3.7E-66 T 12-10-2018 vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 SUPERFAMILY SSF52518 372 566 2.95E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A00814 b9c8bb7286615f07a20bab34bc40d374 573 Gene3D G3DSA:3.40.50.970 1 183 1.4E-74 T 12-10-2018 vfu_A02856 14cdd759be8b0c26f6c9e74e47c81510 372 Pfam PF13614 AAA domain 121 278 2.0E-9 T 12-10-2018 IPR025669 AAA domain vfu_A02856 14cdd759be8b0c26f6c9e74e47c81510 372 Gene3D G3DSA:3.40.50.300 118 357 1.7E-44 T 12-10-2018 vfu_A02856 14cdd759be8b0c26f6c9e74e47c81510 372 SUPERFAMILY SSF52540 121 359 3.87E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00531 88c583b84fef067800fd88537d0ebfe7 444 Pfam PF02264 LamB porin 46 444 7.0E-92 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_B00531 88c583b84fef067800fd88537d0ebfe7 444 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 50 415 2.0E-23 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_B00531 88c583b84fef067800fd88537d0ebfe7 444 Gene3D G3DSA:2.40.170.10 42 444 1.4E-93 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 vfu_B00531 88c583b84fef067800fd88537d0ebfe7 444 SUPERFAMILY SSF56935 44 444 4.39E-86 T 12-10-2018 vfu_A00201 996a3003677a048074d5e28cb63396f8 111 Pfam PF11666 Protein of unknown function (DUF2933) 19 68 1.5E-20 T 12-10-2018 IPR021682 Protein of unknown function DUF2933 vfu_A03100 39fdf96626c89df5b955460dcaac5bd7 295 Gene3D G3DSA:2.40.10.350 180 257 3.2E-36 T 12-10-2018 vfu_A03100 39fdf96626c89df5b955460dcaac5bd7 295 Pfam PF04085 rod shape-determining protein MreC 123 269 5.6E-40 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 vfu_A03100 39fdf96626c89df5b955460dcaac5bd7 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 280 4.6E-88 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 vfu_A03100 39fdf96626c89df5b955460dcaac5bd7 295 PIRSF PIRSF038471 2 284 3.1E-79 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 vfu_A03100 39fdf96626c89df5b955460dcaac5bd7 295 Gene3D G3DSA:2.40.10.340 122 266 3.2E-36 T 12-10-2018 vfu_A02037 7c8390cef22f9c8fc4139454ac1e179d 336 Pfam PF00990 Diguanylate cyclase, GGDEF domain 163 317 9.9E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_A02037 7c8390cef22f9c8fc4139454ac1e179d 336 SMART SM00267 152 321 2.0E-47 T 12-10-2018 IPR000160 GGDEF domain vfu_A02037 7c8390cef22f9c8fc4139454ac1e179d 336 SUPERFAMILY SSF55073 168 320 1.88E-39 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A02037 7c8390cef22f9c8fc4139454ac1e179d 336 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 161 320 1.2E-39 T 12-10-2018 IPR000160 GGDEF domain vfu_A02037 7c8390cef22f9c8fc4139454ac1e179d 336 Gene3D G3DSA:3.30.70.270 157 327 3.3E-45 T 12-10-2018 vfu_B00564 239373a0d149b807478cbaab5d676253 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_B00564 239373a0d149b807478cbaab5d676253 506 SUPERFAMILY SSF53720 11 497 2.62E-163 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B00564 239373a0d149b807478cbaab5d676253 506 Gene3D G3DSA:3.40.605.10 23 492 2.5E-166 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00564 239373a0d149b807478cbaab5d676253 506 Gene3D G3DSA:3.40.309.10 266 464 2.5E-166 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_B00564 239373a0d149b807478cbaab5d676253 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_B00564 239373a0d149b807478cbaab5d676253 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.6E-167 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_B00333 511321c7e4a3c9fc61e6adcd6f3f5447 209 Pfam PF07947 YhhN family 24 203 2.9E-48 T 12-10-2018 IPR012506 YhhN-like GO:0016021 vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PIRSF PIRSF002869 1 518 5.4E-151 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 Pfam PF03023 MviN-like protein 30 478 2.7E-140 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 7.4E-135 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.792 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 54 70 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 35 54 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 142 166 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 166 187 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 268 294 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 418 435 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00979 8772673d1ab7df39d88311db3e66be66 520 PRINTS PR01806 Virulence factor MviN signature 366 385 2.0E-76 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A01550 dd556042aae7242de676075db9605e66 206 SUPERFAMILY SSF103642 186 205 1.96E-7 T 12-10-2018 vfu_A01550 dd556042aae7242de676075db9605e66 206 Gene3D G3DSA:3.10.450.50 153 206 1.8E-9 T 12-10-2018 vfu_A01550 dd556042aae7242de676075db9605e66 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 8 162 1.2E-7 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 vfu_A01550 dd556042aae7242de676075db9605e66 206 SUPERFAMILY SSF101327 9 118 4.58E-6 T 12-10-2018 IPR036255 YgfB-like superfamily vfu_A01550 dd556042aae7242de676075db9605e66 206 Pfam PF02810 SEC-C motif 188 206 1.9E-10 T 12-10-2018 IPR004027 SEC-C motif vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 486 1.7E-131 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 263 317 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 SUPERFAMILY SSF81442 26 540 2.75E-175 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 210 229 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 149 161 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 366 384 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 80 103 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 181 199 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 331 352 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 30 55 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 261 282 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 394 413 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 444 465 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 107 131 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 307 322 2.0E-92 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 1 631 0.0 T 12-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 vfu_B01001 ba1d7f4fbc33915e31e47de389dc652d 662 Gene3D G3DSA:1.20.210.10 35 535 2.7E-184 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00478 a205b8cdc738831748d14a40b765ca57 120 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 71 82 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 vfu_A00478 a205b8cdc738831748d14a40b765ca57 120 Gene3D G3DSA:1.10.3830.10 3 120 1.3E-39 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 vfu_A00478 a205b8cdc738831748d14a40b765ca57 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 115 5.3E-35 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 6.8E-11 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 6.8E-11 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 6.8E-11 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 6.8E-11 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 6.8E-11 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 SUPERFAMILY SSF64518 131 457 6.54E-28 T 12-10-2018 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 456 5.7E-117 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 Pfam PF00460 Flagella basal body rod protein 5 33 1.6E-8 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01365 5f9ff77585a757db6ab6818891ac5a49 457 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 410 456 1.3E-6 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A03059 a25c3fd0cd2ba99a984d0fe17e9a5058 284 SUPERFAMILY SSF53335 61 283 1.22E-35 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A03059 a25c3fd0cd2ba99a984d0fe17e9a5058 284 Pfam PF02390 Putative methyltransferase 107 277 1.5E-58 T 12-10-2018 vfu_A03059 a25c3fd0cd2ba99a984d0fe17e9a5058 284 Gene3D G3DSA:3.40.50.150 74 284 4.9E-71 T 12-10-2018 vfu_A03059 a25c3fd0cd2ba99a984d0fe17e9a5058 284 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 92 283 1.2E-67 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 vfu_A03059 a25c3fd0cd2ba99a984d0fe17e9a5058 284 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 68 283 30.452 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 vfu_B01425 1bb88221289e8354764572106abca465 533 Pfam PF01039 Carboxyl transferase domain 48 522 4.2E-145 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 vfu_B01425 1bb88221289e8354764572106abca465 533 SUPERFAMILY SSF52096 237 515 7.92E-83 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01425 1bb88221289e8354764572106abca465 533 SUPERFAMILY SSF52096 24 269 9.37E-71 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01425 1bb88221289e8354764572106abca465 533 Gene3D G3DSA:3.90.226.10 1 268 2.2E-95 T 12-10-2018 vfu_B01425 1bb88221289e8354764572106abca465 533 Gene3D G3DSA:3.90.226.10 273 533 1.8E-98 T 12-10-2018 vfu_A01177 42e32181a7e575f94116f33c004ff4d9 301 SUPERFAMILY SSF54909 1 296 1.79E-94 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A01177 42e32181a7e575f94116f33c004ff4d9 301 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 8.2E-88 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 vfu_A01177 42e32181a7e575f94116f33c004ff4d9 301 Pfam PF04261 Dyp-type peroxidase family 5 293 3.7E-92 T 12-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 Gene3D G3DSA:3.30.420.40 9 222 1.8E-28 T 12-10-2018 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 PRINTS PR00301 70kDa heat shock protein signature 231 241 1.4E-8 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 PRINTS PR00301 70kDa heat shock protein signature 164 184 1.4E-8 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 PRINTS PR00301 70kDa heat shock protein signature 415 435 1.4E-8 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 PRINTS PR00301 70kDa heat shock protein signature 13 26 1.4E-8 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 Pfam PF00012 Hsp70 protein 15 343 1.5E-16 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 Gene3D G3DSA:3.30.420.40 223 341 5.1E-5 T 12-10-2018 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 225 238 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 17 24 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 SUPERFAMILY SSF53067 12 206 1.47E-28 T 12-10-2018 vfu_A01988 693e0c698c8cc83ffaf28ae7a20bc639 635 SUPERFAMILY SSF53067 220 474 3.99E-26 T 12-10-2018 vfu_A00228 5d2935cbf4d4351119a244066e632712 255 Pfam PF09836 Putative DNA-binding domain 5 95 3.3E-22 T 12-10-2018 IPR018640 Putative DNA-binding domain, bacteria vfu_A02054 b204d9d2de822336d9499fbaf24515c0 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A02054 b204d9d2de822336d9499fbaf24515c0 181 Pfam PF13247 4Fe-4S dicluster domain 53 155 5.2E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A02054 b204d9d2de822336d9499fbaf24515c0 181 SUPERFAMILY SSF54862 1 165 1.26E-42 T 12-10-2018 vfu_A02054 b204d9d2de822336d9499fbaf24515c0 181 Gene3D G3DSA:3.30.70.20 6 167 4.9E-30 T 12-10-2018 vfu_A02054 b204d9d2de822336d9499fbaf24515c0 181 Gene3D G3DSA:3.30.70.20 64 131 4.9E-30 T 12-10-2018 vfu_B00699 f4b3a09b8416cc6c059e76a2144aacd9 239 PIRSF PIRSF029033 1 239 2.6E-110 T 12-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein vfu_B00699 f4b3a09b8416cc6c059e76a2144aacd9 239 Pfam PF04402 Protein of unknown function (DUF541) 41 213 1.2E-15 T 12-10-2018 IPR007497 Protein of unknown function DUF541 vfu_B00280 deff46fb7261ab5d91772a2dd24e5d1e 155 Gene3D G3DSA:3.20.20.70 2 154 1.4E-20 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_B00280 deff46fb7261ab5d91772a2dd24e5d1e 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.5E-52 T 12-10-2018 vfu_B00280 deff46fb7261ab5d91772a2dd24e5d1e 155 SUPERFAMILY SSF102114 24 118 1.96E-6 T 12-10-2018 vfu_B00280 deff46fb7261ab5d91772a2dd24e5d1e 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 2.2E-62 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 vfu_B00280 deff46fb7261ab5d91772a2dd24e5d1e 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 12-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 vfu_B00280 deff46fb7261ab5d91772a2dd24e5d1e 155 PIRSF PIRSF000368 1 155 1.6E-60 T 12-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 vfu_B01041 2a78d18abce8ce853185fd3da8f85e59 395 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 30 373 4.0E-145 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_B01041 2a78d18abce8ce853185fd3da8f85e59 395 SUPERFAMILY SSF56935 23 395 1.69E-114 T 12-10-2018 vfu_B01041 2a78d18abce8ce853185fd3da8f85e59 395 Gene3D G3DSA:2.40.170.10 23 395 2.2E-116 T 12-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 vfu_B01041 2a78d18abce8ce853185fd3da8f85e59 395 Pfam PF02264 LamB porin 25 395 2.0E-107 T 12-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 SUPERFAMILY SSF46785 4 117 1.25E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02801 77282fad71ed3476f82f08059a69364d 301 SUPERFAMILY SSF53850 95 300 2.64E-35 T 12-10-2018 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 Gene3D G3DSA:1.10.10.10 2 90 5.8E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02801 77282fad71ed3476f82f08059a69364d 301 Gene3D G3DSA:3.40.190.10 98 297 2.6E-54 T 12-10-2018 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 Gene3D G3DSA:3.40.190.10 168 269 2.6E-54 T 12-10-2018 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 Pfam PF03466 LysR substrate binding domain 94 299 7.9E-38 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02801 77282fad71ed3476f82f08059a69364d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.8E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02801 77282fad71ed3476f82f08059a69364d 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 Pfam PF00005 ABC transporter 330 483 9.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 563 0.0015 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 1.0E-6 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 Gene3D G3DSA:3.40.50.300 1 283 1.1E-86 T 12-10-2018 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 Gene3D G3DSA:3.40.50.300 301 571 2.9E-85 T 12-10-2018 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 SUPERFAMILY SSF52540 3 253 2.18E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 Pfam PF00005 ABC transporter 24 181 1.5E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 SUPERFAMILY SSF52540 318 553 2.11E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 SMART SM00382 338 534 1.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00247 1f5d93642999b9a009616f0434a04d24 571 SMART SM00382 32 231 7.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 320 34.922 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 Gene3D G3DSA:1.20.58.410 1 71 9.2E-23 T 12-10-2018 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 318 6.3E-157 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 Pfam PF00472 RF-1 domain 184 292 2.0E-40 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 Pfam PF03462 PCRF domain 1 174 4.2E-54 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 Gene3D G3DSA:3.30.160.20 181 276 1.0E-95 T 12-10-2018 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 SUPERFAMILY SSF75620 1 319 6.8E-133 T 12-10-2018 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 SMART SM00937 40 150 8.4E-55 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 200 216 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 vfu_A00961 d81cdfdae65d7a751fef130369e7b29b 320 Gene3D G3DSA:3.30.70.1660 85 313 1.0E-95 T 12-10-2018 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 SUPERFAMILY SSF55816 366 564 8.37E-42 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 PRINTS PR01607 Apyrase family signature 8 26 2.1E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 PRINTS PR01607 Apyrase family signature 511 530 2.1E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 PRINTS PR01607 Apyrase family signature 272 292 2.1E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 PRINTS PR01607 Apyrase family signature 232 255 2.1E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 PRINTS PR01607 Apyrase family signature 213 230 2.1E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 Gene3D G3DSA:3.60.21.10 2 366 5.6E-88 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 SUPERFAMILY SSF56300 5 328 1.21E-74 T 12-10-2018 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 Pfam PF00149 Calcineurin-like phosphoesterase 11 249 2.2E-8 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 Gene3D G3DSA:3.90.780.10 367 576 1.3E-35 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_B00241 d915ebdcd27448a606f4f685262f3a9c 577 Pfam PF02872 5'-nucleotidase, C-terminal domain 370 536 6.9E-25 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 Gene3D G3DSA:3.90.930.12 83 177 5.2E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 SUPERFAMILY SSF56053 1 82 1.96E-25 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.4E-33 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.296 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.2E-73 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 Pfam PF00347 Ribosomal protein L6 91 164 5.4E-18 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 Pfam PF00347 Ribosomal protein L6 11 82 7.6E-21 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 Gene3D G3DSA:3.90.930.12 1 82 4.1E-31 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 SUPERFAMILY SSF56053 83 177 2.22E-35 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00682 5e388c5e622ddca7885951b03c218963 177 PIRSF PIRSF002162 1 177 8.3E-44 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.7E-15 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.7E-15 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.7E-15 T 12-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 1.7E-19 T 12-10-2018 IPR006260 TonB/TolA, C-terminal vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 SUPERFAMILY SSF74653 118 196 6.41E-25 T 12-10-2018 vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 3.8E-21 T 12-10-2018 IPR037682 TonB, C-terminal GO:0055085 vfu_A01851 72c4458306a9c7a8196b73b7f5e4230d 206 Gene3D G3DSA:3.30.1150.10 103 206 2.2E-29 T 12-10-2018 vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 Pfam PF13187 4Fe-4S dicluster domain 10 53 1.8E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 Pfam PF00037 4Fe-4S binding domain 101 123 1.4E-5 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 SUPERFAMILY SSF54862 8 125 1.6E-16 T 12-10-2018 vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 Gene3D G3DSA:3.30.70.20 68 125 1.0E-8 T 12-10-2018 vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 Gene3D G3DSA:3.30.70.20 7 58 3.9E-10 T 12-10-2018 vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 41 52 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B00891 628a07c51ed3e4767cf46b8826f425a1 129 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:1.20.120.1320 44 137 1.8E-72 T 12-10-2018 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 PIRSF PIRSF000727 5 803 8.6E-286 T 12-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.40.50.720 451 797 4.6E-104 T 12-10-2018 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.40.1160.10 8 290 1.8E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A00581 47748628277d5fe42e859278fe6eea86 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Pfam PF00742 Homoserine dehydrogenase 601 796 3.6E-43 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.1E-64 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.30.70.260 365 380 1.7E-5 T 12-10-2018 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 SUPERFAMILY SSF55347 601 784 4.25E-46 T 12-10-2018 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.30.360.10 612 782 4.6E-104 T 12-10-2018 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 1.0E-14 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 SUPERFAMILY SSF53633 5 291 2.09E-56 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Pfam PF00696 Amino acid kinase family 5 274 2.7E-42 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 Gene3D G3DSA:3.30.70.260 381 443 1.7E-5 T 12-10-2018 vfu_A00581 47748628277d5fe42e859278fe6eea86 803 SUPERFAMILY SSF51735 448 623 8.95E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 Gene3D G3DSA:3.50.80.20 68 160 5.2E-10 T 12-10-2018 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 Gene3D G3DSA:3.40.710.10 223 456 6.2E-46 T 12-10-2018 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 43 62 3.3E-25 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 264 286 3.3E-25 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 323 337 3.3E-25 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 338 352 3.3E-25 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 402 415 3.3E-25 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 17 416 5.5E-97 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 37 423 6.6E-96 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 vfu_A00927 50d551733dd6c102c68e7b5b114ebf7b 464 SUPERFAMILY SSF56601 15 434 1.55E-79 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like vfu_A02980 175dea73c8153df277c952771a6783c6 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 158 4.8E-48 T 12-10-2018 IPR008136 CinA, C-terminal vfu_A02980 175dea73c8153df277c952771a6783c6 162 SUPERFAMILY SSF142433 5 159 1.22E-54 T 12-10-2018 IPR036653 CinA-like, C-terminal vfu_A02980 175dea73c8153df277c952771a6783c6 162 Pfam PF02464 Competence-damaged protein 5 158 5.0E-57 T 12-10-2018 IPR008136 CinA, C-terminal vfu_A02980 175dea73c8153df277c952771a6783c6 162 Gene3D G3DSA:3.90.950.20 1 160 4.4E-57 T 12-10-2018 IPR036653 CinA-like, C-terminal vfu_B00553 d1143408654d76ff563141715476cd2f 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 2.9E-38 T 12-10-2018 IPR021724 Protein of unknown function DUF3297 vfu_B00351 615d48796412abae70e62926a2898a4d 369 Gene3D G3DSA:2.40.50.100 292 360 6.2E-14 T 12-10-2018 vfu_B00351 615d48796412abae70e62926a2898a4d 369 SMART SM00382 25 207 1.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00351 615d48796412abae70e62926a2898a4d 369 SUPERFAMILY SSF52540 8 236 1.46E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00351 615d48796412abae70e62926a2898a4d 369 Pfam PF00005 ABC transporter 18 158 2.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00351 615d48796412abae70e62926a2898a4d 369 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 4 359 4.5E-144 T 12-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 vfu_B00351 615d48796412abae70e62926a2898a4d 369 SUPERFAMILY SSF50331 236 359 1.48E-16 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_B00351 615d48796412abae70e62926a2898a4d 369 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00351 615d48796412abae70e62926a2898a4d 369 Pfam PF03459 TOBE domain 293 359 2.1E-14 T 12-10-2018 IPR005116 Transport-associated OB, type 1 vfu_B00351 615d48796412abae70e62926a2898a4d 369 Gene3D G3DSA:3.40.50.300 5 237 9.4E-59 T 12-10-2018 vfu_A00832 cfa378d36a88e740141ddfa20086ebee 322 Pfam PF03888 MucB/RseB N-terminal domain 25 195 9.3E-59 T 12-10-2018 IPR033434 MucB/RseB, N-terminal vfu_A00832 cfa378d36a88e740141ddfa20086ebee 322 Gene3D G3DSA:2.50.20.10 24 209 2.9E-52 T 12-10-2018 vfu_A00832 cfa378d36a88e740141ddfa20086ebee 322 Pfam PF17188 MucB/RseB C-terminal domain 219 312 2.9E-26 T 12-10-2018 IPR033436 MucB/RseB, C-terminal vfu_A00832 cfa378d36a88e740141ddfa20086ebee 322 PIRSF PIRSF005427 1 319 4.2E-81 T 12-10-2018 IPR005588 MucB/RseB vfu_A00832 cfa378d36a88e740141ddfa20086ebee 322 Gene3D G3DSA:3.30.200.100 218 317 6.2E-27 T 12-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily vfu_B00870 77d015903173be10819d782778197f14 662 Pfam PF05013 N-formylglutamate amidohydrolase 42 224 2.3E-11 T 12-10-2018 IPR007709 N-formylglutamate amidohydrolase vfu_B00870 77d015903173be10819d782778197f14 662 Pfam PF08014 Domain of unknown function (DUF1704) 323 654 8.2E-106 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 vfu_B00870 77d015903173be10819d782778197f14 662 SUPERFAMILY SSF53187 35 222 5.02E-7 T 12-10-2018 vfu_B00870 77d015903173be10819d782778197f14 662 SMART SM01154 322 661 2.4E-145 T 12-10-2018 IPR012548 Protein of unknown function DUF1704 vfu_B00870 77d015903173be10819d782778197f14 662 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 297 654 3.1E-131 T 12-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA vfu_A00825 7b6cd0dad841be662e11b2c2118e0a52 158 Pfam PF04073 Aminoacyl-tRNA editing domain 28 146 7.5E-26 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 vfu_A00825 7b6cd0dad841be662e11b2c2118e0a52 158 Gene3D G3DSA:3.90.960.10 2 158 3.9E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A00825 7b6cd0dad841be662e11b2c2118e0a52 158 SUPERFAMILY SSF55826 6 155 9.94E-36 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A00392 65645ec9531456ca7d381e619b04cd9a 175 Gene3D G3DSA:1.20.1260.10 1 175 6.6E-53 T 12-10-2018 IPR012347 Ferritin-like vfu_A00392 65645ec9531456ca7d381e619b04cd9a 175 SUPERFAMILY SSF47240 1 159 6.3E-58 T 12-10-2018 IPR009078 Ferritin-like superfamily vfu_A00392 65645ec9531456ca7d381e619b04cd9a 175 Pfam PF00210 Ferritin-like domain 8 143 2.9E-39 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 vfu_A02017 7b623d92f418bf0b973a933a053bda60 201 SUPERFAMILY SSF52833 47 171 1.15E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02017 7b623d92f418bf0b973a933a053bda60 201 Gene3D G3DSA:3.40.30.10 43 182 1.5E-14 T 12-10-2018 vfu_A02017 7b623d92f418bf0b973a933a053bda60 201 Pfam PF00578 AhpC/TSA family 58 164 1.7E-5 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 vfu_A01521 5add8199c69f2153b4590af5b7559a35 576 Gene3D G3DSA:3.90.550.10 13 221 1.5E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01521 5add8199c69f2153b4590af5b7559a35 576 Pfam PF00535 Glycosyl transferase family 2 14 134 3.6E-21 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 vfu_A01521 5add8199c69f2153b4590af5b7559a35 576 SUPERFAMILY SSF53448 14 242 1.93E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A01521 5add8199c69f2153b4590af5b7559a35 576 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 348 515 1.0E-10 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 vfu_B00016 b10d58cb346bda808d36f9250cb6f6da 205 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 197 23.314 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 vfu_B00016 b10d58cb346bda808d36f9250cb6f6da 205 SUPERFAMILY SSF52218 1 198 6.52E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B00016 b10d58cb346bda808d36f9250cb6f6da 205 Pfam PF02525 Flavodoxin-like fold 1 194 1.3E-35 T 12-10-2018 IPR003680 Flavodoxin-like fold vfu_B00016 b10d58cb346bda808d36f9250cb6f6da 205 Gene3D G3DSA:3.40.50.360 1 196 6.0E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B00780 6a7f6f9fc624a15d179bca555dcb103b 1136 Pfam PF14331 ImcF-related N-terminal domain 164 416 3.4E-52 T 12-10-2018 IPR025743 ImcF-related, N-terminal domain vfu_B00780 6a7f6f9fc624a15d179bca555dcb103b 1136 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 21 1133 1.9E-124 T 12-10-2018 IPR017731 Type VI secretion system, IcmF vfu_B00780 6a7f6f9fc624a15d179bca555dcb103b 1136 Pfam PF06744 Type VI secretion protein IcmF C-terminal 887 1083 4.6E-46 T 12-10-2018 IPR010623 Type VI secretion system IcmF, C-terminal vfu_B00780 6a7f6f9fc624a15d179bca555dcb103b 1136 Pfam PF06761 Intracellular multiplication and human macrophage-killing 472 764 2.2E-41 T 12-10-2018 IPR009612 ImcF-related vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 Gene3D G3DSA:3.20.20.450 327 585 1.6E-76 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 Pfam PF00563 EAL domain 340 570 4.2E-60 T 12-10-2018 IPR001633 EAL domain vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 Gene3D G3DSA:3.30.70.270 153 326 9.0E-40 T 12-10-2018 vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 SUPERFAMILY SSF55781 5 149 6.54E-10 T 12-10-2018 vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 SMART SM00267 148 313 1.3E-31 T 12-10-2018 IPR000160 GGDEF domain vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 307 1.2E-30 T 12-10-2018 IPR000160 GGDEF domain vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 SMART SM00052 329 575 1.0E-76 T 12-10-2018 IPR001633 EAL domain vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 159 311 1.5E-28 T 12-10-2018 IPR000160 GGDEF domain vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 SUPERFAMILY SSF55073 164 314 9.42E-35 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01081 6d77a436b50397a3a6ad5b248df6cfc5 589 SUPERFAMILY SSF141868 340 580 3.53E-73 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.4E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.1E-46 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.0012 T 12-10-2018 vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 SUPERFAMILY SSF51735 2 245 5.75E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 Gene3D G3DSA:3.40.50.720 1 245 2.8E-76 T 12-10-2018 vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 1.8E-118 T 12-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B00321 2117a0dd6bae4be932994f882a64c614 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 2.3E-58 T 12-10-2018 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 SUPERFAMILY SSF63411 4 162 2.01E-64 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 7.0E-77 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 PIRSF PIRSF006160 1 162 6.1E-65 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.505 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 5.0E-60 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.6E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.6E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-50 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02965 9821ba392bceae082e0ae0862ef7064a 172 Gene3D G3DSA:3.30.1360.80 1 172 6.9E-71 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 Pfam PF00561 alpha/beta hydrolase fold 26 260 2.9E-25 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 Gene3D G3DSA:3.40.50.1820 8 276 4.7E-83 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 1.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 1.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.9E-11 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 SUPERFAMILY SSF53474 6 276 3.81E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00412 Epoxide hydrolase signature 252 274 1.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00412 Epoxide hydrolase signature 218 234 1.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A01772 e7d7d61aae35bfcdc328c16d0967dbd6 277 PRINTS PR00412 Epoxide hydrolase signature 51 66 1.7E-8 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_B00763 b35e0be17c160974e9bdb5234191a528 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 315 3.5E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_B00763 b35e0be17c160974e9bdb5234191a528 319 Gene3D G3DSA:3.30.70.270 146 317 4.7E-50 T 12-10-2018 vfu_B00763 b35e0be17c160974e9bdb5234191a528 319 SUPERFAMILY SSF55073 165 317 7.85E-43 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00763 b35e0be17c160974e9bdb5234191a528 319 SMART SM00267 149 319 1.5E-51 T 12-10-2018 IPR000160 GGDEF domain vfu_B00763 b35e0be17c160974e9bdb5234191a528 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 316 2.7E-41 T 12-10-2018 IPR000160 GGDEF domain vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 SMART SM00342 34 116 1.7E-23 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 Pfam PF12833 Helix-turn-helix domain 40 117 1.1E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 SUPERFAMILY SSF46689 71 120 2.46E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 85 100 3.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 100 116 3.1E-5 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 Gene3D G3DSA:1.10.10.60 15 119 8.5E-22 T 12-10-2018 vfu_B00746 1b7a6aca6019dcedbf54067e7a1ee31c 149 SUPERFAMILY SSF46689 17 68 1.67E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 SMART SM01004 9 333 6.5E-243 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PIRSF PIRSF001415 2 336 1.5E-150 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 SUPERFAMILY SSF51569 7 335 1.32E-143 T 12-10-2018 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.4E-57 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 Gene3D G3DSA:3.20.20.70 2 337 5.3E-147 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.4E-140 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A00421 b926a08dc18857de0bda9b8f746aacb5 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 vfu_A01174 3fb03f9b03f78229c3951eb596011d24 543 Gene3D G3DSA:1.20.1730.10 32 543 2.2E-208 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_A01174 3fb03f9b03f78229c3951eb596011d24 543 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 159 184 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site vfu_A01174 3fb03f9b03f78229c3951eb596011d24 543 Pfam PF00474 Sodium:solute symporter family 44 461 1.6E-72 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A01174 3fb03f9b03f78229c3951eb596011d24 543 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 44 462 1.2E-126 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A02175 18187b699e1731858e6d1d3b46c8cd62 266 Pfam PF07722 Peptidase C26 10 225 7.6E-68 T 12-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 vfu_A02175 18187b699e1731858e6d1d3b46c8cd62 266 SUPERFAMILY SSF52317 7 248 3.39E-40 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02175 18187b699e1731858e6d1d3b46c8cd62 266 Gene3D G3DSA:3.40.50.880 7 252 9.1E-67 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A00355 897aefda232597a3098bb2e360053ee2 400 Pfam PF07690 Major Facilitator Superfamily 13 344 4.1E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A00355 897aefda232597a3098bb2e360053ee2 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 369 1.4E-83 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 vfu_A00355 897aefda232597a3098bb2e360053ee2 400 Gene3D G3DSA:1.20.1720.10 8 379 3.7E-74 T 12-10-2018 vfu_A00355 897aefda232597a3098bb2e360053ee2 400 SUPERFAMILY SSF103473 5 382 1.23E-53 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 SMART SM00448 1 90 4.4E-7 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 Gene3D G3DSA:3.40.50.2300 1 95 2.0E-21 T 12-10-2018 vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 SMART SM00862 125 196 4.7E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 SUPERFAMILY SSF52172 1 152 2.28E-23 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 SUPERFAMILY SSF46894 100 196 5.39E-30 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 Gene3D G3DSA:1.10.10.10 96 198 2.2E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 Pfam PF00072 Response regulator receiver domain 2 90 1.4E-13 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00205 4f1c910a7fd7476cf1d0dcc56310bb5c 198 Pfam PF00486 Transcriptional regulatory protein, C terminal 125 196 4.5E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 Gene3D G3DSA:3.10.150.10 248 366 2.7E-39 T 12-10-2018 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 PIRSF PIRSF000804 1 366 7.7E-117 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 SMART SM00480 17 362 1.8E-143 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 Gene3D G3DSA:3.10.150.10 124 247 1.3E-34 T 12-10-2018 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 4.6E-34 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 Gene3D G3DSA:3.10.150.10 1 122 1.0E-41 T 12-10-2018 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 SUPERFAMILY SSF55979 245 366 6.28E-37 T 12-10-2018 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 SUPERFAMILY SSF55979 1 118 4.4E-28 T 12-10-2018 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.0E-39 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 SUPERFAMILY SSF55979 126 244 2.07E-28 T 12-10-2018 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.4E-37 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 vfu_A00312 50c35cd009f8d56591c90cedbe0368b8 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 7.7E-107 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 vfu_A00475 ebf0680fcd8b68ffa57497232af36a04 284 Gene3D G3DSA:1.10.357.140 19 180 1.8E-43 T 12-10-2018 vfu_A00475 ebf0680fcd8b68ffa57497232af36a04 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 30.028 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 vfu_A00475 ebf0680fcd8b68ffa57497232af36a04 284 Pfam PF01040 UbiA prenyltransferase family 24 266 1.2E-64 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 vfu_A00475 ebf0680fcd8b68ffa57497232af36a04 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 1.2E-107 T 12-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 vfu_A00463 bf84eb9cbf0210768f213e8d746721bc 78 Pfam PF10678 Protein of unknown function (DUF2492) 4 77 3.3E-26 T 12-10-2018 IPR019620 Putative metal-binding protein vfu_A00463 bf84eb9cbf0210768f213e8d746721bc 78 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 78 1.3E-27 T 12-10-2018 IPR019620 Putative metal-binding protein vfu_B00984 f8d306e4b3c12f6568c74303ff9c8704 119 SMART SM00448 2 115 4.1E-39 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00984 f8d306e4b3c12f6568c74303ff9c8704 119 Gene3D G3DSA:3.40.50.12740 2 119 4.7E-39 T 12-10-2018 vfu_B00984 f8d306e4b3c12f6568c74303ff9c8704 119 SUPERFAMILY SSF52172 1 119 6.26E-39 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00984 f8d306e4b3c12f6568c74303ff9c8704 119 Pfam PF00072 Response regulator receiver domain 4 115 4.5E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00376 aabe5f6b92e9f3986f9686df9351ffb4 78 Pfam PF04606 Ogr/Delta-like zinc finger 4 50 2.8E-14 T 12-10-2018 IPR007684 Zinc finger, Ogr/Delta-type vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 86 173 3.5E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 Gene3D G3DSA:3.40.50.2300 74 184 4.2E-41 T 12-10-2018 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 85 168 3.1E-37 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 193 528 2.6E-142 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 SUPERFAMILY SSF52794 83 183 1.66E-36 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 SUPERFAMILY SSF52794 5 60 2.88E-11 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 Pfam PF02378 Phosphotransferase system, EIIC 209 472 1.1E-14 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 vfu_B00277 531306c23cd21b226a6e20014c88ba7b 539 Gene3D G3DSA:3.40.50.2300 3 62 2.0E-8 T 12-10-2018 vfu_A02853 ab83b52507bde38b5a9242f22c492fa8 318 Pfam PF00482 Type II secretion system (T2SS), protein F 177 305 6.3E-23 T 12-10-2018 IPR018076 Type II secretion system F domain vfu_A02853 ab83b52507bde38b5a9242f22c492fa8 318 Gene3D G3DSA:1.20.81.30 173 282 1.4E-6 T 12-10-2018 vfu_B00482 65c5f69b2874ef8eee5509e700a9b176 141 Gene3D G3DSA:3.10.180.10 2 139 1.7E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00482 65c5f69b2874ef8eee5509e700a9b176 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 3.9E-8 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_B00482 65c5f69b2874ef8eee5509e700a9b176 141 SUPERFAMILY SSF54593 6 131 7.98E-24 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01993 0c271772dd910c583ae2745e79f61b76 328 Gene3D G3DSA:3.40.190.10 21 119 2.3E-9 T 12-10-2018 vfu_A01993 0c271772dd910c583ae2745e79f61b76 328 SUPERFAMILY SSF53850 31 253 9.37E-33 T 12-10-2018 vfu_A01993 0c271772dd910c583ae2745e79f61b76 328 Gene3D G3DSA:3.40.190.10 201 324 1.6E-8 T 12-10-2018 vfu_A01993 0c271772dd910c583ae2745e79f61b76 328 Gene3D G3DSA:3.40.190.10 120 200 1.2E-14 T 12-10-2018 vfu_A01993 0c271772dd910c583ae2745e79f61b76 328 Pfam PF09084 NMT1/THI5 like 43 252 2.1E-18 T 12-10-2018 IPR015168 SsuA/THI5-like vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 Gene3D G3DSA:1.10.10.60 237 284 2.1E-15 T 12-10-2018 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 Pfam PF02311 AraC-like ligand binding domain 28 160 6.0E-28 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 SUPERFAMILY SSF46689 237 283 6.72E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 Gene3D G3DSA:1.10.10.60 180 236 4.9E-13 T 12-10-2018 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 Pfam PF12833 Helix-turn-helix domain 206 283 2.3E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 SUPERFAMILY SSF46689 184 234 1.93E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 SUPERFAMILY SSF51215 41 165 1.7E-17 T 12-10-2018 IPR037923 Transcription regulator HTH-like vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 SMART SM00342 200 282 6.5E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01095 cda0a2795bece28b48b56820d935c5d6 284 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 278 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A01089 3e492d52bcc87265bd90ac0211e97b75 287 SUPERFAMILY SSF56219 59 278 8.9E-27 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_A01089 3e492d52bcc87265bd90ac0211e97b75 287 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 67 271 3.0E-8 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase vfu_A01089 3e492d52bcc87265bd90ac0211e97b75 287 Gene3D G3DSA:3.60.10.10 60 282 1.2E-22 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_A01089 3e492d52bcc87265bd90ac0211e97b75 287 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 279 52.22 T 12-10-2018 IPR022958 Uncharacterised protein family UPF0294 vfu_A02067 9198adb3cf23996e2e8976779613e9b4 227 SUPERFAMILY SSF52172 3 131 4.84E-32 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02067 9198adb3cf23996e2e8976779613e9b4 227 SMART SM00448 3 116 1.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02067 9198adb3cf23996e2e8976779613e9b4 227 Pfam PF12431 Transcriptional regulator 132 160 4.0E-7 T 12-10-2018 IPR028141 Transcriptional regulator vfu_A02067 9198adb3cf23996e2e8976779613e9b4 227 PIRSF PIRSF006171 1 227 3.5E-81 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 vfu_A02067 9198adb3cf23996e2e8976779613e9b4 227 Pfam PF00072 Response regulator receiver domain 5 116 9.5E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02067 9198adb3cf23996e2e8976779613e9b4 227 Gene3D G3DSA:3.40.50.2300 2 133 5.9E-28 T 12-10-2018 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 PIRSF PIRSF006076 1 802 7.0E-245 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:3.10.20.310 92 174 3.3E-17 T 12-10-2018 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:3.10.20.310 175 263 7.6E-24 T 12-10-2018 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:3.10.20.310 264 346 1.4E-12 T 12-10-2018 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 176 263 2.9E-16 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 348 420 3.4E-15 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 266 344 1.6E-9 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF07244 Surface antigen variable number repeat 92 172 9.8E-12 T 12-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 802 25.797 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:2.40.160.50 425 802 4.3E-122 T 12-10-2018 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 802 2.4E-280 T 12-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:3.10.20.310 347 424 1.3E-24 T 12-10-2018 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Pfam PF01103 Surface antigen 448 802 5.5E-89 T 12-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 vfu_A01077 265441a36701aec8ae0645e1a4ec4156 802 Gene3D G3DSA:3.10.20.310 17 91 2.0E-19 T 12-10-2018 vfu_A01039 d648dc5a70febd954355a0ef04b5c34c 505 SMART SM00267 328 502 8.3E-45 T 12-10-2018 IPR000160 GGDEF domain vfu_A01039 d648dc5a70febd954355a0ef04b5c34c 505 Pfam PF05228 CHASE4 domain 58 211 6.3E-23 T 12-10-2018 IPR007892 CHASE4 vfu_A01039 d648dc5a70febd954355a0ef04b5c34c 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 502 4.2E-36 T 12-10-2018 IPR000160 GGDEF domain vfu_A01039 d648dc5a70febd954355a0ef04b5c34c 505 Gene3D G3DSA:3.30.70.270 325 501 7.2E-43 T 12-10-2018 vfu_A01039 d648dc5a70febd954355a0ef04b5c34c 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 497 2.0E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_A01039 d648dc5a70febd954355a0ef04b5c34c 505 SUPERFAMILY SSF55073 344 501 1.02E-32 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00886 166229504eb14045ad5c0c380dce8d85 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 vfu_A00886 166229504eb14045ad5c0c380dce8d85 222 Gene3D G3DSA:3.40.1050.10 1 222 1.5E-90 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 vfu_A00886 166229504eb14045ad5c0c380dce8d85 222 Pfam PF00484 Carbonic anhydrase 38 188 5.5E-49 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 vfu_A00886 166229504eb14045ad5c0c380dce8d85 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 12-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 vfu_A00886 166229504eb14045ad5c0c380dce8d85 222 SMART SM00947 30 192 2.6E-66 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 vfu_A00886 166229504eb14045ad5c0c380dce8d85 222 SUPERFAMILY SSF53056 2 214 8.5E-75 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 vfu_A00675 7b64f1e262aa7d90a79cfc633121c0a7 36 SUPERFAMILY SSF46561 1 34 3.4E-12 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00675 7b64f1e262aa7d90a79cfc633121c0a7 36 TIGRFAM TIGR00012 L29: ribosomal protein uL29 1 33 2.1E-14 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00675 7b64f1e262aa7d90a79cfc633121c0a7 36 Gene3D G3DSA:1.10.287.310 1 36 6.4E-17 T 12-10-2018 vfu_A00675 7b64f1e262aa7d90a79cfc633121c0a7 36 ProSitePatterns PS00579 Ribosomal protein L29 signature. 12 26 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00675 7b64f1e262aa7d90a79cfc633121c0a7 36 Pfam PF00831 Ribosomal L29 protein 1 33 1.5E-14 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00474 386f3e89c4cfc72a7603fd4f8bf561e9 179 Gene3D G3DSA:3.40.1410.10 8 174 1.1E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_A00474 386f3e89c4cfc72a7603fd4f8bf561e9 179 Pfam PF04345 Chorismate lyase 12 179 1.8E-55 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 vfu_A00474 386f3e89c4cfc72a7603fd4f8bf561e9 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.196 T 12-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 vfu_A00474 386f3e89c4cfc72a7603fd4f8bf561e9 179 SUPERFAMILY SSF64288 8 174 7.42E-44 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily vfu_B01073 619a0b1f48d039b168f44018b8068a16 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B01073 619a0b1f48d039b168f44018b8068a16 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 3.6E-126 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 vfu_B01073 619a0b1f48d039b168f44018b8068a16 249 Pfam PF00005 ABC transporter 19 174 4.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01073 619a0b1f48d039b168f44018b8068a16 249 Gene3D G3DSA:3.40.50.300 4 246 3.6E-63 T 12-10-2018 vfu_B01073 619a0b1f48d039b168f44018b8068a16 249 SUPERFAMILY SSF52540 5 236 1.97E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01073 619a0b1f48d039b168f44018b8068a16 249 SMART SM00382 28 220 4.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 ProSitePatterns PS00194 Thioredoxin family active site. 130 148 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 Gene3D G3DSA:3.10.450.70 30 93 1.9E-17 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 Pfam PF13098 Thioredoxin-like domain 123 251 1.0E-25 T 12-10-2018 IPR012336 Thioredoxin-like fold vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 SUPERFAMILY SSF54423 39 92 3.01E-13 T 12-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 SUPERFAMILY SSF52833 111 253 8.59E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 Gene3D G3DSA:3.40.30.10 94 253 1.5E-46 T 12-10-2018 vfu_A00877 c7f90e5500358bf6c697c16bf0011add 254 Pfam PF10411 Disulfide bond isomerase protein N-terminus 42 91 8.6E-14 T 12-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal vfu_A02781 bd9747b30d146df5ca3ef12a859efc08 64 Gene3D G3DSA:1.10.10.600 1 64 1.2E-29 T 12-10-2018 IPR036762 IscX-like superfamily vfu_A02781 bd9747b30d146df5ca3ef12a859efc08 64 PIRSF PIRSF039003 1 64 1.3E-34 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 vfu_A02781 bd9747b30d146df5ca3ef12a859efc08 64 SUPERFAMILY SSF140319 1 62 4.18E-28 T 12-10-2018 IPR036762 IscX-like superfamily vfu_A02781 bd9747b30d146df5ca3ef12a859efc08 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 1.8E-33 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 vfu_A02781 bd9747b30d146df5ca3ef12a859efc08 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 7.8E-35 T 12-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 vfu_B00391 756dc0c6f8def3e4c3c2746c04647551 205 Pfam PF04383 KilA-N domain 11 104 2.2E-21 T 12-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding vfu_B00391 756dc0c6f8def3e4c3c2746c04647551 205 SMART SM01252 6 104 1.0E-29 T 12-10-2018 IPR018004 KilA, N-terminal/APSES-type HTH, DNA-binding vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 7.0E-36 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 SUPERFAMILY SSF161070 3 472 9.81E-149 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 Pfam PF00209 Sodium:neurotransmitter symporter family 123 472 1.2E-77 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01321 c3a00e8ebace5878b43e81f4c6144e80 486 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.9E-39 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01332 95e07d7f040abd9ad98e9a42b1c63cb8 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 1.0E-43 T 12-10-2018 IPR021376 Protein of unknown function DUF2999 vfu_B00062 08c75828afca8fd4388eb5dac19e7f52 156 Pfam PF00583 Acetyltransferase (GNAT) family 41 130 3.2E-7 T 12-10-2018 IPR000182 GNAT domain vfu_B00062 08c75828afca8fd4388eb5dac19e7f52 156 Gene3D G3DSA:3.40.630.30 1 156 6.8E-18 T 12-10-2018 vfu_B00062 08c75828afca8fd4388eb5dac19e7f52 156 SUPERFAMILY SSF55729 1 151 1.1E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00480 995b8462969be709a359e55be3eeb967 270 SUPERFAMILY SSF53335 19 252 6.89E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00480 995b8462969be709a359e55be3eeb967 270 Gene3D G3DSA:3.40.50.150 14 250 3.3E-21 T 12-10-2018 vfu_A00480 995b8462969be709a359e55be3eeb967 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 128 3.9E-6 T 12-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 vfu_A00480 995b8462969be709a359e55be3eeb967 270 PIRSF PIRSF028177 3 270 4.3E-75 T 12-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 Gene3D G3DSA:2.40.420.20 34 349 7.7E-72 T 12-10-2018 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 SUPERFAMILY SSF111369 48 266 9.55E-30 T 12-10-2018 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 Pfam PF13437 HlyD family secretion protein 153 251 3.2E-9 T 12-10-2018 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 351 1.8E-67 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 Gene3D G3DSA:2.40.30.170 41 267 7.7E-72 T 12-10-2018 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 Pfam PF13533 Biotin-lipoyl like 59 101 1.5E-13 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 Gene3D G3DSA:2.40.50.100 55 187 7.7E-72 T 12-10-2018 vfu_A01665 234dc18c00ac63dfad15a7f81570ac66 358 Gene3D G3DSA:1.10.287.470 89 148 7.7E-72 T 12-10-2018 vfu_A00765 9d1dcb31fc5e598a87cb55bb921026a3 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 451 1.1E-45 T 12-10-2018 IPR000160 GGDEF domain vfu_A00765 9d1dcb31fc5e598a87cb55bb921026a3 457 SUPERFAMILY SSF55073 301 451 1.49E-44 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A00765 9d1dcb31fc5e598a87cb55bb921026a3 457 SMART SM00267 285 453 2.9E-56 T 12-10-2018 IPR000160 GGDEF domain vfu_A00765 9d1dcb31fc5e598a87cb55bb921026a3 457 Gene3D G3DSA:3.30.70.270 284 453 4.8E-50 T 12-10-2018 vfu_A00765 9d1dcb31fc5e598a87cb55bb921026a3 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 448 2.5E-42 T 12-10-2018 IPR000160 GGDEF domain vfu_B00693 75ecb74b363e58d39213672283ee505c 318 PIRSF PIRSF002849 1 318 4.0E-130 T 12-10-2018 vfu_B00693 75ecb74b363e58d39213672283ee505c 318 Gene3D G3DSA:3.40.50.300 17 183 1.4E-46 T 12-10-2018 vfu_B00693 75ecb74b363e58d39213672283ee505c 318 Gene3D G3DSA:1.10.8.300 199 315 2.2E-38 T 12-10-2018 vfu_B00693 75ecb74b363e58d39213672283ee505c 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 3.5E-63 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 vfu_B00693 75ecb74b363e58d39213672283ee505c 318 SUPERFAMILY SSF52540 5 290 7.75E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00199 a2c1958ad46ca23edcff4b11416ebe32 124 Pfam PF10719 Late competence development protein ComFB 8 84 3.0E-13 T 12-10-2018 IPR019657 Late competence development protein ComFB vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 SUPERFAMILY SSF47413 1 37 5.72E-6 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 SMART SM00354 1 51 2.0E-7 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 SUPERFAMILY SSF53822 40 279 9.23E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 Gene3D G3DSA:3.40.50.2300 140 256 4.9E-62 T 12-10-2018 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 Pfam PF13377 Periplasmic binding protein-like domain 147 278 1.1E-17 T 12-10-2018 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 Gene3D G3DSA:3.40.50.2300 45 278 4.9E-62 T 12-10-2018 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 1 280 2.4E-122 T 12-10-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 28 2.6E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A02672 f0bef0a3f286f88e2c249104810ed63c 294 Gene3D G3DSA:1.10.260.40 1 39 5.6E-9 T 12-10-2018 vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 3.2E-114 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 Gene3D G3DSA:3.10.580.10 197 321 4.5E-44 T 12-10-2018 vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 Gene3D G3DSA:3.40.50.10490 6 196 8.0E-65 T 12-10-2018 vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 Pfam PF00571 CBS domain 203 259 1.6E-6 T 12-10-2018 IPR000644 CBS domain vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 Pfam PF00571 CBS domain 269 321 4.5E-7 T 12-10-2018 IPR000644 CBS domain vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 Pfam PF01380 SIS domain 44 173 1.0E-31 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 SMART SM00116 276 323 0.027 T 12-10-2018 IPR000644 CBS domain vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 SMART SM00116 211 259 0.0018 T 12-10-2018 IPR000644 CBS domain vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 SUPERFAMILY SSF53697 10 319 6.67E-68 T 12-10-2018 vfu_A00738 63a1d1f22fa9d24a864ae423e3ad8a55 324 PIRSF PIRSF004692 1 324 3.7E-130 T 12-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 vfu_A01846 0b40ef2fd35db3ea5c2a932b10f9e770 261 Pfam PF00753 Metallo-beta-lactamase superfamily 9 209 1.1E-21 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A01846 0b40ef2fd35db3ea5c2a932b10f9e770 261 SUPERFAMILY SSF56281 7 227 1.83E-38 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A01846 0b40ef2fd35db3ea5c2a932b10f9e770 261 Gene3D G3DSA:3.60.15.10 2 241 2.2E-33 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A01846 0b40ef2fd35db3ea5c2a932b10f9e770 261 SMART SM00849 10 209 6.0E-22 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 SUPERFAMILY SSF81338 9 256 6.93E-73 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 5.8E-68 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 Gene3D G3DSA:1.20.1080.10 3 260 1.1E-96 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 Pfam PF00230 Major intrinsic protein 5 252 1.9E-63 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.3E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.3E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 1.3E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.3E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.3E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00411 8a1f1d2aa0df23ff46d92f40e043e21d 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.3E-50 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 vfu_B00588 d6ba886e0b6875ed65e9e1f50c517002 382 PIRSF PIRSF006078 1 377 2.8E-131 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 vfu_B00588 d6ba886e0b6875ed65e9e1f50c517002 382 Pfam PF02595 Glycerate kinase family 3 373 1.5E-143 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 vfu_B00588 d6ba886e0b6875ed65e9e1f50c517002 382 Gene3D G3DSA:3.90.1510.10 42 276 2.7E-135 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 vfu_B00588 d6ba886e0b6875ed65e9e1f50c517002 382 SUPERFAMILY SSF110738 1 375 1.29E-136 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 vfu_B00588 d6ba886e0b6875ed65e9e1f50c517002 382 Gene3D G3DSA:3.40.50.10350 1 362 2.7E-135 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold vfu_B00588 d6ba886e0b6875ed65e9e1f50c517002 382 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 3.0E-153 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 vfu_B00681 f42c249d21970ad9784fd7bbd6f7db04 369 SMART SM00267 184 344 3.2E-45 T 12-10-2018 IPR000160 GGDEF domain vfu_B00681 f42c249d21970ad9784fd7bbd6f7db04 369 SUPERFAMILY SSF55073 200 342 1.57E-37 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00681 f42c249d21970ad9784fd7bbd6f7db04 369 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 340 6.9E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_B00681 f42c249d21970ad9784fd7bbd6f7db04 369 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 191 342 5.1E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_B00681 f42c249d21970ad9784fd7bbd6f7db04 369 Gene3D G3DSA:3.30.70.270 180 344 4.8E-47 T 12-10-2018 vfu_A02867 641c258d53da3b44cf599c0b0cb6d567 561 Pfam PF00501 AMP-binding enzyme 23 440 2.4E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_A02867 641c258d53da3b44cf599c0b0cb6d567 561 SUPERFAMILY SSF56801 18 547 6.15E-112 T 12-10-2018 vfu_A02867 641c258d53da3b44cf599c0b0cb6d567 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A02867 641c258d53da3b44cf599c0b0cb6d567 561 Gene3D G3DSA:3.40.50.12780 15 433 2.8E-83 T 12-10-2018 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 Gene3D G3DSA:1.10.287.70 22 236 7.5E-59 T 12-10-2018 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 Pfam PF00520 Ion transport protein 23 235 8.9E-31 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 120 146 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 149 172 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 178 200 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 84 104 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 16 44 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 207 233 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 PRINTS PR00169 Potassium channel signature 58 81 3.2E-39 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A01294 ecc5a9b547886c4fa57662d02d86efca 291 SUPERFAMILY SSF81324 22 235 3.14E-52 T 12-10-2018 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 SUPERFAMILY SSF55347 127 236 1.26E-37 T 12-10-2018 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 PIRSF PIRSF000161 1 268 2.3E-89 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 SUPERFAMILY SSF51735 1 268 5.11E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.5 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 Gene3D G3DSA:3.40.50.720 3 264 2.6E-101 T 12-10-2018 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 1.7E-98 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 Gene3D G3DSA:3.30.360.10 127 234 2.6E-101 T 12-10-2018 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.2E-43 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A02923 7b4b52036dfcffe6a53dcb328e36cfc7 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 5.6E-40 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A01650 e29ee53458201d700822a69ca5f04892 579 Pfam PF02065 Melibiase 169 353 1.0E-15 T 12-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 vfu_A01650 e29ee53458201d700822a69ca5f04892 579 Gene3D G3DSA:3.20.20.70 188 495 1.1E-89 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01650 e29ee53458201d700822a69ca5f04892 579 SUPERFAMILY SSF51445 195 509 3.61E-73 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A01373 90e346a5766ab1b50af4019aed1b2adb 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 311 6.0E-65 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_A01373 90e346a5766ab1b50af4019aed1b2adb 329 PIRSF PIRSF006470 1 329 2.0E-66 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_A01373 90e346a5766ab1b50af4019aed1b2adb 329 SUPERFAMILY SSF53850 143 264 1.88E-5 T 12-10-2018 vfu_A01373 90e346a5766ab1b50af4019aed1b2adb 329 Gene3D G3DSA:3.40.190.170 32 329 2.7E-80 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_A01373 90e346a5766ab1b50af4019aed1b2adb 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 276 4.6E-56 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.947 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 SUPERFAMILY SSF53720 3 449 2.09E-125 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 2.6E-226 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 Gene3D G3DSA:3.40.605.10 7 448 1.0E-142 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 Gene3D G3DSA:3.40.309.10 247 436 1.0E-142 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_A00646 e6c5f5861df991c228a7f1858ebad71e 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 7.8E-123 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A02126 d34128abdbf9d7cec668ee44398cd608 174 Pfam PF13505 Outer membrane protein beta-barrel domain 12 174 8.9E-10 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel vfu_A02126 d34128abdbf9d7cec668ee44398cd608 174 SUPERFAMILY SSF56925 25 174 9.42E-13 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A02126 d34128abdbf9d7cec668ee44398cd608 174 Gene3D G3DSA:2.40.160.20 24 174 6.7E-12 T 12-10-2018 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 SMART SM01274 78 258 1.7E-105 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.302 T 12-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 Gene3D G3DSA:3.40.50.720 266 562 2.7E-111 T 12-10-2018 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 Gene3D G3DSA:3.40.50.10380 13 265 1.7E-114 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 3.2E-105 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 SMART SM00919 268 528 6.7E-134 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 1.4E-77 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 SUPERFAMILY SSF51735 268 559 1.31E-95 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PIRSF PIRSF000106 2 560 1.3E-226 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 144 173 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 180 202 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 264 280 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 84 108 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 295 311 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 405 421 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 PRINTS PR00072 Malic enzyme signature 239 257 2.1E-72 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 vfu_A02184 2b4938a9a21d78e53f08d66cf9569e50 562 SUPERFAMILY SSF53223 4 267 7.91E-109 T 12-10-2018 vfu_B01411 830cc0b47609de9899b234fd5651727b 297 SUPERFAMILY SSF53850 92 294 3.1E-39 T 12-10-2018 vfu_B01411 830cc0b47609de9899b234fd5651727b 297 SUPERFAMILY SSF46785 5 113 4.36E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01411 830cc0b47609de9899b234fd5651727b 297 Gene3D G3DSA:1.10.10.10 5 93 3.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01411 830cc0b47609de9899b234fd5651727b 297 Gene3D G3DSA:3.40.190.290 94 295 9.7E-51 T 12-10-2018 vfu_B01411 830cc0b47609de9899b234fd5651727b 297 Pfam PF03466 LysR substrate binding domain 91 294 9.4E-35 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01411 830cc0b47609de9899b234fd5651727b 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.6E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01385 080748cac5cf9bf6eca763139f596297 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site vfu_A01385 080748cac5cf9bf6eca763139f596297 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 238 9.6E-9 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_A01385 080748cac5cf9bf6eca763139f596297 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 5.6E-113 T 12-10-2018 IPR022522 Flagellar motor stator, MotA vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 Gene3D G3DSA:2.40.50.140 29 122 2.3E-32 T 12-10-2018 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 Pfam PF10150 Ribonuclease E/G family 118 387 1.3E-93 T 12-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 SMART SM00316 34 116 6.8E-11 T 12-10-2018 IPR022967 RNA-binding domain, S1 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 Gene3D G3DSA:3.40.1260.20 397 505 3.5E-39 T 12-10-2018 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 Hamap MF_00970 Ribonuclease E [rne]. 1 1031 35.678 T 12-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 Pfam PF00575 S1 RNA binding domain 34 115 6.7E-14 T 12-10-2018 IPR003029 S1 domain GO:0003676 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 3.1E-170 T 12-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 vfu_A01300 7a0d15d918ff64a68f8cef63862404c7 1044 SUPERFAMILY SSF50249 37 121 1.61E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A02253 b23a48f4f538dce8306ac58472a6c592 271 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 251 271 2.0E-5 T 12-10-2018 vfu_A02253 b23a48f4f538dce8306ac58472a6c592 271 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 213 230 2.0E-5 T 12-10-2018 vfu_A02253 b23a48f4f538dce8306ac58472a6c592 271 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 231 250 2.0E-5 T 12-10-2018 vfu_A02253 b23a48f4f538dce8306ac58472a6c592 271 Pfam PF00691 OmpA family 167 262 2.2E-13 T 12-10-2018 IPR006665 OmpA-like domain vfu_A02253 b23a48f4f538dce8306ac58472a6c592 271 SUPERFAMILY SSF103088 141 267 1.83E-24 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02253 b23a48f4f538dce8306ac58472a6c592 271 Gene3D G3DSA:3.30.1330.60 156 271 3.7E-27 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A00683 73e6eb042b1744fac4a3ac82df9b4794 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.576 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00683 73e6eb042b1744fac4a3ac82df9b4794 117 SUPERFAMILY SSF53137 3 115 2.83E-50 T 12-10-2018 vfu_A00683 73e6eb042b1744fac4a3ac82df9b4794 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.5E-42 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00683 73e6eb042b1744fac4a3ac82df9b4794 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.4E-43 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A00683 73e6eb042b1744fac4a3ac82df9b4794 117 Gene3D G3DSA:3.30.420.100 1 117 1.0E-42 T 12-10-2018 vfu_A02236 b4e2ee68794c8b50b4a8f8c5e63881b0 300 Pfam PF02120 Flagellar hook-length control protein FliK 181 259 7.5E-16 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal vfu_A02236 b4e2ee68794c8b50b4a8f8c5e63881b0 300 Gene3D G3DSA:3.30.750.140 158 272 4.0E-15 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily vfu_A03007 edd146dd8b2a6f264da874eaa3feef38 602 SUPERFAMILY SSF46894 571 601 6.04E-5 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A03007 edd146dd8b2a6f264da874eaa3feef38 602 Gene3D G3DSA:1.10.10.10 569 601 1.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A03007 edd146dd8b2a6f264da874eaa3feef38 602 Pfam PF00196 Bacterial regulatory proteins, luxR family 574 601 1.7E-5 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00165 32633d7c2f331de984ae4cc84be6c64b 461 Pfam PF00860 Permease family 22 409 6.5E-90 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 vfu_B00165 32633d7c2f331de984ae4cc84be6c64b 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 vfu_B00165 32633d7c2f331de984ae4cc84be6c64b 461 TIGRFAM TIGR03173 pbuX: xanthine permease 26 441 1.1E-132 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 vfu_B00165 32633d7c2f331de984ae4cc84be6c64b 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 439 1.2E-110 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 69 85 6.4E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 52 68 6.4E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 85 98 6.4E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 PRINTS PR00956 Flagellar motor switch protein FliN signature 98 113 6.4E-17 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 Gene3D G3DSA:2.30.330.10 39 128 2.2E-23 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 53 122 6.5E-19 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) vfu_A02268 bd4a24139326afecd31efa3ad9cc6c4f 128 SUPERFAMILY SSF101801 49 125 5.62E-19 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 Gene3D G3DSA:1.20.1050.10 88 215 3.1E-48 T 12-10-2018 vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 Pfam PF14497 Glutathione S-transferase, C-terminal domain 125 202 3.6E-6 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 Gene3D G3DSA:3.40.30.10 6 82 2.1E-26 T 12-10-2018 vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 SUPERFAMILY SSF52833 4 89 2.78E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 SUPERFAMILY SSF47616 85 213 1.85E-31 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 5 214 7.7E-91 T 12-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 vfu_A01830 9d1e4dbf58f1472945fa4e29171d140a 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 83 6.8E-16 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_A01749 69b345b53082a6c98404426e48f36d4f 517 SUPERFAMILY SSF47090 195 270 2.82E-12 T 12-10-2018 IPR036365 PGBD-like superfamily vfu_A01749 69b345b53082a6c98404426e48f36d4f 517 SUPERFAMILY SSF141523 287 450 1.7E-18 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like vfu_A01749 69b345b53082a6c98404426e48f36d4f 517 Pfam PF03734 L,D-transpeptidase catalytic domain 290 458 8.7E-29 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 vfu_A01749 69b345b53082a6c98404426e48f36d4f 517 Pfam PF01471 Putative peptidoglycan binding domain 210 263 1.7E-8 T 12-10-2018 IPR002477 Peptidoglycan binding-like vfu_A01678 840227634463c7f10b051d5573abd56b 381 SUPERFAMILY SSF53850 31 377 2.0E-42 T 12-10-2018 vfu_A01678 840227634463c7f10b051d5573abd56b 381 Pfam PF13416 Bacterial extracellular solute-binding protein 55 326 1.8E-25 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A01678 840227634463c7f10b051d5573abd56b 381 Gene3D G3DSA:3.40.190.10 32 135 4.3E-6 T 12-10-2018 vfu_A01678 840227634463c7f10b051d5573abd56b 381 PIRSF PIRSF029172 1 380 6.2E-171 T 12-10-2018 IPR027020 Protein ynjB vfu_A01678 840227634463c7f10b051d5573abd56b 381 Gene3D G3DSA:3.40.190.10 154 332 1.4E-10 T 12-10-2018 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 Gene3D G3DSA:3.30.460.30 1 156 4.8E-58 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 8.0E-146 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 SUPERFAMILY SSF69075 315 416 2.75E-26 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.5E-50 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 PIRSF PIRSF000445 1 419 1.4E-156 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 SUPERFAMILY SSF69742 1 156 2.75E-48 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 SUPERFAMILY SSF51735 161 313 3.24E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 Gene3D G3DSA:3.40.50.720 159 311 1.9E-44 T 12-10-2018 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.2E-51 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.651 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01141 770aabd00feb1317e9df4e95ed8bec42 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 2.3E-21 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 vfu_A01099 fcba9fe928d71d79abbde666702704f3 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A01099 fcba9fe928d71d79abbde666702704f3 212 SUPERFAMILY SSF53328 4 199 1.7E-64 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A01099 fcba9fe928d71d79abbde666702704f3 212 Gene3D G3DSA:3.40.50.170 3 212 7.1E-84 T 12-10-2018 vfu_A01099 fcba9fe928d71d79abbde666702704f3 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 2.1E-76 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 vfu_A01099 fcba9fe928d71d79abbde666702704f3 212 Pfam PF00551 Formyl transferase 3 182 9.4E-63 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 vfu_A01099 fcba9fe928d71d79abbde666702704f3 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.248 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 8 363 1.3E-161 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 PIRSF PIRSF000525 2 364 1.2E-153 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 Gene3D G3DSA:3.90.1150.10 262 364 2.3E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 Pfam PF00266 Aminotransferase class-V 8 352 6.1E-62 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 SUPERFAMILY SSF53383 7 360 1.52E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 Gene3D G3DSA:3.40.640.10 21 261 1.2E-89 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02295 37abdbc6778b296e141e460b9854fe97 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 6 363 51.876 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 8.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 8.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 8.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 8.3E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 3.8E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 SUPERFAMILY SSF46785 8 96 8.51E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 Gene3D G3DSA:1.10.10.10 1 98 1.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00977 50eee9a80f375acda892ba844c3730dd 98 SMART SM00418 15 93 1.0E-29 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A02939 765ba9ef69422511f059de678750e437 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.81 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 vfu_A02939 765ba9ef69422511f059de678750e437 87 Pfam PF04999 Cell division protein FtsL 2 85 8.2E-33 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 vfu_A02939 765ba9ef69422511f059de678750e437 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 2 84 2.9E-26 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 vfu_B00582 6cfd109c516a93da66ea8b5e592f600a 286 SMART SM00849 36 221 1.3E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_B00582 6cfd109c516a93da66ea8b5e592f600a 286 Gene3D G3DSA:3.60.15.10 20 255 2.0E-25 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_B00582 6cfd109c516a93da66ea8b5e592f600a 286 SUPERFAMILY SSF56281 16 261 7.28E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_B00582 6cfd109c516a93da66ea8b5e592f600a 286 Pfam PF00753 Metallo-beta-lactamase superfamily 36 116 2.2E-7 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A01910 eacde3d5dc0c423ac8b9c99956017eac 328 Pfam PF08495 FIST N domain 12 158 7.1E-17 T 12-10-2018 IPR013702 FIST domain, N-terminal vfu_A01910 eacde3d5dc0c423ac8b9c99956017eac 328 SMART SM00897 12 159 1.4E-6 T 12-10-2018 IPR013702 FIST domain, N-terminal vfu_A01910 eacde3d5dc0c423ac8b9c99956017eac 328 SMART SM01204 160 307 9.2E-28 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 vfu_A01910 eacde3d5dc0c423ac8b9c99956017eac 328 Pfam PF10442 FIST C domain 160 306 1.3E-17 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 Pfam PF00625 Guanylate kinase 5 185 2.7E-60 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 Gene3D G3DSA:3.40.50.300 8 183 1.5E-73 T 12-10-2018 vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.793 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 Gene3D G3DSA:3.30.63.10 37 96 1.5E-73 T 12-10-2018 vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 SUPERFAMILY SSF52540 3 189 3.36E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.4E-75 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 vfu_A00546 adb4bad0e877aa714f68e3ed2596562e 207 SMART SM00072 3 187 1.2E-74 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit vfu_A01751 8c906ec49a04be993409efb1a182118c 218 SMART SM00849 14 195 5.2E-35 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A01751 8c906ec49a04be993409efb1a182118c 218 Pfam PF00753 Metallo-beta-lactamase superfamily 11 195 1.5E-27 T 12-10-2018 IPR001279 Metallo-beta-lactamase vfu_A01751 8c906ec49a04be993409efb1a182118c 218 Gene3D G3DSA:3.60.15.10 3 213 8.0E-74 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A01751 8c906ec49a04be993409efb1a182118c 218 SUPERFAMILY SSF56281 4 211 3.52E-53 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like vfu_A02794 c86cbb263f357735e19ee28f548cc173 110 SMART SM01323 18 102 9.8E-38 T 12-10-2018 IPR003849 Preprotein translocase YajC vfu_A02794 c86cbb263f357735e19ee28f548cc173 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 3.3E-29 T 12-10-2018 IPR003849 Preprotein translocase YajC vfu_A02794 c86cbb263f357735e19ee28f548cc173 110 Pfam PF02699 Preprotein translocase subunit 22 99 1.0E-25 T 12-10-2018 IPR003849 Preprotein translocase YajC vfu_A02794 c86cbb263f357735e19ee28f548cc173 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 9.7E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC vfu_A02794 c86cbb263f357735e19ee28f548cc173 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 9.7E-16 T 12-10-2018 IPR003849 Preprotein translocase YajC vfu_B00373 8b28704bf9f64463b8c85ae664852c3f 75 SUPERFAMILY SSF63999 3 50 2.75E-6 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 vfu_A03137 21a3b50ac7f9422011348eb845dbe42e 221 Pfam PF13505 Outer membrane protein beta-barrel domain 9 221 9.0E-17 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel vfu_A03137 21a3b50ac7f9422011348eb845dbe42e 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 8 221 1.9E-52 T 12-10-2018 IPR026387 Outer membrane protein vfu_A00369 b32b864e5e2f4f5b3c097a20db50a906 400 SUPERFAMILY SSF51391 183 383 6.02E-57 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A00369 b32b864e5e2f4f5b3c097a20db50a906 400 Gene3D G3DSA:3.20.20.70 176 387 4.5E-54 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00369 b32b864e5e2f4f5b3c097a20db50a906 400 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 170 386 18.924 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A00369 b32b864e5e2f4f5b3c097a20db50a906 400 Pfam PF02581 Thiamine monophosphate synthase 191 368 2.4E-50 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A00369 b32b864e5e2f4f5b3c097a20db50a906 400 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 193 380 7.0E-45 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A00049 391bb370712fc669d0e40da70cbc9d40 128 Gene3D G3DSA:3.40.630.30 2 106 9.4E-9 T 12-10-2018 vfu_A00049 391bb370712fc669d0e40da70cbc9d40 128 SUPERFAMILY SSF55729 11 97 1.34E-9 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00049 391bb370712fc669d0e40da70cbc9d40 128 Pfam PF13673 Acetyltransferase (GNAT) domain 7 98 3.2E-9 T 12-10-2018 IPR000182 GNAT domain vfu_B01114 3d3ac7103a052202ebc81632f6d01c30 359 SUPERFAMILY SSF53383 25 316 4.72E-68 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01114 3d3ac7103a052202ebc81632f6d01c30 359 Gene3D G3DSA:3.40.640.10 3 253 2.9E-64 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B01114 3d3ac7103a052202ebc81632f6d01c30 359 Pfam PF01212 Beta-eliminating lyase 27 244 2.7E-30 T 12-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 vfu_B01114 3d3ac7103a052202ebc81632f6d01c30 359 Gene3D G3DSA:3.90.1150.10 255 357 1.9E-5 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02638 27b4a317eb4f96741ce789e2e97731a0 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 6.5E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 vfu_A02638 27b4a317eb4f96741ce789e2e97731a0 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 vfu_A02638 27b4a317eb4f96741ce789e2e97731a0 169 Gene3D G3DSA:2.70.70.10 9 169 1.3E-61 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A02638 27b4a317eb4f96741ce789e2e97731a0 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.4E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 vfu_A02638 27b4a317eb4f96741ce789e2e97731a0 169 SUPERFAMILY SSF51261 18 166 5.41E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A03114 3fdf3f4c15bb9994d583f778486bddcb 280 SUPERFAMILY SSF52540 11 248 8.63E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03114 3fdf3f4c15bb9994d583f778486bddcb 280 Gene3D G3DSA:3.40.50.300 30 183 5.2E-11 T 12-10-2018 vfu_A03114 3fdf3f4c15bb9994d583f778486bddcb 280 Pfam PF13401 AAA domain 42 167 5.5E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00261 895d96da3f78b57832cf48f519243949 182 SUPERFAMILY SSF51161 4 171 9.84E-43 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_A00261 895d96da3f78b57832cf48f519243949 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 5.8E-7 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00261 895d96da3f78b57832cf48f519243949 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 40 0.0011 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A00261 895d96da3f78b57832cf48f519243949 182 Gene3D G3DSA:2.160.10.10 1 181 2.6E-54 T 12-10-2018 vfu_A00430 357737357291c46715cbafc0cdfc77c9 393 SUPERFAMILY SSF48452 306 389 9.21E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A00430 357737357291c46715cbafc0cdfc77c9 393 Pfam PF07219 HemY protein N-terminus 26 132 7.4E-27 T 12-10-2018 IPR010817 HemY, N-terminal vfu_A00430 357737357291c46715cbafc0cdfc77c9 393 SUPERFAMILY SSF48452 85 209 7.17E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A00430 357737357291c46715cbafc0cdfc77c9 393 SMART SM00028 327 360 0.0053 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A00430 357737357291c46715cbafc0cdfc77c9 393 Pfam PF07719 Tetratricopeptide repeat 327 356 1.9E-5 T 12-10-2018 IPR013105 Tetratricopeptide repeat 2 vfu_A00430 357737357291c46715cbafc0cdfc77c9 393 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 3 386 2.7E-117 T 12-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 vfu_B00404 d5774d54fc95fb85e97e6e162a729d4a 95 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 13 90 7.0E-15 T 12-10-2018 IPR019289 Bacteriophage tail protein Gp41, putative vfu_A01491 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 13 270 1.7E-99 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 vfu_A01491 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 Pfam PF08543 Phosphomethylpyrimidine kinase 20 268 7.4E-93 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 vfu_A01491 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 SUPERFAMILY SSF53613 9 272 2.81E-81 T 12-10-2018 IPR029056 Ribokinase-like vfu_A01491 59eeb7be4258cb6aa7b0994bbe0dbeb7 284 Gene3D G3DSA:3.40.1190.20 3 282 1.4E-101 T 12-10-2018 IPR029056 Ribokinase-like vfu_A01043 ac4a858f6999cde78b9bcbaec0be7a37 146 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 2.2E-47 T 12-10-2018 vfu_A01043 ac4a858f6999cde78b9bcbaec0be7a37 146 Gene3D G3DSA:2.40.70.10 3 133 1.5E-33 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily vfu_A01043 ac4a858f6999cde78b9bcbaec0be7a37 146 SUPERFAMILY SSF50630 6 140 2.31E-43 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily vfu_B01476 347e869124da8b67ff19a7b65234879c 173 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 25 161 1.4E-24 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A02985 01cfab0d3ebddc064d9c584d2da2b491 255 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 237 2.1E-71 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 vfu_A02985 01cfab0d3ebddc064d9c584d2da2b491 255 Gene3D G3DSA:3.40.1210.10 1 254 3.2E-95 T 12-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 vfu_A02985 01cfab0d3ebddc064d9c584d2da2b491 255 SUPERFAMILY SSF64167 6 250 9.94E-86 T 12-10-2018 vfu_A02985 01cfab0d3ebddc064d9c584d2da2b491 255 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 6 254 41.357 T 12-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 vfu_A02985 01cfab0d3ebddc064d9c584d2da2b491 255 Pfam PF01975 Survival protein SurE 8 186 7.4E-60 T 12-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 vfu_B01046 e6e00876eeb3c9b831b1680115e667a6 147 SUPERFAMILY SSF110087 3 142 8.24E-49 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily vfu_B01046 e6e00876eeb3c9b831b1680115e667a6 147 Gene3D G3DSA:2.60.40.1890 29 144 3.9E-40 T 12-10-2018 IPR036182 Copper chaperone PCuAC superfamily vfu_B01046 e6e00876eeb3c9b831b1680115e667a6 147 Pfam PF04314 Copper chaperone PCu(A)C 25 131 1.9E-38 T 12-10-2018 IPR007410 Copper chaperone PCuAC vfu_B00409 0efa0a18a60ca214a9265a0dcb6b4e3c 102 Gene3D G3DSA:1.20.1280.290 42 101 3.2E-6 T 12-10-2018 vfu_B00409 0efa0a18a60ca214a9265a0dcb6b4e3c 102 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 19 89 2.0E-29 T 12-10-2018 IPR020137 Uncharacterised protein family HI1736 vfu_B00409 0efa0a18a60ca214a9265a0dcb6b4e3c 102 Pfam PF10688 Bacterial inner membrane protein 20 89 1.2E-8 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 SMART SM00382 28 211 5.0E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:2.40.50.940 222 352 5.0E-32 T 12-10-2018 vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 Pfam PF00005 ABC transporter 20 161 4.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:2.40.50.140 288 343 5.0E-32 T 12-10-2018 vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 SUPERFAMILY SSF52540 4 243 1.36E-85 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 Gene3D G3DSA:3.40.50.300 4 221 1.8E-64 T 12-10-2018 vfu_A02094 0593c4106078f5b1c6ed55c864ac5a5f 367 SUPERFAMILY SSF50331 236 359 1.53E-25 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_A02855 e74dca4d207399b94459d24d752ebd8b 486 Gene3D G3DSA:3.40.50.300 231 460 1.4E-70 T 12-10-2018 vfu_A02855 e74dca4d207399b94459d24d752ebd8b 486 Pfam PF00437 Type II/IV secretion system protein 135 412 3.2E-84 T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A02855 e74dca4d207399b94459d24d752ebd8b 486 Gene3D G3DSA:3.30.450.380 37 230 2.7E-43 T 12-10-2018 vfu_A02855 e74dca4d207399b94459d24d752ebd8b 486 SUPERFAMILY SSF52540 118 449 7.02E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 SMART SM00347 30 131 7.9E-21 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.7E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 Pfam PF01047 MarR family 37 95 1.2E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 SUPERFAMILY SSF46785 10 146 1.06E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site vfu_B00852 685c39eee179a0afc6ed26a498e81c31 156 Gene3D G3DSA:1.10.10.10 5 155 9.5E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 SUPERFAMILY SSF46548 104 232 4.19E-40 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 Gene3D G3DSA:3.10.20.30 1 103 1.9E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 146 157 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 SUPERFAMILY SSF54292 1 103 5.49E-29 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 Gene3D G3DSA:1.10.1060.10 104 235 2.2E-56 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 Pfam PF13534 4Fe-4S dicluster domain 145 218 1.4E-10 T 12-10-2018 vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 108 1.8E-29 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01233 dd8991ce68c8d4997da9b203ec8c5302 235 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 227 3.1E-85 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A01531 220b4826134d2b34e80b6f7b1fe2e595 149 Gene3D G3DSA:3.40.50.150 1 149 5.2E-25 T 12-10-2018 vfu_A01531 220b4826134d2b34e80b6f7b1fe2e595 149 Pfam PF00891 O-methyltransferase 2 126 8.9E-5 T 12-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 vfu_A01531 220b4826134d2b34e80b6f7b1fe2e595 149 SUPERFAMILY SSF53335 1 133 3.85E-16 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01407 d2be31a719ba444383bf6e4537c53fe4 247 Pfam PF02108 Flagellar assembly protein FliH 104 225 1.9E-27 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE vfu_A01407 d2be31a719ba444383bf6e4537c53fe4 247 SUPERFAMILY SSF160527 131 232 1.14E-5 T 12-10-2018 vfu_A01345 2325714bcd7b1fbcaedd2d415e5d48bb 307 Pfam PF03601 Conserved hypothetical protein 698 27 288 2.1E-52 T 12-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 Gene3D G3DSA:3.40.47.10 4 267 5.8E-152 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 60.327 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 PIRSF PIRSF000429 1 387 1.1E-133 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.3E-143 T 12-10-2018 IPR002155 Thiolase GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 5.2E-84 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 8.6E-237 T 12-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.5E-48 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 Gene3D G3DSA:3.40.47.10 134 381 5.8E-152 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 SUPERFAMILY SSF53901 263 386 1.98E-44 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A00357 45860852ad84ae0bfe32a520bb2ca01e 387 SUPERFAMILY SSF53901 1 258 2.57E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_B00952 919027e6c33a7d21e18b639e12f941d9 413 Pfam PF00266 Aminotransferase class-V 26 243 2.4E-40 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_B00952 919027e6c33a7d21e18b639e12f941d9 413 Pfam PF00266 Aminotransferase class-V 309 403 4.2E-7 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_B00952 919027e6c33a7d21e18b639e12f941d9 413 Gene3D G3DSA:3.40.640.10 33 293 7.8E-95 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_B00952 919027e6c33a7d21e18b639e12f941d9 413 Gene3D G3DSA:3.90.1150.10 25 407 7.8E-95 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_B00952 919027e6c33a7d21e18b639e12f941d9 413 SUPERFAMILY SSF53383 5 411 4.71E-71 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_B01030 5395c074f2e00f63c5b792f148d78594 287 Gene3D G3DSA:3.40.50.300 3 247 5.5E-45 T 12-10-2018 vfu_B01030 5395c074f2e00f63c5b792f148d78594 287 Pfam PF00005 ABC transporter 23 160 3.8E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01030 5395c074f2e00f63c5b792f148d78594 287 SMART SM00382 32 210 1.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B01030 5395c074f2e00f63c5b792f148d78594 287 SUPERFAMILY SSF52540 3 224 3.49E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01272 11910141bedfbf41e65c52a5e8b06bb4 306 Gene3D G3DSA:3.40.630.10 4 305 1.9E-115 T 12-10-2018 vfu_B01272 11910141bedfbf41e65c52a5e8b06bb4 306 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 176 2.3E-8 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 vfu_B01272 11910141bedfbf41e65c52a5e8b06bb4 306 SUPERFAMILY SSF53187 37 292 1.39E-34 T 12-10-2018 vfu_A02264 8517e95a82d855ae34c545d6428e6905 164 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 78 1.8E-18 T 12-10-2018 IPR005648 Flagellar hook capping protein vfu_A02264 8517e95a82d855ae34c545d6428e6905 164 Gene3D G3DSA:2.30.30.910 95 105 1.1E-7 T 12-10-2018 vfu_A02264 8517e95a82d855ae34c545d6428e6905 164 Gene3D G3DSA:2.60.40.4070 106 143 1.1E-7 T 12-10-2018 vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 Gene3D G3DSA:2.40.30.20 94 190 1.9E-28 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 SUPERFAMILY SSF63380 1 93 6.12E-26 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 PIRSF PIRSF000498 1 203 2.2E-68 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 Gene3D G3DSA:2.40.30.20 1 89 1.5E-30 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 SUPERFAMILY SSF63380 93 198 1.87E-30 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.6E-74 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 Pfam PF00677 Lumazine binding domain 3 87 2.6E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A01858 b79fbfd848626df262f62a2914d9a2c6 203 Pfam PF00677 Lumazine binding domain 100 184 1.1E-21 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 vfu_A02187 f4602fac000edd16f0d16a0d5b24cc23 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 7.0E-14 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain vfu_A02187 f4602fac000edd16f0d16a0d5b24cc23 100 SUPERFAMILY SSF54909 1 98 1.61E-24 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A02187 f4602fac000edd16f0d16a0d5b24cc23 100 Gene3D G3DSA:3.30.70.100 1 93 1.2E-24 T 12-10-2018 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 Gene3D G3DSA:1.10.10.10 9 81 2.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 SUPERFAMILY SSF46785 13 81 3.7E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 Pfam PF01316 Arginine repressor, DNA binding domain 18 80 2.2E-14 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 SUPERFAMILY SSF55252 91 155 1.44E-16 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 Pfam PF02863 Arginine repressor, C-terminal domain 93 151 6.2E-18 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 Gene3D G3DSA:3.30.1360.40 82 160 4.9E-21 T 12-10-2018 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 96 136 3.0E-14 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 49 64 2.7E-19 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 32 45 2.7E-19 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 97 110 2.7E-19 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 PRINTS PR01467 Bacterial arginine repressor signature 127 142 2.7E-19 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A00556 de8037b3656ee1eb8c5a8fa332133b65 161 Hamap MF_00173 Arginine repressor [argR]. 1 161 40.923 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 vfu_A01185 1e5d54b5a085ff75a994dd3cfea6472b 136 SUPERFAMILY SSF101116 6 127 1.7E-38 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 vfu_A01185 1e5d54b5a085ff75a994dd3cfea6472b 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 1.0E-22 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A01185 1e5d54b5a085ff75a994dd3cfea6472b 136 PIRSF PIRSF039090 1 133 9.9E-43 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A01185 1e5d54b5a085ff75a994dd3cfea6472b 136 Gene3D G3DSA:1.20.120.340 2 126 1.1E-38 T 12-10-2018 vfu_A01185 1e5d54b5a085ff75a994dd3cfea6472b 136 Pfam PF02561 Flagellar protein FliS 6 122 3.8E-37 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 vfu_A02763 54477a74043689f0d1eefd08e0b3615f 173 Gene3D G3DSA:3.40.50.300 2 159 3.8E-43 T 12-10-2018 vfu_A02763 54477a74043689f0d1eefd08e0b3615f 173 Pfam PF13481 AAA domain 8 66 4.3E-11 T 12-10-2018 vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 SUPERFAMILY SSF54909 63 145 1.61E-13 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 Gene3D G3DSA:1.10.10.10 1 52 2.8E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 SMART SM00344 1 111 6.6E-18 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 Gene3D G3DSA:3.30.70.920 55 148 4.6E-15 T 12-10-2018 vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.0E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.0E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.0E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 Pfam PF01037 Lrp/AsnC ligand binding domain 79 141 2.4E-13 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 SUPERFAMILY SSF46785 1 55 6.11E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01293 3ed99be9fd5c951afe7a8af0bae81141 149 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.4E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00157 5e4c98a69e8b589bb42e30f6ab63d608 279 Pfam PF13649 Methyltransferase domain 71 166 1.4E-17 T 12-10-2018 vfu_B00157 5e4c98a69e8b589bb42e30f6ab63d608 279 SUPERFAMILY SSF53335 56 279 1.51E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00157 5e4c98a69e8b589bb42e30f6ab63d608 279 Gene3D G3DSA:3.40.50.150 15 263 5.7E-27 T 12-10-2018 vfu_A02195 2b78c5dca17fbff71287a75f50400734 408 SUPERFAMILY SSF53383 5 407 2.15E-96 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A02195 2b78c5dca17fbff71287a75f50400734 408 Gene3D G3DSA:3.40.640.10 33 289 1.6E-136 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02195 2b78c5dca17fbff71287a75f50400734 408 Gene3D G3DSA:3.90.1150.10 24 405 1.6E-136 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02195 2b78c5dca17fbff71287a75f50400734 408 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 1.8E-163 T 12-10-2018 IPR011340 Cysteine desulfurase-related vfu_A02195 2b78c5dca17fbff71287a75f50400734 408 Pfam PF00266 Aminotransferase class-V 25 401 2.5E-72 T 12-10-2018 IPR000192 Aminotransferase class V domain vfu_A00996 7cae475c8700b525b6687c99b89b205f 115 Gene3D G3DSA:3.40.50.300 1 115 1.0E-29 T 12-10-2018 vfu_A00996 7cae475c8700b525b6687c99b89b205f 115 Pfam PF00005 ABC transporter 3 33 2.6E-6 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00996 7cae475c8700b525b6687c99b89b205f 115 SUPERFAMILY SSF52540 2 91 1.46E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00809 3a63203d312c3b18b84a51428e224688 213 SUPERFAMILY SSF48498 91 209 1.68E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A00809 3a63203d312c3b18b84a51428e224688 213 SUPERFAMILY SSF46689 10 87 2.31E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00809 3a63203d312c3b18b84a51428e224688 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 1.8E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A00809 3a63203d312c3b18b84a51428e224688 213 Gene3D G3DSA:1.10.357.10 2 213 4.1E-59 T 12-10-2018 vfu_A01104 4ca3a8ced02bb6a917e1ea92f40ecb64 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 2.9E-16 T 12-10-2018 IPR021494 Protein of unknown function DUF3149 vfu_A01756 1b90618d7d1a7f9075f7dabcc9bb94d6 179 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.7E-25 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_B00420 341bfd29fb63ca7c9e9d9bdb020c3f0c 403 Pfam PF13439 Glycosyltransferase Family 4 14 219 6.7E-13 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 vfu_B00420 341bfd29fb63ca7c9e9d9bdb020c3f0c 403 Pfam PF00534 Glycosyl transferases group 1 227 377 6.2E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_B00420 341bfd29fb63ca7c9e9d9bdb020c3f0c 403 SUPERFAMILY SSF53756 1 399 2.98E-71 T 12-10-2018 vfu_B00420 341bfd29fb63ca7c9e9d9bdb020c3f0c 403 Gene3D G3DSA:3.40.50.2000 224 379 5.1E-36 T 12-10-2018 vfu_A02162 9fb03b67153d7e8a541efe34ec87d344 229 PIRSF PIRSF028111 2 229 4.9E-82 T 12-10-2018 IPR016868 Bacteriophage B3, Orf5 vfu_A02162 9fb03b67153d7e8a541efe34ec87d344 229 Pfam PF10979 Protein of unknown function (DUF2786) 7 44 2.8E-12 T 12-10-2018 IPR024498 Domain of unknown function DUF2786 vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 9.7E-5 T 12-10-2018 vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 Gene3D G3DSA:3.40.50.720 1 252 3.5E-73 T 12-10-2018 vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 4.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 4.4E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 SUPERFAMILY SSF51735 5 251 7.27E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.0E-53 T 12-10-2018 vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B01434 5dac3f349e0e3df6c8d6d546d938c572 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 1.3E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00120 8dcbb2c300c03bae943cb65f6cbb31d6 340 SUPERFAMILY SSF56059 101 292 2.42E-15 T 12-10-2018 vfu_A00120 8dcbb2c300c03bae943cb65f6cbb31d6 340 Gene3D G3DSA:3.30.470.20 213 312 6.0E-5 T 12-10-2018 vfu_A01027 035f235bbc566320a97e566779f19d31 102 SUPERFAMILY SSF82657 1 87 2.49E-32 T 12-10-2018 IPR036065 BolA-like superfamily vfu_A01027 035f235bbc566320a97e566779f19d31 102 Pfam PF01722 BolA-like protein 10 83 8.5E-31 T 12-10-2018 IPR002634 BolA protein vfu_A01027 035f235bbc566320a97e566779f19d31 102 PIRSF PIRSF003113 1 99 2.1E-37 T 12-10-2018 IPR002634 BolA protein vfu_A01027 035f235bbc566320a97e566779f19d31 102 Gene3D G3DSA:3.30.300.90 1 89 1.5E-34 T 12-10-2018 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 Pfam PF13416 Bacterial extracellular solute-binding protein 35 312 1.9E-43 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 284 305 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 342 361 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 21 39 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 156 175 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 115 134 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 55 73 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 136 155 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 PRINTS PR00181 Maltose binding protein signature 218 237 1.1E-78 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 SUPERFAMILY SSF53850 13 380 3.52E-89 T 12-10-2018 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 118 135 - T 12-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 Gene3D G3DSA:3.40.190.10 33 342 3.5E-134 T 12-10-2018 vfu_B01262 f42290227d8d25b309b1b751449470c4 381 Gene3D G3DSA:3.40.190.10 123 373 3.5E-134 T 12-10-2018 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 SUPERFAMILY SSF52518 335 526 6.78E-68 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.1E-47 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 9.6E-20 T 12-10-2018 IPR033248 Transketolase, C-terminal domain vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 SUPERFAMILY SSF52922 533 664 1.57E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 SUPERFAMILY SSF52518 5 319 1.36E-120 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 2.9E-167 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 Gene3D G3DSA:3.40.50.920 538 664 4.2E-45 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 SMART SM00861 354 525 1.1E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 Gene3D G3DSA:3.40.50.970 326 537 3.5E-84 T 12-10-2018 vfu_A03040 63f25ef5e32160e1a2cebd8ee8f548da 664 Gene3D G3DSA:3.40.50.970 1 325 1.6E-131 T 12-10-2018 vfu_A02469 d419fe3030e0a64e2cb16ce2a6598e60 270 Pfam PF13614 AAA domain 2 159 6.6E-19 T 12-10-2018 IPR025669 AAA domain vfu_A02469 d419fe3030e0a64e2cb16ce2a6598e60 270 PIRSF PIRSF003092 1 270 3.3E-94 T 12-10-2018 IPR025501 ATP binding protein MinD vfu_A02469 d419fe3030e0a64e2cb16ce2a6598e60 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 4.6E-110 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 vfu_A02469 d419fe3030e0a64e2cb16ce2a6598e60 270 Gene3D G3DSA:3.40.50.300 1 260 1.8E-73 T 12-10-2018 vfu_A02469 d419fe3030e0a64e2cb16ce2a6598e60 270 SUPERFAMILY SSF52540 1 268 3.68E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00491 f46cf238969153c0038d56b14f9b40db 663 SUPERFAMILY SSF56935 33 663 4.4E-82 T 12-10-2018 vfu_B00491 f46cf238969153c0038d56b14f9b40db 663 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 45 663 1.3E-93 T 12-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 vfu_B00491 f46cf238969153c0038d56b14f9b40db 663 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 133 1.4E-12 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_B00491 f46cf238969153c0038d56b14f9b40db 663 Gene3D G3DSA:2.170.130.10 37 144 3.4E-30 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_B00491 f46cf238969153c0038d56b14f9b40db 663 Gene3D G3DSA:2.40.170.20 146 663 1.0E-98 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_B00491 f46cf238969153c0038d56b14f9b40db 663 Pfam PF00593 TonB dependent receptor 231 662 1.3E-40 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 SUPERFAMILY SSF53335 5 268 8.31E-73 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 PIRSF PIRSF000398 1 275 4.8E-71 T 12-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.8E-17 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.8E-17 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.8E-17 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.8E-17 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 Gene3D G3DSA:3.40.50.150 7 239 2.8E-81 T 12-10-2018 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 2.9E-68 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.2E-93 T 12-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 vfu_A00637 2c5c45f06bbc429b2451a7cfc3614d68 276 Gene3D G3DSA:1.10.1020.10 57 156 2.8E-81 T 12-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 vfu_A02190 02e898a20b20a665881fcb5c3dcb80cd 400 Pfam PF07690 Major Facilitator Superfamily 15 333 5.6E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02190 02e898a20b20a665881fcb5c3dcb80cd 400 Gene3D G3DSA:1.20.1250.20 207 393 5.3E-12 T 12-10-2018 vfu_A02190 02e898a20b20a665881fcb5c3dcb80cd 400 SUPERFAMILY SSF103473 3 391 2.35E-34 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02190 02e898a20b20a665881fcb5c3dcb80cd 400 Gene3D G3DSA:1.20.1250.20 5 193 2.7E-9 T 12-10-2018 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 Gene3D G3DSA:3.90.79.10 1 132 9.3E-41 T 12-10-2018 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.8E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.8E-9 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 SUPERFAMILY SSF55811 1 128 2.03E-33 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 Pfam PF00293 NUDIX domain 5 126 1.6E-19 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A02924 2c2a7c875f8e6892afdbbfe9bd504731 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 4.6E-41 T 12-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 SUPERFAMILY SSF50129 1 96 4.71E-31 T 12-10-2018 IPR011032 GroES-like superfamily vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.67 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 SMART SM00883 2 95 2.1E-49 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 25 46 1.0E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 3 18 1.0E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 60 72 1.0E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 PRINTS PR00297 10kDa chaperonin signature 82 95 1.0E-27 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 Gene3D G3DSA:2.30.33.40 1 96 1.4E-36 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 vfu_A00601 e7135d8409cce3d3f4902b629eac9053 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 4.9E-31 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF51971 189 429 1.94E-61 T 12-10-2018 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 PRINTS PR00419 Adrenodoxin reductase family signature 191 213 1.8E-16 T 12-10-2018 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 PRINTS PR00419 Adrenodoxin reductase family signature 214 227 1.8E-16 T 12-10-2018 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 PRINTS PR00419 Adrenodoxin reductase family signature 322 336 1.8E-16 T 12-10-2018 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 93 174 7.9E-20 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 73 7.2E-7 T 12-10-2018 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF46548 553 598 3.4E-7 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:1.10.1060.10 76 189 1.8E-24 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 190 487 1.9E-35 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:3.50.50.60 317 519 1.4E-29 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 Gene3D G3DSA:3.50.50.60 190 310 2.0E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF54292 1 96 6.58E-19 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 vfu_A02711 a5b2bacf65249eeee722bf29c087bb5b 618 SUPERFAMILY SSF46548 89 199 5.75E-17 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 Pfam PF00005 ABC transporter 18 184 1.6E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 SMART SM00382 26 238 4.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 SMART SM00382 344 512 9.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 Gene3D G3DSA:3.40.50.300 2 284 6.8E-57 T 12-10-2018 vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 Pfam PF12848 ABC transporter 224 309 6.0E-22 T 12-10-2018 IPR032781 ABC-transporter extension domain vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 SUPERFAMILY SSF52540 4 239 2.79E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 Pfam PF00005 ABC transporter 336 467 2.4E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 Gene3D G3DSA:3.40.50.300 285 528 7.6E-51 T 12-10-2018 vfu_A02290 4980915fdaa8d5f627b97d708262e5ab 531 SUPERFAMILY SSF52540 297 528 2.96E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 SUPERFAMILY SSF55347 131 284 5.49E-66 T 12-10-2018 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 8.7E-13 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 SMART SM00859 5 123 1.5E-12 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 SUPERFAMILY SSF51735 1 155 2.47E-29 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 131 284 2.8E-64 T 12-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 PIRSF PIRSF015689 1 311 4.6E-136 T 12-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 309 4.1E-142 T 12-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 Gene3D G3DSA:3.30.360.10 131 298 3.3E-133 T 12-10-2018 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 Gene3D G3DSA:3.40.50.720 5 305 3.3E-133 T 12-10-2018 vfu_A01972 7dc2da265ae2dd43923bd7cac418f33a 311 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 311 140.544 T 12-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.40.50.300 14 168 3.4E-57 T 12-10-2018 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF63867 517 594 6.67E-23 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 SMART SM00852 370 507 2.2E-41 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.40.980.10 365 516 2.5E-135 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 14 146 4.2E-47 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:3.90.105.10 217 364 2.5E-135 T 12-10-2018 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 PIRSF PIRSF036618 1 596 0.0 T 12-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA vfu_A01868 c950537c824509957134cfa9fb2878fd 596 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 443 476 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Pfam PF03454 MoeA C-terminal region (domain IV) 520 592 1.1E-20 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:2.40.340.10 517 587 2.5E-135 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:2.170.190.11 240 331 2.5E-135 T 12-10-2018 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Gene3D G3DSA:2.20.25.120 57 89 3.4E-57 T 12-10-2018 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 14 169 1.3E-42 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Pfam PF03453 MoeA N-terminal region (domain I and II) 198 357 2.1E-39 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 366 503 6.8E-32 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A01868 c950537c824509957134cfa9fb2878fd 596 Pfam PF00994 Probable molybdopterin binding domain 372 507 5.2E-27 T 12-10-2018 IPR001453 MoaB/Mog domain vfu_A01868 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF63882 195 366 2.62E-46 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 vfu_A01868 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF53218 367 513 1.28E-44 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily vfu_A01868 c950537c824509957134cfa9fb2878fd 596 SUPERFAMILY SSF52540 12 172 4.08E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 SUPERFAMILY SSF52374 1 281 1.77E-108 T 12-10-2018 vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 62 1.5E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 Gene3D G3DSA:3.30.1300.10 181 283 6.8E-27 T 12-10-2018 vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 Gene3D G3DSA:3.40.50.620 1 179 5.3E-81 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.17 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 3.0E-106 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 vfu_A00889 dc6ca1adfdac23852596345e3ab3fcb7 293 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.2E-101 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 vfu_A00414 8d8f928727debd6703f16679fc8c7eed 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.961 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 vfu_A00414 8d8f928727debd6703f16679fc8c7eed 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 3.9E-178 T 12-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 vfu_A00414 8d8f928727debd6703f16679fc8c7eed 544 Pfam PF03109 ABC1 family 112 230 1.4E-35 T 12-10-2018 IPR004147 UbiB domain vfu_A00414 8d8f928727debd6703f16679fc8c7eed 544 SUPERFAMILY SSF56112 94 436 7.53E-47 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_B00610 f3c09bfe5ca3a89caed9fbd3b143fcbc 281 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 36 224 3.7E-18 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_B00610 f3c09bfe5ca3a89caed9fbd3b143fcbc 281 Gene3D G3DSA:2.40.30.170 161 281 1.2E-26 T 12-10-2018 vfu_B00610 f3c09bfe5ca3a89caed9fbd3b143fcbc 281 SUPERFAMILY SSF111369 35 196 1.57E-26 T 12-10-2018 vfu_B00610 f3c09bfe5ca3a89caed9fbd3b143fcbc 281 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 228 2.5E-41 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 vfu_B00610 f3c09bfe5ca3a89caed9fbd3b143fcbc 281 Gene3D G3DSA:1.10.287.470 71 143 9.7E-13 T 12-10-2018 vfu_A02382 2235bf33be4060b2f9f1150bab7306a6 644 SMART SM00763 19 380 1.4E-216 T 12-10-2018 IPR013153 PrkA AAA domain vfu_A02382 2235bf33be4060b2f9f1150bab7306a6 644 PIRSF PIRSF000549 1 644 4.3E-287 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 vfu_A02382 2235bf33be4060b2f9f1150bab7306a6 644 SUPERFAMILY SSF52540 73 368 1.75E-17 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02382 2235bf33be4060b2f9f1150bab7306a6 644 Pfam PF08298 PrkA AAA domain 20 380 5.9E-174 T 12-10-2018 IPR013153 PrkA AAA domain vfu_A02382 2235bf33be4060b2f9f1150bab7306a6 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.2E-73 T 12-10-2018 IPR010650 PrkA C-terminal domain vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 Pfam PF03925 SeqA protein C-terminal domain 70 177 1.3E-45 T 12-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 SUPERFAMILY SSF82808 65 178 9.42E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 SUPERFAMILY SSF47598 1 34 7.78E-13 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 PIRSF PIRSF019401 1 179 1.9E-53 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 Gene3D G3DSA:1.10.1220.10 1 40 8.3E-23 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 41.044 T 12-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 Gene3D G3DSA:1.20.1380.10 64 179 9.7E-48 T 12-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 vfu_A01225 4bed416092baa25c1b3275545f3e1ec1 179 Pfam PF17206 SeqA protein N-terminal domain 1 36 7.8E-23 T 12-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal vfu_A01517 03e678e98c11bcbc630d2efae4ddec31 779 Pfam PF03176 MMPL family 169 420 3.4E-12 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 vfu_A01517 03e678e98c11bcbc630d2efae4ddec31 779 SUPERFAMILY SSF82866 221 405 1.44E-17 T 12-10-2018 vfu_A01517 03e678e98c11bcbc630d2efae4ddec31 779 SUPERFAMILY SSF82866 597 767 1.7E-22 T 12-10-2018 vfu_B00830 7a4e80ff4c10166cd3f325b6e5df6451 143 Gene3D G3DSA:3.40.630.30 1 143 3.0E-33 T 12-10-2018 vfu_B00830 7a4e80ff4c10166cd3f325b6e5df6451 143 Pfam PF13673 Acetyltransferase (GNAT) domain 57 126 7.9E-17 T 12-10-2018 IPR000182 GNAT domain vfu_B00830 7a4e80ff4c10166cd3f325b6e5df6451 143 SUPERFAMILY SSF55729 1 139 4.46E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 PIRSF PIRSF015626 3 275 2.7E-77 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 Gene3D G3DSA:3.40.140.10 125 278 1.9E-46 T 12-10-2018 vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 Pfam PF02634 FdhD/NarQ family 35 270 1.5E-71 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 271 3.1E-71 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 Gene3D G3DSA:3.10.20.10 37 123 2.2E-10 T 12-10-2018 vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 10 271 33.027 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A02050 b2caf2760b42ffa18e6e60b3dbb2d457 281 SUPERFAMILY SSF53927 16 270 3.31E-76 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A02188 6631b052a153ed3c48c1a40c85cf014e 127 Gene3D G3DSA:3.30.2130.10 1 126 4.1E-14 T 12-10-2018 vfu_A02188 6631b052a153ed3c48c1a40c85cf014e 127 SUPERFAMILY SSF55021 4 67 5.72E-6 T 12-10-2018 vfu_A02414 e16fe8e871ae7870b7b30b2fc71e13cd 396 Pfam PF13679 Methyltransferase domain 104 227 7.2E-17 T 12-10-2018 IPR025714 Methyltransferase domain vfu_A02414 e16fe8e871ae7870b7b30b2fc71e13cd 396 Gene3D G3DSA:3.40.50.150 100 275 5.2E-8 T 12-10-2018 vfu_A02414 e16fe8e871ae7870b7b30b2fc71e13cd 396 SUPERFAMILY SSF53335 114 181 1.13E-8 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02082 14f218350ef366dee2ed1722c245350b 406 Gene3D G3DSA:1.20.1250.20 4 387 6.7E-46 T 12-10-2018 vfu_A02082 14f218350ef366dee2ed1722c245350b 406 Pfam PF07690 Major Facilitator Superfamily 16 352 6.7E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02082 14f218350ef366dee2ed1722c245350b 406 SUPERFAMILY SSF103473 5 391 1.96E-53 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01657 c67d5ddb06079ef1b45a893c14aa7ed0 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 8.4E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01657 c67d5ddb06079ef1b45a893c14aa7ed0 295 SUPERFAMILY SSF161098 89 276 6.02E-25 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01657 c67d5ddb06079ef1b45a893c14aa7ed0 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 2.9E-10 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain vfu_A01657 c67d5ddb06079ef1b45a893c14aa7ed0 295 Gene3D G3DSA:1.10.3720.10 85 291 1.5E-21 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01423 f2cc3aa5e761339343167d7491b12e8f 309 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 12-10-2018 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|Reactome: R-HSA-77111|Reactome: R-HSA-9033241 vfu_B01423 f2cc3aa5e761339343167d7491b12e8f 309 Pfam PF00682 HMGL-like 7 275 4.0E-48 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 vfu_B01423 f2cc3aa5e761339343167d7491b12e8f 309 SUPERFAMILY SSF51569 2 291 3.37E-69 T 12-10-2018 vfu_B01423 f2cc3aa5e761339343167d7491b12e8f 309 Gene3D G3DSA:3.20.20.70 1 300 2.8E-127 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01393 088d960f0a2fe97807d1100e0ffbd801 270 Gene3D G3DSA:3.20.20.450 27 263 8.8E-9 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01393 088d960f0a2fe97807d1100e0ffbd801 270 SUPERFAMILY SSF141868 31 257 2.22E-8 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01393 088d960f0a2fe97807d1100e0ffbd801 270 Pfam PF00563 EAL domain 31 250 5.4E-8 T 12-10-2018 IPR001633 EAL domain vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Pfam PF00310 Glutamine amidotransferases class-II 21 443 9.4E-186 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:2.160.20.60 1239 1509 1.4E-109 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Pfam PF04898 Glutamate synthase central domain 472 756 9.0E-116 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 SUPERFAMILY SSF56235 21 447 1.05E-152 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Pfam PF01493 GXGXG motif 1267 1452 1.8E-82 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 SUPERFAMILY SSF69336 1235 1498 1.09E-95 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:3.20.20.70 498 1203 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Pfam PF01645 Conserved region in glutamate synthase 817 1187 2.7E-149 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A02906 4d77df6372fded3309699df0f489224f 1511 SUPERFAMILY SSF51395 461 1220 1.61E-267 T 12-10-2018 vfu_A01831 a531cfb4d20e50785ba4096b325c45d5 304 Gene3D G3DSA:2.115.10.20 97 302 1.8E-6 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_A01831 a531cfb4d20e50785ba4096b325c45d5 304 SUPERFAMILY SSF75005 48 272 2.36E-9 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_A01780 3ba3d44b39830a563c7ebba028bc4dae 180 Pfam PF07700 Haem-NO-binding 2 161 3.5E-39 T 12-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 vfu_A01780 3ba3d44b39830a563c7ebba028bc4dae 180 SUPERFAMILY SSF111126 1 176 1.52E-47 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily vfu_A01780 3ba3d44b39830a563c7ebba028bc4dae 180 Gene3D G3DSA:3.90.1520.10 1 180 3.6E-55 T 12-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 vfu_A01137 b3d0d55ebe509b607bc1896234ce958f 147 SUPERFAMILY SSF53178 5 109 1.44E-37 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 vfu_A01137 b3d0d55ebe509b607bc1896234ce958f 147 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 vfu_A01137 b3d0d55ebe509b607bc1896234ce958f 147 Gene3D G3DSA:3.40.50.1470 1 116 3.9E-40 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 vfu_A01137 b3d0d55ebe509b607bc1896234ce958f 147 Pfam PF01195 Peptidyl-tRNA hydrolase 7 109 2.2E-28 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 vfu_A02693 503223e37caebbfe9b78e168adb4f54b 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site vfu_A02693 503223e37caebbfe9b78e168adb4f54b 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 3.4E-22 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_A01002 22368d21c91b1417d96e482f4779e647 348 SUPERFAMILY SSF53850 23 341 1.93E-50 T 12-10-2018 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 Gene3D G3DSA:3.40.190.10 122 315 6.7E-56 T 12-10-2018 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 Pfam PF13416 Bacterial extracellular solute-binding protein 38 306 5.3E-20 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein vfu_A01002 22368d21c91b1417d96e482f4779e647 348 Gene3D G3DSA:3.40.190.10 26 310 6.7E-56 T 12-10-2018 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 27 43 1.5E-13 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 243 262 1.5E-13 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 177 1.5E-13 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 288 314 1.5E-13 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_A01002 22368d21c91b1417d96e482f4779e647 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 113 129 1.5E-13 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 vfu_B00344 05cd9047dc3aa9465f6cfa83f5221db8 225 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 61 168 9.7E-14 T 12-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted vfu_B00344 05cd9047dc3aa9465f6cfa83f5221db8 225 Gene3D G3DSA:3.10.620.30 26 216 2.0E-74 T 12-10-2018 vfu_A01746 2944518b7d101e67bdd23fe3320ef9b0 460 SUPERFAMILY SSF46626 318 460 9.17E-26 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01746 2944518b7d101e67bdd23fe3320ef9b0 460 Gene3D G3DSA:1.10.760.10 318 460 1.5E-11 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A01746 2944518b7d101e67bdd23fe3320ef9b0 460 PIRSF PIRSF028099 6 460 1.5E-185 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase vfu_A01746 2944518b7d101e67bdd23fe3320ef9b0 460 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 22 460 1.9E-141 T 12-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase vfu_A03081 b837676062ebcb68e9e7f65909f7bd0f 396 Pfam PF00348 Polyprenyl synthetase 105 346 2.8E-73 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 vfu_A03081 b837676062ebcb68e9e7f65909f7bd0f 396 Gene3D G3DSA:1.10.600.10 62 396 7.0E-120 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily vfu_A03081 b837676062ebcb68e9e7f65909f7bd0f 396 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 276 288 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site vfu_A03081 b837676062ebcb68e9e7f65909f7bd0f 396 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 154 168 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site vfu_A03081 b837676062ebcb68e9e7f65909f7bd0f 396 SUPERFAMILY SSF48576 75 395 2.56E-100 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily vfu_A01116 261c58c5e3c24bc369e92af7077f7713 107 SUPERFAMILY SSF101498 2 101 4.58E-20 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily vfu_A01116 261c58c5e3c24bc369e92af7077f7713 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 1.2E-17 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal vfu_A01116 261c58c5e3c24bc369e92af7077f7713 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 102 1.8E-23 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 vfu_B00568 15f8c2ec248e67a6a1f2b8bb0e12e136 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 1.0E-21 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_B00568 15f8c2ec248e67a6a1f2b8bb0e12e136 127 SUPERFAMILY SSF54593 1 126 2.95E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00568 15f8c2ec248e67a6a1f2b8bb0e12e136 127 Gene3D G3DSA:3.10.180.10 7 126 2.3E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A01125 2e3326a74423e6b6d481013433a956be 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 1.3E-33 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01125 2e3326a74423e6b6d481013433a956be 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.1E-5 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01125 2e3326a74423e6b6d481013433a956be 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 5.6E-22 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A01125 2e3326a74423e6b6d481013433a956be 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 4.2E-55 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 vfu_A01125 2e3326a74423e6b6d481013433a956be 249 SUPERFAMILY SSF117143 77 207 2.35E-17 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A00333 2570bb2b329cae96c13337ffa07db2ff 92 Gene3D G3DSA:3.30.70.1710 1 92 1.5E-37 T 12-10-2018 vfu_A00333 2570bb2b329cae96c13337ffa07db2ff 92 Pfam PF00936 BMC domain 4 79 6.8E-28 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00333 2570bb2b329cae96c13337ffa07db2ff 92 SMART SM00877 3 79 6.8E-35 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00333 2570bb2b329cae96c13337ffa07db2ff 92 SUPERFAMILY SSF143414 3 89 9.94E-31 T 12-10-2018 IPR037233 CcmK-like superfamily vfu_A00333 2570bb2b329cae96c13337ffa07db2ff 92 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 12-10-2018 IPR020808 Bacterial microcompartments protein, conserved site vfu_A00333 2570bb2b329cae96c13337ffa07db2ff 92 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 45 1.0E-16 T 12-10-2018 vfu_B01220 b25b946bd87b20f2f9834d2009ef6a9e 545 SUPERFAMILY SSF48208 216 483 5.33E-7 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 vfu_B01220 b25b946bd87b20f2f9834d2009ef6a9e 545 SUPERFAMILY SSF48208 60 108 6.38E-6 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 vfu_B01220 b25b946bd87b20f2f9834d2009ef6a9e 545 Gene3D G3DSA:1.50.10.20 355 509 3.5E-27 T 12-10-2018 vfu_B01220 b25b946bd87b20f2f9834d2009ef6a9e 545 Gene3D G3DSA:1.50.10.20 18 302 5.6E-89 T 12-10-2018 vfu_B01220 b25b946bd87b20f2f9834d2009ef6a9e 545 Pfam PF06917 Periplasmic pectate lyase 24 527 2.2E-119 T 12-10-2018 IPR010702 Periplasmic pectate lyase GO:0016837|GO:0042597|GO:0045490 vfu_A02624 6a901cc0b771c561d6f8b6d2a6b13af2 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.3E-16 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 vfu_A02624 6a901cc0b771c561d6f8b6d2a6b13af2 304 SUPERFAMILY SSF51735 1 301 4.14E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02624 6a901cc0b771c561d6f8b6d2a6b13af2 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 225 9.0E-23 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 vfu_A02624 6a901cc0b771c561d6f8b6d2a6b13af2 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 2.4E-102 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 vfu_A02624 6a901cc0b771c561d6f8b6d2a6b13af2 304 Gene3D G3DSA:3.40.50.720 2 303 9.8E-75 T 12-10-2018 vfu_A00354 9204c8818e62720fe6638718cf09e7e6 258 SUPERFAMILY SSF53850 2 256 3.01E-48 T 12-10-2018 vfu_A00354 9204c8818e62720fe6638718cf09e7e6 258 SMART SM00062 33 257 1.2E-36 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A00354 9204c8818e62720fe6638718cf09e7e6 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 254 3.5E-36 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A00354 9204c8818e62720fe6638718cf09e7e6 258 Gene3D G3DSA:3.40.190.10 25 244 5.3E-60 T 12-10-2018 vfu_A00354 9204c8818e62720fe6638718cf09e7e6 258 Gene3D G3DSA:3.40.190.10 120 211 5.3E-60 T 12-10-2018 vfu_A00354 9204c8818e62720fe6638718cf09e7e6 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site vfu_A00150 c0aedfb42401e0cad58f7274f3ed977d 638 Gene3D G3DSA:3.40.720.10 250 557 5.3E-34 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_A00150 c0aedfb42401e0cad58f7274f3ed977d 638 SUPERFAMILY SSF53649 253 561 1.42E-22 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A00150 c0aedfb42401e0cad58f7274f3ed977d 638 Pfam PF00884 Sulfatase 254 544 9.0E-22 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 vfu_B00102 1418960e177054aa25e4610bb8c93152 465 TIGRFAM TIGR00908 2A0305: ethanolamine permease 8 448 4.4E-190 T 12-10-2018 IPR004757 Ethanolamine permease vfu_B00102 1418960e177054aa25e4610bb8c93152 465 Pfam PF13520 Amino acid permease 17 419 3.0E-42 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B00102 1418960e177054aa25e4610bb8c93152 465 PIRSF PIRSF006060 1 455 3.2E-72 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B00102 1418960e177054aa25e4610bb8c93152 465 Gene3D G3DSA:1.20.1740.10 10 459 3.5E-59 T 12-10-2018 vfu_A00771 96fc53aaf6eae9edcae91e3de1e95ad4 58 Pfam PF12244 Protein of unknown function (DUF3606) 5 57 9.9E-22 T 12-10-2018 IPR022037 Protein of unknown function DUF3606 vfu_B01002 36da252d5a09ca5c89de0a79259507cd 200 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 20 199 3.2E-85 T 12-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 vfu_B01002 36da252d5a09ca5c89de0a79259507cd 200 Pfam PF00510 Cytochrome c oxidase subunit III 8 197 1.5E-18 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01002 36da252d5a09ca5c89de0a79259507cd 200 Gene3D G3DSA:1.20.120.80 14 199 5.6E-58 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B01002 36da252d5a09ca5c89de0a79259507cd 200 SUPERFAMILY SSF81452 6 197 5.76E-59 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A02915 0bf8ce2b2b9bf79c5a3d85a5a5d30209 137 SUPERFAMILY SSF54593 5 125 2.15E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A02915 0bf8ce2b2b9bf79c5a3d85a5a5d30209 137 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 111 3.5E-8 T 12-10-2018 vfu_A02915 0bf8ce2b2b9bf79c5a3d85a5a5d30209 137 Gene3D G3DSA:3.10.180.10 3 131 1.0E-18 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_B00829 b02705f50a7127db9fe1ebbc7c4cce46 159 SUPERFAMILY SSF55729 3 146 9.61E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00829 b02705f50a7127db9fe1ebbc7c4cce46 159 Gene3D G3DSA:3.40.630.30 1 156 9.4E-31 T 12-10-2018 vfu_B00829 b02705f50a7127db9fe1ebbc7c4cce46 159 Pfam PF00583 Acetyltransferase (GNAT) family 47 143 5.6E-15 T 12-10-2018 IPR000182 GNAT domain vfu_A00709 241429abd09f6eeda9311e039fbbbce8 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 3.6E-11 T 12-10-2018 IPR025857 MacB-like periplasmic core domain vfu_A00709 241429abd09f6eeda9311e039fbbbce8 419 Pfam PF02687 FtsX-like permease family 317 409 4.5E-11 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 vfu_A01097 deef3a4ada8101ddc6092a7cd922f72e 191 Gene3D G3DSA:3.40.50.10490 1 191 1.1E-71 T 12-10-2018 vfu_A01097 deef3a4ada8101ddc6092a7cd922f72e 191 SUPERFAMILY SSF53697 1 188 7.08E-52 T 12-10-2018 vfu_A01097 deef3a4ada8101ddc6092a7cd922f72e 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 2.2E-82 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 vfu_A01097 deef3a4ada8101ddc6092a7cd922f72e 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.03 T 12-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 vfu_A01097 deef3a4ada8101ddc6092a7cd922f72e 191 Pfam PF13580 SIS domain 25 146 7.9E-31 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 vfu_A00784 153de986bccb7006be3d9290f363846f 897 SUPERFAMILY SSF56672 360 599 3.34E-17 T 12-10-2018 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 172 184 2.8E-15 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 110 122 2.8E-15 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 2.8E-15 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 240 250 2.8E-15 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 50 59 2.8E-15 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 122 136 2.8E-15 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 227 239 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 179 194 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 Pfam PF00813 FliP family 54 246 4.0E-75 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 54 250 1.7E-76 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 91 110 7.0E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 71 91 7.0E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 221 7.0E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 52 71 7.0E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 224 249 7.0E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01398 3394e5e9d8ccc23f6d1eb14da5d8b733 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 179 199 7.0E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 SMART SM00357 6 70 8.0E-32 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 PIRSF PIRSF002599 1 70 1.0E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 PRINTS PR00050 Cold shock protein signature 7 22 8.9E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 PRINTS PR00050 Cold shock protein signature 43 61 8.9E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 PRINTS PR00050 Cold shock protein signature 28 37 8.9E-18 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 Gene3D G3DSA:2.40.50.140 2 69 2.0E-30 T 12-10-2018 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.0E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 vfu_A01690 25cf9f0c8affe690ee47d903aae9a7fb 70 SUPERFAMILY SSF50249 3 69 8.14E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold vfu_A00926 f549a013dd1a19e8dfb6ee66841764d8 122 Pfam PF04304 Protein of unknown function (DUF454) 1 110 9.0E-30 T 12-10-2018 IPR007401 Protein of unknown function DUF454 vfu_A00926 f549a013dd1a19e8dfb6ee66841764d8 122 PIRSF PIRSF016789 1 115 7.6E-30 T 12-10-2018 IPR007401 Protein of unknown function DUF454 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.9E-58 T 12-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 Gene3D G3DSA:2.60.300.12 2 107 2.3E-39 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.7E-38 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 2.8E-27 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 1.9E-41 T 12-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 vfu_A02785 83dded792e5338205399d9b27b0a11d8 107 SUPERFAMILY SSF89360 1 96 1.7E-34 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 vfu_A01432 e9bcffcc319b070c6fca1b201fadcd85 186 Gene3D G3DSA:2.60.40.420 65 186 2.9E-20 T 12-10-2018 IPR008972 Cupredoxin vfu_A01432 e9bcffcc319b070c6fca1b201fadcd85 186 SUPERFAMILY SSF49503 76 186 9.33E-22 T 12-10-2018 IPR008972 Cupredoxin vfu_A00220 d78c96a26aa6faa6e4efe57727309c4c 305 SUPERFAMILY SSF103481 192 290 1.96E-7 T 12-10-2018 vfu_A00220 d78c96a26aa6faa6e4efe57727309c4c 305 Pfam PF00892 EamA-like transporter family 11 145 4.3E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A00220 d78c96a26aa6faa6e4efe57727309c4c 305 TIGRFAM TIGR00688 rarD: protein RarD 10 264 2.3E-84 T 12-10-2018 IPR004626 RarD protein GO:0005887 vfu_A00220 d78c96a26aa6faa6e4efe57727309c4c 305 SUPERFAMILY SSF103481 48 145 9.02E-13 T 12-10-2018 vfu_A02549 532e6ca85f2934d1d96c8460a2f65e86 367 SUPERFAMILY SSF52172 21 137 2.7E-32 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02549 532e6ca85f2934d1d96c8460a2f65e86 367 Pfam PF00072 Response regulator receiver domain 22 125 2.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02549 532e6ca85f2934d1d96c8460a2f65e86 367 SMART SM00448 20 132 6.4E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02549 532e6ca85f2934d1d96c8460a2f65e86 367 Gene3D G3DSA:3.60.40.10 165 322 8.4E-7 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 vfu_A02549 532e6ca85f2934d1d96c8460a2f65e86 367 Gene3D G3DSA:3.40.50.2300 12 149 2.5E-32 T 12-10-2018 vfu_A01335 41bb9c4fd7544b76ca29049791e19dac 442 Pfam PF01966 HD domain 62 143 2.0E-6 T 12-10-2018 IPR006674 HD domain vfu_A01335 41bb9c4fd7544b76ca29049791e19dac 442 SMART SM00471 58 264 3.3E-7 T 12-10-2018 IPR003607 HD/PDEase domain vfu_A01335 41bb9c4fd7544b76ca29049791e19dac 442 SUPERFAMILY SSF109604 23 439 3.14E-81 T 12-10-2018 vfu_A01335 41bb9c4fd7544b76ca29049791e19dac 442 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 436 34.276 T 12-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 vfu_A01335 41bb9c4fd7544b76ca29049791e19dac 442 Pfam PF13286 Phosphohydrolase-associated domain 343 434 9.6E-29 T 12-10-2018 IPR026875 Phosphohydrolase-associated domain vfu_A01335 41bb9c4fd7544b76ca29049791e19dac 442 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 437 9.4E-132 T 12-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 vfu_B00148 b4a03dc34238635821ba3daec166ae3c 180 Pfam PF11810 Domain of unknown function (DUF3332) 6 174 9.8E-46 T 12-10-2018 IPR021768 Protein of unknown function DUF3332 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 1.6E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 1.6E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 1.6E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 1.6E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 1.6E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 1.6E-65 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 Pfam PF00813 FliP family 102 293 7.6E-80 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 4.0E-84 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 2.1E-19 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 2.1E-19 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 2.1E-19 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 2.1E-19 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 2.1E-19 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 2.1E-19 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 vfu_A01200 5be550e3dde17661a8f58a72c3f63d1a 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 vfu_A02001 ced0f385bcd337a8de3016219349e0d4 355 Gene3D G3DSA:1.10.3820.10 1 173 2.3E-34 T 12-10-2018 IPR038266 NapC/NirT cytochrome c superfamily vfu_A02001 ced0f385bcd337a8de3016219349e0d4 355 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 2 166 6.6E-66 T 12-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal vfu_A02001 ced0f385bcd337a8de3016219349e0d4 355 SUPERFAMILY SSF48695 4 171 1.64E-48 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily vfu_A02001 ced0f385bcd337a8de3016219349e0d4 355 PIRSF PIRSF000014 1 355 1.8E-143 T 12-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 vfu_A02446 0a23e4effecae9da5718134301375a81 159 SUPERFAMILY SSF56524 32 157 1.44E-11 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 vfu_B00037 c97ba0ef693b80cf8fa7039384149a35 239 Gene3D G3DSA:3.40.190.10 62 196 6.9E-79 T 12-10-2018 vfu_B00037 c97ba0ef693b80cf8fa7039384149a35 239 Pfam PF12727 PBP superfamily domain 5 218 3.1E-38 T 12-10-2018 IPR024370 PBP domain vfu_B00037 c97ba0ef693b80cf8fa7039384149a35 239 SUPERFAMILY SSF53850 1 235 5.12E-59 T 12-10-2018 vfu_B00037 c97ba0ef693b80cf8fa7039384149a35 239 Gene3D G3DSA:3.40.190.10 3 234 6.9E-79 T 12-10-2018 vfu_B00931 18b5284c9f33f9dcdda1a2dded0abf3a 143 Pfam PF03733 Inner membrane component domain 4 54 7.2E-14 T 12-10-2018 IPR005185 Inner membrane component domain vfu_B00931 18b5284c9f33f9dcdda1a2dded0abf3a 143 Pfam PF03733 Inner membrane component domain 76 126 4.3E-18 T 12-10-2018 IPR005185 Inner membrane component domain vfu_B00931 18b5284c9f33f9dcdda1a2dded0abf3a 143 PIRSF PIRSF028777 1 138 1.9E-52 T 12-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 Pfam PF01297 Zinc-uptake complex component A periplasmic 11 261 9.9E-53 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 Gene3D G3DSA:3.40.50.1980 154 266 1.4E-39 T 12-10-2018 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 Gene3D G3DSA:3.40.50.1980 1 152 6.1E-42 T 12-10-2018 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 SUPERFAMILY SSF53807 3 266 5.89E-68 T 12-10-2018 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00691 Adhesin B signature 33 52 4.7E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00691 Adhesin B signature 96 115 4.7E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00691 Adhesin B signature 14 32 4.7E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00691 Adhesin B signature 253 268 4.7E-6 T 12-10-2018 IPR006129 Adhesin B GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00690 Adhesin family signature 20 33 3.0E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00690 Adhesin family signature 33 50 3.0E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00690 Adhesin family signature 152 173 3.0E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 vfu_A01240 4b2584803133b8449338f638d5c5cb2f 268 PRINTS PR00690 Adhesin family signature 205 223 3.0E-5 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 83 166 9.0E-27 T 12-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:3.30.1950.10 89 170 2.3E-120 T 12-10-2018 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Pfam PF10531 SLBB domain 257 304 1.4E-5 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Pfam PF10531 SLBB domain 174 222 2.6E-9 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:3.10.560.10 55 342 2.3E-120 T 12-10-2018 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:1.20.5.70 345 378 2.2E-20 T 12-10-2018 vfu_A00128 c6f7cd76d85eae9401f29a2cd7b8175f 378 Gene3D G3DSA:3.10.560.10 66 255 2.3E-120 T 12-10-2018 vfu_B00624 41ceb18359233d35cbf090cce087163c 368 Gene3D G3DSA:1.10.3720.10 140 329 3.6E-36 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00624 41ceb18359233d35cbf090cce087163c 368 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 164 324 3.2E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00624 41ceb18359233d35cbf090cce087163c 368 SUPERFAMILY SSF161098 143 325 1.83E-41 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 Gene3D G3DSA:1.10.10.10 1 86 1.2E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.8E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 3.6E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 SUPERFAMILY SSF53850 92 322 6.95E-39 T 12-10-2018 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 Pfam PF03466 LysR substrate binding domain 92 292 7.2E-38 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 Gene3D G3DSA:3.40.190.10 167 267 1.4E-93 T 12-10-2018 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 Gene3D G3DSA:3.40.190.10 93 303 1.4E-93 T 12-10-2018 vfu_A02415 47885d0c92393a6fbe015af98e64cd00 324 SUPERFAMILY SSF46785 1 87 2.33E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 Gene3D G3DSA:3.30.540.10 7 160 3.4E-45 T 12-10-2018 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.615 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 2.4E-14 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 2.4E-14 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.4E-14 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 2.4E-14 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 2.4E-14 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 6.9E-108 T 12-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 SUPERFAMILY SSF56655 6 272 1.44E-77 T 12-10-2018 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 Pfam PF00459 Inositol monophosphatase family 14 253 9.8E-51 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 vfu_A00522 cf5a0d14ba34a6aa53948a72e4753f55 275 Gene3D G3DSA:3.40.190.80 162 264 2.5E-26 T 12-10-2018 vfu_B01005 39aee1758d6e230b37dfd5efac13383b 118 Pfam PF10928 Protein of unknown function (DUF2810) 64 116 4.7E-31 T 12-10-2018 IPR021230 Protein of unknown function DUF2810 vfu_B01005 39aee1758d6e230b37dfd5efac13383b 118 Gene3D G3DSA:3.30.1370.150 59 118 1.6E-31 T 12-10-2018 vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.4E-15 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 Pfam PF03466 LysR substrate binding domain 104 312 1.6E-14 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:1.10.10.10 1 89 4.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 SUPERFAMILY SSF46785 6 87 3.18E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:3.40.190.10 180 281 4.1E-28 T 12-10-2018 vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 Gene3D G3DSA:3.40.190.10 98 310 4.1E-28 T 12-10-2018 vfu_A01287 9d52b187627a1bdfb103770644c359c1 320 SUPERFAMILY SSF53850 98 314 3.1E-25 T 12-10-2018 vfu_A02836 cc2de6db8531e0f6aeeacac2900d75a8 322 Pfam PF03595 Voltage-dependent anion channel 19 308 1.6E-28 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 vfu_A02836 cc2de6db8531e0f6aeeacac2900d75a8 322 Gene3D G3DSA:1.50.10.150 5 313 2.9E-45 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily vfu_B00662 80a19d9b7b540952f4cd88e17855714d 223 SUPERFAMILY SSF161111 2 136 7.85E-18 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily vfu_B00662 80a19d9b7b540952f4cd88e17855714d 223 Gene3D G3DSA:1.20.1510.10 2 138 1.5E-10 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily vfu_B00662 80a19d9b7b540952f4cd88e17855714d 223 Pfam PF01545 Cation efflux family 3 137 2.0E-19 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 vfu_A00401 2976bd3628037a23928e33fc48412f6c 333 SUPERFAMILY SSF53822 33 331 1.31E-65 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A00401 2976bd3628037a23928e33fc48412f6c 333 Gene3D G3DSA:3.40.50.2300 34 315 1.8E-125 T 12-10-2018 vfu_A00401 2976bd3628037a23928e33fc48412f6c 333 PIRSF PIRSF002816 1 333 4.9E-148 T 12-10-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 vfu_A00401 2976bd3628037a23928e33fc48412f6c 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 32 327 2.0E-76 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain vfu_A00401 2976bd3628037a23928e33fc48412f6c 333 Gene3D G3DSA:3.40.50.2300 139 324 1.8E-125 T 12-10-2018 vfu_A01582 2817edbf632a7d9c87ff28af6c87ac41 175 Pfam PF12915 Protein of unknown function (DUF3833) 14 174 9.3E-66 T 12-10-2018 IPR024409 Protein of unknown function DUF3833 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 Pfam PF00248 Aldo/keto reductase family 6 250 2.2E-48 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 PIRSF PIRSF000097 1 266 7.0E-70 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 Gene3D G3DSA:3.20.20.100 1 266 2.7E-92 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.2E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 vfu_B01151 f7f8c9a77e4780315a8aa5a404cc22d5 266 SUPERFAMILY SSF51430 2 261 1.96E-83 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily vfu_A00589 7409589630dbb9459f86abd9c68d1a20 185 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.972 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 vfu_A00589 7409589630dbb9459f86abd9c68d1a20 185 PIRSF PIRSF039093 1 174 1.2E-86 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 vfu_A00589 7409589630dbb9459f86abd9c68d1a20 185 Gene3D G3DSA:3.60.20.10 1 173 9.9E-68 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A00589 7409589630dbb9459f86abd9c68d1a20 185 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 1.2E-86 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 vfu_A00589 7409589630dbb9459f86abd9c68d1a20 185 Pfam PF00227 Proteasome subunit 2 169 2.1E-23 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 vfu_A00589 7409589630dbb9459f86abd9c68d1a20 185 SUPERFAMILY SSF56235 2 172 1.49E-57 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_B00817 b3f42c321e277c9ed59f184be93360cc 277 Pfam PF03618 Kinase/pyrophosphorylase 10 267 7.4E-74 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 vfu_B00817 b3f42c321e277c9ed59f184be93360cc 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 7 276 68.301 T 12-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 280 298 2.9E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 133 151 2.9E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 165 179 2.9E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 209 227 2.9E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PRINTS PR01009 Flagellar M-ring protein signature 350 374 2.9E-27 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 PIRSF PIRSF004862 14 568 3.3E-121 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 Pfam PF08345 Flagellar M-ring protein C-terminal 267 419 5.7E-39 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 Gene3D G3DSA:3.30.300.30 134 231 8.3E-14 T 12-10-2018 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 26 567 8.9E-83 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 vfu_A02251 54aad3c6eb7f4efd7a0df2fc5253d46d 568 Pfam PF01514 Secretory protein of YscJ/FliF family 43 233 4.6E-63 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF vfu_B00901 227209e3f6b9db043e8b380157051a16 184 SUPERFAMILY SSF53098 2 155 1.14E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_B00901 227209e3f6b9db043e8b380157051a16 184 SMART SM00479 2 153 1.6E-18 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_B00901 227209e3f6b9db043e8b380157051a16 184 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 151 1.7E-23 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_B00901 227209e3f6b9db043e8b380157051a16 184 Pfam PF00929 Exonuclease 2 143 6.8E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_B00901 227209e3f6b9db043e8b380157051a16 184 Gene3D G3DSA:3.30.420.10 1 155 1.6E-39 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A00759 00eea12853f68e80b5b678082ec2667a 244 Gene3D G3DSA:3.90.740.10 175 213 9.0E-82 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 vfu_A00759 00eea12853f68e80b5b678082ec2667a 244 SUPERFAMILY SSF52374 1 223 9.7E-64 T 12-10-2018 vfu_A00759 00eea12853f68e80b5b678082ec2667a 244 Gene3D G3DSA:3.40.50.620 21 174 9.0E-82 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00759 00eea12853f68e80b5b678082ec2667a 244 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 216 3.3E-85 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00759 00eea12853f68e80b5b678082ec2667a 244 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 vfu_A00759 00eea12853f68e80b5b678082ec2667a 244 Gene3D G3DSA:1.10.730.10 1 20 9.0E-82 T 12-10-2018 vfu_A02106 edcf86f6bf0c301dfe8491b63c0019f8 331 Gene3D G3DSA:1.10.3470.10 4 328 2.6E-94 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A02106 edcf86f6bf0c301dfe8491b63c0019f8 331 Pfam PF01032 FecCD transport family 21 326 1.8E-81 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_A02106 edcf86f6bf0c301dfe8491b63c0019f8 331 SUPERFAMILY SSF81345 7 326 1.23E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A02106 edcf86f6bf0c301dfe8491b63c0019f8 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 30.22 T 12-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 vfu_B00978 27f4782a1c36546a3b9358c210deeb05 201 Pfam PF03975 CheD chemotactic sensory transduction 69 166 1.0E-29 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 vfu_B00978 27f4782a1c36546a3b9358c210deeb05 201 Gene3D G3DSA:3.30.1330.200 15 177 9.1E-47 T 12-10-2018 IPR038592 CheD-like superfamily vfu_B00978 27f4782a1c36546a3b9358c210deeb05 201 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 11 170 28.08 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 vfu_B00978 27f4782a1c36546a3b9358c210deeb05 201 SUPERFAMILY SSF64438 15 171 2.38E-46 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 SUPERFAMILY SSF46785 7 90 4.13E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 2.7E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 Pfam PF03466 LysR substrate binding domain 90 294 2.0E-50 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.7E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 Gene3D G3DSA:3.40.190.10 165 265 3.0E-71 T 12-10-2018 vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 SUPERFAMILY SSF53850 90 296 5.97E-54 T 12-10-2018 vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 Gene3D G3DSA:1.10.10.10 5 93 5.4E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00110 90be581ec5e8d18d6edd9ed6426030b0 306 Gene3D G3DSA:3.40.190.10 94 291 3.0E-71 T 12-10-2018 vfu_A01618 6b867b5e75d68d93b494044a60d8811d 269 SUPERFAMILY SSF53474 10 262 1.29E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01618 6b867b5e75d68d93b494044a60d8811d 269 Gene3D G3DSA:3.40.50.1820 8 265 6.5E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01618 6b867b5e75d68d93b494044a60d8811d 269 PRINTS PR00412 Epoxide hydrolase signature 24 42 4.3E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A01618 6b867b5e75d68d93b494044a60d8811d 269 PRINTS PR00412 Epoxide hydrolase signature 205 221 4.3E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A01618 6b867b5e75d68d93b494044a60d8811d 269 PRINTS PR00412 Epoxide hydrolase signature 237 259 4.3E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 vfu_A01618 6b867b5e75d68d93b494044a60d8811d 269 Pfam PF00561 alpha/beta hydrolase fold 19 121 1.3E-20 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 Pfam PF17200 Single Cache domain 2 51 194 1.5E-38 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 SUPERFAMILY SSF58104 250 559 1.96E-73 T 12-10-2018 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 Pfam PF00672 HAMP domain 229 278 2.0E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 SMART SM00304 228 282 6.4E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 SMART SM01049 46 135 9.1E-33 T 12-10-2018 IPR033480 Single Cache domain 2 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 525 9.0E-40 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 SMART SM00283 301 558 1.2E-54 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 Gene3D G3DSA:1.10.287.950 229 559 2.6E-71 T 12-10-2018 vfu_A00157 17d9e07df2aba83971e112f73bdcbead 559 Gene3D G3DSA:3.30.450.20 40 185 3.5E-52 T 12-10-2018 vfu_A01477 7979a2635e7e643b0d0a480952586c7d 312 Pfam PF01497 Periplasmic binding protein 46 285 4.5E-19 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain vfu_A01477 7979a2635e7e643b0d0a480952586c7d 312 Gene3D G3DSA:3.40.50.1980 137 311 3.8E-59 T 12-10-2018 vfu_A01477 7979a2635e7e643b0d0a480952586c7d 312 Gene3D G3DSA:3.40.50.1980 22 136 1.0E-25 T 12-10-2018 vfu_A01477 7979a2635e7e643b0d0a480952586c7d 312 SUPERFAMILY SSF53807 27 290 2.75E-37 T 12-10-2018 vfu_A02108 a62990883fbec8a5de2340ffa56d16cf 216 SUPERFAMILY SSF53254 13 206 5.78E-31 T 12-10-2018 IPR029033 Histidine phosphatase superfamily vfu_A02108 a62990883fbec8a5de2340ffa56d16cf 216 SMART SM00855 15 163 4.2E-11 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 vfu_A02108 a62990883fbec8a5de2340ffa56d16cf 216 Gene3D G3DSA:3.40.50.1240 11 215 2.0E-44 T 12-10-2018 IPR029033 Histidine phosphatase superfamily vfu_A02108 a62990883fbec8a5de2340ffa56d16cf 216 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 193 1.6E-29 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Gene3D G3DSA:3.90.1150.10 4 336 9.3E-122 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Pfam PF00155 Aminotransferase class I and II 41 339 4.4E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 SUPERFAMILY SSF53383 10 344 4.4E-75 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Gene3D G3DSA:3.40.640.10 49 253 9.3E-122 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.975 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 vfu_A01593 cf3991bcdd4fc80c4f12d1dda21ce4e9 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.3E-120 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 vfu_A02935 4e61a303fd0e7216f78dc31c54a723af 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02935 4e61a303fd0e7216f78dc31c54a723af 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02935 4e61a303fd0e7216f78dc31c54a723af 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.458 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02935 4e61a303fd0e7216f78dc31c54a723af 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02935 4e61a303fd0e7216f78dc31c54a723af 360 Pfam PF00953 Glycosyl transferase family 4 99 283 9.4E-37 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 vfu_A02935 4e61a303fd0e7216f78dc31c54a723af 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 1.0E-156 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02518 98413955dd43de97394f0a69f5a9d978 607 Pfam PF17289 Terminase RNaseH-like domain 424 583 4.0E-41 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like vfu_A02518 98413955dd43de97394f0a69f5a9d978 607 Pfam PF03237 Terminase-like family 176 397 7.7E-63 T 12-10-2018 IPR004921 Terminase large subunit, T4likevirus-type vfu_A02518 98413955dd43de97394f0a69f5a9d978 607 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 6 64 2.5E-22 T 12-10-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 vfu_A02518 98413955dd43de97394f0a69f5a9d978 607 Gene3D G3DSA:3.30.420.240 407 583 1.5E-9 T 12-10-2018 vfu_A02518 98413955dd43de97394f0a69f5a9d978 607 Gene3D G3DSA:3.40.50.300 102 317 9.5E-23 T 12-10-2018 vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 12-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 SUPERFAMILY SSF52540 8 643 1.72E-178 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 3.2E-78 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:1.10.486.10 383 539 2.2E-133 T 12-10-2018 vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:1.10.10.160 115 188 6.2E-98 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:3.40.50.300 282 637 2.2E-133 T 12-10-2018 vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 Gene3D G3DSA:3.40.50.300 11 274 6.2E-98 T 12-10-2018 vfu_A00224 d4da3cf850825596b36e22c70e8fc164 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 1.2E-74 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 vfu_B00557 5761db15a1dbbd9492ba02770dacec27 127 Pfam PF06476 Protein of unknown function (DUF1090) 12 120 3.4E-35 T 12-10-2018 IPR009468 Protein of unknown function DUF1090 vfu_A01443 a12b1402ff5c8098a5c9a9c9ab958312 124 Gene3D G3DSA:1.10.3830.10 7 124 3.1E-33 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 vfu_A01443 a12b1402ff5c8098a5c9a9c9ab958312 124 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 vfu_A01443 a12b1402ff5c8098a5c9a9c9ab958312 124 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 9.7E-30 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 Gene3D G3DSA:1.10.150.130 14 107 8.1E-18 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 17 305 2.2E-108 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 303 54.845 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 SUPERFAMILY SSF56349 15 297 2.47E-52 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 Pfam PF00589 Phage integrase family 121 289 2.5E-47 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 99 1.3E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 vfu_A00441 49adc25b367d771f275d1eeeebb02d74 309 Gene3D G3DSA:1.10.443.10 120 297 1.4E-56 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_A02863 aac8e8b86359049167fba83c29cd8a44 449 SMART SM00382 172 363 0.0099 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02863 aac8e8b86359049167fba83c29cd8a44 449 SUPERFAMILY SSF52540 153 434 1.12E-18 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00908 5fef67666153c31909022d14988ab885 142 SUPERFAMILY SSF82784 5 133 3.66E-19 T 12-10-2018 IPR036102 OsmC/Ohr superfamily vfu_B00908 5fef67666153c31909022d14988ab885 142 Pfam PF02566 OsmC-like protein 40 133 1.2E-11 T 12-10-2018 IPR003718 OsmC/Ohr family vfu_B00908 5fef67666153c31909022d14988ab885 142 Gene3D G3DSA:3.30.300.20 3 138 2.2E-19 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 SUPERFAMILY SSF52283 4 139 2.98E-30 T 12-10-2018 vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 Gene3D G3DSA:3.40.50.720 99 288 3.2E-110 T 12-10-2018 vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 Gene3D G3DSA:3.40.50.720 26 317 3.2E-110 T 12-10-2018 vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 SUPERFAMILY SSF51735 103 290 1.54E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 36 319 1.4E-23 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 vfu_A00756 2a127f9cc59cac8930b1259e4abbffd6 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 2.0E-52 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_A02816 355636288b083a26ae2f42e3f640601f 84 SUPERFAMILY SSF54862 5 72 4.89E-17 T 12-10-2018 vfu_A02816 355636288b083a26ae2f42e3f640601f 84 Gene3D G3DSA:3.30.70.20 2 83 1.3E-33 T 12-10-2018 vfu_A02816 355636288b083a26ae2f42e3f640601f 84 Pfam PF00037 4Fe-4S binding domain 6 25 3.0E-6 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain vfu_A02816 355636288b083a26ae2f42e3f640601f 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 Pfam PF02080 TrkA-C domain 294 355 1.7E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 Gene3D G3DSA:3.30.70.1450 195 273 1.8E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 SUPERFAMILY SSF116726 201 271 6.15E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 552 54.591 T 12-10-2018 IPR023018 Transport protein YidE, putative vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 1.1E-37 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 1.2E-48 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 SUPERFAMILY SSF116726 282 358 5.23E-13 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 Gene3D G3DSA:3.30.70.1450 288 364 4.7E-11 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 Pfam PF06826 Predicted Permease Membrane Region 374 546 9.3E-48 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_B01346 35ae92da272d20ce691006cde32f3da5 552 Pfam PF06826 Predicted Permease Membrane Region 11 179 3.9E-43 T 12-10-2018 IPR006512 YidE/YbjL duplication vfu_B00851 940e20b2ce2afa5e8313c5030fc03242 257 Gene3D G3DSA:3.40.190.10 26 247 6.1E-71 T 12-10-2018 vfu_B00851 940e20b2ce2afa5e8313c5030fc03242 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 249 1.7E-58 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00851 940e20b2ce2afa5e8313c5030fc03242 257 SMART SM00062 23 251 3.7E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00851 940e20b2ce2afa5e8313c5030fc03242 257 Gene3D G3DSA:3.40.190.10 109 208 6.1E-71 T 12-10-2018 vfu_B00851 940e20b2ce2afa5e8313c5030fc03242 257 SUPERFAMILY SSF53850 1 252 7.24E-62 T 12-10-2018 vfu_B00851 940e20b2ce2afa5e8313c5030fc03242 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site vfu_B01080 e04f16f8304884882f74a95130e49eb4 409 Pfam PF04225 Opacity-associated protein A LysM-like domain 45 127 4.2E-6 T 12-10-2018 IPR007340 Opacity-associated protein A vfu_B01080 e04f16f8304884882f74a95130e49eb4 409 Pfam PF01551 Peptidase family M23 267 360 5.6E-32 T 12-10-2018 IPR016047 Peptidase M23 vfu_B01080 e04f16f8304884882f74a95130e49eb4 409 Gene3D G3DSA:2.70.70.10 237 367 3.4E-49 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_B01080 e04f16f8304884882f74a95130e49eb4 409 SUPERFAMILY SSF51261 116 362 9.42E-69 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_B01080 e04f16f8304884882f74a95130e49eb4 409 Gene3D G3DSA:3.10.450.350 39 131 2.7E-32 T 12-10-2018 vfu_B01080 e04f16f8304884882f74a95130e49eb4 409 Gene3D G3DSA:3.10.450.350 132 236 2.4E-34 T 12-10-2018 vfu_B01404 ee39f1184c7d6fc376d8ac67d5e35ab2 349 Pfam PF00756 Putative esterase 32 178 1.6E-19 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 vfu_B01404 ee39f1184c7d6fc376d8ac67d5e35ab2 349 Gene3D G3DSA:3.40.50.1820 20 343 1.2E-77 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B01404 ee39f1184c7d6fc376d8ac67d5e35ab2 349 SUPERFAMILY SSF53474 18 278 2.4E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02386 71f97ed0683ddcb551025a02ff535162 59 Pfam PF03966 Trm112p-like protein 2 41 2.0E-11 T 12-10-2018 IPR005651 Trm112-like vfu_A02386 71f97ed0683ddcb551025a02ff535162 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.867 T 12-10-2018 IPR038053 Uncharacterised protein family UPF0434 vfu_A02386 71f97ed0683ddcb551025a02ff535162 59 SUPERFAMILY SSF158997 1 54 7.72E-21 T 12-10-2018 vfu_A02386 71f97ed0683ddcb551025a02ff535162 59 Gene3D G3DSA:2.20.25.10 8 59 6.8E-25 T 12-10-2018 vfu_A01063 cbc25ebd03a753dfd6ffa0ef69e47615 156 SUPERFAMILY SSF48013 7 153 6.67E-39 T 12-10-2018 IPR035926 NusB-like superfamily vfu_A01063 cbc25ebd03a753dfd6ffa0ef69e47615 156 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.864 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 vfu_A01063 cbc25ebd03a753dfd6ffa0ef69e47615 156 Pfam PF01029 NusB family 11 149 3.3E-35 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 vfu_A01063 cbc25ebd03a753dfd6ffa0ef69e47615 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 9.5E-42 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 vfu_A01063 cbc25ebd03a753dfd6ffa0ef69e47615 156 Gene3D G3DSA:1.10.940.10 3 156 2.4E-47 T 12-10-2018 IPR035926 NusB-like superfamily vfu_A00255 5b98e8cd890fb208954e74b3f956dd12 86 SUPERFAMILY SSF48179 1 79 3.4E-18 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_A00255 5b98e8cd890fb208954e74b3f956dd12 86 Gene3D G3DSA:1.10.1040.10 1 86 1.7E-20 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_A01071 ccab01d2e80fa74abe7d995a1c90163e 243 SUPERFAMILY SSF53633 7 240 1.06E-71 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A01071 ccab01d2e80fa74abe7d995a1c90163e 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.054 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 vfu_A01071 ccab01d2e80fa74abe7d995a1c90163e 243 Pfam PF00696 Amino acid kinase family 11 219 2.2E-26 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A01071 ccab01d2e80fa74abe7d995a1c90163e 243 Gene3D G3DSA:3.40.1160.10 3 242 5.6E-75 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A01071 ccab01d2e80fa74abe7d995a1c90163e 243 PIRSF PIRSF005650 4 243 5.6E-89 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 vfu_A01071 ccab01d2e80fa74abe7d995a1c90163e 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.9E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 vfu_A00123 dcaeaafffee0c91a87c2b98548784d45 330 Pfam PF14897 EpsG family 30 322 4.6E-13 T 12-10-2018 vfu_A01123 9264c40cae31fa44d66290b502f6d78d 235 Gene3D G3DSA:2.60.40.4070 110 196 7.5E-36 T 12-10-2018 vfu_A01123 9264c40cae31fa44d66290b502f6d78d 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 21 84 6.5E-22 T 12-10-2018 IPR005648 Flagellar hook capping protein vfu_A01123 9264c40cae31fa44d66290b502f6d78d 235 Pfam PF13861 FlgD Tudor-like domain 93 229 2.1E-14 T 12-10-2018 IPR025963 FlgD Tudor-like domain vfu_A01123 9264c40cae31fa44d66290b502f6d78d 235 Pfam PF13860 FlgD Ig-like domain 121 184 2.7E-19 T 12-10-2018 IPR025965 FlgD Ig-like domain vfu_A01123 9264c40cae31fa44d66290b502f6d78d 235 Gene3D G3DSA:2.30.30.910 98 222 7.5E-36 T 12-10-2018 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 SUPERFAMILY SSF53067 246 478 3.89E-33 T 12-10-2018 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 SUPERFAMILY SSF53067 4 242 1.23E-41 T 12-10-2018 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 241 1.5E-26 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 6 456 2.5E-178 T 12-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 Gene3D G3DSA:3.30.420.40 234 479 2.9E-91 T 12-10-2018 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 250 436 5.7E-28 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 vfu_B01236 287aefbf7fbefc3693308abeb08326d0 480 Gene3D G3DSA:3.30.420.40 1 233 1.8E-77 T 12-10-2018 vfu_A01710 3d86f0a5904860e8c7d1450791cbaec2 129 Gene3D G3DSA:3.10.450.40 65 119 2.8E-7 T 12-10-2018 vfu_B01181 80c3b77fe756ffcbf41b2c3f71484467 495 Pfam PF00498 FHA domain 36 102 2.5E-6 T 12-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 vfu_B01181 80c3b77fe756ffcbf41b2c3f71484467 495 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 9 489 3.4E-77 T 12-10-2018 IPR017735 Type VI secretion system, FHA domain-containing protein vfu_B01181 80c3b77fe756ffcbf41b2c3f71484467 495 SUPERFAMILY SSF49879 29 113 4.07E-8 T 12-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 vfu_B01181 80c3b77fe756ffcbf41b2c3f71484467 495 Gene3D G3DSA:2.60.200.20 6 120 7.0E-7 T 12-10-2018 vfu_A01832 fabec51a07dfd544f07cf6f3af97508c 189 Pfam PF09335 SNARE associated Golgi protein 23 143 1.0E-18 T 12-10-2018 IPR032816 SNARE associated Golgi protein vfu_A01667 71fe082b8b8b9e2ba5cb7ff3831480c5 186 SUPERFAMILY SSF48150 7 184 8.63E-76 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 vfu_A01667 71fe082b8b8b9e2ba5cb7ff3831480c5 186 Pfam PF03352 Methyladenine glycosylase 10 185 6.9E-76 T 12-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 vfu_A01667 71fe082b8b8b9e2ba5cb7ff3831480c5 186 Gene3D G3DSA:1.10.340.30 6 186 1.2E-79 T 12-10-2018 vfu_A01252 99b334c1d86aeead6c8f4118be35fa55 295 SUPERFAMILY SSF52540 22 282 2.66E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01252 99b334c1d86aeead6c8f4118be35fa55 295 Gene3D G3DSA:3.40.50.300 22 263 6.6E-58 T 12-10-2018 vfu_A01252 99b334c1d86aeead6c8f4118be35fa55 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 21 261 1.4E-20 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 vfu_A01252 99b334c1d86aeead6c8f4118be35fa55 295 PIRSF PIRSF003092 7 287 4.3E-85 T 12-10-2018 IPR025501 ATP binding protein MinD vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 Pfam PF00005 ABC transporter 378 531 4.3E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 Gene3D G3DSA:3.40.50.300 351 604 7.3E-93 T 12-10-2018 vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 SMART SM00382 386 577 3.4E-22 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 Gene3D G3DSA:1.20.1560.10 8 342 1.4E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 SUPERFAMILY SSF90123 22 522 6.8E-47 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 Pfam PF00664 ABC transporter transmembrane region 41 310 1.4E-17 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_A00216 6fff96df89edecc7b582a359ec0a1446 609 SUPERFAMILY SSF52540 351 601 5.23E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00132 20e41a1bf2b057aa27410ff4e0f39c7c 192 Gene3D G3DSA:1.10.10.60 1 65 1.6E-22 T 12-10-2018 vfu_B00132 20e41a1bf2b057aa27410ff4e0f39c7c 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 7.6E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00132 20e41a1bf2b057aa27410ff4e0f39c7c 192 SUPERFAMILY SSF48498 81 190 2.73E-15 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B00132 20e41a1bf2b057aa27410ff4e0f39c7c 192 SUPERFAMILY SSF46689 2 65 2.51E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00132 20e41a1bf2b057aa27410ff4e0f39c7c 192 Gene3D G3DSA:1.10.357.10 70 190 2.1E-16 T 12-10-2018 vfu_B00281 fd65982dcaed5bf0d36cec7ad6645df5 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site vfu_B00281 fd65982dcaed5bf0d36cec7ad6645df5 706 Gene3D G3DSA:3.20.70.20 121 687 2.1E-233 T 12-10-2018 vfu_B00281 fd65982dcaed5bf0d36cec7ad6645df5 706 Pfam PF03477 ATP cone domain 4 89 1.2E-20 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 vfu_B00281 fd65982dcaed5bf0d36cec7ad6645df5 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 9.2E-183 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 vfu_B00281 fd65982dcaed5bf0d36cec7ad6645df5 706 SUPERFAMILY SSF51998 121 687 6.87E-193 T 12-10-2018 vfu_B00281 fd65982dcaed5bf0d36cec7ad6645df5 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 2.9E-198 T 12-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 Gene3D G3DSA:2.170.130.10 9 137 5.1E-35 T 12-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 Gene3D G3DSA:2.40.170.20 138 670 1.2E-115 T 12-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 SUPERFAMILY SSF56935 1 670 1.03E-113 T 12-10-2018 vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 13 122 6.3E-26 T 12-10-2018 IPR012910 TonB-dependent receptor, plug domain vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 Pfam PF00593 TonB dependent receptor 209 668 1.9E-60 T 12-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 2 670 4.7E-162 T 12-10-2018 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0019867|GO:0022857|GO:0055085 vfu_B00231 a9ed27c8deb83f949cc1af1f451c5db1 670 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 1 670 1.3E-144 T 12-10-2018 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0015232|GO:0015886|GO:0019867 vfu_B00856 b5fb68a659df4efd33313839bf3110ed 297 SUPERFAMILY SSF103481 39 137 3.66E-16 T 12-10-2018 vfu_B00856 b5fb68a659df4efd33313839bf3110ed 297 Pfam PF00892 EamA-like transporter family 9 136 4.9E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00856 b5fb68a659df4efd33313839bf3110ed 297 Pfam PF00892 EamA-like transporter family 151 281 3.0E-16 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00856 b5fb68a659df4efd33313839bf3110ed 297 SUPERFAMILY SSF103481 187 283 9.55E-14 T 12-10-2018 vfu_A01313 a3244fe8452efafe16aa0aec8ad603ae 209 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 27.41 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 vfu_A01313 a3244fe8452efafe16aa0aec8ad603ae 209 SUPERFAMILY SSF52540 1 208 2.15E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01313 a3244fe8452efafe16aa0aec8ad603ae 209 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 vfu_A01313 a3244fe8452efafe16aa0aec8ad603ae 209 Pfam PF02223 Thymidylate kinase 8 198 1.9E-58 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 vfu_A01313 a3244fe8452efafe16aa0aec8ad603ae 209 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 4.8E-63 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 vfu_A01313 a3244fe8452efafe16aa0aec8ad603ae 209 Gene3D G3DSA:3.40.50.300 3 209 2.3E-63 T 12-10-2018 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 Gene3D G3DSA:3.40.430.10 142 368 1.1E-63 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 Gene3D G3DSA:3.40.140.10 3 140 6.1E-43 T 12-10-2018 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 Pfam PF01872 RibD C-terminal domain 152 358 1.1E-48 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 SUPERFAMILY SSF53927 8 150 4.14E-45 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 359 4.4E-126 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 363 1.5E-55 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 4.2E-18 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 PIRSF PIRSF006769 4 367 7.2E-119 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 vfu_A01059 54d1175b070cb2b63b888a562a2f8ea9 369 SUPERFAMILY SSF53597 149 360 3.56E-53 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 vfu_A02991 9e0f1f0709ca9ee35ff2f3df58caac8e 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 3.7E-29 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A02991 9e0f1f0709ca9ee35ff2f3df58caac8e 163 Gene3D G3DSA:3.30.70.560 2 153 1.0E-32 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A02991 9e0f1f0709ca9ee35ff2f3df58caac8e 163 SUPERFAMILY SSF55083 1 148 2.22E-37 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A02991 9e0f1f0709ca9ee35ff2f3df58caac8e 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 2.7E-25 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A01035 9e326a56c8617fdf6298cea633f4c170 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.7E-21 T 12-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 SUPERFAMILY SSF100950 278 511 1.23E-70 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 SMART SM00882 281 489 5.5E-4 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 SMART SM00882 4 241 2.6E-59 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 Gene3D G3DSA:3.40.1080.10 276 519 3.9E-100 T 12-10-2018 vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 Gene3D G3DSA:3.40.1080.10 1 265 8.2E-102 T 12-10-2018 vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 PIRSF PIRSF000858 1 518 3.9E-207 T 12-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 SUPERFAMILY SSF100950 3 251 4.79E-86 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B01435 2ab3278934cfa0f9a4aa27fb5a996d30 520 Pfam PF01144 Coenzyme A transferase 6 240 1.1E-31 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 Gene3D G3DSA:1.20.1480.50 153 248 1.3E-5 T 12-10-2018 vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 SUPERFAMILY SSF158472 196 240 4.58E-5 T 12-10-2018 vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 SMART SM00267 258 430 1.6E-52 T 12-10-2018 IPR000160 GGDEF domain vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 SUPERFAMILY SSF55073 274 428 7.06E-48 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 428 3.0E-45 T 12-10-2018 IPR000160 GGDEF domain vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 SMART SM00304 189 242 0.0035 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 Gene3D G3DSA:3.30.70.270 262 431 3.6E-55 T 12-10-2018 vfu_A01992 a83395a3e9a39a07e449a436b15005bd 444 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 426 2.8E-46 T 12-10-2018 IPR000160 GGDEF domain vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 Gene3D G3DSA:3.40.800.10 5 333 5.8E-132 T 12-10-2018 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 Pfam PF00491 Arginase family 46 324 1.5E-61 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 PRINTS PR00116 Arginase signature 125 140 7.7E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 PRINTS PR00116 Arginase signature 251 280 7.7E-5 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 326 43.038 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 PIRSF PIRSF036979 26 332 1.6E-26 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 326 1.1E-117 T 12-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 SUPERFAMILY SSF52768 13 330 5.76E-84 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily vfu_A02153 2498a9703d4b7838bfb2211a2f667934 334 ProSitePatterns PS01053 Arginase family signature. 254 275 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 vfu_A00403 7668fa6ab51872de1ed2521d0842910e 249 SMART SM01007 22 210 2.0E-62 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal vfu_A00403 7668fa6ab51872de1ed2521d0842910e 249 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 17 243 2.4E-118 T 12-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 vfu_A00403 7668fa6ab51872de1ed2521d0842910e 249 SUPERFAMILY SSF53639 17 235 3.34E-68 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily vfu_A00403 7668fa6ab51872de1ed2521d0842910e 249 Gene3D G3DSA:3.40.225.10 17 243 1.7E-59 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily vfu_A00403 7668fa6ab51872de1ed2521d0842910e 249 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 209 3.8E-44 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal vfu_A01239 17f1b355d72342538816df131d28c7e8 262 SUPERFAMILY SSF52540 2 228 3.9E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01239 17f1b355d72342538816df131d28c7e8 262 SMART SM00382 29 199 2.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01239 17f1b355d72342538816df131d28c7e8 262 Gene3D G3DSA:3.40.50.300 1 241 6.0E-56 T 12-10-2018 vfu_A01239 17f1b355d72342538816df131d28c7e8 262 Pfam PF00005 ABC transporter 20 148 3.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00673 aaa8b3ccc225dfc26c4fd5705287127a 334 Pfam PF00072 Response regulator receiver domain 5 115 1.7E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00673 aaa8b3ccc225dfc26c4fd5705287127a 334 SUPERFAMILY SSF52172 3 123 6.83E-30 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00673 aaa8b3ccc225dfc26c4fd5705287127a 334 SUPERFAMILY SSF103039 140 329 5.36E-38 T 12-10-2018 IPR028976 CheC-like superfamily vfu_B00673 aaa8b3ccc225dfc26c4fd5705287127a 334 Gene3D G3DSA:3.40.50.2300 1 126 3.9E-29 T 12-10-2018 vfu_B00673 aaa8b3ccc225dfc26c4fd5705287127a 334 SMART SM00448 3 115 5.7E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B00673 aaa8b3ccc225dfc26c4fd5705287127a 334 Gene3D G3DSA:3.40.1550.10 139 328 1.7E-30 T 12-10-2018 IPR028976 CheC-like superfamily vfu_B00192 858e3475c1fe096b59d9271e11d4be4c 368 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 337 1.0E-39 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_A00346 97c379e2b37206c364fe4b80dcb323c5 154 SUPERFAMILY SSF81573 61 119 3.27E-14 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily vfu_A00346 97c379e2b37206c364fe4b80dcb323c5 154 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 8 154 1.4E-59 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 vfu_A00346 97c379e2b37206c364fe4b80dcb323c5 154 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 136 13.273 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 vfu_A00346 97c379e2b37206c364fe4b80dcb323c5 154 Pfam PF00430 ATP synthase B/B' CF(0) 4 135 2.2E-34 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 vfu_A00346 97c379e2b37206c364fe4b80dcb323c5 154 Gene3D G3DSA:1.20.5.620 60 120 1.1E-22 T 12-10-2018 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 Gene3D G3DSA:3.40.605.10 10 452 1.2E-140 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 4 489 56.881 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 7 489 6.7E-248 T 12-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 SUPERFAMILY SSF53720 4 458 6.81E-121 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 Gene3D G3DSA:3.40.309.10 250 440 1.2E-140 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 vfu_B00708 7cdd587abd7349456e932d25a6238759 490 Pfam PF00171 Aldehyde dehydrogenase family 12 463 7.6E-120 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A02302 c21c34c50696dd47ebe95a0dd95a69f8 306 Pfam PF08668 HDOD domain 39 233 1.3E-36 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD vfu_A02302 c21c34c50696dd47ebe95a0dd95a69f8 306 SUPERFAMILY SSF109604 24 282 7.85E-38 T 12-10-2018 vfu_A02302 c21c34c50696dd47ebe95a0dd95a69f8 306 Gene3D G3DSA:1.10.3210.10 20 287 8.1E-38 T 12-10-2018 vfu_B00396 4333e5c62a9b5d72d370c45565156b59 345 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 332 2.0E-77 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid vfu_B00396 4333e5c62a9b5d72d370c45565156b59 345 Pfam PF05125 Phage major capsid protein, P2 family 9 332 3.3E-119 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid vfu_A03154 42121fd125722855b75de4e218643a64 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 2.7E-13 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain vfu_A03154 42121fd125722855b75de4e218643a64 62 Gene3D G3DSA:1.10.10.1100 1 57 1.4E-18 T 12-10-2018 vfu_B01319 b977c7323fdf3e59b562df92af9d38d8 411 SUPERFAMILY SSF51905 5 295 5.61E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01319 b977c7323fdf3e59b562df92af9d38d8 411 Pfam PF01266 FAD dependent oxidoreductase 6 397 7.2E-69 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_A02083 0ba44146cea4592c31b3411cab52e99e 187 Pfam PF07209 Protein of unknown function (DUF1415) 10 177 4.3E-66 T 12-10-2018 IPR009858 Protein of unknown function DUF1415 vfu_A02314 06c79b61139307be491e1f1a78418bae 171 SUPERFAMILY SSF48498 43 170 6.67E-42 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A02314 06c79b61139307be491e1f1a78418bae 171 Gene3D G3DSA:1.10.357.10 1 171 2.6E-36 T 12-10-2018 vfu_A00005 d3b0553e1b484b405ac4e69d4626c820 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 3.6E-43 T 12-10-2018 IPR017462 Sulphur relay, TusC/DsrF vfu_A00005 d3b0553e1b484b405ac4e69d4626c820 118 Gene3D G3DSA:3.40.1260.10 1 118 4.6E-33 T 12-10-2018 IPR027396 DsrEFH-like vfu_A00005 d3b0553e1b484b405ac4e69d4626c820 118 SUPERFAMILY SSF75169 1 118 2.69E-32 T 12-10-2018 IPR027396 DsrEFH-like vfu_A00005 d3b0553e1b484b405ac4e69d4626c820 118 Pfam PF02635 DsrE/DsrF-like family 2 118 1.2E-21 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein vfu_B01449 7649418e128b5bc18ccd07c2c8bdd373 79 Pfam PF04325 Protein of unknown function (DUF465) 29 73 2.1E-9 T 12-10-2018 IPR007420 Protein of unknown function DUF465 vfu_B01449 7649418e128b5bc18ccd07c2c8bdd373 79 Gene3D G3DSA:1.20.58.660 12 78 1.4E-12 T 12-10-2018 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.3E-79 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:3.40.1380.20 336 467 3.8E-43 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF50800 70 167 6.8E-30 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily vfu_A03026 af269732480586def5d7ff277bf95580 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.5E-29 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 5.8E-156 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:2.40.33.10 71 167 5.7E-147 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF51621 1 339 1.47E-101 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A03026 af269732480586def5d7ff277bf95580 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 6.5E-188 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 SUPERFAMILY SSF52935 323 469 1.57E-34 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 vfu_A03026 af269732480586def5d7ff277bf95580 470 Gene3D G3DSA:3.20.20.60 4 332 5.7E-147 T 12-10-2018 vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 SUPERFAMILY SSF51735 4 240 7.09E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 Gene3D G3DSA:3.40.50.720 3 243 5.2E-45 T 12-10-2018 vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_A01576 d11ddf90838a39695d0bab0ce71b6f8e 248 Pfam PF00106 short chain dehydrogenase 4 182 2.8E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 Pfam PF00162 Phosphoglycerate kinase 6 373 1.0E-138 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 Gene3D G3DSA:3.40.50.1260 10 379 4.7E-151 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.5E-83 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 Gene3D G3DSA:3.40.50.1260 165 373 4.7E-151 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.431 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 SUPERFAMILY SSF53748 3 382 7.89E-145 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03036 ed5b8a5aa5041f0d06614a5716b6796e 387 PIRSF PIRSF000724 1 387 1.3E-134 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A02280 5deaecb92f334dcbe12daaad90df84c7 200 Pfam PF13409 Glutathione S-transferase, N-terminal domain 9 73 2.1E-9 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_A02280 5deaecb92f334dcbe12daaad90df84c7 200 SUPERFAMILY SSF52833 3 87 1.71E-11 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02280 5deaecb92f334dcbe12daaad90df84c7 200 Gene3D G3DSA:3.40.30.10 1 81 1.7E-10 T 12-10-2018 vfu_A02280 5deaecb92f334dcbe12daaad90df84c7 200 Gene3D G3DSA:1.20.1050.10 82 181 7.3E-24 T 12-10-2018 vfu_A02280 5deaecb92f334dcbe12daaad90df84c7 200 SUPERFAMILY SSF47616 77 190 4.72E-7 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_B00067 86aa38f19a9ee0c3d377d6351a0a4cdb 154 Pfam PF00583 Acetyltransferase (GNAT) family 27 129 2.1E-13 T 12-10-2018 IPR000182 GNAT domain vfu_B00067 86aa38f19a9ee0c3d377d6351a0a4cdb 154 Gene3D G3DSA:3.40.630.30 1 154 4.1E-44 T 12-10-2018 vfu_B00067 86aa38f19a9ee0c3d377d6351a0a4cdb 154 SUPERFAMILY SSF55729 13 144 1.32E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00793 387872cd0e1cbe3b76484d4d15636ec4 168 PIRSF PIRSF028301 2 168 5.9E-55 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 vfu_B00793 387872cd0e1cbe3b76484d4d15636ec4 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 8 159 3.5E-55 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 vfu_B00793 387872cd0e1cbe3b76484d4d15636ec4 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 6 160 4.2E-52 T 12-10-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 vfu_A03086 dd79d0dd74e137634d86f6c88d18254f 322 SUPERFAMILY SSF53850 25 321 9.72E-88 T 12-10-2018 vfu_A03086 dd79d0dd74e137634d86f6c88d18254f 322 Pfam PF16868 NMT1-like family 30 319 2.7E-95 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family vfu_A03086 dd79d0dd74e137634d86f6c88d18254f 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 319 9.2E-113 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family vfu_A03086 dd79d0dd74e137634d86f6c88d18254f 322 Gene3D G3DSA:3.40.190.10 30 319 1.9E-110 T 12-10-2018 vfu_A03086 dd79d0dd74e137634d86f6c88d18254f 322 Gene3D G3DSA:3.40.190.10 117 255 1.9E-110 T 12-10-2018 vfu_B00141 3d2cd161b75a6d1a54ccd3c6890c35c1 182 Gene3D G3DSA:3.10.290.10 14 86 9.8E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 vfu_B00141 3d2cd161b75a6d1a54ccd3c6890c35c1 182 Pfam PF13275 S4 domain 21 84 5.4E-23 T 12-10-2018 vfu_B00141 3d2cd161b75a6d1a54ccd3c6890c35c1 182 SUPERFAMILY SSF55174 11 84 4.45E-18 T 12-10-2018 vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 5 258 6.0E-115 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 Gene3D G3DSA:3.40.50.1000 7 270 1.7E-97 T 12-10-2018 IPR023214 HAD superfamily vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 270 140.542 T 12-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 SUPERFAMILY SSF56784 5 259 2.61E-54 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 Gene3D G3DSA:1.10.150.240 23 101 1.7E-97 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 204 9.9E-10 T 12-10-2018 vfu_B00114 4dd42311e1a5ebc91724fa0751fe2178 270 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 52 204 5.5E-17 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A00131 452d9b92652a5dffa71ff960a995e0dd 252 Pfam PF06251 Capsule biosynthesis GfcC 22 244 8.3E-50 T 12-10-2018 IPR010425 Domain of unknown function DUF1017 vfu_A00131 452d9b92652a5dffa71ff960a995e0dd 252 Gene3D G3DSA:3.10.560.10 152 224 5.6E-14 T 12-10-2018 vfu_A03124 557f077a39b422c06d3b2080acde8967 595 Pfam PF15864 Protein glycosylation ligase 174 199 2.0E-11 T 12-10-2018 IPR031726 Protein glycosylation ligase domain vfu_A03124 557f077a39b422c06d3b2080acde8967 595 Pfam PF04932 O-Antigen ligase 222 366 4.0E-13 T 12-10-2018 IPR007016 O-antigen ligase-related vfu_A03124 557f077a39b422c06d3b2080acde8967 595 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 388 577 3.5E-64 T 12-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Gene3D G3DSA:2.70.240.20 141 560 2.1E-193 T 12-10-2018 vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Gene3D G3DSA:3.30.70.2270 278 325 2.1E-193 T 12-10-2018 vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Gene3D G3DSA:2.100.10.30 583 717 4.8E-33 T 12-10-2018 IPR036404 Jacalin-like lectin domain superfamily vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 SMART SM00458 460 589 4.0E-12 T 12-10-2018 IPR000772 Ricin B, lectin domain vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Gene3D G3DSA:3.30.110.130 23 107 1.4E-29 T 12-10-2018 vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Pfam PF12563 Hemolytic toxin N terminal 2 163 1.1E-64 T 12-10-2018 IPR022220 Hemolytic toxin, N-terminal vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 SUPERFAMILY SSF50370 456 560 4.75E-14 T 12-10-2018 IPR035992 Ricin B-like lectins vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Pfam PF16458 Beta-prism lectin 587 715 1.1E-51 T 12-10-2018 IPR032496 Hemolysin, beta-prism lectin vfu_B01125 08423a786ef18ef5ab1975f12c0903c8 717 Pfam PF07968 Leukocidin/Hemolysin toxin family 191 453 1.0E-72 T 12-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 vfu_A00212 5c30be6ebef0c4d5b25b113d89978439 658 SUPERFAMILY SSF81345 352 650 9.15E-61 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A00212 5c30be6ebef0c4d5b25b113d89978439 658 Gene3D G3DSA:1.10.3470.10 1 329 4.2E-60 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A00212 5c30be6ebef0c4d5b25b113d89978439 658 Gene3D G3DSA:1.10.3470.10 339 657 6.5E-69 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A00212 5c30be6ebef0c4d5b25b113d89978439 658 Pfam PF01032 FecCD transport family 379 650 8.3E-66 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_A00212 5c30be6ebef0c4d5b25b113d89978439 658 Pfam PF01032 FecCD transport family 11 323 2.6E-59 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_A00212 5c30be6ebef0c4d5b25b113d89978439 658 SUPERFAMILY SSF81345 9 323 3.14E-53 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00985 9e0cb2c6a904eb7c82ca6b7c17a84178 94 SUPERFAMILY SSF52091 1 84 8.04E-14 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B00985 9e0cb2c6a904eb7c82ca6b7c17a84178 94 Gene3D G3DSA:3.30.750.24 1 93 5.5E-13 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B00985 9e0cb2c6a904eb7c82ca6b7c17a84178 94 Pfam PF13466 STAS domain 3 81 2.7E-15 T 12-10-2018 IPR002645 STAS domain vfu_A01329 d822f551240b5d76db39f2e575e6b6b1 224 PIRSF PIRSF037290 1 222 1.0E-56 T 12-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 vfu_A01329 d822f551240b5d76db39f2e575e6b6b1 224 SUPERFAMILY SSF52540 47 155 3.1E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01329 d822f551240b5d76db39f2e575e6b6b1 224 Gene3D G3DSA:3.40.50.300 50 156 8.6E-33 T 12-10-2018 vfu_A01718 8c83551ca8b5006796e821344774ddcc 817 Pfam PF02687 FtsX-like permease family 715 808 4.1E-8 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 vfu_A01718 8c83551ca8b5006796e821344774ddcc 817 Pfam PF12704 MacB-like periplasmic core domain 465 656 8.1E-7 T 12-10-2018 IPR025857 MacB-like periplasmic core domain vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 277 2.6E-86 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 149 276 1.1E-45 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 150 285 1.0E-65 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 SMART SM00771 147 277 4.2E-70 T 12-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 Gene3D G3DSA:3.30.1400.10 146 285 1.3E-48 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 SUPERFAMILY SSF64383 149 282 1.28E-47 T 12-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 vfu_A02633 e668ccc00ca604d861fbcf5141cddbde 287 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 279 22.443 T 12-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 vfu_B00494 04a55044a57b06170f44c072fe357117 316 Pfam PF01032 FecCD transport family 24 312 2.8E-50 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B00494 04a55044a57b06170f44c072fe357117 316 SUPERFAMILY SSF81345 5 313 4.58E-56 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00494 04a55044a57b06170f44c072fe357117 316 Gene3D G3DSA:1.10.3470.10 2 315 1.4E-55 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A00654 23d071a6648cce48456f455c86f8d80d 189 SUPERFAMILY SSF52218 14 183 9.85E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A00654 23d071a6648cce48456f455c86f8d80d 189 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 188 47.226 T 12-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 vfu_A00654 23d071a6648cce48456f455c86f8d80d 189 Pfam PF02525 Flavodoxin-like fold 14 174 1.8E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold vfu_A00654 23d071a6648cce48456f455c86f8d80d 189 Gene3D G3DSA:3.40.50.360 13 183 6.5E-52 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_B00126 ff0af193c8da2fbdc9ed83eed9314233 172 Pfam PF00293 NUDIX domain 22 143 1.7E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_B00126 ff0af193c8da2fbdc9ed83eed9314233 172 Gene3D G3DSA:3.90.79.10 15 151 1.3E-24 T 12-10-2018 vfu_B00126 ff0af193c8da2fbdc9ed83eed9314233 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 vfu_B00126 ff0af193c8da2fbdc9ed83eed9314233 172 SUPERFAMILY SSF55811 18 142 9.07E-21 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A00580 86e8678d4902b54137e9245fe342ca0b 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 9.7E-103 T 12-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 vfu_A00580 86e8678d4902b54137e9245fe342ca0b 295 SUPERFAMILY SSF51730 21 293 1.0E-95 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like vfu_A00580 86e8678d4902b54137e9245fe342ca0b 295 Gene3D G3DSA:3.20.20.220 1 295 4.7E-111 T 12-10-2018 vfu_A00580 86e8678d4902b54137e9245fe342ca0b 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 1.6E-101 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 vfu_B01122 1ffdf078ee4c41a4969e9059a7451a77 300 Pfam PF00892 EamA-like transporter family 141 280 3.6E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01122 1ffdf078ee4c41a4969e9059a7451a77 300 Pfam PF00892 EamA-like transporter family 6 131 1.1E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01122 1ffdf078ee4c41a4969e9059a7451a77 300 SUPERFAMILY SSF103481 200 284 7.32E-10 T 12-10-2018 vfu_B01122 1ffdf078ee4c41a4969e9059a7451a77 300 SUPERFAMILY SSF103481 41 131 3.14E-8 T 12-10-2018 vfu_B01525 56c103e276223f54d37f8a37eab4bd78 322 Pfam PF04471 Restriction endonuclease 7 130 5.5E-12 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 vfu_B01525 56c103e276223f54d37f8a37eab4bd78 322 SUPERFAMILY SSF52980 12 131 3.54E-9 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 5.0E-23 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 SUPERFAMILY SSF55594 5 91 1.96E-24 T 12-10-2018 IPR035895 HPr-like superfamily vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 Gene3D G3DSA:3.30.1340.10 3 86 3.2E-28 T 12-10-2018 IPR035895 HPr-like superfamily vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 2.8E-13 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 2.8E-13 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 2.8E-13 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_A00729 d0e2ae0eb2ec4cdf27cf455e6635e5b3 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 1.7E-24 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like vfu_B01244 3cad94e32538deb96b2382af2481cfba 173 PIRSF PIRSF011443 2 173 1.5E-64 T 12-10-2018 IPR026267 Inner membrane protein YgjV vfu_B01244 3cad94e32538deb96b2382af2481cfba 173 Pfam PF10688 Bacterial inner membrane protein 7 163 3.4E-55 T 12-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV vfu_B00159 50319906ccfac08bc382e0fc7fbec9c5 147 SUPERFAMILY SSF102462 12 147 3.82E-33 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 vfu_B00159 50319906ccfac08bc382e0fc7fbec9c5 147 Gene3D G3DSA:3.40.1490.10 11 146 1.2E-12 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 vfu_B00159 50319906ccfac08bc382e0fc7fbec9c5 147 Pfam PF09391 Protein of unknown function (DUF2000) 13 147 1.4E-38 T 12-10-2018 IPR018988 Protein of unknown function DUF2000 vfu_B00159 50319906ccfac08bc382e0fc7fbec9c5 147 PIRSF PIRSF033736 7 147 1.1E-30 T 12-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 vfu_B01406 f6eb09ae515ba111ee950703fd8590b4 301 SUPERFAMILY SSF46689 242 290 3.51E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01406 f6eb09ae515ba111ee950703fd8590b4 301 Gene3D G3DSA:1.10.10.60 186 301 3.1E-23 T 12-10-2018 vfu_B01406 f6eb09ae515ba111ee950703fd8590b4 301 SUPERFAMILY SSF46689 191 239 1.88E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01406 f6eb09ae515ba111ee950703fd8590b4 301 Pfam PF12833 Helix-turn-helix domain 211 289 1.2E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01406 f6eb09ae515ba111ee950703fd8590b4 301 SMART SM00342 205 288 1.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 vfu_B01406 f6eb09ae515ba111ee950703fd8590b4 301 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 SMART SM00846 2 159 2.4E-74 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 1.0E-188 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PIRSF PIRSF000149 1 341 6.9E-126 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.9E-55 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 SUPERFAMILY SSF55347 159 321 3.27E-58 T 12-10-2018 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.5E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.5E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.5E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.5E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.5E-30 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Gene3D G3DSA:3.30.360.10 158 322 9.4E-128 T 12-10-2018 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 SUPERFAMILY SSF51735 2 185 1.7E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.579 T 12-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 109 1.4E-32 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 vfu_A03037 7fb9bd8c4ebbb18832967ea3fe4b9f4c 341 Gene3D G3DSA:3.40.50.720 3 332 9.4E-128 T 12-10-2018 vfu_B00252 6c94bb9c6a8139e67c565e5c38b47ea6 269 Gene3D G3DSA:3.20.20.450 26 264 6.8E-42 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00252 6c94bb9c6a8139e67c565e5c38b47ea6 269 Pfam PF00563 EAL domain 29 251 1.6E-42 T 12-10-2018 IPR001633 EAL domain vfu_B00252 6c94bb9c6a8139e67c565e5c38b47ea6 269 SUPERFAMILY SSF141868 30 252 6.28E-40 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00252 6c94bb9c6a8139e67c565e5c38b47ea6 269 SMART SM00052 11 254 1.7E-10 T 12-10-2018 IPR001633 EAL domain vfu_A00384 4917c6c1b298be3850f0bc6a13b9937c 399 Gene3D G3DSA:1.20.1720.10 14 387 7.4E-93 T 12-10-2018 vfu_A00384 4917c6c1b298be3850f0bc6a13b9937c 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 vfu_A00384 4917c6c1b298be3850f0bc6a13b9937c 399 SUPERFAMILY SSF103473 11 390 1.57E-58 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A00384 4917c6c1b298be3850f0bc6a13b9937c 399 Pfam PF07690 Major Facilitator Superfamily 18 354 1.3E-47 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A00384 4917c6c1b298be3850f0bc6a13b9937c 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 385 2.6E-70 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 vfu_B01379 af78266e06ba7f26f9eef9b303865d7c 549 Pfam PF09818 Predicted ATPase of the ABC class 3 434 2.4E-182 T 12-10-2018 IPR019195 ABC transporter, ATPase, putative vfu_B01379 af78266e06ba7f26f9eef9b303865d7c 549 SUPERFAMILY SSF52540 229 411 9.56E-6 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 SMART SM00671 72 107 0.017 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 SMART SM00671 108 143 1.0E-6 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 SMART SM00671 144 179 31.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 Gene3D G3DSA:1.25.40.10 33 211 2.9E-25 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 Pfam PF08238 Sel1 repeat 108 143 7.7E-6 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 Pfam PF08238 Sel1 repeat 76 106 0.15 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 Pfam PF08238 Sel1 repeat 149 171 190.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A00661 8aea4f9d24b5f078aab0b87ccbe26629 211 SUPERFAMILY SSF81901 64 176 3.79E-22 T 12-10-2018 vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 Pfam PF01047 MarR family 61 108 1.9E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 SMART SM00347 29 144 5.2E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 SUPERFAMILY SSF46785 6 160 5.09E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 100 6.5E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 84 6.5E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 120 6.5E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00264 bfff52c171abe4c55f3d216e57bd3739 163 Gene3D G3DSA:1.10.10.10 1 163 1.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01639 e182321aac289cb9bb16daa43d31c594 212 Pfam PF02698 DUF218 domain 28 143 2.4E-21 T 12-10-2018 IPR003848 Domain of unknown function DUF218 vfu_A01639 e182321aac289cb9bb16daa43d31c594 212 Gene3D G3DSA:3.40.50.620 18 156 5.1E-30 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_B01157 5c5675574a3d3abb4aef7a36b67e2dca 260 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 2 201 2.9E-14 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 vfu_B01157 5c5675574a3d3abb4aef7a36b67e2dca 260 Gene3D G3DSA:3.40.720.10 1 258 1.5E-28 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_B01157 5c5675574a3d3abb4aef7a36b67e2dca 260 SUPERFAMILY SSF53649 1 246 4.22E-46 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A01990 24c936d5513fcd681c4c791de1472fe8 380 Gene3D G3DSA:3.30.70.270 222 379 1.5E-49 T 12-10-2018 vfu_A01990 24c936d5513fcd681c4c791de1472fe8 380 SMART SM00267 212 379 1.4E-47 T 12-10-2018 IPR000160 GGDEF domain vfu_A01990 24c936d5513fcd681c4c791de1472fe8 380 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 377 2.6E-45 T 12-10-2018 IPR000160 GGDEF domain vfu_A01990 24c936d5513fcd681c4c791de1472fe8 380 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 375 2.8E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_A01990 24c936d5513fcd681c4c791de1472fe8 380 SUPERFAMILY SSF55073 229 377 1.65E-40 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_A01609 fd17bfdc42260d442f38fbc78aaf5646 242 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 41 219 5.2E-78 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 vfu_A01609 fd17bfdc42260d442f38fbc78aaf5646 242 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 242 86.528 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 vfu_A01609 fd17bfdc42260d442f38fbc78aaf5646 242 Gene3D G3DSA:2.30.210.20 4 63 5.2E-24 T 12-10-2018 vfu_A01609 fd17bfdc42260d442f38fbc78aaf5646 242 SUPERFAMILY SSF55729 5 232 1.27E-84 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01609 fd17bfdc42260d442f38fbc78aaf5646 242 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 6.1E-67 T 12-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 vfu_A01609 fd17bfdc42260d442f38fbc78aaf5646 242 Gene3D G3DSA:3.40.630.70 64 241 5.9E-62 T 12-10-2018 vfu_A01820 ce1a52758fcd3adb7e1113a6a7b737a2 353 Gene3D G3DSA:2.40.30.170 230 352 3.2E-36 T 12-10-2018 vfu_A01820 ce1a52758fcd3adb7e1113a6a7b737a2 353 Gene3D G3DSA:2.40.50.100 58 193 1.0E-17 T 12-10-2018 vfu_A01820 ce1a52758fcd3adb7e1113a6a7b737a2 353 SUPERFAMILY SSF111369 58 288 2.48E-14 T 12-10-2018 vfu_A01820 ce1a52758fcd3adb7e1113a6a7b737a2 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 294 1.0E-17 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain vfu_A01820 ce1a52758fcd3adb7e1113a6a7b737a2 353 Gene3D G3DSA:1.10.287.470 93 187 1.0E-17 T 12-10-2018 vfu_B00206 3807d0b7eaf208b36634a63f414949f8 292 Pfam PF11060 Protein of unknown function (DUF2861) 23 287 2.3E-97 T 12-10-2018 IPR021290 Protein of unknown function DUF2861 vfu_A02035 3b4143cc8df4825ac1a9e53f123f3f9c 183 Gene3D G3DSA:3.40.1350.10 52 163 5.5E-7 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 vfu_A02035 3b4143cc8df4825ac1a9e53f123f3f9c 183 Pfam PF08774 VRR-NUC domain 100 157 1.4E-8 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 vfu_A02035 3b4143cc8df4825ac1a9e53f123f3f9c 183 SMART SM00990 73 158 2.4E-4 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 vfu_A01683 7d66557a5b868406c1968cd215e26c7c 308 Gene3D G3DSA:3.40.50.300 2 238 4.9E-70 T 12-10-2018 vfu_A01683 7d66557a5b868406c1968cd215e26c7c 308 Pfam PF00005 ABC transporter 22 165 2.0E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01683 7d66557a5b868406c1968cd215e26c7c 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01683 7d66557a5b868406c1968cd215e26c7c 308 SUPERFAMILY SSF52540 5 228 2.25E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01683 7d66557a5b868406c1968cd215e26c7c 308 SMART SM00382 30 212 1.5E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01544 81470cb3365b6164b3224541c041269c 321 Gene3D G3DSA:3.40.50.2300 143 314 6.8E-105 T 12-10-2018 vfu_A01544 81470cb3365b6164b3224541c041269c 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 2.8E-118 T 12-10-2018 IPR007487 ABC transporter, substrate-binding protein vfu_A01544 81470cb3365b6164b3224541c041269c 321 SUPERFAMILY SSF53822 43 276 8.84E-19 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A01544 81470cb3365b6164b3224541c041269c 321 Gene3D G3DSA:3.40.50.2300 46 292 6.8E-105 T 12-10-2018 vfu_A02233 792e285d02d08ded3d2b24e8e1672078 285 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.2E-96 T 12-10-2018 IPR022522 Flagellar motor stator, MotA vfu_A02233 792e285d02d08ded3d2b24e8e1672078 285 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site vfu_A02233 792e285d02d08ded3d2b24e8e1672078 285 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 235 5.2E-12 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 SUPERFAMILY SSF52172 3 184 1.22E-43 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 Gene3D G3DSA:1.10.10.10 127 192 1.0E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 SMART SM00448 3 116 1.0E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 187 3.7E-9 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 Pfam PF00072 Response regulator receiver domain 5 116 5.1E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 188 1.3E-89 T 12-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 vfu_A02813 2d32c5296fccacf84664e8b9ac4f4f1e 203 Gene3D G3DSA:3.40.50.2300 1 126 4.0E-39 T 12-10-2018 vfu_A00276 31ee3e5a6ad4fa4e0b9819ce30399104 481 PIRSF PIRSF006247 1 481 6.1E-167 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 vfu_A00276 31ee3e5a6ad4fa4e0b9819ce30399104 481 Pfam PF02386 Cation transport protein 49 475 6.3E-49 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 vfu_A00276 31ee3e5a6ad4fa4e0b9819ce30399104 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 7.2E-112 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 vfu_A01889 48d389a6510ff2b41c17b78db58a56c3 245 Pfam PF02146 Sir2 family 13 186 1.1E-50 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 vfu_A01889 48d389a6510ff2b41c17b78db58a56c3 245 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.71 T 12-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 vfu_A01889 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.40.50.1220 8 227 5.6E-81 T 12-10-2018 vfu_A01889 48d389a6510ff2b41c17b78db58a56c3 245 Gene3D G3DSA:3.30.1600.10 22 158 5.6E-81 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily vfu_A01889 48d389a6510ff2b41c17b78db58a56c3 245 SUPERFAMILY SSF52467 6 234 1.16E-72 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily vfu_A01098 d7507c8ebb27df5b89d86385ed4d9ec3 281 SUPERFAMILY SSF56235 2 253 9.44E-52 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A01098 d7507c8ebb27df5b89d86385ed4d9ec3 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 2.6E-113 T 12-10-2018 IPR026869 Putative glutamine amidotransferase type 2 vfu_A01098 d7507c8ebb27df5b89d86385ed4d9ec3 281 Gene3D G3DSA:3.60.20.10 1 258 4.0E-100 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal vfu_A01655 da7c461bcdbc9145dea0306262f53b43 262 SUPERFAMILY SSF52540 3 252 4.36E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01655 da7c461bcdbc9145dea0306262f53b43 262 Pfam PF00005 ABC transporter 31 179 3.4E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01655 da7c461bcdbc9145dea0306262f53b43 262 SMART SM00382 39 228 4.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01655 da7c461bcdbc9145dea0306262f53b43 262 Gene3D G3DSA:3.40.50.300 3 260 1.4E-68 T 12-10-2018 vfu_A02508 9a20fa20e912874229e28f1b54cfd39d 194 Pfam PF11351 Holin of 3TMs, for gene-transfer release 65 168 5.5E-12 T 12-10-2018 IPR021497 Holin of 3TMs, for gene-transfer release vfu_B01124 b36728904b06cf3917f75e7519994bf7 418 Gene3D G3DSA:3.40.50.1110 134 414 6.8E-44 T 12-10-2018 IPR036514 SGNH hydrolase superfamily vfu_B01124 b36728904b06cf3917f75e7519994bf7 418 SUPERFAMILY SSF52266 148 410 5.19E-24 T 12-10-2018 vfu_B01124 b36728904b06cf3917f75e7519994bf7 418 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 149 408 1.6E-13 T 12-10-2018 IPR001087 GDSL lipase/esterase GO:0016788 vfu_B01124 b36728904b06cf3917f75e7519994bf7 418 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 149 160 - T 12-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 vfu_B00485 7292f4c262118177a6081c4e9f5e07ea 136 SUPERFAMILY SSF102462 3 135 3.35E-40 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 vfu_B00485 7292f4c262118177a6081c4e9f5e07ea 136 Gene3D G3DSA:3.40.1490.10 2 136 8.2E-53 T 12-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 vfu_B00485 7292f4c262118177a6081c4e9f5e07ea 136 Pfam PF09391 Protein of unknown function (DUF2000) 5 135 2.3E-40 T 12-10-2018 IPR018988 Protein of unknown function DUF2000 vfu_A02990 4bb94b9dbbaac78e0da2524e38c66947 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.288 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 vfu_A02990 4bb94b9dbbaac78e0da2524e38c66947 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 2.6E-72 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 vfu_A02990 4bb94b9dbbaac78e0da2524e38c66947 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 2.6E-80 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 SMART SM00382 29 214 2.7E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 Gene3D G3DSA:3.40.50.300 1 240 2.4E-74 T 12-10-2018 vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 SUPERFAMILY SSF50331 259 342 4.68E-8 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 SUPERFAMILY SSF52540 5 243 1.36E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 Pfam PF08402 TOBE domain 276 342 1.9E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_A00905 00a71d4de0072fb56708cbc5fdb50c6c 343 Pfam PF00005 ABC transporter 20 164 1.3E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02304 09d299957e978b6f69e9b1839286d581 135 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 1 133 1.0E-59 T 12-10-2018 IPR005642 Lysine exporter LysO vfu_A02304 09d299957e978b6f69e9b1839286d581 135 Pfam PF03956 Lysine exporter LysO 1 131 4.7E-43 T 12-10-2018 IPR005642 Lysine exporter LysO vfu_B00501 7ed64582c885fbb75cccbd2b3a69231c 312 Gene3D G3DSA:3.40.50.1820 30 312 1.7E-88 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00501 7ed64582c885fbb75cccbd2b3a69231c 312 Pfam PF00561 alpha/beta hydrolase fold 37 239 7.5E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_B00501 7ed64582c885fbb75cccbd2b3a69231c 312 SUPERFAMILY SSF53474 32 308 5.54E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02899 f378451535277ff4d57c0f16b84a947d 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.5E-69 T 12-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 vfu_A02899 f378451535277ff4d57c0f16b84a947d 161 Gene3D G3DSA:3.50.30.40 1 161 1.1E-65 T 12-10-2018 vfu_A02899 f378451535277ff4d57c0f16b84a947d 161 Pfam PF03737 Aldolase/RraA 5 152 4.6E-43 T 12-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein vfu_A02899 f378451535277ff4d57c0f16b84a947d 161 SUPERFAMILY SSF89562 1 158 9.55E-49 T 12-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily vfu_B01045 45ca9a980ab11447c5146d6350221e51 321 Gene3D G3DSA:3.40.50.300 60 231 3.1E-42 T 12-10-2018 vfu_B01045 45ca9a980ab11447c5146d6350221e51 321 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 8 295 30.333 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 vfu_B01045 45ca9a980ab11447c5146d6350221e51 321 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 42 288 1.1E-46 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 vfu_B01045 45ca9a980ab11447c5146d6350221e51 321 Gene3D G3DSA:1.10.40.50 233 316 4.7E-21 T 12-10-2018 vfu_B01045 45ca9a980ab11447c5146d6350221e51 321 Pfam PF03193 RsgA GTPase 58 231 3.0E-47 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 vfu_B01045 45ca9a980ab11447c5146d6350221e51 321 SUPERFAMILY SSF52540 75 291 2.59E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00224 ee03712c015ae8b5bba0f2ddf8c9823a 103 Pfam PF01253 Translation initiation factor SUI1 27 97 1.0E-19 T 12-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 vfu_B00224 ee03712c015ae8b5bba0f2ddf8c9823a 103 Gene3D G3DSA:3.30.780.10 23 103 1.1E-33 T 12-10-2018 vfu_B00224 ee03712c015ae8b5bba0f2ddf8c9823a 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 8.4E-40 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 vfu_B00224 ee03712c015ae8b5bba0f2ddf8c9823a 103 SUPERFAMILY SSF55159 4 99 4.05E-27 T 12-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 vfu_B00224 ee03712c015ae8b5bba0f2ddf8c9823a 103 PIRSF PIRSF037511 1 103 4.1E-33 T 12-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 Gene3D G3DSA:1.10.10.10 1 138 4.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 SMART SM00347 24 124 1.9E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 SUPERFAMILY SSF46785 5 136 3.29E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 Pfam PF01047 MarR family 32 89 4.1E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 8.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 8.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 8.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B01169 f47089e8dbbeba7aa591194159ad1481 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 8.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_B00554 dfce876ac220143155b3af532e818854 482 Gene3D G3DSA:3.20.20.450 227 480 1.4E-59 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00554 dfce876ac220143155b3af532e818854 482 Pfam PF00563 EAL domain 232 464 6.2E-47 T 12-10-2018 IPR001633 EAL domain vfu_B00554 dfce876ac220143155b3af532e818854 482 SMART SM00052 226 470 6.8E-55 T 12-10-2018 IPR001633 EAL domain vfu_B00554 dfce876ac220143155b3af532e818854 482 SUPERFAMILY SSF141868 231 477 2.22E-55 T 12-10-2018 IPR035919 EAL domain superfamily vfu_B00554 dfce876ac220143155b3af532e818854 482 Pfam PF12792 CSS motif domain associated with EAL 10 201 1.2E-29 T 12-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain vfu_B00957 155895e523bae786d1144a216a55488a 322 SUPERFAMILY SSF53850 94 292 1.99E-35 T 12-10-2018 vfu_B00957 155895e523bae786d1144a216a55488a 322 Pfam PF03466 LysR substrate binding domain 93 289 2.8E-31 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00957 155895e523bae786d1144a216a55488a 322 Gene3D G3DSA:3.40.190.10 163 260 2.6E-46 T 12-10-2018 vfu_B00957 155895e523bae786d1144a216a55488a 322 SUPERFAMILY SSF46785 4 85 7.56E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00957 155895e523bae786d1144a216a55488a 322 Gene3D G3DSA:3.40.190.10 103 286 2.6E-46 T 12-10-2018 vfu_B00957 155895e523bae786d1144a216a55488a 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.9E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00957 155895e523bae786d1144a216a55488a 322 Gene3D G3DSA:1.10.10.10 6 89 7.0E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00954 3bc2a706ed0c73fb2800893c51a0dace 147 SUPERFAMILY SSF55729 1 145 9.79E-32 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00954 3bc2a706ed0c73fb2800893c51a0dace 147 Gene3D G3DSA:3.40.630.30 6 147 3.2E-38 T 12-10-2018 vfu_A00954 3bc2a706ed0c73fb2800893c51a0dace 147 Pfam PF00583 Acetyltransferase (GNAT) family 15 121 3.4E-15 T 12-10-2018 IPR000182 GNAT domain vfu_A00954 3bc2a706ed0c73fb2800893c51a0dace 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 13 143 5.9E-37 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 vfu_A00121 e2c09451edcf08b09896e7da57fca3ef 337 Pfam PF04230 Polysaccharide pyruvyl transferase 35 285 1.3E-13 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase vfu_A01670 d99971e0c747fdb9fd0834e20aca716b 444 Pfam PF00209 Sodium:neurotransmitter symporter family 144 442 1.3E-25 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01670 d99971e0c747fdb9fd0834e20aca716b 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 121 1.0E-19 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01670 d99971e0c747fdb9fd0834e20aca716b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 4.0E-8 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01670 d99971e0c747fdb9fd0834e20aca716b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 14 35 4.0E-8 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01670 d99971e0c747fdb9fd0834e20aca716b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 43 62 4.0E-8 T 12-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 vfu_A01670 d99971e0c747fdb9fd0834e20aca716b 444 SUPERFAMILY SSF161070 6 443 1.57E-118 T 12-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 SMART SM00487 9 213 6.7E-60 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 Gene3D G3DSA:3.40.50.300 210 405 4.3E-48 T 12-10-2018 vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 Gene3D G3DSA:3.40.50.300 1 209 2.5E-74 T 12-10-2018 vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 Pfam PF00270 DEAD/DEAH box helicase 14 185 2.1E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 SUPERFAMILY SSF52540 65 351 1.18E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 SMART SM00490 249 330 1.1E-31 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 144 152 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_B01397 b21c95af0a666074a2a2d319507102e5 406 Pfam PF00271 Helicase conserved C-terminal domain 225 330 1.2E-27 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A02788 b6c933bce1b5394d434134042ede95cf 163 SUPERFAMILY SSF46785 1 120 7.58E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02788 b6c933bce1b5394d434134042ede95cf 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 120 6.5E-42 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type vfu_A02788 b6c933bce1b5394d434134042ede95cf 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 39 57 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site vfu_A02788 b6c933bce1b5394d434134042ede95cf 163 Pfam PF02082 Transcriptional regulator 1 73 9.1E-23 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type vfu_A02788 b6c933bce1b5394d434134042ede95cf 163 Gene3D G3DSA:1.10.10.10 1 134 1.2E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.4E-57 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 Gene3D G3DSA:3.40.50.1360 7 207 9.7E-78 T 12-10-2018 vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.491 T 12-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 Gene3D G3DSA:3.30.70.260 125 196 9.7E-78 T 12-10-2018 vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 4.9E-67 T 12-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 SUPERFAMILY SSF75445 127 198 1.57E-23 T 12-10-2018 vfu_A00817 2a0c0455c1ec376e7eca50a84fdc0bed 218 SUPERFAMILY SSF100950 1 146 3.58E-47 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B01389 455e90afdf2e4ff172b59b268c928b32 246 SUPERFAMILY SSF88713 5 245 7.04E-94 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 vfu_B01389 455e90afdf2e4ff172b59b268c928b32 246 Gene3D G3DSA:3.20.20.370 1 246 2.5E-100 T 12-10-2018 vfu_B01389 455e90afdf2e4ff172b59b268c928b32 246 Pfam PF03746 LamB/YcsF family 6 245 4.6E-97 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 vfu_B01389 455e90afdf2e4ff172b59b268c928b32 246 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 246 41.958 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 vfu_B01396 74c29d218dca7abb5ef058e50cc3bbe8 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 1.4E-30 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 vfu_B01396 74c29d218dca7abb5ef058e50cc3bbe8 193 PIRSF PIRSF011489 1 193 6.4E-82 T 12-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 vfu_A00146 c16cd81ed3a85ad3ffd107fd8eb929a1 263 SUPERFAMILY SSF53448 3 145 1.53E-23 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00146 c16cd81ed3a85ad3ffd107fd8eb929a1 263 Pfam PF00535 Glycosyl transferase family 2 10 116 1.4E-15 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 vfu_A00146 c16cd81ed3a85ad3ffd107fd8eb929a1 263 Gene3D G3DSA:3.90.550.10 1 194 4.4E-21 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 147 6.4E-21 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 SUPERFAMILY SSF160246 4 145 2.51E-37 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 Gene3D G3DSA:3.40.50.300 289 565 2.1E-100 T 12-10-2018 vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 SMART SM00382 314 435 0.0047 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 Pfam PF00437 Type II/IV secretion system protein 191 453 7.0E-78 T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 SUPERFAMILY SSF52540 180 559 1.27E-92 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A03112 355dd9f5e459d636c8a37a4194afad07 574 Gene3D G3DSA:3.30.450.90 147 286 1.1E-42 T 12-10-2018 vfu_B00707 211a08b832c3a721e04235b83a7774d2 449 Gene3D G3DSA:3.75.10.20 1 449 8.7E-210 T 12-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 vfu_B00707 211a08b832c3a721e04235b83a7774d2 449 SUPERFAMILY SSF55909 6 449 1.28E-205 T 12-10-2018 vfu_B00707 211a08b832c3a721e04235b83a7774d2 449 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 4 449 59.39 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 vfu_B00707 211a08b832c3a721e04235b83a7774d2 449 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 6 448 1.7E-241 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 vfu_B00707 211a08b832c3a721e04235b83a7774d2 449 Pfam PF04996 Succinylarginine dihydrolase 6 448 5.2E-223 T 12-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 Gene3D G3DSA:3.30.1390.10 53 123 4.4E-31 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 SUPERFAMILY SSF48300 4 59 4.45E-18 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 8.5E-49 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 SUPERFAMILY SSF54736 52 123 1.2E-24 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 Gene3D G3DSA:1.20.5.710 2 52 5.6E-24 T 12-10-2018 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 123 2.0E-17 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 1.8E-17 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.304 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00039 840e19b0b9135ae9379b30d93903c704 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 8.7E-31 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A02828 3905724f32c83d6c7d1a33bff0cb8f53 371 Gene3D G3DSA:2.40.40.10 56 352 9.8E-136 T 12-10-2018 IPR036908 RlpA-like domain superfamily vfu_A02828 3905724f32c83d6c7d1a33bff0cb8f53 371 Pfam PF03562 MltA specific insert domain 88 256 2.1E-37 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 vfu_A02828 3905724f32c83d6c7d1a33bff0cb8f53 371 Gene3D G3DSA:2.40.240.50 123 261 9.8E-136 T 12-10-2018 vfu_A02828 3905724f32c83d6c7d1a33bff0cb8f53 371 SMART SM00925 123 256 1.8E-66 T 12-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 vfu_A02828 3905724f32c83d6c7d1a33bff0cb8f53 371 Pfam PF06725 3D domain 276 352 8.6E-21 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 vfu_A02828 3905724f32c83d6c7d1a33bff0cb8f53 371 SUPERFAMILY SSF50685 24 354 5.23E-103 T 12-10-2018 IPR036908 RlpA-like domain superfamily vfu_B01075 5e9b5827ec12169c4d310fd64767cb10 156 Pfam PF00174 Oxidoreductase molybdopterin binding domain 58 120 1.2E-4 T 12-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 vfu_B01075 5e9b5827ec12169c4d310fd64767cb10 156 SUPERFAMILY SSF56524 29 150 4.05E-12 T 12-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 vfu_B01240 cbcd4958e9b5f55bc824a2576cc3b8bc 330 PIRSF PIRSF006470 3 329 7.9E-68 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_B01240 cbcd4958e9b5f55bc824a2576cc3b8bc 330 SUPERFAMILY SSF53850 145 270 2.35E-5 T 12-10-2018 vfu_B01240 cbcd4958e9b5f55bc824a2576cc3b8bc 330 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 311 3.9E-69 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_B01240 cbcd4958e9b5f55bc824a2576cc3b8bc 330 Gene3D G3DSA:3.40.190.170 31 330 3.9E-86 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_B01240 cbcd4958e9b5f55bc824a2576cc3b8bc 330 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 278 1.2E-56 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 vfu_A03022 f8e537c451d42271c05fe7510e238ec9 592 Gene3D G3DSA:3.40.630.30 315 457 1.1E-6 T 12-10-2018 vfu_A03022 f8e537c451d42271c05fe7510e238ec9 592 Pfam PF01553 Acyltransferase 68 195 4.2E-6 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A03022 f8e537c451d42271c05fe7510e238ec9 592 SMART SM00563 75 199 1.3E-6 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A03022 f8e537c451d42271c05fe7510e238ec9 592 SUPERFAMILY SSF69593 51 210 1.83E-8 T 12-10-2018 vfu_A03022 f8e537c451d42271c05fe7510e238ec9 592 Pfam PF13444 Acetyltransferase (GNAT) domain 331 432 3.7E-22 T 12-10-2018 vfu_A03022 f8e537c451d42271c05fe7510e238ec9 592 SUPERFAMILY SSF55729 314 454 5.83E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00622 3b438ae5b339aecdeb2d5872989115fb 292 SUPERFAMILY SSF48452 182 268 2.31E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00622 3b438ae5b339aecdeb2d5872989115fb 292 Gene3D G3DSA:1.25.40.10 106 279 3.0E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00622 3b438ae5b339aecdeb2d5872989115fb 292 SMART SM00028 196 229 1.2 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_B00622 3b438ae5b339aecdeb2d5872989115fb 292 SMART SM00028 230 263 0.04 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_B00059 0865e1d68ddcdd737eeb7a69e1d5ff0f 157 Pfam PF08534 Redoxin 3 154 1.0E-39 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 vfu_B00059 0865e1d68ddcdd737eeb7a69e1d5ff0f 157 SUPERFAMILY SSF52833 1 157 2.73E-36 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00059 0865e1d68ddcdd737eeb7a69e1d5ff0f 157 Gene3D G3DSA:3.40.30.10 2 157 2.0E-60 T 12-10-2018 vfu_A00453 fb495fdf56f18f8b65afa86fd05b2452 165 Pfam PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) 32 129 9.2E-10 T 12-10-2018 IPR022778 CDKN3 domain GO:0004721|GO:0004725 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 vfu_A00453 fb495fdf56f18f8b65afa86fd05b2452 165 SUPERFAMILY SSF52799 14 160 2.04E-32 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like vfu_A00453 fb495fdf56f18f8b65afa86fd05b2452 165 Gene3D G3DSA:3.90.190.10 6 164 4.9E-28 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like vfu_A00453 fb495fdf56f18f8b65afa86fd05b2452 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 109 119 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 vfu_B01133 6ce4ee28d0c0932e1da43004c7332be0 364 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 122 243 2.3E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01133 6ce4ee28d0c0932e1da43004c7332be0 364 Pfam PF13682 Chemoreceptor zinc-binding domain 257 322 2.0E-13 T 12-10-2018 IPR025991 Chemoreceptor zinc-binding domain vfu_B01133 6ce4ee28d0c0932e1da43004c7332be0 364 Gene3D G3DSA:1.10.287.950 5 278 1.9E-39 T 12-10-2018 vfu_B01133 6ce4ee28d0c0932e1da43004c7332be0 364 SMART SM00283 44 254 3.5E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B01133 6ce4ee28d0c0932e1da43004c7332be0 364 SUPERFAMILY SSF58104 19 243 1.83E-37 T 12-10-2018 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 SUPERFAMILY SSF143856 118 234 5.23E-47 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 PIRSF PIRSF001491 1 406 2.6E-161 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 SUPERFAMILY SSF53649 1 406 2.88E-71 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 Gene3D G3DSA:3.40.720.10 3 406 8.9E-150 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.301 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 Gene3D G3DSA:3.30.70.1250 116 237 8.9E-150 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.8E-179 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 vfu_A02879 2d59bff008e38fdf205bd42966119a15 406 Pfam PF01676 Metalloenzyme superfamily 2 397 8.6E-44 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 vfu_A00849 45ccf2ddba3332a8be1439ae824996d9 295 Pfam PF16537 Type II secretion system protein B 230 289 1.1E-25 T 12-10-2018 IPR032389 Type II secretion system protein B vfu_B00450 50b894da7e59392cc27d0a26624ca1de 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 111 3.4E-17 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_B00450 50b894da7e59392cc27d0a26624ca1de 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 4.5E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00450 50b894da7e59392cc27d0a26624ca1de 229 SUPERFAMILY SSF161098 10 202 2.35E-38 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00450 50b894da7e59392cc27d0a26624ca1de 229 Gene3D G3DSA:1.10.3720.10 2 218 1.2E-47 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01049 50c935590b1f4de204761c6338e2894e 338 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 323 8.5E-46 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_A01049 50c935590b1f4de204761c6338e2894e 338 Gene3D G3DSA:3.40.190.170 34 338 1.2E-79 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 Gene3D G3DSA:3.40.50.880 4 196 2.3E-59 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 SUPERFAMILY SSF52317 6 195 3.77E-49 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 3.0E-13 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 3.0E-13 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 3.0E-13 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 Pfam PF00117 Glutamine amidotransferase class-I 9 189 2.1E-45 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.6E-34 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 7 21 3.6E-34 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 82 93 3.6E-34 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 127 139 3.6E-34 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 107 115 3.6E-34 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00097 Anthranilate synthase component II signature 55 64 3.6E-34 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 7 191 2.6E-55 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 52 66 2.2E-5 T 12-10-2018 vfu_A02219 dcef65d5e163dcd8a756fdbf95acacb4 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 2.2E-5 T 12-10-2018 vfu_A00283 212e8605e129620c2f7fc3021b002e7c 328 SUPERFAMILY SSF56112 6 328 9.91E-89 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_A00283 212e8605e129620c2f7fc3021b002e7c 328 Gene3D G3DSA:1.10.510.10 60 258 1.2E-122 T 12-10-2018 vfu_A00283 212e8605e129620c2f7fc3021b002e7c 328 Gene3D G3DSA:3.30.200.70 13 108 1.2E-122 T 12-10-2018 vfu_A00283 212e8605e129620c2f7fc3021b002e7c 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.817 T 12-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 vfu_A00283 212e8605e129620c2f7fc3021b002e7c 328 Pfam PF01636 Phosphotransferase enzyme family 36 253 3.9E-42 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase vfu_A00283 212e8605e129620c2f7fc3021b002e7c 328 Gene3D G3DSA:1.20.1270.170 149 307 1.2E-122 T 12-10-2018 vfu_A00526 a57e25bfe0a75e4b33e3a290d60d8f94 256 Gene3D G3DSA:3.40.50.1820 2 254 2.3E-68 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00526 a57e25bfe0a75e4b33e3a290d60d8f94 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 5 254 45.043 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 vfu_A00526 a57e25bfe0a75e4b33e3a290d60d8f94 256 Pfam PF00561 alpha/beta hydrolase fold 16 241 9.0E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A00526 a57e25bfe0a75e4b33e3a290d60d8f94 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 12 252 1.4E-106 T 12-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 vfu_A00526 a57e25bfe0a75e4b33e3a290d60d8f94 256 SUPERFAMILY SSF53474 5 252 7.14E-50 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 SMART SM00283 403 664 5.6E-52 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 SMART SM00304 335 388 7.9E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 SUPERFAMILY SSF58104 360 665 1.27E-60 T 12-10-2018 vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 Gene3D G3DSA:1.10.287.950 335 666 1.3E-63 T 12-10-2018 vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 172 9.3E-14 T 12-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 472 623 1.4E-36 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00502 0290d1eaf4a23324a9d05c1c8e49f759 666 Pfam PF00672 HAMP domain 335 379 2.7E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 Gene3D G3DSA:3.50.50.60 113 236 1.6E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 298 4.8E-60 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 3.7E-27 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.7E-27 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.7E-27 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 3.7E-27 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.7E-27 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 Gene3D G3DSA:3.50.50.60 5 306 1.6E-93 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 Pfam PF14759 Reductase C-terminal 317 398 1.3E-22 T 12-10-2018 IPR028202 Reductase, C-terminal vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 SUPERFAMILY SSF55424 309 398 9.61E-22 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 SUPERFAMILY SSF51905 2 307 4.48E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 6.3E-18 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 6.3E-18 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.3E-18 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 6.3E-18 T 12-10-2018 vfu_A01969 888cdefaf9829a2b4b9cad1d256493d5 399 Gene3D G3DSA:3.30.390.30 317 399 1.0E-21 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 vfu_B00313 2702f9491645058b0ee52b28f9c7069f 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 2.7E-50 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB vfu_B00313 2702f9491645058b0ee52b28f9c7069f 151 PIRSF PIRSF006105 1 151 1.8E-47 T 12-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB vfu_B00313 2702f9491645058b0ee52b28f9c7069f 151 Gene3D G3DSA:1.10.1130.10 65 132 1.9E-29 T 12-10-2018 vfu_B00313 2702f9491645058b0ee52b28f9c7069f 151 SUPERFAMILY SSF48695 48 147 1.15E-40 T 12-10-2018 IPR036280 Multiheme cytochrome superfamily vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 SUPERFAMILY SSF52833 109 185 9.27E-17 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 Gene3D G3DSA:3.40.30.10 109 185 5.8E-17 T 12-10-2018 vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 12-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 PRINTS PR00160 Glutaredoxin signature 108 126 1.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 PRINTS PR00160 Glutaredoxin signature 157 170 1.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 PRINTS PR00160 Glutaredoxin signature 171 184 1.5E-7 T 12-10-2018 IPR014025 Glutaredoxin subgroup vfu_B01086 10a196f39cd86be4d64f0f947b582d4a 204 Pfam PF00462 Glutaredoxin 109 174 1.2E-14 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 vfu_A02890 066c4636d01e7c1d8a406fe961913f73 183 Gene3D G3DSA:1.20.120.520 1 155 6.6E-18 T 12-10-2018 vfu_A02890 066c4636d01e7c1d8a406fe961913f73 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.1E-13 T 12-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 vfu_A02476 4308b95616196bcda7a3df3b457d3bbc 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 9 157 6.1E-31 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 vfu_A02476 4308b95616196bcda7a3df3b457d3bbc 185 PIRSF PIRSF004982 3 185 2.4E-57 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 vfu_A02476 4308b95616196bcda7a3df3b457d3bbc 185 Pfam PF03843 Outer membrane lipoprotein Slp family 18 162 2.1E-42 T 12-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 1.5E-15 T 12-10-2018 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 6.7E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 6.7E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 6.7E-14 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 2.8E-13 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 SMART SM00344 6 115 1.1E-34 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 Gene3D G3DSA:3.30.70.920 58 149 4.3E-18 T 12-10-2018 vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 SUPERFAMILY SSF46785 5 66 1.96E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 SUPERFAMILY SSF54909 66 153 7.78E-14 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00951 1b2672d303879f78060a2b6e1d2c89af 156 Gene3D G3DSA:1.10.10.10 2 57 1.4E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00902 3bb4d439820cffa097c27e71ebe9f87f 214 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 vfu_B00902 3bb4d439820cffa097c27e71ebe9f87f 214 Gene3D G3DSA:2.160.10.10 2 209 6.4E-56 T 12-10-2018 vfu_B00902 3bb4d439820cffa097c27e71ebe9f87f 214 SUPERFAMILY SSF51161 37 200 1.8E-42 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily vfu_B00902 3bb4d439820cffa097c27e71ebe9f87f 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 2.0E-11 T 12-10-2018 IPR001451 Hexapeptide repeat vfu_A01715 33336175a7b459ca4675eb0eb100c214 478 Pfam PF13460 NAD(P)H-binding 8 150 1.2E-12 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_A01715 33336175a7b459ca4675eb0eb100c214 478 SUPERFAMILY SSF51735 1 294 5.53E-41 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01715 33336175a7b459ca4675eb0eb100c214 478 Gene3D G3DSA:3.40.50.720 2 261 1.6E-29 T 12-10-2018 vfu_A01715 33336175a7b459ca4675eb0eb100c214 478 Pfam PF11066 Protein of unknown function (DUF2867) 333 465 3.8E-15 T 12-10-2018 IPR021295 Protein of unknown function DUF2867 vfu_A01115 c1767bda8042accf61937980d3b41280 141 Gene3D G3DSA:1.20.58.300 1 113 1.9E-8 T 12-10-2018 vfu_A01115 c1767bda8042accf61937980d3b41280 141 SUPERFAMILY SSF140566 1 113 1.7E-22 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 vfu_A01115 c1767bda8042accf61937980d3b41280 141 Pfam PF05130 FlgN protein 2 131 7.8E-25 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 vfu_A00484 cc543a002840a7066dfb79825eab42d9 123 Pfam PF07226 Protein of unknown function (DUF1422) 10 118 8.3E-49 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 vfu_A00484 cc543a002840a7066dfb79825eab42d9 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 10 116 5.0E-47 T 12-10-2018 IPR009867 Protein of unknown function DUF1422 vfu_A01280 9129f2bbe4da7c4b6887a6b4182699ed 306 Pfam PF00850 Histone deacetylase domain 26 285 5.0E-47 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 vfu_A01280 9129f2bbe4da7c4b6887a6b4182699ed 306 PRINTS PR01270 Histone deacetylase superfamily signature 121 144 1.8E-16 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 vfu_A01280 9129f2bbe4da7c4b6887a6b4182699ed 306 PRINTS PR01270 Histone deacetylase superfamily signature 155 170 1.8E-16 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 vfu_A01280 9129f2bbe4da7c4b6887a6b4182699ed 306 PRINTS PR01270 Histone deacetylase superfamily signature 229 239 1.8E-16 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 vfu_A01280 9129f2bbe4da7c4b6887a6b4182699ed 306 Gene3D G3DSA:3.40.800.20 1 300 3.1E-63 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 vfu_A01280 9129f2bbe4da7c4b6887a6b4182699ed 306 SUPERFAMILY SSF52768 3 286 6.23E-78 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily vfu_A01527 3dfa1fa15e128f23bcb37c9bc8bebf5d 260 SMART SM00563 92 202 6.3E-13 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_A01527 3dfa1fa15e128f23bcb37c9bc8bebf5d 260 SUPERFAMILY SSF69593 4 253 1.7E-25 T 12-10-2018 vfu_A01527 3dfa1fa15e128f23bcb37c9bc8bebf5d 260 Pfam PF01553 Acyltransferase 79 195 3.3E-15 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 vfu_B00169 521f99304368fe7dea356a423fe0e694 223 SUPERFAMILY SSF48008 71 202 2.17E-18 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_B00169 521f99304368fe7dea356a423fe0e694 223 Pfam PF07729 FCD domain 75 197 5.7E-15 T 12-10-2018 IPR011711 GntR, C-terminal vfu_B00169 521f99304368fe7dea356a423fe0e694 223 SUPERFAMILY SSF46785 5 69 5.25E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00169 521f99304368fe7dea356a423fe0e694 223 SMART SM00895 75 198 1.8E-7 T 12-10-2018 IPR011711 GntR, C-terminal vfu_B00169 521f99304368fe7dea356a423fe0e694 223 SMART SM00345 7 65 8.3E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00169 521f99304368fe7dea356a423fe0e694 223 Gene3D G3DSA:1.20.120.530 69 203 4.6E-17 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal vfu_B00169 521f99304368fe7dea356a423fe0e694 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 4.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 vfu_B00169 521f99304368fe7dea356a423fe0e694 223 Gene3D G3DSA:1.10.10.10 1 67 2.6E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02616 cd581cba7c2bdf9896836d6318cce94a 243 Gene3D G3DSA:1.10.10.10 1 68 4.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02616 cd581cba7c2bdf9896836d6318cce94a 243 SUPERFAMILY SSF46894 2 63 8.79E-13 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02616 cd581cba7c2bdf9896836d6318cce94a 243 SMART SM00862 1 63 2.3E-4 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02616 cd581cba7c2bdf9896836d6318cce94a 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 1 63 6.2E-15 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_B00305 925dc935171f1565d8a346907a34d41a 176 Gene3D G3DSA:3.40.630.30 2 169 2.5E-27 T 12-10-2018 vfu_B00305 925dc935171f1565d8a346907a34d41a 176 Pfam PF00583 Acetyltransferase (GNAT) family 47 139 3.1E-15 T 12-10-2018 IPR000182 GNAT domain vfu_B00305 925dc935171f1565d8a346907a34d41a 176 SUPERFAMILY SSF55729 1 155 9.64E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01960 50e42e8c4a072ffa814b5f94b23dcef5 189 SUPERFAMILY SSF50475 27 129 1.36E-16 T 12-10-2018 vfu_A01960 50e42e8c4a072ffa814b5f94b23dcef5 189 TIGRFAM TIGR04025 PPOX_FMN_DR2398: pyridoxamine 5'-phosphate oxidase, FMN-binding family 8 186 1.7E-64 T 12-10-2018 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent vfu_A01960 50e42e8c4a072ffa814b5f94b23dcef5 189 Gene3D G3DSA:2.30.110.10 22 146 3.8E-26 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_A01960 50e42e8c4a072ffa814b5f94b23dcef5 189 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 29 122 5.4E-16 T 12-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 vfu_B00112 bbeac9bacc788f0849e175df8d57f482 135 PIRSF PIRSF006092 16 127 6.0E-27 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 vfu_B00112 bbeac9bacc788f0849e175df8d57f482 135 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 124 5.4E-16 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 vfu_B00112 bbeac9bacc788f0849e175df8d57f482 135 SUPERFAMILY SSF54534 49 126 2.35E-15 T 12-10-2018 vfu_B00112 bbeac9bacc788f0849e175df8d57f482 135 Gene3D G3DSA:3.10.50.30 45 135 5.2E-26 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 vfu_B00112 bbeac9bacc788f0849e175df8d57f482 135 Pfam PF14760 Rnk N-terminus 6 43 1.8E-12 T 12-10-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain vfu_A00698 745f6d57644a93a8dddcc0168dd9b800 195 SUPERFAMILY SSF51206 24 146 3.14E-20 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like vfu_A00698 745f6d57644a93a8dddcc0168dd9b800 195 Gene3D G3DSA:2.60.120.10 4 147 9.6E-21 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_A00698 745f6d57644a93a8dddcc0168dd9b800 195 Pfam PF00027 Cyclic nucleotide-binding domain 37 120 3.3E-10 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain vfu_A00983 9e262c8e697dbe178128b31a0d11249c 147 Gene3D G3DSA:3.10.50.40 17 144 1.7E-40 T 12-10-2018 vfu_A00983 9e262c8e697dbe178128b31a0d11249c 147 Gene3D G3DSA:2.40.10.330 76 132 1.7E-40 T 12-10-2018 vfu_A00983 9e262c8e697dbe178128b31a0d11249c 147 SUPERFAMILY SSF54534 8 146 3.14E-36 T 12-10-2018 vfu_A00983 9e262c8e697dbe178128b31a0d11249c 147 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 8 144 1.7E-12 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain vfu_B00063 d8bc007decfad9bbbd90049b61cb7ced 178 SUPERFAMILY SSF48452 2 174 6.07E-68 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00063 d8bc007decfad9bbbd90049b61cb7ced 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 174 9.8E-63 T 12-10-2018 IPR010323 Protein of unknown function DUF924 vfu_B00063 d8bc007decfad9bbbd90049b61cb7ced 178 Gene3D G3DSA:1.20.58.320 1 77 5.7E-27 T 12-10-2018 vfu_B00063 d8bc007decfad9bbbd90049b61cb7ced 178 Gene3D G3DSA:1.25.40.10 78 178 1.5E-33 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00748 ff61eeae01e4dc895d8f8a052bb0f842 287 SUPERFAMILY SSF51735 2 235 1.15E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00748 ff61eeae01e4dc895d8f8a052bb0f842 287 Gene3D G3DSA:3.40.50.720 5 274 5.5E-69 T 12-10-2018 vfu_B00748 ff61eeae01e4dc895d8f8a052bb0f842 287 Pfam PF13460 NAD(P)H-binding 6 184 2.6E-10 T 12-10-2018 IPR016040 NAD(P)-binding domain vfu_B00748 ff61eeae01e4dc895d8f8a052bb0f842 287 Gene3D G3DSA:3.90.25.10 146 281 5.5E-69 T 12-10-2018 vfu_A00502 462b3dcf2f07d81ac36f0112bedceec9 304 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 12 287 23.572 T 12-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial vfu_A00502 462b3dcf2f07d81ac36f0112bedceec9 304 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 13 270 3.1E-80 T 12-10-2018 IPR017039 Virulence factor BrkB vfu_A00502 462b3dcf2f07d81ac36f0112bedceec9 304 Pfam PF03631 Virulence factor BrkB 24 271 3.6E-57 T 12-10-2018 IPR017039 Virulence factor BrkB vfu_A00502 462b3dcf2f07d81ac36f0112bedceec9 304 PIRSF PIRSF035875 2 292 3.0E-53 T 12-10-2018 IPR017039 Virulence factor BrkB vfu_A00211 9dfe70ef2565c01b8f257d3fb0f56a56 180 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 180 75.931 T 12-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria vfu_A00211 9dfe70ef2565c01b8f257d3fb0f56a56 180 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 19 179 1.9E-65 T 12-10-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria vfu_A00211 9dfe70ef2565c01b8f257d3fb0f56a56 180 Pfam PF03350 Uncharacterized protein family, UPF0114 27 143 4.2E-33 T 12-10-2018 IPR005134 Uncharacterised protein family UPF0114 vfu_B01442 23684cdad742a2e74159f0364fd90690 356 Gene3D G3DSA:3.40.190.10 152 323 2.3E-109 T 12-10-2018 vfu_B01442 23684cdad742a2e74159f0364fd90690 356 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 52 318 2.2E-40 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_B01442 23684cdad742a2e74159f0364fd90690 356 Gene3D G3DSA:3.40.190.170 36 337 2.3E-109 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_B01442 23684cdad742a2e74159f0364fd90690 356 PIRSF PIRSF039026 1 356 3.0E-121 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like vfu_B01416 57a039b77fcaf4eb8ce80ae015ed14fb 382 SUPERFAMILY SSF56796 4 381 2.75E-135 T 12-10-2018 vfu_B01416 57a039b77fcaf4eb8ce80ae015ed14fb 382 Gene3D G3DSA:3.40.50.1970 2 183 8.6E-59 T 12-10-2018 vfu_B01416 57a039b77fcaf4eb8ce80ae015ed14fb 382 Gene3D G3DSA:1.20.1090.10 184 382 6.6E-76 T 12-10-2018 vfu_B01416 57a039b77fcaf4eb8ce80ae015ed14fb 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_B01416 57a039b77fcaf4eb8ce80ae015ed14fb 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 vfu_B01416 57a039b77fcaf4eb8ce80ae015ed14fb 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 374 2.9E-127 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 vfu_A01931 d024cf1895918505cb68e326f9924047 1613 PIRSF PIRSF036761 1 1610 0.0 T 12-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 vfu_A01931 d024cf1895918505cb68e326f9924047 1613 SUPERFAMILY SSF53223 754 940 2.78E-25 T 12-10-2018 vfu_A01931 d024cf1895918505cb68e326f9924047 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 12-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 vfu_A01931 d024cf1895918505cb68e326f9924047 1613 SUPERFAMILY SSF51735 945 1281 5.51E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 Pfam PF02107 Flagellar L-ring protein 35 210 6.2E-59 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 209 23.475 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 PRINTS PR01008 Flagellar L-ring protein signature 57 69 1.3E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 PRINTS PR01008 Flagellar L-ring protein signature 172 186 1.3E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 PRINTS PR01008 Flagellar L-ring protein signature 125 140 1.3E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 PRINTS PR01008 Flagellar L-ring protein signature 188 202 1.3E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01362 dd256e3cf17555e95bcb46f63cce5c3c 212 PRINTS PR01008 Flagellar L-ring protein signature 151 167 1.3E-21 T 12-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 vfu_A01565 57d577c1b057cc6877c408337eeb1819 113 Gene3D G3DSA:2.102.10.10 1 108 4.8E-31 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A01565 57d577c1b057cc6877c408337eeb1819 113 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 2 106 5.5E-29 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 vfu_A01565 57d577c1b057cc6877c408337eeb1819 113 SUPERFAMILY SSF50022 3 109 1.08E-30 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 vfu_A01565 57d577c1b057cc6877c408337eeb1819 113 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 105 1.8E-31 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 Gene3D G3DSA:1.10.287.470 77 199 1.0E-37 T 12-10-2018 vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 Pfam PF13533 Biotin-lipoyl like 44 91 1.1E-15 T 12-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 Gene3D G3DSA:2.40.50.100 45 233 1.0E-37 T 12-10-2018 vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 Gene3D G3DSA:2.40.30.170 234 278 1.0E-37 T 12-10-2018 vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 SUPERFAMILY SSF111369 44 166 6.93E-14 T 12-10-2018 vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 SUPERFAMILY SSF111369 168 249 9.42E-7 T 12-10-2018 vfu_B00853 06bddcee08ba4a9be09e3d54f95974b3 352 Pfam PF13437 HlyD family secretion protein 200 277 4.4E-5 T 12-10-2018 vfu_A02338 3bbec87f08923bb9af5ac75cd1f52215 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 178 1.1E-32 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 vfu_A02338 3bbec87f08923bb9af5ac75cd1f52215 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 3 174 1.9E-40 T 12-10-2018 IPR011978 Uncharacterised protein family UPF0149 vfu_A02338 3bbec87f08923bb9af5ac75cd1f52215 189 SUPERFAMILY SSF101327 3 176 1.7E-29 T 12-10-2018 IPR036255 YgfB-like superfamily vfu_B01063 96daeddc881e381cb85ae7c189ad047a 317 Pfam PF08349 Protein of unknown function (DUF1722) 192 308 2.9E-43 T 12-10-2018 IPR013560 Domain of unknown function DUF1722 vfu_B01063 96daeddc881e381cb85ae7c189ad047a 317 PIRSF PIRSF037004 1 317 6.8E-136 T 12-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 vfu_B01063 96daeddc881e381cb85ae7c189ad047a 317 Pfam PF04463 Protein of unknown function (DUF523) 8 149 3.8E-37 T 12-10-2018 IPR007553 Domain of unknown function DUF523 vfu_A01807 af54d09fa7d4d48ad8f558f1a2dc32f3 503 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 5 431 9.9E-141 T 12-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane vfu_A02773 f8ca76e758cbd2795d097708fddce4db 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 3.7E-55 T 12-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 vfu_A02773 f8ca76e758cbd2795d097708fddce4db 204 PIRSF PIRSF006170 1 204 3.6E-53 T 12-10-2018 IPR026039 Uncharacterised protein family UPF0070 vfu_A02773 f8ca76e758cbd2795d097708fddce4db 204 Gene3D G3DSA:1.25.40.10 43 203 9.8E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02773 f8ca76e758cbd2795d097708fddce4db 204 SUPERFAMILY SSF48452 90 189 8.13E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01483 d4d629f4799e1fd65b9645caffa9eed9 300 Gene3D G3DSA:1.10.10.10 3 89 2.1E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01483 d4d629f4799e1fd65b9645caffa9eed9 300 SUPERFAMILY SSF53850 90 295 1.72E-48 T 12-10-2018 vfu_B01483 d4d629f4799e1fd65b9645caffa9eed9 300 SUPERFAMILY SSF46785 5 111 7.27E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01483 d4d629f4799e1fd65b9645caffa9eed9 300 Pfam PF03466 LysR substrate binding domain 88 293 1.7E-45 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B01483 d4d629f4799e1fd65b9645caffa9eed9 300 Gene3D G3DSA:3.40.190.290 91 293 8.8E-71 T 12-10-2018 vfu_B01483 d4d629f4799e1fd65b9645caffa9eed9 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.0E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 SMART SM00420 6 59 1.1E-13 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.1E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 Gene3D G3DSA:1.10.10.10 1 56 6.1E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01836 74c915055a2b9bbb5029555248fef063 252 SUPERFAMILY SSF100950 74 233 5.58E-25 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_A01836 74c915055a2b9bbb5029555248fef063 252 Pfam PF00455 DeoR C terminal sensor domain 75 232 7.4E-45 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_A01836 74c915055a2b9bbb5029555248fef063 252 Gene3D G3DSA:3.30.750.70 74 133 3.2E-5 T 12-10-2018 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 25 39 1.2E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 39 57 1.2E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 SMART SM01134 73 234 1.4E-56 T 12-10-2018 vfu_A01836 74c915055a2b9bbb5029555248fef063 252 SUPERFAMILY SSF46785 3 76 1.86E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 568 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 593 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 599 612 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 554 1.3E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 502 614 1.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 454 2.2E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 SUPERFAMILY SSF47384 374 455 1.37E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 Pfam PF00072 Response regulator receiver domain 765 878 1.1E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 SMART SM00388 389 454 6.5E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 SUPERFAMILY SSF55874 443 613 2.62E-46 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 SMART SM00387 501 615 8.6E-37 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 SMART SM00448 763 880 4.3E-35 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 SUPERFAMILY SSF52172 761 881 1.99E-36 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 Gene3D G3DSA:1.10.287.130 358 452 5.1E-28 T 12-10-2018 vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 Gene3D G3DSA:3.30.565.10 453 616 8.1E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_B01304 b0c5abf9db5c4d3a0d6c86d1fbd25ae8 886 Gene3D G3DSA:3.40.50.2300 745 884 7.7E-41 T 12-10-2018 vfu_A01662 52fcd856e318494e7b873328cb722ff8 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 4.7E-32 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 vfu_A01662 52fcd856e318494e7b873328cb722ff8 77 Pfam PF06667 Phage shock protein B 4 74 3.6E-31 T 12-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 vfu_A01984 c426b225941ab8c9be52afec7ee56474 148 Pfam PF05099 Tellurite resistance protein TerB 6 142 2.0E-38 T 12-10-2018 IPR007791 Co-chaperone DjlA, N-terminal vfu_A01984 c426b225941ab8c9be52afec7ee56474 148 SUPERFAMILY SSF158682 1 146 1.83E-31 T 12-10-2018 IPR029024 TerB-like vfu_A01984 c426b225941ab8c9be52afec7ee56474 148 Gene3D G3DSA:1.10.3680.10 1 138 9.0E-21 T 12-10-2018 IPR029024 TerB-like vfu_B00257 5d74a605029685e72a980d4ad62c2474 296 Gene3D G3DSA:3.40.140.10 148 296 2.5E-50 T 12-10-2018 vfu_B00257 5d74a605029685e72a980d4ad62c2474 296 PIRSF PIRSF015626 3 295 4.6E-66 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_B00257 5d74a605029685e72a980d4ad62c2474 296 Pfam PF02634 FdhD/NarQ family 41 291 1.9E-65 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_B00257 5d74a605029685e72a980d4ad62c2474 296 SUPERFAMILY SSF53927 32 291 4.21E-62 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 vfu_B00257 5d74a605029685e72a980d4ad62c2474 296 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 7 292 27.537 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 vfu_A01543 d1c939749925ace4212fa300c1bef3ee 128 Pfam PF04217 Protein of unknown function, DUF412 1 124 5.3E-49 T 12-10-2018 IPR007334 Uncharacterised protein family UPF0208 vfu_A00202 254afef4b2947340a6267294a43cc257 211 Pfam PF04191 Phospholipid methyltransferase 116 193 1.2E-7 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 vfu_A00202 254afef4b2947340a6267294a43cc257 211 Gene3D G3DSA:1.20.120.1630 7 208 3.9E-24 T 12-10-2018 vfu_B00125 74f196b1aa12b4b9516f3abb4745d8f3 310 PIRSF PIRSF028235 1 310 5.2E-190 T 12-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 vfu_B00125 74f196b1aa12b4b9516f3abb4745d8f3 310 SUPERFAMILY SSF64182 7 303 2.88E-12 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily vfu_B01338 f8593b2f64099c3b2a21adbd0ffcf3d5 208 PIRSF PIRSF006324 1 208 6.9E-55 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B01338 f8593b2f64099c3b2a21adbd0ffcf3d5 208 Pfam PF01810 LysE type translocator 15 205 1.4E-32 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B00523 0f0b668b5b4cedb8cb46e3a82d11ccf6 114 Pfam PF11777 Protein of unknown function (DUF3316) 2 110 1.5E-18 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_B00523 0f0b668b5b4cedb8cb46e3a82d11ccf6 114 PIRSF PIRSF028299 1 114 6.0E-19 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_A00740 9923caba222c5bf4ddc5029db4cc9cf8 248 Gene3D G3DSA:3.40.50.300 1 237 3.7E-64 T 12-10-2018 vfu_A00740 9923caba222c5bf4ddc5029db4cc9cf8 248 Pfam PF00005 ABC transporter 4 151 5.2E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00740 9923caba222c5bf4ddc5029db4cc9cf8 248 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00740 9923caba222c5bf4ddc5029db4cc9cf8 248 SUPERFAMILY SSF52540 2 220 1.46E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00740 9923caba222c5bf4ddc5029db4cc9cf8 248 SMART SM00382 12 218 1.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01444 7ee0a96795ae1a9fb902f5cf0d8715f2 530 Pfam PF08019 Domain of unknown function (DUF1705) 44 195 2.2E-42 T 12-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 vfu_A01444 7ee0a96795ae1a9fb902f5cf0d8715f2 530 Gene3D G3DSA:3.40.720.10 198 528 1.2E-80 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_A01444 7ee0a96795ae1a9fb902f5cf0d8715f2 530 SUPERFAMILY SSF53649 285 478 2.62E-18 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A01444 7ee0a96795ae1a9fb902f5cf0d8715f2 530 Pfam PF00884 Sulfatase 222 510 9.9E-43 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 vfu_A01034 a3f4b8119f6479ad01845489d87bc100 334 Gene3D G3DSA:3.10.520.20 15 334 2.2E-113 T 12-10-2018 vfu_A01034 a3f4b8119f6479ad01845489d87bc100 334 SUPERFAMILY SSF143631 23 332 7.85E-103 T 12-10-2018 IPR003374 ApbE-like superfamily vfu_A01034 a3f4b8119f6479ad01845489d87bc100 334 PIRSF PIRSF006268 1 333 2.3E-93 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 vfu_A01034 a3f4b8119f6479ad01845489d87bc100 334 Pfam PF02424 ApbE family 31 309 5.0E-85 T 12-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 vfu_B00154 b41013a1b457216fcf37b8c67aba34bb 172 Gene3D G3DSA:3.40.1280.10 7 149 1.2E-16 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_B00154 b41013a1b457216fcf37b8c67aba34bb 172 Pfam PF00588 SpoU rRNA Methylase family 7 140 2.7E-18 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 vfu_B00154 b41013a1b457216fcf37b8c67aba34bb 172 SUPERFAMILY SSF75217 5 145 3.53E-24 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_B00196 1f554b0476c61bd3a8dad30cd8bbe215 468 Pfam PF05231 MASE1 10 267 1.5E-15 T 12-10-2018 IPR007895 MASE1 vfu_B00196 1f554b0476c61bd3a8dad30cd8bbe215 468 SUPERFAMILY SSF55073 316 466 4.63E-41 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00196 1f554b0476c61bd3a8dad30cd8bbe215 468 Gene3D G3DSA:3.30.70.270 300 467 8.6E-47 T 12-10-2018 vfu_B00196 1f554b0476c61bd3a8dad30cd8bbe215 468 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 308 467 2.6E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_B00196 1f554b0476c61bd3a8dad30cd8bbe215 468 SMART SM00267 300 467 1.3E-38 T 12-10-2018 IPR000160 GGDEF domain vfu_B00196 1f554b0476c61bd3a8dad30cd8bbe215 468 Pfam PF00990 Diguanylate cyclase, GGDEF domain 313 464 1.9E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_B01477 d33c06767c1ce97f3557a9fd6835933f 452 PIRSF PIRSF006066 24 451 2.7E-149 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B01477 d33c06767c1ce97f3557a9fd6835933f 452 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 30 439 1.6E-104 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B01477 d33c06767c1ce97f3557a9fd6835933f 452 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 40 445 1.0E-131 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A02372 ce7ff596c17cbeb535b8f28c9de7e9c6 431 Pfam PF01228 Glycine radical 356 424 2.0E-18 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 vfu_A02372 ce7ff596c17cbeb535b8f28c9de7e9c6 431 Pfam PF02901 Pyruvate formate lyase-like 1 340 8.8E-139 T 12-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 vfu_A02372 ce7ff596c17cbeb535b8f28c9de7e9c6 431 SUPERFAMILY SSF51998 1 421 2.79E-171 T 12-10-2018 vfu_A02372 ce7ff596c17cbeb535b8f28c9de7e9c6 431 Gene3D G3DSA:3.20.70.20 1 430 8.5E-172 T 12-10-2018 vfu_A02196 c48fb35cfdb83fe8d35a0c0cc9df6d23 218 Gene3D G3DSA:2.60.120.620 1 215 6.7E-50 T 12-10-2018 vfu_A02196 c48fb35cfdb83fe8d35a0c0cc9df6d23 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 3.2E-52 T 12-10-2018 IPR018724 2OG-Fe dioxygenase vfu_B00821 51478bae0636d1fd6998f4890461be47 436 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 401 5.7E-61 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme vfu_B00821 51478bae0636d1fd6998f4890461be47 436 SUPERFAMILY SSF53686 51 435 2.47E-56 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_B00821 51478bae0636d1fd6998f4890461be47 436 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 6 434 2.2E-227 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 vfu_B00821 51478bae0636d1fd6998f4890461be47 436 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 104 118 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 vfu_B00821 51478bae0636d1fd6998f4890461be47 436 Gene3D G3DSA:3.40.50.1100 20 434 9.3E-197 T 12-10-2018 vfu_B00821 51478bae0636d1fd6998f4890461be47 436 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 436 260.546 T 12-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 vfu_B00821 51478bae0636d1fd6998f4890461be47 436 Gene3D G3DSA:3.40.50.1100 112 234 9.3E-197 T 12-10-2018 vfu_A02006 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Gene3D G3DSA:3.40.190.10 33 243 8.2E-50 T 12-10-2018 vfu_A02006 c55da4c0a50a41b25eb47bbefdb9ff3e 342 SUPERFAMILY SSF53850 29 259 7.04E-49 T 12-10-2018 vfu_A02006 c55da4c0a50a41b25eb47bbefdb9ff3e 342 SMART SM00062 38 267 2.8E-55 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02006 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 4.4E-29 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02006 c55da4c0a50a41b25eb47bbefdb9ff3e 342 Gene3D G3DSA:3.40.190.10 125 230 8.2E-50 T 12-10-2018 vfu_A02882 3461e55726f119a9e870bb41639d1a0f 56 TIGRFAM TIGR03510 XapX: XapX domain 4 50 4.3E-19 T 12-10-2018 IPR020017 XapX domain vfu_A01540 1c6a68864e37795d599bb35b508c4bd9 425 Pfam PF02308 MgtC family 16 141 9.8E-20 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 vfu_A01540 1c6a68864e37795d599bb35b508c4bd9 425 Pfam PF13194 Domain of unknown function (DUF4010) 189 398 2.8E-64 T 12-10-2018 IPR025105 Domain of unknown function DUF4010 vfu_A02489 367afbe867dee36a43d743ef54062cbf 294 SUPERFAMILY SSF74650 6 290 5.84E-75 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 vfu_A02489 367afbe867dee36a43d743ef54062cbf 294 Pfam PF01263 Aldose 1-epimerase 27 290 3.5E-50 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 vfu_A02489 367afbe867dee36a43d743ef54062cbf 294 Gene3D G3DSA:2.70.98.10 2 294 6.2E-88 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 vfu_A02489 367afbe867dee36a43d743ef54062cbf 294 PIRSF PIRSF016020 6 294 2.0E-62 T 12-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 vfu_A01704 7adb0d5e61be2fc1520bd0e631853eb9 246 Pfam PF08241 Methyltransferase domain 44 141 9.2E-15 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 vfu_A01704 7adb0d5e61be2fc1520bd0e631853eb9 246 SUPERFAMILY SSF53335 14 241 2.61E-34 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01704 7adb0d5e61be2fc1520bd0e631853eb9 246 Gene3D G3DSA:3.40.50.150 1 245 1.8E-48 T 12-10-2018 vfu_A02261 bc415424ac7706aea3060c6bfc61e209 244 SUPERFAMILY SSF117143 77 203 3.27E-10 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A02261 bc415424ac7706aea3060c6bfc61e209 244 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 116 4.2E-26 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A02261 bc415424ac7706aea3060c6bfc61e209 244 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 175 241 6.7E-17 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02926 e6edffd49007d7e07ad791c488cba241 155 Pfam PF05258 Protein of unknown function (DUF721) 15 92 1.7E-10 T 12-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 vfu_A02912 9a70126753a36f7ca3bed569c64b8551 301 Pfam PF03186 CobD/Cbib protein 3 267 6.5E-34 T 12-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 vfu_B01105 f4ba816464d2f4ae51edfe86a12863a0 231 Pfam PF02104 SURF1 family 8 211 9.8E-29 T 12-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_B00057 44aa159be75f74675d595853993abef0 131 Gene3D G3DSA:2.170.150.70 15 131 7.7E-38 T 12-10-2018 vfu_B00057 44aa159be75f74675d595853993abef0 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 114 9.1E-11 T 12-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 vfu_B00057 44aa159be75f74675d595853993abef0 131 SUPERFAMILY SSF51316 10 130 2.72E-31 T 12-10-2018 IPR011057 Mss4-like superfamily vfu_A02425 9b066afccf7cd5ce80f24afb8067b0ef 98 SMART SM00278 46 65 7.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02425 9b066afccf7cd5ce80f24afb8067b0ef 98 SMART SM00278 76 95 140.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 vfu_A02425 9b066afccf7cd5ce80f24afb8067b0ef 98 Pfam PF12836 Helix-hairpin-helix motif 35 96 7.2E-21 T 12-10-2018 vfu_A02425 9b066afccf7cd5ce80f24afb8067b0ef 98 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 30 98 8.7E-25 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain vfu_A02425 9b066afccf7cd5ce80f24afb8067b0ef 98 Gene3D G3DSA:1.10.150.280 25 97 1.8E-20 T 12-10-2018 vfu_A02425 9b066afccf7cd5ce80f24afb8067b0ef 98 SUPERFAMILY SSF47781 27 98 5.67E-26 T 12-10-2018 IPR010994 RuvA domain 2-like vfu_A01747 869c7fcc9fa052f95542396c8e4804f9 341 Pfam PF09375 Imelysin 44 320 2.6E-38 T 12-10-2018 IPR018976 Imelysin-like domain vfu_A01747 869c7fcc9fa052f95542396c8e4804f9 341 Gene3D G3DSA:1.20.1420.20 28 341 2.8E-70 T 12-10-2018 IPR038352 Imelysin-like domain superfamily vfu_A00356 a022cd3ad3bea489a7042acd5b2011dd 301 Pfam PF03466 LysR substrate binding domain 89 288 8.5E-23 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A00356 a022cd3ad3bea489a7042acd5b2011dd 301 Gene3D G3DSA:3.40.190.290 93 297 1.3E-13 T 12-10-2018 vfu_A00356 a022cd3ad3bea489a7042acd5b2011dd 301 Gene3D G3DSA:1.10.10.10 1 89 5.4E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00356 a022cd3ad3bea489a7042acd5b2011dd 301 SUPERFAMILY SSF46785 5 87 2.23E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A00356 a022cd3ad3bea489a7042acd5b2011dd 301 SUPERFAMILY SSF53850 89 289 2.17E-25 T 12-10-2018 vfu_A00356 a022cd3ad3bea489a7042acd5b2011dd 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A01975 712d290f9f78a14c820dc542d3eea1c9 157 PRINTS PR00111 Alpha/beta hydrolase fold signature 110 123 2.1E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01975 712d290f9f78a14c820dc542d3eea1c9 157 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 2.1E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01975 712d290f9f78a14c820dc542d3eea1c9 157 PRINTS PR00111 Alpha/beta hydrolase fold signature 124 137 2.1E-17 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01975 712d290f9f78a14c820dc542d3eea1c9 157 Gene3D G3DSA:3.40.50.1820 2 155 1.4E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01975 712d290f9f78a14c820dc542d3eea1c9 157 SUPERFAMILY SSF53474 23 144 6.89E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01975 712d290f9f78a14c820dc542d3eea1c9 157 Pfam PF00561 alpha/beta hydrolase fold 37 139 1.2E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02158 384d320cb392def82c5e0719c7dd5ab5 153 Gene3D G3DSA:1.20.120.1630 5 153 2.1E-23 T 12-10-2018 vfu_A02158 384d320cb392def82c5e0719c7dd5ab5 153 Pfam PF04191 Phospholipid methyltransferase 43 141 1.8E-13 T 12-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 vfu_A02158 384d320cb392def82c5e0719c7dd5ab5 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 9.0E-11 T 12-10-2018 vfu_B01486 5bd97c4a63672f007b328332040ac433 319 PIRSF PIRSF001439 1 318 1.1E-74 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 vfu_B01486 5bd97c4a63672f007b328332040ac433 319 SUPERFAMILY SSF51735 1 314 2.73E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01486 5bd97c4a63672f007b328332040ac433 319 Gene3D G3DSA:3.40.50.720 121 300 2.1E-88 T 12-10-2018 vfu_B01486 5bd97c4a63672f007b328332040ac433 319 Gene3D G3DSA:3.30.1780.10 4 314 2.1E-88 T 12-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 vfu_B01486 5bd97c4a63672f007b328332040ac433 319 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 3 315 6.0E-65 T 12-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 vfu_A02256 ed2d2bf22c327cb9887c2dd2faa7d478 128 Pfam PF10135 Rod binding protein 68 119 6.3E-15 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal vfu_A01101 a546aef0c609d8483d9f27967e480baa 213 Pfam PF14681 Uracil phosphoribosyltransferase 12 212 7.4E-64 T 12-10-2018 vfu_A01101 a546aef0c609d8483d9f27967e480baa 213 SUPERFAMILY SSF53271 8 211 5.77E-66 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A01101 a546aef0c609d8483d9f27967e480baa 213 Gene3D G3DSA:3.40.50.2020 6 213 7.0E-73 T 12-10-2018 vfu_A01101 a546aef0c609d8483d9f27967e480baa 213 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 7 213 44.215 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 vfu_A01101 a546aef0c609d8483d9f27967e480baa 213 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 7 213 1.1E-90 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 vfu_A00730 d564f315d8b6384c6d1063470536d1a7 286 SUPERFAMILY SSF52540 1 151 1.03E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00730 d564f315d8b6384c6d1063470536d1a7 286 Gene3D G3DSA:3.40.50.300 30 160 1.6E-5 T 12-10-2018 vfu_A00730 d564f315d8b6384c6d1063470536d1a7 286 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.884 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 vfu_A00730 d564f315d8b6384c6d1063470536d1a7 286 Pfam PF03668 P-loop ATPase protein family 1 284 1.2E-111 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 vfu_A00730 d564f315d8b6384c6d1063470536d1a7 286 PIRSF PIRSF005052 1 286 8.3E-107 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 vfu_B00473 13728f5b1f7c4354dc8666dbb076e2ac 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 1.2E-164 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_B00473 13728f5b1f7c4354dc8666dbb076e2ac 454 PIRSF PIRSF006446 2 452 7.1E-218 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_A00164 7d6f1088c2588014bac55fc6583dcc96 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.0E-119 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 vfu_A00164 7d6f1088c2588014bac55fc6583dcc96 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.3E-43 T 12-10-2018 IPR013527 YicC-like, N-terminal vfu_A00164 7d6f1088c2588014bac55fc6583dcc96 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 6.9E-35 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 vfu_A01113 430f95d8519abf74a4a91aef60579ff7 211 PIRSF PIRSF028688 1 211 4.1E-120 T 12-10-2018 IPR014549 Flagellar protein FlgO vfu_B00934 f16f9cbe2c6d331d5fa0a0091e823dbc 131 Pfam PF00581 Rhodanese-like domain 41 122 5.2E-10 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00934 f16f9cbe2c6d331d5fa0a0091e823dbc 131 SMART SM00450 30 127 6.3E-13 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00934 f16f9cbe2c6d331d5fa0a0091e823dbc 131 Gene3D G3DSA:3.40.250.10 11 128 4.2E-26 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B00934 f16f9cbe2c6d331d5fa0a0091e823dbc 131 SUPERFAMILY SSF52821 27 129 9.3E-23 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_A01442 a88fa3d3ff3c38e237201a5d2ca3912e 651 PIRSF PIRSF005091 11 637 5.5E-93 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like vfu_A01442 a88fa3d3ff3c38e237201a5d2ca3912e 651 Gene3D G3DSA:3.30.1120.80 572 649 1.8E-147 T 12-10-2018 vfu_A01442 a88fa3d3ff3c38e237201a5d2ca3912e 651 Pfam PF00884 Sulfatase 293 563 7.2E-43 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 vfu_A01442 a88fa3d3ff3c38e237201a5d2ca3912e 651 Gene3D G3DSA:3.40.720.10 284 570 1.8E-147 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_A01442 a88fa3d3ff3c38e237201a5d2ca3912e 651 SUPERFAMILY SSF53649 291 588 1.57E-64 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_B01467 0a5a8ac20edd20b058b2ce3b933a2ce0 172 SUPERFAMILY SSF81342 1 166 1.1E-29 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 vfu_B01467 0a5a8ac20edd20b058b2ce3b933a2ce0 172 Pfam PF01292 Prokaryotic cytochrome b561 6 166 5.9E-22 T 12-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 vfu_B01467 0a5a8ac20edd20b058b2ce3b933a2ce0 172 Gene3D G3DSA:1.20.950.20 23 156 2.5E-10 T 12-10-2018 vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 Pfam PF14559 Tetratricopeptide repeat 378 435 2.5E-7 T 12-10-2018 vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 Pfam PF13519 von Willebrand factor type A domain 89 195 3.0E-12 T 12-10-2018 IPR002035 von Willebrand factor, type A vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 SUPERFAMILY SSF53300 89 277 2.11E-15 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 Gene3D G3DSA:3.40.50.410 87 285 7.2E-29 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 SUPERFAMILY SSF48452 349 447 2.17E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 Gene3D G3DSA:1.25.40.10 371 480 2.6E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00697 e019e33d575358c63f0d32474ffc669b 653 SMART SM00028 398 431 1.1E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_B00495 7f993f9f07aec56eebcbd829d2d76c69 304 Pfam PF01032 FecCD transport family 2 298 1.2E-59 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B00495 7f993f9f07aec56eebcbd829d2d76c69 304 Gene3D G3DSA:1.10.3470.10 1 303 7.5E-58 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00495 7f993f9f07aec56eebcbd829d2d76c69 304 SUPERFAMILY SSF81345 2 298 1.96E-59 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A00269 3decb762a8e28ef8debbcbc04f17a459 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 1.0E-60 T 12-10-2018 IPR007456 Smg vfu_A00269 3decb762a8e28ef8debbcbc04f17a459 158 Hamap MF_00598 Protein Smg [smg]. 2 158 33.256 T 12-10-2018 IPR007456 Smg vfu_B00744 6da7ba1327f20c1078a2bc7ddea20688 391 SUPERFAMILY SSF53448 37 296 9.38E-43 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_B00744 6da7ba1327f20c1078a2bc7ddea20688 391 Pfam PF13641 Glycosyltransferase like family 2 40 272 5.9E-22 T 12-10-2018 vfu_B00744 6da7ba1327f20c1078a2bc7ddea20688 391 Gene3D G3DSA:3.90.550.10 26 260 3.6E-37 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_B01231 96e6eb2bfaa2131e235b3294bc433f52 308 SUPERFAMILY SSF53613 2 301 1.12E-74 T 12-10-2018 IPR029056 Ribokinase-like vfu_B01231 96e6eb2bfaa2131e235b3294bc433f52 308 Gene3D G3DSA:3.40.1190.20 2 306 2.6E-84 T 12-10-2018 IPR029056 Ribokinase-like vfu_B01231 96e6eb2bfaa2131e235b3294bc433f52 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 vfu_B01231 96e6eb2bfaa2131e235b3294bc433f52 308 Pfam PF00294 pfkB family carbohydrate kinase 4 302 2.7E-65 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_A01463 dd28970f44edca5158a804b86e583e7a 640 SUPERFAMILY SSF51735 419 559 1.02E-31 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01463 dd28970f44edca5158a804b86e583e7a 640 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 9.5E-58 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 vfu_A01463 dd28970f44edca5158a804b86e583e7a 640 Gene3D G3DSA:1.20.1530.20 2 399 1.8E-74 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A01463 dd28970f44edca5158a804b86e583e7a 640 Gene3D G3DSA:3.40.50.720 419 579 8.3E-36 T 12-10-2018 vfu_A01463 dd28970f44edca5158a804b86e583e7a 640 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 301 1.5E-75 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 vfu_A01463 dd28970f44edca5158a804b86e583e7a 640 Pfam PF02254 TrkA-N domain 422 536 2.6E-24 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A01140 5994dfa82ca4df36f5e13f98fdfbfd4d 204 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 28 201 9.6E-40 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 vfu_A01140 5994dfa82ca4df36f5e13f98fdfbfd4d 204 Gene3D G3DSA:2.50.20.10 25 203 5.9E-55 T 12-10-2018 vfu_A01140 5994dfa82ca4df36f5e13f98fdfbfd4d 204 SUPERFAMILY SSF89392 19 202 7.85E-49 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX vfu_A01140 5994dfa82ca4df36f5e13f98fdfbfd4d 204 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 3 202 26.369 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 vfu_A01140 5994dfa82ca4df36f5e13f98fdfbfd4d 204 Pfam PF03550 Outer membrane lipoprotein LolB 44 200 2.3E-45 T 12-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 vfu_A02164 35131f8790b9c82343344fb31571334d 339 Gene3D G3DSA:1.10.287.110 275 339 2.0E-11 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A02164 35131f8790b9c82343344fb31571334d 339 SMART SM00671 36 71 1.5E-6 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A02164 35131f8790b9c82343344fb31571334d 339 SMART SM00671 72 107 0.073 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A02164 35131f8790b9c82343344fb31571334d 339 SMART SM00671 108 143 370.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A02164 35131f8790b9c82343344fb31571334d 339 Pfam PF08238 Sel1 repeat 74 101 0.0062 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A02164 35131f8790b9c82343344fb31571334d 339 Pfam PF08238 Sel1 repeat 38 71 1.8E-5 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A02164 35131f8790b9c82343344fb31571334d 339 Pfam PF08238 Sel1 repeat 130 142 17.0 T 12-10-2018 IPR006597 Sel1-like repeat vfu_A02164 35131f8790b9c82343344fb31571334d 339 SUPERFAMILY SSF46565 284 336 6.93E-12 T 12-10-2018 IPR036869 Chaperone J-domain superfamily vfu_A02164 35131f8790b9c82343344fb31571334d 339 SUPERFAMILY SSF81901 29 160 3.66E-23 T 12-10-2018 vfu_A02164 35131f8790b9c82343344fb31571334d 339 Gene3D G3DSA:1.25.40.10 22 194 3.1E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 Pfam PF01047 MarR family 30 87 1.6E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.7E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 Gene3D G3DSA:1.10.10.10 1 139 3.2E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A01819 761b86a77cac91df901e5441a31977b2 139 SMART SM00347 23 123 2.4E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 vfu_A01819 761b86a77cac91df901e5441a31977b2 139 SUPERFAMILY SSF46785 5 138 3.43E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01697 5c578f5afd1ca9df0b20b540488c9758 259 SUPERFAMILY SSF52266 42 222 6.41E-12 T 12-10-2018 vfu_A01697 5c578f5afd1ca9df0b20b540488c9758 259 Gene3D G3DSA:3.40.50.1110 33 257 6.5E-43 T 12-10-2018 IPR036514 SGNH hydrolase superfamily vfu_A00569 21e437dd443a2cad789a7c01cc12db38 163 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 1.1E-34 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 Gene3D G3DSA:3.90.180.10 12 370 1.8E-153 T 12-10-2018 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 Pfam PF00107 Zinc-binding dehydrogenase 203 322 4.9E-26 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 SUPERFAMILY SSF51735 166 340 2.08E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 8 375 4.5E-228 T 12-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 SMART SM00829 16 373 7.7E-4 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 Gene3D G3DSA:3.40.50.720 180 318 1.8E-153 T 12-10-2018 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 SUPERFAMILY SSF50129 324 375 1.22E-12 T 12-10-2018 IPR011032 GroES-like superfamily vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 160 1.2E-25 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 vfu_A02719 d6b2e4e9ba4945838e67fd2541f3ce01 376 SUPERFAMILY SSF50129 3 191 1.92E-72 T 12-10-2018 IPR011032 GroES-like superfamily vfu_A00515 32871e839db4c10812cabc842c2ec156 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.5E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 vfu_A00515 32871e839db4c10812cabc842c2ec156 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 3.5E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 vfu_A00515 32871e839db4c10812cabc842c2ec156 193 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.5E-21 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 vfu_A00515 32871e839db4c10812cabc842c2ec156 193 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00515 32871e839db4c10812cabc842c2ec156 193 Gene3D G3DSA:3.55.40.10 34 193 1.1E-43 T 12-10-2018 vfu_A00515 32871e839db4c10812cabc842c2ec156 193 SUPERFAMILY SSF54523 7 91 2.59E-6 T 12-10-2018 vfu_A00515 32871e839db4c10812cabc842c2ec156 193 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00515 32871e839db4c10812cabc842c2ec156 193 Pfam PF12019 Type II transport protein GspH 42 179 3.7E-10 T 12-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 vfu_A00515 32871e839db4c10812cabc842c2ec156 193 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 4.6E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00515 32871e839db4c10812cabc842c2ec156 193 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 183 2.5E-13 T 12-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 SMART SM00938 4 105 6.4E-68 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-46 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 12-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 52 75 1.7E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 23 41 1.7E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 2 17 1.7E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PRINTS PR00340 P-II protein signature 83 103 1.7E-40 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 PIRSF PIRSF039144 1 112 2.2E-55 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 SUPERFAMILY SSF54913 1 112 3.81E-45 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta vfu_A00901 3a4f1a228537eaa40fcabe2ed5ad66a2 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.0E-43 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 vfu_B00359 f130cb78ac83e20b3800b7cc0f83b0ea 365 Gene3D G3DSA:3.40.50.2300 180 359 9.1E-143 T 12-10-2018 vfu_B00359 f130cb78ac83e20b3800b7cc0f83b0ea 365 Gene3D G3DSA:3.40.50.2300 33 363 9.1E-143 T 12-10-2018 vfu_B00359 f130cb78ac83e20b3800b7cc0f83b0ea 365 Pfam PF13407 Periplasmic binding protein domain 69 328 2.0E-20 T 12-10-2018 IPR025997 Periplasmic binding protein vfu_B00359 f130cb78ac83e20b3800b7cc0f83b0ea 365 SUPERFAMILY SSF53822 27 364 1.91E-82 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A00630 2f4bae41b00b5e35cd72afbf3c81f97b 196 Pfam PF05137 Fimbrial assembly protein (PilN) 103 177 1.1E-13 T 12-10-2018 IPR007813 Fimbrial assembly PilN vfu_A00117 121518733696c24d071dc8369f2b4bad 57 SUPERFAMILY SSF51735 1 52 1.32E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00117 121518733696c24d071dc8369f2b4bad 57 Gene3D G3DSA:3.40.50.720 1 57 9.1E-7 T 12-10-2018 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 Pfam PF00072 Response regulator receiver domain 7 119 4.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 SUPERFAMILY SSF46894 140 211 5.44E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 SMART SM00448 5 118 7.4E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 5.4E-20 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 Gene3D G3DSA:3.40.50.12740 5 211 4.0E-66 T 12-10-2018 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 SUPERFAMILY SSF52172 4 134 3.13E-35 T 12-10-2018 IPR011006 CheY-like superfamily vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_A01759 e182d11aeb6b487e8a48b7f300e9fc33 212 SMART SM00421 148 205 2.7E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00749 6b18b60b2e8f198eb2a94f4681e4bbf2 137 Gene3D G3DSA:3.40.30.10 1 114 3.3E-30 T 12-10-2018 vfu_B00749 6b18b60b2e8f198eb2a94f4681e4bbf2 137 SUPERFAMILY SSF52833 2 117 1.99E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00749 6b18b60b2e8f198eb2a94f4681e4bbf2 137 Pfam PF01323 DSBA-like thioredoxin domain 3 111 3.8E-17 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 SMART SM00421 116 173 2.2E-13 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 Gene3D G3DSA:1.10.10.10 110 175 4.3E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 Pfam PF00196 Bacterial regulatory proteins, luxR family 119 171 1.1E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 Gene3D G3DSA:3.40.50.2300 2 109 9.8E-14 T 12-10-2018 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 161 2.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 133 149 2.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 119 133 2.4E-9 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 SUPERFAMILY SSF52172 6 108 2.56E-15 T 12-10-2018 IPR011006 CheY-like superfamily vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 SUPERFAMILY SSF46894 115 173 2.07E-15 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 ProSitePatterns PS00622 LuxR-type HTH domain signature. 133 160 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 vfu_B00140 bcb47f51b626aeab07b8c6b9f4f20144 177 Pfam PF00072 Response regulator receiver domain 7 95 1.2E-9 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 vfu_A00368 0966f420b46dfa1e5e9e3ae9529e85d8 649 Gene3D G3DSA:3.20.20.540 214 527 1.3E-154 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 vfu_A00368 0966f420b46dfa1e5e9e3ae9529e85d8 649 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.758 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 vfu_A00368 0966f420b46dfa1e5e9e3ae9529e85d8 649 Pfam PF13667 ThiC-associated domain 22 104 1.9E-32 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 vfu_A00368 0966f420b46dfa1e5e9e3ae9529e85d8 649 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 1.6E-218 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 vfu_A00368 0966f420b46dfa1e5e9e3ae9529e85d8 649 Pfam PF01964 Radical SAM ThiC family 144 592 6.4E-200 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 vfu_A01242 13617bd0fe8d26e7f34f3a8c9595c8b4 75 SMART SM00899 1 74 2.0E-22 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 vfu_A01242 13617bd0fe8d26e7f34f3a8c9595c8b4 75 Pfam PF04023 FeoA domain 1 73 3.8E-18 T 12-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 vfu_A01242 13617bd0fe8d26e7f34f3a8c9595c8b4 75 Gene3D G3DSA:2.30.30.90 1 75 4.1E-23 T 12-10-2018 IPR038157 Ferrous iron transporter, core domain vfu_A01242 13617bd0fe8d26e7f34f3a8c9595c8b4 75 SUPERFAMILY SSF50037 4 74 3.89E-18 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 SUPERFAMILY SSF51971 145 399 5.89E-68 T 12-10-2018 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 SUPERFAMILY SSF46548 6 157 1.26E-41 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.2E-38 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 2.1E-248 T 12-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 5.0E-37 T 12-10-2018 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 5.0E-37 T 12-10-2018 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 5.0E-37 T 12-10-2018 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 5.0E-37 T 12-10-2018 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 5.0E-37 T 12-10-2018 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:3.50.50.60 147 247 1.2E-9 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:3.50.50.60 248 398 2.1E-43 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 Gene3D G3DSA:1.10.1060.10 12 146 3.2E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 vfu_A02909 06f11d5972b207de5d987dd103a22ad0 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 6.2E-24 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 Gene3D G3DSA:1.10.40.30 84 154 2.3E-63 T 12-10-2018 vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 SUPERFAMILY SSF55729 185 305 4.9E-18 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 Pfam PF00583 Acetyltransferase (GNAT) family 221 298 1.5E-10 T 12-10-2018 IPR000182 GNAT domain vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 Gene3D G3DSA:1.20.200.10 1 167 2.3E-63 T 12-10-2018 vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 Gene3D G3DSA:3.40.630.30 184 327 4.4E-28 T 12-10-2018 vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 Pfam PF14698 Argininosuccinate lyase C-terminal 85 152 1.2E-25 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 vfu_A00624 07a7cdaf03bc471e1d23749bdee166e0 345 SUPERFAMILY SSF48557 1 179 8.48E-49 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_A02997 2bba11d7cc433850adfbc1208b30817f 147 Gene3D G3DSA:1.10.10.410 91 147 6.9E-19 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal vfu_A02997 2bba11d7cc433850adfbc1208b30817f 147 SUPERFAMILY SSF89095 1 146 2.41E-43 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 vfu_A02997 2bba11d7cc433850adfbc1208b30817f 147 Gene3D G3DSA:1.10.1510.10 1 90 6.6E-28 T 12-10-2018 vfu_A02997 2bba11d7cc433850adfbc1208b30817f 147 Pfam PF09424 Yqey-like protein 5 146 1.8E-56 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 vfu_A00114 19ca4248a5bcb0f1f6f311865a26b411 358 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 3 346 4.8E-157 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 vfu_A00114 19ca4248a5bcb0f1f6f311865a26b411 358 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 4 348 27.331 T 12-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 vfu_A00114 19ca4248a5bcb0f1f6f311865a26b411 358 Pfam PF00953 Glycosyl transferase family 4 71 226 1.6E-29 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 PIRSF PIRSF002741 18 503 5.6E-93 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 SUPERFAMILY SSF53850 26 516 1.39E-127 T 12-10-2018 vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 Gene3D G3DSA:3.90.76.10 57 165 1.3E-123 T 12-10-2018 vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 Gene3D G3DSA:3.10.105.10 279 494 1.3E-123 T 12-10-2018 vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 425 1.8E-83 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site vfu_A00246 b6df6c3af9da4617802f0bb13aba095e 518 Gene3D G3DSA:3.40.190.10 32 278 1.3E-123 T 12-10-2018 vfu_A01146 de1f32fa67b688493169e78baa26b216 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.389 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A01146 de1f32fa67b688493169e78baa26b216 283 Gene3D G3DSA:3.20.20.70 1 283 4.9E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A01146 de1f32fa67b688493169e78baa26b216 283 SUPERFAMILY SSF51569 2 278 4.21E-105 T 12-10-2018 vfu_A01146 de1f32fa67b688493169e78baa26b216 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.9E-117 T 12-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_A01146 de1f32fa67b688493169e78baa26b216 283 Pfam PF00793 DAHP synthetase I family 10 275 5.5E-70 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 vfu_B00789 5b261013db0ba0baa2a5639d7f9e0997 591 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 589 3.1E-105 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like vfu_B00789 5b261013db0ba0baa2a5639d7f9e0997 591 Pfam PF05947 Type VI secretion system, TssF 6 588 1.3E-126 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 Gene3D G3DSA:1.10.490.10 12 166 1.1E-30 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 SMART SM00471 187 324 2.4E-5 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 Pfam PF13487 HD domain 242 305 3.7E-15 T 12-10-2018 vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 Gene3D G3DSA:1.10.3210.10 167 368 4.2E-72 T 12-10-2018 vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 Pfam PF11563 Protoglobin 12 164 2.8E-33 T 12-10-2018 vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 SUPERFAMILY SSF46458 15 157 6.23E-24 T 12-10-2018 IPR009050 Globin-like superfamily vfu_B00635 e1a8f928e001a4d3da4ec1f97efe5a33 375 SUPERFAMILY SSF109604 167 355 2.64E-41 T 12-10-2018 vfu_A01055 f26dc72787131fbd793b296187fb4fdb 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 30.588 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 vfu_A01055 f26dc72787131fbd793b296187fb4fdb 129 Gene3D G3DSA:3.30.310.230 2 129 5.7E-45 T 12-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 vfu_A01055 f26dc72787131fbd793b296187fb4fdb 129 Pfam PF07417 Transcriptional regulator Crl 6 123 1.1E-49 T 12-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 vfu_A00891 8ba2b134378043e3ac72b156dfd64af9 169 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 2.7E-46 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A00891 8ba2b134378043e3ac72b156dfd64af9 169 Gene3D G3DSA:3.30.70.560 1 159 1.3E-57 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A00891 8ba2b134378043e3ac72b156dfd64af9 169 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 5.8E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A00891 8ba2b134378043e3ac72b156dfd64af9 169 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A00891 8ba2b134378043e3ac72b156dfd64af9 169 SUPERFAMILY SSF55083 1 157 7.72E-54 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 vfu_A00432 78f8829af3d897cdea4bcf8aea6e226e 242 Gene3D G3DSA:3.40.50.10090 34 158 1.0E-67 T 12-10-2018 vfu_A00432 78f8829af3d897cdea4bcf8aea6e226e 242 Gene3D G3DSA:3.40.50.10090 4 232 1.0E-67 T 12-10-2018 vfu_A00432 78f8829af3d897cdea4bcf8aea6e226e 242 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 1.6E-33 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_A00432 78f8829af3d897cdea4bcf8aea6e226e 242 SUPERFAMILY SSF69618 1 241 1.83E-52 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 vfu_B01144 3b8452f36ff92ef567e2faf557e6dfad 124 SUPERFAMILY SSF52821 29 116 1.09E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B01144 3b8452f36ff92ef567e2faf557e6dfad 124 Gene3D G3DSA:3.40.250.10 27 121 7.0E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily vfu_B01144 3b8452f36ff92ef567e2faf557e6dfad 124 SMART SM00450 25 119 1.7E-25 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B01144 3b8452f36ff92ef567e2faf557e6dfad 124 Pfam PF00581 Rhodanese-like domain 30 106 7.4E-16 T 12-10-2018 IPR001763 Rhodanese-like domain vfu_B00508 b1fd759f3020c74042441358e5fcbb4b 114 Pfam PF08888 HopJ type III effector protein 4 111 1.7E-50 T 12-10-2018 IPR014984 HopJ type III effector protein vfu_B00508 b1fd759f3020c74042441358e5fcbb4b 114 Gene3D G3DSA:3.20.160.10 1 114 2.1E-52 T 12-10-2018 IPR038604 Type III effector HopJ superfamily vfu_A00727 569144fc9bcce1977ec47cea0bca1c22 447 SUPERFAMILY SSF111283 13 447 4.05E-128 T 12-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 vfu_A00727 569144fc9bcce1977ec47cea0bca1c22 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 6.6E-62 T 12-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 vfu_A00727 569144fc9bcce1977ec47cea0bca1c22 447 Gene3D G3DSA:3.30.2290.10 3 233 1.2E-83 T 12-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal vfu_A02749 515d53835b8dd4985bb35b18a21141c7 347 SUPERFAMILY SSF49401 207 346 8.95E-10 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_A02749 515d53835b8dd4985bb35b18a21141c7 347 Gene3D G3DSA:2.60.40.1090 211 346 3.7E-7 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_A03106 9ce8788fec67faf3774233341a3caa78 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03106 9ce8788fec67faf3774233341a3caa78 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.8E-5 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A03106 9ce8788fec67faf3774233341a3caa78 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 26 5.8E-4 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_B00838 d114721cd77bba1e8a061e01f16bd65b 320 SUPERFAMILY SSF81345 6 318 2.48E-84 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00838 d114721cd77bba1e8a061e01f16bd65b 320 Pfam PF01032 FecCD transport family 14 318 3.4E-93 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B00838 d114721cd77bba1e8a061e01f16bd65b 320 Gene3D G3DSA:1.10.3470.10 4 320 1.8E-97 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00211 c09feb27fbacf1e55ada82ed5d13b01c 140 Pfam PF12375 Phage protein 55 122 8.5E-24 T 12-10-2018 IPR021077 Bacteriophage phi-Lf, Orf112 vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 Gene3D G3DSA:2.30.330.10 44 136 1.0E-33 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A01198 03421bc84355bbd358748acc9bfdcb89 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.1E-19 T 12-10-2018 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 6.1E-19 T 12-10-2018 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 6.1E-19 T 12-10-2018 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 6.1E-19 T 12-10-2018 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 Gene3D G3DSA:3.50.50.60 6 339 1.1E-119 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 12-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 SUPERFAMILY SSF51905 5 385 9.33E-58 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 3.2E-135 T 12-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 Pfam PF01494 FAD binding domain 5 348 4.4E-25 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 vfu_A00822 d01d60862ea9856694cc4dd468eb8ffe 409 Gene3D G3DSA:3.30.9.50 80 270 1.1E-119 T 12-10-2018 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 644 746 5.42E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 150 265 1.3E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 275 377 7.99E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 535 624 6.57E-8 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Pfam PF08548 Peptidase M10 serralysin C terminal 1185 1242 1.1E-7 T 12-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 677 768 5.3E-5 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 185 276 0.028 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 308 399 0.0084 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 791 880 2.0E-5 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 554 645 0.0043 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SMART SM00112 431 522 0.017 T 12-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 398 503 2.14E-7 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 766 873 8.0E-14 T 12-10-2018 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 SUPERFAMILY SSF49313 764 867 1.57E-11 T 12-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 532 641 4.8E-12 T 12-10-2018 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 655 765 4.1E-12 T 12-10-2018 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 286 395 6.3E-12 T 12-10-2018 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 409 518 2.1E-11 T 12-10-2018 vfu_A01723 538c5071b8b5ad3c9ed1575aaa71edf9 1297 Gene3D G3DSA:2.60.40.60 164 271 1.0E-11 T 12-10-2018 vfu_A01861 d9bdff102a4d51ad66e8e8fbe1ed7b53 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 1.0E-41 T 12-10-2018 IPR020979 Uncharacterised protein family A0KLC6 vfu_B01132 f13ee228eecae1236d107ac2a8968a13 156 Pfam PF03928 Haem-degrading 20 147 2.9E-31 T 12-10-2018 IPR005624 Haem-degrading vfu_B01132 f13ee228eecae1236d107ac2a8968a13 156 SUPERFAMILY SSF143744 11 149 4.18E-26 T 12-10-2018 IPR038084 GlcG-like domain superfamily vfu_B01132 f13ee228eecae1236d107ac2a8968a13 156 Gene3D G3DSA:3.30.450.150 1 155 4.3E-49 T 12-10-2018 IPR038084 GlcG-like domain superfamily vfu_B01132 f13ee228eecae1236d107ac2a8968a13 156 PIRSF PIRSF008757 1 156 2.8E-53 T 12-10-2018 IPR010371 Uncharacterised protein family UPF0303 vfu_B01424 cdf68cfadb6af3319ab2d488e7da4fce 284 Gene3D G3DSA:1.10.12.10 209 272 1.1E-21 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal vfu_B01424 cdf68cfadb6af3319ab2d488e7da4fce 284 SUPERFAMILY SSF52096 6 265 2.2E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01424 cdf68cfadb6af3319ab2d488e7da4fce 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 265 2.2E-45 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 vfu_B01424 cdf68cfadb6af3319ab2d488e7da4fce 284 Gene3D G3DSA:3.90.226.10 5 208 2.0E-59 T 12-10-2018 vfu_A01974 7a3ce94ca246a571c9441a328cc4cb4a 135 Pfam PF00561 alpha/beta hydrolase fold 56 121 1.1E-8 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A01974 7a3ce94ca246a571c9441a328cc4cb4a 135 Gene3D G3DSA:3.40.50.1820 3 134 2.7E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01974 7a3ce94ca246a571c9441a328cc4cb4a 135 SUPERFAMILY SSF53474 9 134 8.29E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02112 732097d03a586119d827f4db8726c87b 203 Pfam PF01613 Flavin reductase like domain 22 163 4.0E-17 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 vfu_A02112 732097d03a586119d827f4db8726c87b 203 SMART SM00903 19 167 7.8E-5 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 vfu_A02112 732097d03a586119d827f4db8726c87b 203 SUPERFAMILY SSF50475 1 198 1.13E-35 T 12-10-2018 vfu_A02112 732097d03a586119d827f4db8726c87b 203 Gene3D G3DSA:2.30.110.10 1 203 4.3E-60 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 vfu_A02993 cffb2b2c84d94d16fa42759e4e19106c 201 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 184 4.6E-51 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 vfu_A02993 cffb2b2c84d94d16fa42759e4e19106c 201 SMART SM01207 10 185 7.1E-84 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 vfu_A02993 cffb2b2c84d94d16fa42759e4e19106c 201 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 9.8E-75 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 vfu_A02993 cffb2b2c84d94d16fa42759e4e19106c 201 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.249 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 12-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 Gene3D G3DSA:3.20.20.10 35 277 1.7E-151 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 8.8E-27 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.6E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.6E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.6E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.6E-28 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 Gene3D G3DSA:2.40.37.10 17 404 1.7E-151 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 5.4E-73 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.811 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 9.9E-168 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 SUPERFAMILY SSF50621 259 414 5.44E-52 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 vfu_A00438 9d1fe0dffb1742e661fffa6c033e8c6e 417 SUPERFAMILY SSF51419 27 284 1.18E-80 T 12-10-2018 IPR029066 PLP-binding barrel vfu_A02020 6cb609c4d5d6d96df5f2f71819bd6758 86 Gene3D G3DSA:1.10.760.10 3 72 1.9E-6 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 PIRSF PIRSF001217 8 616 6.9E-224 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 3.6E-191 T 12-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.90.226.10 315 540 6.8E-162 T 12-10-2018 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.90.226.10 94 314 6.8E-162 T 12-10-2018 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 SUPERFAMILY SSF52096 53 284 3.38E-28 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 Gene3D G3DSA:3.40.1750.10 186 497 6.8E-162 T 12-10-2018 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 SUPERFAMILY SSF52096 324 529 2.98E-42 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 Pfam PF01343 Peptidase family S49 391 541 5.6E-45 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 Pfam PF01343 Peptidase family S49 138 293 2.4E-31 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 vfu_A02483 22d689a31c4695d0359e72e0c6756824 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 3.8E-55 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 vfu_A00448 1e655ac586ec6d70d1d0c285c6f9972f 326 Pfam PF12146 Serine aminopeptidase, S33 48 305 8.0E-58 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 vfu_A00448 1e655ac586ec6d70d1d0c285c6f9972f 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 143 5.4E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A00448 1e655ac586ec6d70d1d0c285c6f9972f 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 258 272 5.4E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A00448 1e655ac586ec6d70d1d0c285c6f9972f 326 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 92 5.4E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A00448 1e655ac586ec6d70d1d0c285c6f9972f 326 Gene3D G3DSA:3.40.50.1820 22 324 1.6E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00448 1e655ac586ec6d70d1d0c285c6f9972f 326 SUPERFAMILY SSF53474 33 316 3.85E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01361 7c7903b363dd79f63714868407a60315 261 SUPERFAMILY SSF117143 92 222 2.09E-35 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A01361 7c7903b363dd79f63714868407a60315 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A01361 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 6.0E-32 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01361 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.1E-45 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01361 7c7903b363dd79f63714868407a60315 261 Pfam PF00460 Flagella basal body rod protein 5 35 4.6E-11 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01361 7c7903b363dd79f63714868407a60315 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 5.9E-117 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 vfu_A01361 7c7903b363dd79f63714868407a60315 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 258 7.8E-27 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 9.2E-76 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 SUPERFAMILY SSF109755 10 226 4.29E-70 T 12-10-2018 vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 Gene3D G3DSA:1.20.58.220 119 228 1.3E-34 T 12-10-2018 IPR038078 PhoU-like domain superfamily vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 Pfam PF01895 PhoU domain 128 210 1.3E-16 T 12-10-2018 IPR026022 PhoU domain vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 Pfam PF01895 PhoU domain 23 108 7.4E-22 T 12-10-2018 IPR026022 PhoU domain vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 PIRSF PIRSF003107 4 223 5.3E-70 T 12-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 vfu_A02805 934a692f0eaaf873d517a1612c130a34 232 Gene3D G3DSA:1.20.58.220 1 118 4.2E-40 T 12-10-2018 IPR038078 PhoU-like domain superfamily vfu_B00046 2dd35bed6bf87411477ec5ff7d887df1 107 Pfam PF13473 Cupredoxin-like domain 8 106 2.1E-25 T 12-10-2018 IPR028096 EfeO-type cupredoxin-like domain vfu_B00046 2dd35bed6bf87411477ec5ff7d887df1 107 Gene3D G3DSA:2.60.40.420 13 107 1.2E-21 T 12-10-2018 IPR008972 Cupredoxin vfu_B00046 2dd35bed6bf87411477ec5ff7d887df1 107 SUPERFAMILY SSF49503 6 107 3.93E-15 T 12-10-2018 IPR008972 Cupredoxin vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 2.0E-24 T 12-10-2018 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 1.7E-91 T 12-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 Gene3D G3DSA:3.40.50.1000 5 218 4.0E-63 T 12-10-2018 IPR023214 HAD superfamily vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 94 195 6.2E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 3.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 3.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 3.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.0E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 SUPERFAMILY SSF56784 2 222 2.03E-49 T 12-10-2018 IPR036412 HAD-like superfamily vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 Gene3D G3DSA:1.10.150.240 16 95 4.0E-63 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_B00111 b4cc58e71183f5567c15c90534703c81 224 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 189 5.6E-16 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 Pfam PF13437 HlyD family secretion protein 268 385 4.7E-14 T 12-10-2018 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 Gene3D G3DSA:1.10.287.470 105 267 3.9E-19 T 12-10-2018 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 SUPERFAMILY SSF51230 263 296 6.41E-6 T 12-10-2018 IPR011053 Single hybrid motif vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 83 103 8.8E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 279 300 8.8E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 313 337 8.8E-15 T 12-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 Gene3D G3DSA:2.40.50.100 71 304 3.9E-19 T 12-10-2018 vfu_B00741 156fed389711d8f432d2bf536fa19ebf 428 Gene3D G3DSA:2.40.30.170 64 409 3.9E-19 T 12-10-2018 vfu_A01633 0e15fd741ae634844138756db9780961 247 SUPERFAMILY SSF50630 107 241 1.13E-41 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily vfu_A01633 0e15fd741ae634844138756db9780961 247 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 7.4E-48 T 12-10-2018 vfu_A01633 0e15fd741ae634844138756db9780961 247 Gene3D G3DSA:2.40.70.10 104 234 3.2E-42 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily vfu_B00419 4156ac426ad9cad0f80c9d3cc797a053 366 SUPERFAMILY SSF53756 1 365 8.37E-64 T 12-10-2018 vfu_B00419 4156ac426ad9cad0f80c9d3cc797a053 366 Pfam PF00534 Glycosyl transferases group 1 197 341 3.5E-22 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_B00419 4156ac426ad9cad0f80c9d3cc797a053 366 Gene3D G3DSA:3.40.50.2000 1 179 2.3E-22 T 12-10-2018 vfu_B00419 4156ac426ad9cad0f80c9d3cc797a053 366 Gene3D G3DSA:3.40.50.2000 180 364 1.9E-32 T 12-10-2018 vfu_B00419 4156ac426ad9cad0f80c9d3cc797a053 366 Pfam PF13439 Glycosyltransferase Family 4 16 174 8.9E-19 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 vfu_B00382 c15964171ef974946653ddaa8ac71657 348 Pfam PF04865 Baseplate J-like protein 61 291 2.9E-36 T 12-10-2018 IPR006949 Baseplate protein J-like vfu_A01455 3501f65314a54aa4c0d375a58f48011d 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 216 8.2E-43 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_A01455 3501f65314a54aa4c0d375a58f48011d 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 3.9E-97 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.1E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.4E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 Pfam PF03466 LysR substrate binding domain 93 291 1.9E-36 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 Gene3D G3DSA:1.10.10.10 3 94 5.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 SUPERFAMILY SSF53850 93 294 1.81E-35 T 12-10-2018 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 Gene3D G3DSA:3.40.190.290 95 295 5.7E-42 T 12-10-2018 vfu_B00889 2ce2bffc7cbe877c154de4744c776f89 308 SUPERFAMILY SSF46785 3 83 2.28E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00506 b93b58a688d9f26c750003b9f16c9f5d 80 Pfam PF14375 Cysteine-rich CWC 31 75 8.1E-8 T 12-10-2018 IPR032720 Cysteine-rich CWC vfu_B00506 b93b58a688d9f26c750003b9f16c9f5d 80 Pfam PF06945 Protein of unknown function (DUF1289) 1 24 2.5E-4 T 12-10-2018 IPR010710 Protein of unknown function DUF1289 vfu_B00145 89637e3437f7f6821532642e4aaf2e67 787 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 786 2.6E-292 T 12-10-2018 IPR010706 Fatty acid cis-trans isomerase vfu_A02123 2470b059734638ed5fb3ee692bb1b652 226 Pfam PF04172 LrgB-like family 6 217 1.1E-72 T 12-10-2018 IPR007300 CidB/LrgB family vfu_A00289 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 SUPERFAMILY SSF55021 3 74 1.54E-10 T 12-10-2018 vfu_A00289 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 Gene3D G3DSA:3.30.70.260 1 89 1.8E-11 T 12-10-2018 vfu_A00289 515f8a6ec1ed2972bcd6f13ff9ea35b3 94 Pfam PF13710 ACT domain 12 73 1.2E-21 T 12-10-2018 vfu_B01489 598125a322d8397fea4c4e63cbfc3e2b 352 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 311 2.5E-43 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_B01489 598125a322d8397fea4c4e63cbfc3e2b 352 PIRSF PIRSF039026 2 348 7.3E-100 T 12-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like vfu_B01489 598125a322d8397fea4c4e63cbfc3e2b 352 Gene3D G3DSA:3.40.190.10 149 319 3.1E-97 T 12-10-2018 vfu_B01489 598125a322d8397fea4c4e63cbfc3e2b 352 Gene3D G3DSA:3.40.190.170 29 333 3.1E-97 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Pfam PF03958 Bacterial type II/III secretion system short domain 267 346 3.8E-17 T 12-10-2018 IPR005644 NolW-like vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Pfam PF03958 Bacterial type II/III secretion system short domain 126 188 1.8E-8 T 12-10-2018 IPR005644 NolW-like vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 4.6E-16 T 12-10-2018 IPR005644 NolW-like vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Gene3D G3DSA:3.30.1370.120 21 186 3.1E-53 T 12-10-2018 IPR038591 NolW-like superfamily vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 622 2.2E-161 T 12-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Gene3D G3DSA:3.30.1370.120 189 259 8.0E-22 T 12-10-2018 IPR038591 NolW-like superfamily vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 577 595 9.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 471 9.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 600 614 9.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 346 356 9.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 9.8E-37 T 12-10-2018 IPR001775 GspD/PilQ family vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Gene3D G3DSA:3.30.1370.120 264 344 3.0E-16 T 12-10-2018 IPR038591 NolW-like superfamily vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 Pfam PF00263 Bacterial type II and III secretion system protein 451 613 6.0E-51 T 12-10-2018 IPR004846 Type II/III secretion system GO:0009306 vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 558 591 - T 12-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR01032 Gene IV protein signature 593 615 1.4E-11 T 12-10-2018 vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR01032 Gene IV protein signature 540 568 1.4E-11 T 12-10-2018 vfu_A00510 70c9de9e5a452fca114d7634959d054f 675 PRINTS PR01032 Gene IV protein signature 472 495 1.4E-11 T 12-10-2018 vfu_B00875 c094a506824b6360c6ca5eec75a4c6f8 101 Pfam PF04519 Polymer-forming cytoskeletal 2 76 1.7E-20 T 12-10-2018 IPR007607 Bactofilin A/B vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.50.740 564 708 6.9E-11 T 12-10-2018 vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 SUPERFAMILY SSF53706 69 900 2.17E-117 T 12-10-2018 vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 SMART SM00926 72 154 1.0E-12 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 Pfam PF00384 Molybdopterin oxidoreductase 244 693 1.2E-21 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 SUPERFAMILY SSF50692 881 1007 1.67E-24 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:3.40.50.740 157 187 3.2E-6 T 12-10-2018 vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 Pfam PF01568 Molydopterin dinucleotide binding domain 898 986 3.3E-13 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 vfu_A01449 55906413f21fb4ff5498dd45e07688a7 1030 Gene3D G3DSA:2.40.40.20 858 1001 6.0E-25 T 12-10-2018 vfu_A01238 39cd034f3c302e0319528b829734dfa4 260 SUPERFAMILY SSF81345 2 253 1.44E-38 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A01238 39cd034f3c302e0319528b829734dfa4 260 Pfam PF00950 ABC 3 transport family 1 257 2.9E-76 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 vfu_A01238 39cd034f3c302e0319528b829734dfa4 260 Gene3D G3DSA:1.10.3470.10 28 254 2.0E-8 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B01234 962ad1ed4536286c61d5d9749f41fa4b 108 Gene3D G3DSA:3.30.70.100 3 101 8.1E-37 T 12-10-2018 vfu_B01234 962ad1ed4536286c61d5d9749f41fa4b 108 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 5 108 29.969 T 12-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 vfu_B01234 962ad1ed4536286c61d5d9749f41fa4b 108 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 7 107 5.2E-44 T 12-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 vfu_B01234 962ad1ed4536286c61d5d9749f41fa4b 108 Pfam PF05336 L-rhamnose mutarotase 7 106 3.1E-29 T 12-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 vfu_B01234 962ad1ed4536286c61d5d9749f41fa4b 108 SUPERFAMILY SSF54909 7 107 8.67E-37 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A00262 d58e02ad709295a966668f0866cc035c 88 Gene3D G3DSA:3.30.160.140 1 88 4.0E-33 T 12-10-2018 IPR036692 Shew3726-like superfamily vfu_A00262 d58e02ad709295a966668f0866cc035c 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 4.1E-24 T 12-10-2018 IPR009962 Protein of unknown function DUF1488 vfu_A00262 d58e02ad709295a966668f0866cc035c 88 SUPERFAMILY SSF160272 1 86 1.02E-28 T 12-10-2018 IPR036692 Shew3726-like superfamily vfu_A01010 ab56e191a7e81b437eeab0f4d8d050ec 328 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 189 296 4.9E-18 T 12-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 vfu_A01010 ab56e191a7e81b437eeab0f4d8d050ec 328 Gene3D G3DSA:2.60.120.330 19 328 3.4E-82 T 12-10-2018 IPR027443 Isopenicillin N synthase-like vfu_A01010 ab56e191a7e81b437eeab0f4d8d050ec 328 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 29 125 2.7E-21 T 12-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain vfu_A01010 ab56e191a7e81b437eeab0f4d8d050ec 328 SUPERFAMILY SSF51197 26 327 3.57E-74 T 12-10-2018 vfu_B00355 bacf6ffbdc21bdfcf08cd237b5006604 123 Gene3D G3DSA:2.40.50.200 19 123 1.3E-18 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily vfu_B00355 bacf6ffbdc21bdfcf08cd237b5006604 123 Pfam PF04076 Bacterial OB fold (BOF) protein 52 121 2.4E-9 T 12-10-2018 IPR005220 Bacterial OB-fold vfu_B00355 bacf6ffbdc21bdfcf08cd237b5006604 123 SUPERFAMILY SSF101756 23 123 2.48E-23 T 12-10-2018 IPR036700 Bacterial OB-fold superfamily vfu_A03032 5db48d126387ae3e06264a7617cda09e 208 Pfam PF01810 LysE type translocator 15 199 1.5E-41 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A00330 11d9c15335f21a5400956c96ab742581 543 Pfam PF00171 Aldehyde dehydrogenase family 12 272 8.7E-28 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 vfu_A00330 11d9c15335f21a5400956c96ab742581 543 Gene3D G3DSA:3.40.605.10 14 444 4.3E-174 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_A00330 11d9c15335f21a5400956c96ab742581 543 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 4 461 3.3E-213 T 12-10-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating vfu_A00330 11d9c15335f21a5400956c96ab742581 543 Gene3D G3DSA:3.40.309.10 222 406 4.3E-174 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 vfu_A00330 11d9c15335f21a5400956c96ab742581 543 SUPERFAMILY SSF53720 10 451 9.82E-81 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B00304 700da3ccead8aaff4754f66607f99730 389 SUPERFAMILY SSF103473 2 381 3.14E-38 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00304 700da3ccead8aaff4754f66607f99730 389 Pfam PF07690 Major Facilitator Superfamily 213 380 4.3E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00304 700da3ccead8aaff4754f66607f99730 389 Gene3D G3DSA:1.20.1250.20 1 382 2.7E-37 T 12-10-2018 vfu_A01805 544e206de2921218c99f4edcb9f63828 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 7.5E-48 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_A00642 98e3a399d435b3d64fca12cfedd4c501 877 SUPERFAMILY SSF74853 41 131 1.15E-5 T 12-10-2018 IPR036415 Lamin tail domain superfamily vfu_A00642 98e3a399d435b3d64fca12cfedd4c501 877 Pfam PF00932 Lamin Tail Domain 26 134 1.3E-13 T 12-10-2018 IPR001322 Lamin tail domain vfu_A00642 98e3a399d435b3d64fca12cfedd4c501 877 SUPERFAMILY SSF56219 474 848 2.02E-29 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 Gene3D G3DSA:3.30.470.80 182 299 2.4E-43 T 12-10-2018 vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 3.9E-89 T 12-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 Gene3D G3DSA:3.30.1490.20 115 181 1.7E-26 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.889 T 12-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 6.8E-69 T 12-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 Gene3D G3DSA:3.40.50.20 1 114 4.7E-40 T 12-10-2018 vfu_A01042 878815c9ed028c6306d2ae3583c68bec 301 SUPERFAMILY SSF56059 98 288 5.58E-50 T 12-10-2018 vfu_B00753 aef37a911a1bab9f4c977e955ca00bf5 159 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 6.7E-22 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 vfu_B00753 aef37a911a1bab9f4c977e955ca00bf5 159 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 5.1E-21 T 12-10-2018 IPR009921 Domain of unknown function DUF1456 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 Gene3D G3DSA:1.10.287.610 103 150 1.1E-92 T 12-10-2018 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 SUPERFAMILY SSF52313 6 230 1.57E-96 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.4E-108 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 Pfam PF00318 Ribosomal protein S2 9 224 5.3E-95 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.9E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.9E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.9E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.9E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.9E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.9E-38 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.35 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A01069 6b3608ba9bc795e94869f364cd7d8b55 242 Gene3D G3DSA:3.40.50.10490 8 219 1.1E-92 T 12-10-2018 vfu_B00657 36818f9b629a744440e5dbec0a641dd3 227 Pfam PF14518 Iron-containing redox enzyme 40 211 1.4E-23 T 12-10-2018 vfu_B00657 36818f9b629a744440e5dbec0a641dd3 227 SMART SM01236 73 175 1.4E-4 T 12-10-2018 vfu_B00657 36818f9b629a744440e5dbec0a641dd3 227 Gene3D G3DSA:1.20.910.10 4 225 8.1E-56 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 vfu_B00657 36818f9b629a744440e5dbec0a641dd3 227 SUPERFAMILY SSF48613 2 219 1.02E-60 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 vfu_A01644 e6720c6998e1c6e3a9e8429dc3041b65 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 279 5.3E-81 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 vfu_A01644 e6720c6998e1c6e3a9e8429dc3041b65 280 Pfam PF01226 Formate/nitrite transporter 13 275 1.4E-77 T 12-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 vfu_A01644 e6720c6998e1c6e3a9e8429dc3041b65 280 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site vfu_A01644 e6720c6998e1c6e3a9e8429dc3041b65 280 Gene3D G3DSA:1.20.1080.10 27 280 1.2E-99 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 vfu_A01644 e6720c6998e1c6e3a9e8429dc3041b65 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 12-10-2018 IPR024002 Formate/nitrite transporter, conserved site vfu_A01644 e6720c6998e1c6e3a9e8429dc3041b65 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 1.6E-113 T 12-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 vfu_B01369 ad2f36cf187cdbd8585073958c08b209 414 Pfam PF00294 pfkB family carbohydrate kinase 120 273 9.2E-11 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB vfu_B01369 ad2f36cf187cdbd8585073958c08b209 414 SUPERFAMILY SSF53613 13 397 7.09E-43 T 12-10-2018 IPR029056 Ribokinase-like vfu_B00318 a743a45211dfd43c08a4e3ea68872d80 592 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 1.3E-72 T 12-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 vfu_B00318 a743a45211dfd43c08a4e3ea68872d80 592 Gene3D G3DSA:3.40.50.1820 223 514 4.1E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00318 a743a45211dfd43c08a4e3ea68872d80 592 SUPERFAMILY SSF53474 226 516 4.01E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_B00318 a743a45211dfd43c08a4e3ea68872d80 592 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 4.8E-255 T 12-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 SUPERFAMILY SSF88659 98 165 1.0E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 Gene3D G3DSA:1.20.140.160 96 229 1.9E-18 T 12-10-2018 vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 Pfam PF04545 Sigma-70, region 4 178 225 6.9E-7 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 Gene3D G3DSA:1.10.1740.10 11 94 1.2E-6 T 12-10-2018 vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 SUPERFAMILY SSF88946 22 95 2.75E-7 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 SUPERFAMILY SSF88659 150 229 1.18E-9 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A02234 2ad7b281b003f3e3a790b0fa24c96b3a 231 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 228 7.5E-17 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A00443 2c4d9d53e3d4792a92afea68e099e4e4 455 SMART SM01204 220 345 2.7E-6 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 vfu_A00443 2c4d9d53e3d4792a92afea68e099e4e4 455 SMART SM00897 31 219 6.0E-27 T 12-10-2018 IPR013702 FIST domain, N-terminal vfu_A00443 2c4d9d53e3d4792a92afea68e099e4e4 455 Pfam PF08495 FIST N domain 33 218 6.1E-29 T 12-10-2018 IPR013702 FIST domain, N-terminal vfu_A00443 2c4d9d53e3d4792a92afea68e099e4e4 455 Pfam PF10442 FIST C domain 222 342 3.6E-8 T 12-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 vfu_A00608 2da9a1ca9676bffa8de1e6b468689cb7 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 25.027 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 vfu_A00608 2da9a1ca9676bffa8de1e6b468689cb7 120 PIRSF PIRSF000179 1 120 2.0E-57 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 vfu_A00608 2da9a1ca9676bffa8de1e6b468689cb7 120 Gene3D G3DSA:1.20.1300.10 1 120 3.2E-46 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00608 2da9a1ca9676bffa8de1e6b468689cb7 120 Pfam PF02313 Fumarate reductase subunit D 6 118 1.6E-46 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 vfu_A00608 2da9a1ca9676bffa8de1e6b468689cb7 120 SUPERFAMILY SSF81343 2 120 1.5E-51 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 vfu_A00608 2da9a1ca9676bffa8de1e6b468689cb7 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 116 2.0E-56 T 12-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 vfu_B00484 22ebaee15668607fdd1fec71554933c4 444 Gene3D G3DSA:2.40.50.140 378 444 3.0E-15 T 12-10-2018 vfu_B00484 22ebaee15668607fdd1fec71554933c4 444 Pfam PF01957 NfeD-like C-terminal, partner-binding 308 444 1.3E-35 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain vfu_B00484 22ebaee15668607fdd1fec71554933c4 444 SUPERFAMILY SSF141322 381 443 1.57E-14 T 12-10-2018 vfu_B00484 22ebaee15668607fdd1fec71554933c4 444 Gene3D G3DSA:3.90.226.10 27 259 7.0E-58 T 12-10-2018 vfu_B00484 22ebaee15668607fdd1fec71554933c4 444 SUPERFAMILY SSF52096 33 207 5.21E-26 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 4.7E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 149 244 4.0E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.5E-40 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 4.0E-117 T 12-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.1E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01126 8431671a40aa9c02a960d3ce05ff7169 262 SUPERFAMILY SSF117143 92 223 1.24E-34 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like vfu_A00393 0b688ba05876de01921e6b2526897202 91 Pfam PF10625 Universal stress protein B (UspB) 1 91 9.8E-44 T 12-10-2018 IPR019598 Universal stress protein B vfu_A00340 2702d3ecf59040dafa36b3f70dab2e06 211 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 208 4.6E-55 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 vfu_A00340 2702d3ecf59040dafa36b3f70dab2e06 211 Gene3D G3DSA:3.40.50.150 5 210 1.8E-64 T 12-10-2018 vfu_A00340 2702d3ecf59040dafa36b3f70dab2e06 211 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 206 28.204 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 vfu_A00340 2702d3ecf59040dafa36b3f70dab2e06 211 SUPERFAMILY SSF53335 10 209 1.69E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00340 2702d3ecf59040dafa36b3f70dab2e06 211 Pfam PF02527 rRNA small subunit methyltransferase G 23 205 6.4E-60 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 vfu_A00340 2702d3ecf59040dafa36b3f70dab2e06 211 PIRSF PIRSF003078 1 210 1.3E-57 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 vfu_A00426 bfbfa056afcd62d9f94868bd7dfff45a 212 SUPERFAMILY SSF53335 46 198 3.13E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00426 bfbfa056afcd62d9f94868bd7dfff45a 212 Pfam PF13489 Methyltransferase domain 62 197 2.3E-20 T 12-10-2018 vfu_A00426 bfbfa056afcd62d9f94868bd7dfff45a 212 Gene3D G3DSA:3.40.50.150 42 203 9.7E-15 T 12-10-2018 vfu_B01506 ef07f9c7f893cfb7671862af701c4b24 147 Pfam PF07883 Cupin domain 56 116 1.5E-7 T 12-10-2018 IPR013096 Cupin 2, conserved barrel vfu_B01506 ef07f9c7f893cfb7671862af701c4b24 147 Gene3D G3DSA:2.60.120.10 14 147 8.4E-46 T 12-10-2018 IPR014710 RmlC-like jelly roll fold vfu_B01506 ef07f9c7f893cfb7671862af701c4b24 147 SUPERFAMILY SSF51182 24 146 4.15E-29 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily vfu_B01321 281069be078caf08bc106103b3ff8d86 313 Pfam PF16868 NMT1-like family 27 307 3.9E-74 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family vfu_B01321 281069be078caf08bc106103b3ff8d86 313 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 18 307 7.9E-76 T 12-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family vfu_B01321 281069be078caf08bc106103b3ff8d86 313 Gene3D G3DSA:3.40.190.10 109 245 4.7E-81 T 12-10-2018 vfu_B01321 281069be078caf08bc106103b3ff8d86 313 Gene3D G3DSA:3.40.190.10 27 306 4.7E-81 T 12-10-2018 vfu_B01321 281069be078caf08bc106103b3ff8d86 313 SUPERFAMILY SSF53850 23 306 3.79E-61 T 12-10-2018 vfu_B01223 3110da0f843ade463140898d8b7cf11f 303 SUPERFAMILY SSF161098 26 303 8.9E-68 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01223 3110da0f843ade463140898d8b7cf11f 303 Gene3D G3DSA:1.10.3720.10 21 294 6.0E-61 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01223 3110da0f843ade463140898d8b7cf11f 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 296 1.9E-12 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 Pfam PF00425 chorismate binding enzyme 199 451 1.4E-92 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 116 453 1.4E-120 T 12-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 Gene3D G3DSA:3.60.120.10 13 460 2.6E-165 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 PRINTS PR00095 Anthranilate synthase component I signature 313 326 3.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 PRINTS PR00095 Anthranilate synthase component I signature 299 312 3.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 PRINTS PR00095 Anthranilate synthase component I signature 393 407 3.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 PRINTS PR00095 Anthranilate synthase component I signature 408 422 3.2E-17 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 161 1.9E-28 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 vfu_A01782 21fc1c21f85847a8b679247f803ca7f2 461 SUPERFAMILY SSF56322 15 459 1.57E-140 T 12-10-2018 IPR005801 ADC synthase GO:0009058 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.4E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.4E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.4E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.4E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.4E-36 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 4.2E-117 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 Gene3D G3DSA:3.40.1690.10 218 358 4.8E-52 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 SUPERFAMILY SSF160544 245 352 5.23E-35 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal vfu_A01395 56faa208495055f2cb87d3b07a7edd4e 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 5.2E-119 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 vfu_B00909 03fe2e9fa66ac6244eae1b02b05a6ad6 378 Gene3D G3DSA:1.20.1250.20 1 363 8.7E-49 T 12-10-2018 vfu_B00909 03fe2e9fa66ac6244eae1b02b05a6ad6 378 SUPERFAMILY SSF103473 3 363 1.06E-58 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00909 03fe2e9fa66ac6244eae1b02b05a6ad6 378 Pfam PF07690 Major Facilitator Superfamily 2 303 2.5E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 PIRSF PIRSF038994 1 378 1.2E-119 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 Gene3D G3DSA:2.30.40.10 6 373 9.2E-144 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 Pfam PF01979 Amidohydrolase family 51 374 3.7E-37 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 5.2E-159 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 SUPERFAMILY SSF51338 1 53 4.08E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 Gene3D G3DSA:3.20.20.140 55 341 9.2E-144 T 12-10-2018 vfu_A02606 abbd603274734af2e475a2501e47eb11 378 SUPERFAMILY SSF51556 54 347 2.6E-101 T 12-10-2018 IPR032466 Metal-dependent hydrolase vfu_A00160 18729b9051fc2060f0c4f2de479babb0 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 309 1.2E-125 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 vfu_A00160 18729b9051fc2060f0c4f2de479babb0 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 9.1E-70 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 vfu_A00160 18729b9051fc2060f0c4f2de479babb0 316 PIRSF PIRSF026649 7 311 6.9E-77 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 vfu_A00160 18729b9051fc2060f0c4f2de479babb0 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 313 44.127 T 12-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 vfu_A00951 7af2e1171b0fcdc21891bc740d5d9a81 148 SUPERFAMILY SSF55718 14 112 2.83E-20 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily vfu_A00951 7af2e1171b0fcdc21891bc740d5d9a81 148 Pfam PF02036 SCP-2 sterol transfer family 18 107 1.5E-17 T 12-10-2018 IPR003033 SCP2 sterol-binding domain vfu_A00951 7af2e1171b0fcdc21891bc740d5d9a81 148 Gene3D G3DSA:3.30.1050.10 11 113 2.7E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily vfu_A00951 7af2e1171b0fcdc21891bc740d5d9a81 148 PIRSF PIRSF025550 1 147 1.1E-72 T 12-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT vfu_A02947 a11344f668056c5e656eb10fc8760687 211 SUPERFAMILY SSF52833 11 110 3.73E-22 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02947 a11344f668056c5e656eb10fc8760687 211 Gene3D G3DSA:1.20.1050.10 89 193 1.3E-77 T 12-10-2018 vfu_A02947 a11344f668056c5e656eb10fc8760687 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 3.9E-17 T 12-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 vfu_A02947 a11344f668056c5e656eb10fc8760687 211 Gene3D G3DSA:3.40.30.10 11 202 1.3E-77 T 12-10-2018 vfu_A02947 a11344f668056c5e656eb10fc8760687 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 110 194 4.3E-8 T 12-10-2018 IPR004046 Glutathione S-transferase, C-terminal vfu_A02947 a11344f668056c5e656eb10fc8760687 211 SUPERFAMILY SSF47616 82 208 1.71E-23 T 12-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily vfu_B01219 d5669375ccf51bcc710cbb09fd29dccf 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 417 8.1E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01219 d5669375ccf51bcc710cbb09fd29dccf 453 Pfam PF01554 MatE 13 174 2.3E-29 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01219 d5669375ccf51bcc710cbb09fd29dccf 453 Pfam PF01554 MatE 243 404 4.3E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01219 d5669375ccf51bcc710cbb09fd29dccf 453 PIRSF PIRSF006603 2 453 1.5E-75 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00716 759f10ee05451fe37c80146414a20fc6 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 3.2E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00716 759f10ee05451fe37c80146414a20fc6 238 Gene3D G3DSA:1.10.3720.10 12 234 1.4E-46 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00716 759f10ee05451fe37c80146414a20fc6 238 SUPERFAMILY SSF161098 16 216 3.66E-39 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00716 759f10ee05451fe37c80146414a20fc6 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 125 2.3E-16 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_A02081 40ab677b139ef825b2e157927a286629 289 Pfam PF03466 LysR substrate binding domain 88 287 3.2E-45 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_A02081 40ab677b139ef825b2e157927a286629 289 SUPERFAMILY SSF46785 1 110 1.4E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02081 40ab677b139ef825b2e157927a286629 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02081 40ab677b139ef825b2e157927a286629 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02081 40ab677b139ef825b2e157927a286629 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.0E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02081 40ab677b139ef825b2e157927a286629 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.9E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_A02081 40ab677b139ef825b2e157927a286629 289 Gene3D G3DSA:3.40.190.290 92 289 1.2E-49 T 12-10-2018 vfu_A02081 40ab677b139ef825b2e157927a286629 289 SUPERFAMILY SSF53850 89 288 1.63E-40 T 12-10-2018 vfu_A02081 40ab677b139ef825b2e157927a286629 289 Gene3D G3DSA:1.10.10.10 1 91 3.6E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00743 6f13e342f8373dd074448d36a480a760 219 Gene3D G3DSA:3.10.450.710 31 211 6.3E-38 T 12-10-2018 vfu_A00743 6f13e342f8373dd074448d36a480a760 219 Pfam PF05494 MlaC protein 40 205 3.7E-47 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC vfu_A00743 6f13e342f8373dd074448d36a480a760 219 PIRSF PIRSF004649 5 218 6.7E-57 T 12-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC vfu_B00820 c6257d1cf0ff0502931f0f2a91f8ff98 153 SUPERFAMILY SSF69118 5 147 2.76E-38 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B00820 c6257d1cf0ff0502931f0f2a91f8ff98 153 Gene3D G3DSA:1.20.1290.10 1 148 1.7E-38 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 vfu_B00820 c6257d1cf0ff0502931f0f2a91f8ff98 153 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 35 81 2.6E-17 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B00820 c6257d1cf0ff0502931f0f2a91f8ff98 153 Pfam PF02627 Carboxymuconolactone decarboxylase family 26 98 1.8E-16 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 vfu_B00547 7ffef42b4b1ebd4a53f048b5bf86241a 317 SUPERFAMILY SSF53850 29 311 1.72E-50 T 12-10-2018 vfu_B00547 7ffef42b4b1ebd4a53f048b5bf86241a 317 Gene3D G3DSA:3.40.190.10 28 303 1.7E-71 T 12-10-2018 vfu_B00547 7ffef42b4b1ebd4a53f048b5bf86241a 317 Gene3D G3DSA:3.40.190.10 109 209 1.7E-71 T 12-10-2018 vfu_B00547 7ffef42b4b1ebd4a53f048b5bf86241a 317 Pfam PF09084 NMT1/THI5 like 37 249 3.7E-70 T 12-10-2018 IPR015168 SsuA/THI5-like vfu_A00645 7a24ba5cdba314aa6b3aef80aa9bed4f 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 5.7E-131 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_A00645 7a24ba5cdba314aa6b3aef80aa9bed4f 339 Gene3D G3DSA:3.40.630.30 1 274 7.1E-113 T 12-10-2018 vfu_A00645 7a24ba5cdba314aa6b3aef80aa9bed4f 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 5.0E-139 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_A00645 7a24ba5cdba314aa6b3aef80aa9bed4f 339 SUPERFAMILY SSF55729 1 337 1.98E-130 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00645 7a24ba5cdba314aa6b3aef80aa9bed4f 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 4.9E-133 T 12-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_B00378 678466ceea1d7d599844bfbb5744c1a5 396 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 25 118 9.0E-34 T 12-10-2018 IPR009826 DNA circulation, N-terminal vfu_B00378 678466ceea1d7d599844bfbb5744c1a5 396 Pfam PF07157 DNA circularisation protein N-terminus 6 91 1.4E-22 T 12-10-2018 IPR009826 DNA circulation, N-terminal vfu_B01064 e28448349b3e4da5f9fd07d8015e61b1 266 Pfam PF13411 MerR HTH family regulatory protein 8 76 2.5E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_B01064 e28448349b3e4da5f9fd07d8015e61b1 266 Gene3D G3DSA:1.10.1660.10 2 75 1.5E-25 T 12-10-2018 vfu_B01064 e28448349b3e4da5f9fd07d8015e61b1 266 SUPERFAMILY SSF46955 8 91 3.53E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_B01064 e28448349b3e4da5f9fd07d8015e61b1 266 SMART SM00422 8 77 4.9E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A01867 127cf28a6315d4bb12092bf78fe20fad 89 Pfam PF11173 Protein of unknown function (DUF2960) 1 76 3.7E-36 T 12-10-2018 IPR021343 Protein of unknown function DUF2960 vfu_A02296 1af9845c44de7ef1676ebcc3cedeceac 423 Pfam PF06097 Bacterial protein of unknown function (DUF945) 7 410 3.6E-41 T 12-10-2018 IPR010352 Protein of unknown function DUF945 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 SUPERFAMILY SSF51735 8 167 5.91E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 165 1.9E-38 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 Gene3D G3DSA:1.10.1040.10 171 293 4.2E-39 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 SUPERFAMILY SSF48179 169 293 2.83E-36 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 Gene3D G3DSA:3.40.50.720 4 169 4.0E-40 T 12-10-2018 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 PIRSF PIRSF000103 1 295 3.8E-58 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 12-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 vfu_B00945 14d708dbeb248fc177385fe584a073ed 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 290 2.9E-32 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 vfu_B00337 7e60de20634f9b85c43a1c2830d99f9f 208 Pfam PF00857 Isochorismatase family 4 201 4.1E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 vfu_B00337 7e60de20634f9b85c43a1c2830d99f9f 208 SUPERFAMILY SSF52499 3 205 6.02E-52 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_B00337 7e60de20634f9b85c43a1c2830d99f9f 208 Gene3D G3DSA:3.40.50.850 2 206 3.5E-72 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 vfu_A00133 33f17349c2e75286ec09f8c77dbb385d 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 46.276 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 vfu_A00133 33f17349c2e75286ec09f8c77dbb385d 313 Gene3D G3DSA:3.40.50.720 3 307 2.4E-115 T 12-10-2018 vfu_A00133 33f17349c2e75286ec09f8c77dbb385d 313 SUPERFAMILY SSF51735 1 308 7.74E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00133 33f17349c2e75286ec09f8c77dbb385d 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 1.9E-46 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 vfu_A00133 33f17349c2e75286ec09f8c77dbb385d 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 311 2.7E-126 T 12-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 vfu_A00133 33f17349c2e75286ec09f8c77dbb385d 313 Gene3D G3DSA:3.90.25.10 173 295 2.4E-115 T 12-10-2018 vfu_A01933 7fbffe867eae2d7cb0f15bcd31367f54 200 SUPERFAMILY SSF63737 3 192 4.05E-46 T 12-10-2018 vfu_A01933 7fbffe867eae2d7cb0f15bcd31367f54 200 Gene3D G3DSA:2.60.40.1730 15 193 2.5E-72 T 12-10-2018 vfu_A02692 733ead5785ef8c8d852fbdcbc050abaf 320 Pfam PF00691 OmpA family 196 294 1.7E-17 T 12-10-2018 IPR006665 OmpA-like domain vfu_A02692 733ead5785ef8c8d852fbdcbc050abaf 320 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 56 6.0E-18 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain vfu_A02692 733ead5785ef8c8d852fbdcbc050abaf 320 Gene3D G3DSA:3.30.1330.60 154 302 1.6E-51 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02692 733ead5785ef8c8d852fbdcbc050abaf 320 SUPERFAMILY SSF103088 183 300 3.27E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02827 35b0c63ba20fe4513bdefc76ecdc62d2 272 Gene3D G3DSA:3.40.50.720 8 272 5.2E-109 T 12-10-2018 vfu_A02827 35b0c63ba20fe4513bdefc76ecdc62d2 272 SUPERFAMILY SSF69572 11 270 4.19E-64 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 vfu_A02827 35b0c63ba20fe4513bdefc76ecdc62d2 272 Pfam PF00899 ThiF family 26 211 2.6E-38 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 vfu_A03128 2f28c427f18ba5ebb60889ab121231c7 469 Pfam PF00999 Sodium/hydrogen exchanger family 41 438 1.0E-55 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 vfu_A01183 ac049411001c149290c4e07091d672ec 667 Pfam PF07196 Flagellin hook IN motif 125 177 9.2E-7 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 vfu_A01183 ac049411001c149290c4e07091d672ec 667 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 431 656 2.3E-53 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 vfu_A01183 ac049411001c149290c4e07091d672ec 667 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 9.2E-21 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 vfu_A00411 91778682f575ca5d223bc699cf437990 41 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 3 17 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 vfu_A00411 91778682f575ca5d223bc699cf437990 41 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 27 6.8E-7 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 vfu_A00411 91778682f575ca5d223bc699cf437990 41 Gene3D G3DSA:3.40.50.150 1 41 1.9E-5 T 12-10-2018 vfu_A00914 04f3cccd3e67d03b84c313504fc2c858 328 SUPERFAMILY SSF161098 93 324 2.88E-13 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00914 04f3cccd3e67d03b84c313504fc2c858 328 Gene3D G3DSA:1.10.3720.10 88 327 1.4E-18 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00914 04f3cccd3e67d03b84c313504fc2c858 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 1.4E-38 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00813 1a9f1445b2114894571486b1a2bcb39a 264 SUPERFAMILY SSF46785 2 52 1.29E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00813 1a9f1445b2114894571486b1a2bcb39a 264 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 27 3.5E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00813 1a9f1445b2114894571486b1a2bcb39a 264 Gene3D G3DSA:1.10.10.10 1 50 8.8E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00813 1a9f1445b2114894571486b1a2bcb39a 264 SUPERFAMILY SSF53850 53 257 2.44E-46 T 12-10-2018 vfu_B00813 1a9f1445b2114894571486b1a2bcb39a 264 Pfam PF03466 LysR substrate binding domain 53 256 7.6E-45 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00813 1a9f1445b2114894571486b1a2bcb39a 264 Gene3D G3DSA:3.40.190.290 55 257 4.6E-64 T 12-10-2018 vfu_B01004 929c166495df416f1349fde8c271fe85 288 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site vfu_B01004 929c166495df416f1349fde8c271fe85 288 Gene3D G3DSA:1.10.357.140 13 166 1.6E-16 T 12-10-2018 vfu_B01004 929c166495df416f1349fde8c271fe85 288 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 284 16.942 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 vfu_B01004 929c166495df416f1349fde8c271fe85 288 Pfam PF01040 UbiA prenyltransferase family 18 269 3.1E-53 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 vfu_B01004 929c166495df416f1349fde8c271fe85 288 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 277 1.8E-81 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 vfu_B00429 f2aa3286cc96302d1c35e4a4edea0d3a 215 Pfam PF02397 Bacterial sugar transferase 25 207 8.5E-65 T 12-10-2018 IPR003362 Bacterial sugar transferase vfu_B00429 f2aa3286cc96302d1c35e4a4edea0d3a 215 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2 215 5.4E-106 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 SUPERFAMILY SSF141729 17 130 6.8E-16 T 12-10-2018 IPR037224 PapC, N-terminal domain superfamily GO:0005515 vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Pfam PF13953 PapC C-terminal domain 746 800 2.5E-12 T 12-10-2018 IPR025949 PapC-like, C-terminal domain vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Pfam PF13954 PapC N-terminal domain 17 157 3.9E-28 T 12-10-2018 IPR025885 PapC, N-terminal domain GO:0005515 vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Gene3D G3DSA:2.60.40.3110 239 327 7.9E-21 T 12-10-2018 vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Gene3D G3DSA:2.60.40.2070 739 813 5.6E-13 T 12-10-2018 vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Pfam PF00577 Outer membrane usher protein 178 728 4.3E-117 T 12-10-2018 IPR000015 Outer membrane usher protein GO:0009297|GO:0015473|GO:0016020 vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Gene3D G3DSA:3.10.20.410 16 132 8.4E-16 T 12-10-2018 vfu_A02751 ed708cce08d7cf7790f150f34eb3b86d 813 Gene3D G3DSA:2.60.40.2610 645 735 1.2E-9 T 12-10-2018 vfu_B00949 67ef1eb9a8d436bc65453e58170b4c9e 323 Gene3D G3DSA:3.90.25.10 172 307 6.8E-110 T 12-10-2018 vfu_B00949 67ef1eb9a8d436bc65453e58170b4c9e 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 200 3.5E-26 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 vfu_B00949 67ef1eb9a8d436bc65453e58170b4c9e 323 SUPERFAMILY SSF51735 1 313 8.11E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00949 67ef1eb9a8d436bc65453e58170b4c9e 323 Gene3D G3DSA:3.40.50.720 8 299 6.8E-110 T 12-10-2018 vfu_A01149 5a2ba5a0e71141f6d8bdfa19258fb346 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 4.9E-58 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC vfu_A01149 5a2ba5a0e71141f6d8bdfa19258fb346 159 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 2.9E-25 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 vfu_A01149 5a2ba5a0e71141f6d8bdfa19258fb346 159 Gene3D G3DSA:3.90.960.10 1 158 6.2E-59 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A01149 5a2ba5a0e71141f6d8bdfa19258fb346 159 SUPERFAMILY SSF55826 2 156 2.62E-45 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 vfu_A01149 5a2ba5a0e71141f6d8bdfa19258fb346 159 PIRSF PIRSF006181 1 159 2.6E-53 T 12-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC vfu_A02359 4519654acc6faec6d088c2a5f95d33bf 207 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 21 202 3.3E-33 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 vfu_B01113 126152862931cdd068ace114b74aa99d 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 319 4.1E-34 T 12-10-2018 IPR000160 GGDEF domain vfu_B01113 126152862931cdd068ace114b74aa99d 324 Gene3D G3DSA:3.30.450.40 9 165 4.3E-18 T 12-10-2018 IPR029016 GAF-like domain superfamily vfu_B01113 126152862931cdd068ace114b74aa99d 324 SMART SM00065 26 168 9.2E-14 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_B01113 126152862931cdd068ace114b74aa99d 324 SUPERFAMILY SSF55781 27 158 3.27E-27 T 12-10-2018 vfu_B01113 126152862931cdd068ace114b74aa99d 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 164 319 6.3E-36 T 12-10-2018 IPR000160 GGDEF domain vfu_B01113 126152862931cdd068ace114b74aa99d 324 Pfam PF01590 GAF domain 28 154 1.9E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 vfu_B01113 126152862931cdd068ace114b74aa99d 324 SMART SM00267 151 321 4.7E-37 T 12-10-2018 IPR000160 GGDEF domain vfu_B01113 126152862931cdd068ace114b74aa99d 324 SUPERFAMILY SSF55073 169 317 1.65E-35 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B01113 126152862931cdd068ace114b74aa99d 324 Gene3D G3DSA:3.30.70.270 166 323 1.5E-40 T 12-10-2018 vfu_B01190 70535fc72689f2cf6cc6621109c08341 425 Pfam PF06812 ImpA, N-terminal, type VI secretion system 23 98 3.7E-8 T 12-10-2018 IPR010657 ImpA, N-terminal vfu_B00888 6a32762d5805945b5b56affed0149eaa 503 Pfam PF03806 AbgT putative transporter family 15 502 3.6E-155 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 vfu_B00583 ab140cf4b1377fbd5091bbf435759cc4 209 Pfam PF01323 DSBA-like thioredoxin domain 8 182 3.4E-6 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 vfu_B00583 ab140cf4b1377fbd5091bbf435759cc4 209 SUPERFAMILY SSF52833 3 189 1.37E-23 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00583 ab140cf4b1377fbd5091bbf435759cc4 209 Gene3D G3DSA:3.40.30.10 2 206 8.2E-42 T 12-10-2018 vfu_A00827 b9daddfbfa203bceb315fa438d6bef47 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 4.2E-25 T 12-10-2018 IPR005631 Flavinator of succinate dehydrogenase vfu_A00827 b9daddfbfa203bceb315fa438d6bef47 86 Gene3D G3DSA:1.10.150.250 1 86 2.5E-38 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily vfu_A00827 b9daddfbfa203bceb315fa438d6bef47 86 SUPERFAMILY SSF109910 3 79 1.57E-26 T 12-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily vfu_A02695 bcbd0718040f8d99ede6fa21d298a646 294 Pfam PF00348 Polyprenyl synthetase 31 261 5.7E-57 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 vfu_A02695 bcbd0718040f8d99ede6fa21d298a646 294 Gene3D G3DSA:1.10.600.10 1 294 1.1E-113 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily vfu_A02695 bcbd0718040f8d99ede6fa21d298a646 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site vfu_A02695 bcbd0718040f8d99ede6fa21d298a646 294 SUPERFAMILY SSF48576 4 289 3.04E-85 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily vfu_A02695 bcbd0718040f8d99ede6fa21d298a646 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site vfu_A00010 d0d89b3a5a04eec18c625da3576d09ae 75 Pfam PF04102 SlyX 11 75 1.0E-23 T 12-10-2018 IPR007236 SlyX vfu_A00010 d0d89b3a5a04eec18c625da3576d09ae 75 Gene3D G3DSA:1.20.5.300 3 52 7.7E-6 T 12-10-2018 vfu_A00010 d0d89b3a5a04eec18c625da3576d09ae 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 16.981 T 12-10-2018 IPR007236 SlyX vfu_B00266 3e473b1dffe4931be5b504935bcbe502 331 SUPERFAMILY SSF52540 5 169 2.63E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00266 3e473b1dffe4931be5b504935bcbe502 331 SMART SM00833 241 324 0.0021 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal vfu_B00266 3e473b1dffe4931be5b504935bcbe502 331 Gene3D G3DSA:3.40.50.300 2 198 9.5E-48 T 12-10-2018 vfu_B00266 3e473b1dffe4931be5b504935bcbe502 331 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 178 2.4E-44 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain vfu_A01814 ff8b3c517241ba25bfc3b424defe52a9 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 14 258 1.2E-45 T 12-10-2018 vfu_A01814 ff8b3c517241ba25bfc3b424defe52a9 298 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 vfu_A01814 ff8b3c517241ba25bfc3b424defe52a9 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.914 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 vfu_A01814 ff8b3c517241ba25bfc3b424defe52a9 298 SUPERFAMILY SSF51621 5 294 6.28E-97 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 vfu_A01814 ff8b3c517241ba25bfc3b424defe52a9 298 Gene3D G3DSA:3.20.20.60 2 298 2.3E-99 T 12-10-2018 vfu_A01814 ff8b3c517241ba25bfc3b424defe52a9 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 2.0E-126 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 vfu_B00658 1cf1a67da67127728a65250846672949 507 SUPERFAMILY SSF56801 2 478 1.06E-82 T 12-10-2018 vfu_B00658 1cf1a67da67127728a65250846672949 507 Gene3D G3DSA:3.40.50.12780 1 374 1.5E-65 T 12-10-2018 vfu_B00658 1cf1a67da67127728a65250846672949 507 Pfam PF00501 AMP-binding enzyme 9 381 2.9E-56 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_B00658 1cf1a67da67127728a65250846672949 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 12-10-2018 IPR020845 AMP-binding, conserved site vfu_A02254 99ce679f09666d4c6e5662c733ad63c4 296 SUPERFAMILY SSF64518 1 295 6.02E-39 T 12-10-2018 vfu_A02254 99ce679f09666d4c6e5662c733ad63c4 296 Pfam PF00669 Bacterial flagellin N-terminal helical region 9 138 6.7E-11 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01150 153ae454c817259b9058d96100a79230 416 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 vfu_A01150 153ae454c817259b9058d96100a79230 416 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 3.8E-111 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 vfu_A01150 153ae454c817259b9058d96100a79230 416 Pfam PF00860 Permease family 3 371 2.0E-91 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 vfu_A00672 da2b81ad9d1f16d7c336313723cae662 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.662 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00672 da2b81ad9d1f16d7c336313723cae662 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 2.6E-39 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 vfu_A00672 da2b81ad9d1f16d7c336313723cae662 110 SUPERFAMILY SSF54843 1 109 1.44E-44 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A00672 da2b81ad9d1f16d7c336313723cae662 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00672 da2b81ad9d1f16d7c336313723cae662 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.1E-50 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 vfu_A00672 da2b81ad9d1f16d7c336313723cae662 110 Gene3D G3DSA:3.90.470.10 1 110 3.4E-48 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 Pfam PF13377 Periplasmic binding protein-like domain 170 330 6.4E-44 T 12-10-2018 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 SUPERFAMILY SSF47413 1 59 1.02E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 SUPERFAMILY SSF53822 60 332 1.43E-94 T 12-10-2018 IPR028082 Periplasmic binding protein-like I vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 64.556 T 12-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 Gene3D G3DSA:3.40.50.2300 161 323 2.5E-92 T 12-10-2018 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 Gene3D G3DSA:1.10.260.40 3 59 7.4E-25 T 12-10-2018 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 SMART SM00354 1 71 4.0E-38 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 vfu_A01622 82ee1eb34941d2dbb6fd8895faf8956a 336 Gene3D G3DSA:3.40.50.2300 69 322 2.5E-92 T 12-10-2018 vfu_A01978 d7db8e511d7f5cf595d4dcc7810e3db3 158 Pfam PF13505 Outer membrane protein beta-barrel domain 6 157 1.8E-18 T 12-10-2018 IPR027385 Outer membrane protein beta-barrel vfu_A01978 d7db8e511d7f5cf595d4dcc7810e3db3 158 Gene3D G3DSA:2.40.160.20 19 158 5.8E-27 T 12-10-2018 vfu_A01978 d7db8e511d7f5cf595d4dcc7810e3db3 158 SUPERFAMILY SSF56925 18 157 5.49E-22 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A01495 6bc71d81dea2c2741a9a238f69c6bf64 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 309 1.4E-35 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01495 6bc71d81dea2c2741a9a238f69c6bf64 317 SUPERFAMILY SSF161098 98 294 6.93E-16 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01495 6bc71d81dea2c2741a9a238f69c6bf64 317 Gene3D G3DSA:1.10.3720.10 90 302 9.2E-19 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01299 edfac5858914e031045b0c9fbe238955 252 Pfam PF04338 Protein of unknown function, DUF481 42 252 1.5E-41 T 12-10-2018 IPR007433 Protein of unknown function DUF481 vfu_A01299 edfac5858914e031045b0c9fbe238955 252 SUPERFAMILY SSF56935 38 203 6.96E-5 T 12-10-2018 vfu_A00909 96a767a486d624ac82f844f51cecd37f 291 SUPERFAMILY SSF53067 3 112 4.29E-23 T 12-10-2018 vfu_A00909 96a767a486d624ac82f844f51cecd37f 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 283 4.2E-41 T 12-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 vfu_A00909 96a767a486d624ac82f844f51cecd37f 291 Gene3D G3DSA:3.30.420.40 4 114 5.0E-65 T 12-10-2018 vfu_A00909 96a767a486d624ac82f844f51cecd37f 291 Gene3D G3DSA:3.30.420.40 115 261 5.0E-65 T 12-10-2018 vfu_A00909 96a767a486d624ac82f844f51cecd37f 291 SUPERFAMILY SSF53067 114 283 2.76E-44 T 12-10-2018 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Gene3D G3DSA:1.20.1330.10 44 326 2.8E-79 T 12-10-2018 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 375 1.8E-25 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Pfam PF07196 Flagellin hook IN motif 193 247 8.2E-12 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PRINTS PR00207 Flagellin signature 37 54 1.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PRINTS PR00207 Flagellin signature 76 95 1.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 PRINTS PR00207 Flagellin signature 111 134 1.4E-27 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Gene3D G3DSA:1.10.8.410 327 375 2.1E-20 T 12-10-2018 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.2E-44 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 Gene3D G3DSA:3.30.70.2120 174 274 2.8E-79 T 12-10-2018 vfu_A01181 60b2f22c2e87dae7fdaf14d7a0eb2e47 376 SUPERFAMILY SSF64518 1 375 1.44E-96 T 12-10-2018 vfu_A02365 f48afe66c31d0215023b13311673e851 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 4.0E-87 T 12-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 vfu_A02365 f48afe66c31d0215023b13311673e851 269 Gene3D G3DSA:3.60.10.10 1 268 4.1E-77 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_A02365 f48afe66c31d0215023b13311673e851 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.8E-20 T 12-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase vfu_A02365 f48afe66c31d0215023b13311673e851 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 8.5E-100 T 12-10-2018 vfu_A02365 f48afe66c31d0215023b13311673e851 269 SUPERFAMILY SSF56219 1 267 6.41E-87 T 12-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily vfu_A02365 f48afe66c31d0215023b13311673e851 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 12-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 vfu_A02365 f48afe66c31d0215023b13311673e851 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 12-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 vfu_A01421 22cda3b512bcff561c9a589779183970 668 Gene3D G3DSA:1.10.287.950 337 668 2.3E-64 T 12-10-2018 vfu_A01421 22cda3b512bcff561c9a589779183970 668 SMART SM00283 409 667 3.6E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01421 22cda3b512bcff561c9a589779183970 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 633 1.1E-38 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01421 22cda3b512bcff561c9a589779183970 668 SUPERFAMILY SSF58104 359 668 4.45E-67 T 12-10-2018 vfu_A01421 22cda3b512bcff561c9a589779183970 668 SMART SM00304 337 391 1.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A02870 c525c7aaf5437cdbc95339d10bfc75d8 41 Pfam PF06568 Domain of unknown function (DUF1127) 2 31 1.1E-10 T 12-10-2018 IPR009506 Protein of unknown function DUF1127 vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 245 344 1.6E-25 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 Gene3D G3DSA:3.40.47.10 247 390 3.0E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 SMART SM00825 Beta-ketoacyl synthase 21 339 2.9E-9 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 61 238 8.4E-21 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 SUPERFAMILY SSF53901 9 238 9.69E-40 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 SUPERFAMILY SSF53901 212 392 6.81E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01515 bf0e3d38ceb0ba13dc347a8cf6560016 396 Gene3D G3DSA:3.40.47.10 16 243 4.1E-32 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01275 a8dd36d306222b0f0728797d781a54ae 111 Pfam PF00462 Glutaredoxin 16 80 4.4E-16 T 12-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 vfu_A01275 a8dd36d306222b0f0728797d781a54ae 111 Gene3D G3DSA:3.40.30.10 2 106 7.6E-30 T 12-10-2018 vfu_A01275 a8dd36d306222b0f0728797d781a54ae 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.2E-45 T 12-10-2018 IPR004480 Monothiol glutaredoxin-related vfu_A01275 a8dd36d306222b0f0728797d781a54ae 111 SUPERFAMILY SSF52833 1 104 2.39E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A01275 a8dd36d306222b0f0728797d781a54ae 111 PIRSF PIRSF005894 1 107 1.8E-51 T 12-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 vfu_A00989 0c86552096660e42f5ad20deb83f8bc3 370 Gene3D G3DSA:3.30.420.40 146 329 7.7E-132 T 12-10-2018 vfu_A00989 0c86552096660e42f5ad20deb83f8bc3 370 SUPERFAMILY SSF53067 6 343 5.44E-27 T 12-10-2018 vfu_A00989 0c86552096660e42f5ad20deb83f8bc3 370 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 6 369 5.6E-167 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 vfu_A00989 0c86552096660e42f5ad20deb83f8bc3 370 Gene3D G3DSA:3.30.420.40 12 364 7.7E-132 T 12-10-2018 vfu_A00989 0c86552096660e42f5ad20deb83f8bc3 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.757 T 12-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 vfu_A02274 07343309d600dbd738b3285824b26e90 349 Gene3D G3DSA:3.30.420.40 9 172 1.4E-93 T 12-10-2018 vfu_A02274 07343309d600dbd738b3285824b26e90 349 SUPERFAMILY SSF53067 6 163 4.34E-48 T 12-10-2018 vfu_A02274 07343309d600dbd738b3285824b26e90 349 Gene3D G3DSA:3.30.420.40 173 299 1.4E-93 T 12-10-2018 vfu_A02274 07343309d600dbd738b3285824b26e90 349 SUPERFAMILY SSF53067 170 329 7.13E-20 T 12-10-2018 vfu_A02274 07343309d600dbd738b3285824b26e90 349 Pfam PF06406 StbA protein 6 325 9.5E-108 T 12-10-2018 IPR009440 Plasmid segregation protein ParM/StbA vfu_A01859 99a86967edca2f204cfc2ab8f8480104 67 PIRSF PIRSF037225 1 65 7.0E-26 T 12-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 vfu_A01859 99a86967edca2f204cfc2ab8f8480104 67 Pfam PF14255 Cysteine-rich CPXCG 9 59 1.2E-20 T 12-10-2018 IPR025990 Cysteine-rich CPXCG protein vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 Gene3D G3DSA:3.40.190.290 94 297 1.7E-63 T 12-10-2018 vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 Pfam PF03466 LysR substrate binding domain 92 295 7.7E-46 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 SUPERFAMILY SSF53850 92 300 2.17E-45 T 12-10-2018 vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 1.4E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.8E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 Gene3D G3DSA:1.10.10.10 6 92 9.4E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00480 c0f482a05cd5ffcc481fbc884b990a9f 303 SUPERFAMILY SSF46785 9 87 9.98E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 Pfam PF00106 short chain dehydrogenase 13 209 2.8E-51 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.9E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 SUPERFAMILY SSF51735 9 242 7.39E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A01330 84c8b4a5318cdfa230c002d1a1126052 247 Gene3D G3DSA:3.40.50.720 1 246 1.2E-71 T 12-10-2018 vfu_B00690 34f71af240bfe46cc447eb0fe08350c2 217 Pfam PF01323 DSBA-like thioredoxin domain 5 207 1.7E-34 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 vfu_B00690 34f71af240bfe46cc447eb0fe08350c2 217 SUPERFAMILY SSF52833 4 213 4.29E-44 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00690 34f71af240bfe46cc447eb0fe08350c2 217 Gene3D G3DSA:3.40.30.10 1 211 7.7E-65 T 12-10-2018 vfu_A01651 b0228df2710c8e5ca980be3979fd3b7c 410 Pfam PF11449 Putative, 10TM heavy-metal exporter 51 408 2.7E-156 T 12-10-2018 IPR021552 Putative, 10TM heavy-metal exporter vfu_B01077 149095ca098701f020568a577fdee7a5 558 SUPERFAMILY SSF52091 440 541 8.24E-20 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B01077 149095ca098701f020568a577fdee7a5 558 Pfam PF01740 STAS domain 440 539 7.1E-20 T 12-10-2018 IPR002645 STAS domain vfu_B01077 149095ca098701f020568a577fdee7a5 558 Pfam PF00916 Sulfate permease family 21 384 3.1E-84 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 vfu_B01077 149095ca098701f020568a577fdee7a5 558 Gene3D G3DSA:3.30.750.24 423 550 6.4E-33 T 12-10-2018 IPR036513 STAS domain superfamily vfu_A02056 9d6edc29781b952d2fc8c48a4d7eb6b4 144 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 12 141 6.0E-30 T 12-10-2018 IPR010005 Formate hydrogenlyase maturation HycH vfu_A02056 9d6edc29781b952d2fc8c48a4d7eb6b4 144 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 12 141 8.3E-51 T 12-10-2018 IPR010005 Formate hydrogenlyase maturation HycH vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 Gene3D G3DSA:3.30.70.920 64 159 3.2E-24 T 12-10-2018 vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 12-10-2018 vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 2.7E-23 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 SUPERFAMILY SSF54909 74 158 1.34E-21 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 Gene3D G3DSA:1.10.10.10 1 63 4.0E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 SMART SM00344 12 121 7.3E-55 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 vfu_A02412 cbd66f177c2cae7bbe441ee54d0d9862 164 SUPERFAMILY SSF46785 12 70 2.17E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00347 8e99a027faf997d360c0336728adaf97 717 Pfam PF12805 FUSC-like inner membrane protein yccS 68 348 4.3E-110 T 12-10-2018 IPR032692 Integral membrane protein YccS, N-terminal vfu_B00347 8e99a027faf997d360c0336728adaf97 717 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 711 7.7E-244 T 12-10-2018 IPR010020 Integral membrane protein, YccS/YhfK vfu_B00347 8e99a027faf997d360c0336728adaf97 717 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 712 0.0 T 12-10-2018 IPR010019 Integral membrane protein, YccS vfu_B00347 8e99a027faf997d360c0336728adaf97 717 Pfam PF13515 Fusaric acid resistance protein-like 406 523 2.0E-21 T 12-10-2018 vfu_A02709 109ab248196a84c32f2c51fa8e596727 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 27.336 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 vfu_A02709 109ab248196a84c32f2c51fa8e596727 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 2.0E-18 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 vfu_A02709 109ab248196a84c32f2c51fa8e596727 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 1.6E-34 T 12-10-2018 IPR009624 Uncharacterised protein family UPF0253 vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 Gene3D G3DSA:3.20.70.20 42 125 2.6E-25 T 12-10-2018 vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 1.7E-68 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 PIRSF PIRSF000378 2 125 7.8E-53 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 SUPERFAMILY SSF51998 63 124 1.65E-23 T 12-10-2018 vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 Pfam PF01228 Glycine radical 16 106 4.9E-22 T 12-10-2018 IPR001150 Glycine radical domain GO:0003824 vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 12-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site vfu_A02894 f0b94a42544453efbe756ae9058a887f 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.044 T 12-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA vfu_A01865 2501ea66c2d267e97ad4d27eb279c8e9 245 SMART SM01144 27 221 7.3E-62 T 12-10-2018 IPR005636 DTW vfu_A01865 2501ea66c2d267e97ad4d27eb279c8e9 245 Pfam PF03942 DTW domain 29 215 1.3E-39 T 12-10-2018 IPR005636 DTW vfu_A00652 d0f72f7ff6553b0d045c227c38df376e 157 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.0E-27 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 vfu_A00652 d0f72f7ff6553b0d045c227c38df376e 157 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 1.4E-35 T 12-10-2018 IPR012659 Conserved hypothetical protein CHP02444 vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 8.1E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 8.1E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 8.1E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 8.1E-28 T 12-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 Gene3D G3DSA:3.40.50.300 1 289 3.7E-111 T 12-10-2018 vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 SUPERFAMILY SSF52540 4 286 4.99E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00649 12d4a18fe8149a9f20436685c65ddcec 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.9E-70 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 vfu_B00170 fa63f20d64cf0a3f114f0af62471987f 56 Gene3D G3DSA:1.10.4160.10 3 54 6.7E-9 T 12-10-2018 IPR038271 Purine-cytosine permease superfamily vfu_A03098 ad8cefd83479d8910ead74f249709e6d 188 Gene3D G3DSA:3.90.950.10 4 188 9.0E-72 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A03098 ad8cefd83479d8910ead74f249709e6d 188 Hamap MF_00528 Septum formation protein Maf [maf]. 5 188 30.058 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A03098 ad8cefd83479d8910ead74f249709e6d 188 SUPERFAMILY SSF52972 2 186 2.88E-63 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A03098 ad8cefd83479d8910ead74f249709e6d 188 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 184 2.7E-59 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A03098 ad8cefd83479d8910ead74f249709e6d 188 Pfam PF02545 Maf-like protein 5 186 1.9E-61 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A03098 ad8cefd83479d8910ead74f249709e6d 188 PIRSF PIRSF006305 1 188 2.3E-57 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 Gene3D G3DSA:3.90.1150.10 10 394 1.2E-187 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 5.7E-184 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.434 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 PIRSF PIRSF000412 1 415 2.9E-169 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 Gene3D G3DSA:3.40.640.10 37 288 1.2E-187 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 vfu_A02660 2c64734fd803af884bdbcb01dc855348 416 SUPERFAMILY SSF53383 6 415 2.86E-184 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase vfu_A01763 8d52f4ec37ce10f450337b160d33e249 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 43 228 1.7E-25 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 vfu_A01763 8d52f4ec37ce10f450337b160d33e249 238 SMART SM00479 47 228 1.8E-21 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01763 8d52f4ec37ce10f450337b160d33e249 238 Gene3D G3DSA:3.30.420.10 43 228 6.4E-37 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A01763 8d52f4ec37ce10f450337b160d33e249 238 Pfam PF00929 Exonuclease 49 219 1.8E-15 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01763 8d52f4ec37ce10f450337b160d33e249 238 SUPERFAMILY SSF53098 40 226 8.6E-40 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_B00198 f3213230f33045443e9541c2eaee65f7 385 SUPERFAMILY SSF55073 217 381 6.83E-34 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00198 f3213230f33045443e9541c2eaee65f7 385 Gene3D G3DSA:3.30.70.270 206 383 2.2E-44 T 12-10-2018 vfu_B00198 f3213230f33045443e9541c2eaee65f7 385 SMART SM00267 202 384 5.9E-31 T 12-10-2018 IPR000160 GGDEF domain vfu_B00198 f3213230f33045443e9541c2eaee65f7 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 211 317 1.5E-23 T 12-10-2018 IPR000160 GGDEF domain vfu_B00198 f3213230f33045443e9541c2eaee65f7 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 213 379 2.0E-28 T 12-10-2018 IPR000160 GGDEF domain vfu_A02905 41f5d6ba8e32ac4c82ae8e3c3f0bc1c1 286 Gene3D G3DSA:3.80.30.20 18 246 4.0E-18 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_A02905 41f5d6ba8e32ac4c82ae8e3c3f0bc1c1 286 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 1 276 7.0E-128 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 vfu_A02905 41f5d6ba8e32ac4c82ae8e3c3f0bc1c1 286 Pfam PF04055 Radical SAM superfamily 19 177 3.0E-16 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A02905 41f5d6ba8e32ac4c82ae8e3c3f0bc1c1 286 Pfam PF16199 Radical_SAM C-terminal domain 185 256 3.4E-19 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 vfu_A02905 41f5d6ba8e32ac4c82ae8e3c3f0bc1c1 286 SUPERFAMILY SSF102114 7 244 9.55E-48 T 12-10-2018 vfu_A02905 41f5d6ba8e32ac4c82ae8e3c3f0bc1c1 286 SMART SM00729 1 223 2.2E-41 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_B01387 76a836264ac86a680bb20e6284b1b316 309 SUPERFAMILY SSF50891 182 293 6.45E-12 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_B01387 76a836264ac86a680bb20e6284b1b316 309 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 27 289 3.7E-88 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B vfu_B01387 76a836264ac86a680bb20e6284b1b316 309 Gene3D G3DSA:2.40.100.10 180 308 4.7E-45 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily vfu_B01387 76a836264ac86a680bb20e6284b1b316 309 SMART SM00797 26 306 1.4E-137 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B vfu_B01387 76a836264ac86a680bb20e6284b1b316 309 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 293 5.8E-84 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B vfu_A02246 449cea5736a5323954298276493e7c6c 233 Gene3D G3DSA:2.30.30.760 173 233 4.1E-8 T 12-10-2018 vfu_A02246 449cea5736a5323954298276493e7c6c 233 Pfam PF13144 Chaperone for flagella basal body P-ring formation 53 231 4.3E-32 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal vfu_A02246 449cea5736a5323954298276493e7c6c 233 SMART SM00858 110 171 2.6E-8 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_A02246 449cea5736a5323954298276493e7c6c 233 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 98 231 3.7E-28 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal vfu_B00438 784aa1176528e7fab28411bef761a169 157 Gene3D G3DSA:3.40.50.1010 1 157 5.1E-56 T 12-10-2018 vfu_B00438 784aa1176528e7fab28411bef761a169 157 Pfam PF01936 NYN domain 4 151 5.6E-40 T 12-10-2018 IPR021139 NYN domain, limkain-b1-type vfu_A01387 192f0fe8b26180bb25d57b8538f42977 167 Pfam PF03748 Flagellar basal body-associated protein FliL 68 167 4.4E-16 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 vfu_A01172 9ac4da2327cfd22a074041160ddb2719 224 Pfam PF00929 Exonuclease 37 201 2.8E-9 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01172 9ac4da2327cfd22a074041160ddb2719 224 Gene3D G3DSA:3.30.420.10 25 211 5.5E-31 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A01172 9ac4da2327cfd22a074041160ddb2719 224 SMART SM00479 33 210 4.1E-17 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III vfu_A01172 9ac4da2327cfd22a074041160ddb2719 224 SUPERFAMILY SSF53098 25 210 1.35E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A01341 16a0f09eced7f70ff4cb54dae19a75cf 209 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 187 6.5E-50 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 vfu_A01341 16a0f09eced7f70ff4cb54dae19a75cf 209 Gene3D G3DSA:3.90.226.10 5 189 3.5E-67 T 12-10-2018 vfu_A01341 16a0f09eced7f70ff4cb54dae19a75cf 209 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 vfu_A01341 16a0f09eced7f70ff4cb54dae19a75cf 209 SUPERFAMILY SSF52096 17 186 3.37E-50 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily vfu_B01054 fd6db67b4dededc1f67daa11d0ac3ce9 163 SUPERFAMILY SSF55729 3 161 9.62E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B01054 fd6db67b4dededc1f67daa11d0ac3ce9 163 Gene3D G3DSA:3.40.630.30 1 162 4.6E-43 T 12-10-2018 vfu_B01054 fd6db67b4dededc1f67daa11d0ac3ce9 163 Pfam PF00583 Acetyltransferase (GNAT) family 35 136 4.6E-17 T 12-10-2018 IPR000182 GNAT domain vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 Gene3D G3DSA:3.30.860.10 1 49 8.0E-23 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 Pfam PF00203 Ribosomal protein S19 1 40 3.8E-19 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 PIRSF PIRSF002144 1 49 4.3E-18 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 SUPERFAMILY SSF54570 1 41 4.71E-19 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 PRINTS PR00975 Ribosomal protein S19 family signature 22 37 4.7E-13 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 PRINTS PR00975 Ribosomal protein S19 family signature 10 22 4.7E-13 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00671 d7ad2e21f21dea454ad2a24c5eb9ad3c 49 ProSitePatterns PS00323 Ribosomal protein S19 signature. 10 34 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_B00458 f808b6b1e324a3fe8e2f0072a987657d 255 Pfam PF00005 ABC transporter 19 166 1.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00458 f808b6b1e324a3fe8e2f0072a987657d 255 SMART SM00382 26 214 2.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00458 f808b6b1e324a3fe8e2f0072a987657d 255 SUPERFAMILY SSF52540 6 229 9.71E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00458 f808b6b1e324a3fe8e2f0072a987657d 255 Gene3D G3DSA:3.40.50.300 1 254 7.9E-66 T 12-10-2018 vfu_B00458 f808b6b1e324a3fe8e2f0072a987657d 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 Gene3D G3DSA:3.40.50.300 6 213 1.1E-60 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 1.3E-42 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 4.4E-91 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 SUPERFAMILY SSF52540 6 204 2.21E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02565 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 178 191 4.1E-37 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 156 167 4.1E-37 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 41 52 4.1E-37 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 142 152 4.1E-37 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 86 101 4.1E-37 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 PRINTS PR00988 Uridine kinase signature 7 24 4.1E-37 T 12-10-2018 vfu_A02565 4840d6fe11531692c2375f736c413c72 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 39.787 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 vfu_B00698 eba61fc50dc76745d708a57567e24b89 555 Pfam PF13584 Oxygen tolerance 28 479 1.9E-93 T 12-10-2018 IPR025738 Aerotolerance-related protein BatD vfu_B00636 2dc4739a07b8c865eac630c98cab08dc 239 Pfam PF00800 Prephenate dehydratase 31 214 2.1E-17 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 vfu_B00636 2dc4739a07b8c865eac630c98cab08dc 239 Gene3D G3DSA:3.40.190.10 113 203 1.4E-18 T 12-10-2018 vfu_B00636 2dc4739a07b8c865eac630c98cab08dc 239 Gene3D G3DSA:3.40.190.10 33 211 1.4E-18 T 12-10-2018 vfu_B00636 2dc4739a07b8c865eac630c98cab08dc 239 SUPERFAMILY SSF53850 27 214 1.19E-13 T 12-10-2018 vfu_A00070 5cfd90835a88a371251198699c56ddd0 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 7.1E-110 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 vfu_A00070 5cfd90835a88a371251198699c56ddd0 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.69 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 vfu_A00070 5cfd90835a88a371251198699c56ddd0 295 PIRSF PIRSF000401 1 295 1.6E-99 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 vfu_A00070 5cfd90835a88a371251198699c56ddd0 295 Gene3D G3DSA:3.40.50.150 102 294 5.0E-58 T 12-10-2018 vfu_A00070 5cfd90835a88a371251198699c56ddd0 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 7.0E-104 T 12-10-2018 vfu_A00070 5cfd90835a88a371251198699c56ddd0 295 SUPERFAMILY SSF53335 44 292 4.37E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B01376 8a8984a5c5184d6c0c64eea57782ee90 202 Pfam PF09997 Predicted membrane protein (DUF2238) 40 176 8.3E-51 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 vfu_B01376 8a8984a5c5184d6c0c64eea57782ee90 202 PIRSF PIRSF020606 1 199 6.2E-79 T 12-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 vfu_A02228 7b88b5d0efe1b43be2d29637a397b61b 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 130 4.0E-50 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein vfu_A02228 7b88b5d0efe1b43be2d29637a397b61b 130 Gene3D G3DSA:3.30.300.250 20 130 2.0E-43 T 12-10-2018 vfu_A02228 7b88b5d0efe1b43be2d29637a397b61b 130 PIRSF PIRSF007010 1 130 9.4E-52 T 12-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 5.0E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 5.0E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 5.0E-22 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 SUPERFAMILY SSF58104 109 418 3.92E-75 T 12-10-2018 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 Gene3D G3DSA:1.10.287.950 90 418 1.5E-69 T 12-10-2018 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 SMART SM00304 89 141 0.0037 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 SMART SM00283 156 417 2.4E-74 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00855 1b62d3f34442d32dea374dea88c7b86a 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 8.8E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00611 aba3c1f08e9608a9adeb3218ccb8318d 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 1.1E-17 T 12-10-2018 IPR012451 Protein of unknown function DUF1656 vfu_B01110 e1f0205f86755509a97e2bc302241675 202 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 145 198 3.4E-13 T 12-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type vfu_B01110 e1f0205f86755509a97e2bc302241675 202 Gene3D G3DSA:1.10.357.10 60 200 1.6E-27 T 12-10-2018 vfu_B01110 e1f0205f86755509a97e2bc302241675 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 1.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01110 e1f0205f86755509a97e2bc302241675 202 SUPERFAMILY SSF46689 3 74 5.49E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B01110 e1f0205f86755509a97e2bc302241675 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 5.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01110 e1f0205f86755509a97e2bc302241675 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 5.8E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B01110 e1f0205f86755509a97e2bc302241675 202 Gene3D G3DSA:1.10.10.60 2 57 2.2E-20 T 12-10-2018 vfu_A01714 2f302e6ba25bf12bcfd3cc1ac8b39d15 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 2.7E-85 T 12-10-2018 IPR021316 Protein of unknown function DUF2913 vfu_A03090 6b4d8e88a3e203eacb193cf8c57474fe 168 Pfam PF09834 Predicted membrane protein (DUF2061) 105 155 8.1E-22 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane vfu_A03090 6b4d8e88a3e203eacb193cf8c57474fe 168 Pfam PF09834 Predicted membrane protein (DUF2061) 40 91 3.2E-22 T 12-10-2018 IPR018638 Domain of unknown function DUF2061, membrane vfu_A01620 a803be35c5df16455a93288f4c94e26e 228 Pfam PF09335 SNARE associated Golgi protein 65 182 2.7E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein vfu_B00696 478e7699ed75171a414c0da89fb451b3 322 Pfam PF00092 von Willebrand factor type A domain 86 278 2.8E-33 T 12-10-2018 IPR002035 von Willebrand factor, type A vfu_B00696 478e7699ed75171a414c0da89fb451b3 322 SMART SM00327 84 284 9.1E-18 T 12-10-2018 IPR002035 von Willebrand factor, type A vfu_B00696 478e7699ed75171a414c0da89fb451b3 322 Gene3D G3DSA:3.40.50.410 83 285 1.4E-58 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00696 478e7699ed75171a414c0da89fb451b3 322 SUPERFAMILY SSF53300 83 281 6.82E-37 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_A01352 09fe8a29c61163e1bef504af1acc7493 147 SUPERFAMILY SSF140566 8 134 1.14E-21 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 vfu_A01352 09fe8a29c61163e1bef504af1acc7493 147 Gene3D G3DSA:1.20.58.300 7 133 1.7E-18 T 12-10-2018 vfu_A01352 09fe8a29c61163e1bef504af1acc7493 147 Pfam PF05130 FlgN protein 10 124 1.2E-12 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 vfu_B00315 35397c61fa4713435637fa73c6f8c586 44 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 4.8E-29 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 vfu_B00315 35397c61fa4713435637fa73c6f8c586 44 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 4.0E-28 T 12-10-2018 IPR014175 Conserved hypothetical protein CHP02808 vfu_B00772 163b735f33f4bc7ad52bb16add09fbe1 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 361 2.3E-43 T 12-10-2018 IPR000160 GGDEF domain vfu_B00772 163b735f33f4bc7ad52bb16add09fbe1 407 SMART SM00267 180 362 8.7E-51 T 12-10-2018 IPR000160 GGDEF domain vfu_B00772 163b735f33f4bc7ad52bb16add09fbe1 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 358 3.5E-40 T 12-10-2018 IPR000160 GGDEF domain vfu_B00772 163b735f33f4bc7ad52bb16add09fbe1 407 SUPERFAMILY SSF55073 196 363 4.71E-43 T 12-10-2018 IPR029787 Nucleotide cyclase vfu_B00772 163b735f33f4bc7ad52bb16add09fbe1 407 Gene3D G3DSA:3.30.70.270 185 368 1.5E-50 T 12-10-2018 vfu_A02617 faa045304cc13332d95bcda1dd6afbe5 173 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 170 1.6E-71 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 vfu_A02617 faa045304cc13332d95bcda1dd6afbe5 173 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 172 3.0E-65 T 12-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.7E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.7E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.7E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.7E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.7E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.7E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82866 290 491 6.02E-40 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82714 184 263 6.54E-11 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:1.20.1640.10 510 1018 6.1E-256 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82866 788 1023 1.24E-48 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.70.1440 652 849 6.1E-256 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82693 41 133 2.3E-22 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82693 143 325 2.04E-11 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.70.1430 565 651 6.1E-256 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.2090.10 178 268 6.1E-256 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.70.1320 135 327 6.1E-256 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 2.8E-169 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 SUPERFAMILY SSF82714 706 787 5.89E-6 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:1.20.1640.10 13 509 6.1E-256 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.70.1430 41 799 6.1E-256 T 12-10-2018 vfu_A00923 808f5385c493b3a72e829ca477622cce 1026 Gene3D G3DSA:3.30.2090.10 703 791 6.1E-256 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains vfu_A02400 9dbf7ef0131e0a5d30ce096e5d86838b 284 SUPERFAMILY SSF56112 30 269 6.41E-32 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily vfu_A02400 9dbf7ef0131e0a5d30ce096e5d86838b 284 Gene3D G3DSA:3.90.1200.10 113 278 1.4E-12 T 12-10-2018 vfu_A02400 9dbf7ef0131e0a5d30ce096e5d86838b 284 Pfam PF01636 Phosphotransferase enzyme family 33 219 5.3E-11 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase vfu_A00204 ce27acc1187064e8f8fa4dace46f2efd 351 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 330 351 6.0E-4 T 12-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 vfu_A00204 ce27acc1187064e8f8fa4dace46f2efd 351 Pfam PF06958 S-type Pyocin 255 324 4.2E-11 T 12-10-2018 IPR016128 Pyosin/cloacin translocation domain GO:0009405 vfu_A03077 87520409f996341025ae7a39c324a172 236 Pfam PF06738 Putative threonine/serine exporter 1 230 5.9E-68 T 12-10-2018 IPR010619 Putative threonine/serine exporter vfu_A00632 330bf1e0ea4e50aa1b6f6670d1fbdc29 162 Gene3D G3DSA:2.30.30.830 82 162 4.9E-24 T 12-10-2018 vfu_A00632 330bf1e0ea4e50aa1b6f6670d1fbdc29 162 Pfam PF04351 Pilus assembly protein, PilP 16 161 2.0E-42 T 12-10-2018 IPR007446 Pilus assembly protein PilP vfu_A00632 330bf1e0ea4e50aa1b6f6670d1fbdc29 162 PIRSF PIRSF016481 1 162 8.8E-55 T 12-10-2018 IPR007446 Pilus assembly protein PilP vfu_B00013 750d1fb774b18393707b9ff22983d548 172 SUPERFAMILY SSF46785 5 142 2.58E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00013 750d1fb774b18393707b9ff22983d548 172 Gene3D G3DSA:1.10.10.10 4 156 1.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00013 750d1fb774b18393707b9ff22983d548 172 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 139 6.3E-26 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type vfu_B00013 750d1fb774b18393707b9ff22983d548 172 Pfam PF02082 Transcriptional regulator 4 84 9.0E-21 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type vfu_B00025 fa3447e13f1bb1c153fe09f3a38c3226 519 Pfam PF02470 MlaD protein 14 105 4.3E-10 T 12-10-2018 IPR003399 Mce/MlaD vfu_B00025 fa3447e13f1bb1c153fe09f3a38c3226 519 Pfam PF02470 MlaD protein 129 194 4.5E-8 T 12-10-2018 IPR003399 Mce/MlaD vfu_B00025 fa3447e13f1bb1c153fe09f3a38c3226 519 Pfam PF02470 MlaD protein 259 362 4.0E-12 T 12-10-2018 IPR003399 Mce/MlaD vfu_A00755 97cf772fed6eccadc614330dfe4dd700 259 SUPERFAMILY SSF55120 28 235 4.64E-65 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A00755 97cf772fed6eccadc614330dfe4dd700 259 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 220 6.2E-58 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A00755 97cf772fed6eccadc614330dfe4dd700 259 Pfam PF00849 RNA pseudouridylate synthase 37 183 6.6E-30 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A00755 97cf772fed6eccadc614330dfe4dd700 259 Gene3D G3DSA:3.30.2350.10 18 230 5.9E-70 T 12-10-2018 vfu_A00755 97cf772fed6eccadc614330dfe4dd700 259 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 74 88 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A01053 e7dcb0b7917a19d8fe14e9f482821caf 143 SUPERFAMILY SSF53271 2 130 1.16E-28 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A01053 e7dcb0b7917a19d8fe14e9f482821caf 143 Gene3D G3DSA:3.40.50.2020 1 141 3.3E-40 T 12-10-2018 vfu_A01053 e7dcb0b7917a19d8fe14e9f482821caf 143 Pfam PF00156 Phosphoribosyl transferase domain 19 132 4.0E-17 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_A01192 abff3d2ccd54d3c97129636878dd7164 267 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 1.0E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 vfu_A01192 abff3d2ccd54d3c97129636878dd7164 267 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 1.0E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 vfu_A01192 abff3d2ccd54d3c97129636878dd7164 267 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 1.0E-5 T 12-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 vfu_A01192 abff3d2ccd54d3c97129636878dd7164 267 Pfam PF02108 Flagellar assembly protein FliH 127 251 1.0E-33 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE vfu_B01285 486a43335c6efab0c5f0ddce1fc0dcef 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 15 135 1.9E-22 T 12-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 vfu_A02031 f04900e9b9e5d7786225181bafcb1637 323 Pfam PF01699 Sodium/calcium exchanger protein 4 140 1.8E-22 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 vfu_A02031 f04900e9b9e5d7786225181bafcb1637 323 Pfam PF01699 Sodium/calcium exchanger protein 174 318 2.7E-32 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 vfu_A02031 f04900e9b9e5d7786225181bafcb1637 323 Gene3D G3DSA:1.20.1420.30 35 311 3.2E-88 T 12-10-2018 vfu_A02031 f04900e9b9e5d7786225181bafcb1637 323 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 313 5.4E-67 T 12-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 vfu_A02031 f04900e9b9e5d7786225181bafcb1637 323 Gene3D G3DSA:1.20.58.1130 9 205 3.2E-88 T 12-10-2018 vfu_A02319 2a2e9fb5da3678b79b848442f08aef1f 155 Pfam PF07670 Nucleoside recognition 31 124 2.3E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_B00612 16bd073df73e37d87f3080bc5114789b 92 Gene3D G3DSA:1.10.260.40 1 65 4.5E-7 T 12-10-2018 vfu_B00612 16bd073df73e37d87f3080bc5114789b 92 SUPERFAMILY SSF47413 1 57 1.58E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00395 7378526cf6d6958fb7c20f5ad8bb28af 275 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 7 261 7.5E-37 T 12-10-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 Gene3D G3DSA:3.90.76.10 72 195 5.3E-195 T 12-10-2018 vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 PIRSF PIRSF002741 1 543 2.8E-120 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 Gene3D G3DSA:3.10.105.10 297 512 5.3E-195 T 12-10-2018 vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 463 8.0E-97 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 Gene3D G3DSA:3.40.190.10 43 524 5.3E-195 T 12-10-2018 vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 SUPERFAMILY SSF53850 40 535 1.03E-149 T 12-10-2018 vfu_A01533 f59f168ccde0c9f78a720d75940c4ff1 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site vfu_A01522 733b63880d99c15731812ba5d6c2b1af 123 Gene3D G3DSA:3.10.129.10 4 123 2.3E-34 T 12-10-2018 vfu_A01522 733b63880d99c15731812ba5d6c2b1af 123 PIRSF PIRSF030962 1 123 2.4E-50 T 12-10-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01522 733b63880d99c15731812ba5d6c2b1af 123 SUPERFAMILY SSF54637 13 112 2.05E-13 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 Gene3D G3DSA:1.10.10.10 3 91 5.4E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 Gene3D G3DSA:3.40.190.10 177 275 1.6E-43 T 12-10-2018 vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 Gene3D G3DSA:3.40.190.10 92 298 1.6E-43 T 12-10-2018 vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 8.6E-12 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 Pfam PF03466 LysR substrate binding domain 97 301 2.3E-18 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 SUPERFAMILY SSF46785 6 89 1.56E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00652 cc905d98aecbbd49c244bc21743fb88c 307 SUPERFAMILY SSF53850 92 301 6.15E-36 T 12-10-2018 vfu_A01302 975f10aa97b2177cfd2e8d7885fe9657 193 PIRSF PIRSF006305 1 193 1.1E-46 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A01302 975f10aa97b2177cfd2e8d7885fe9657 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 8.1E-53 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A01302 975f10aa97b2177cfd2e8d7885fe9657 193 Pfam PF02545 Maf-like protein 5 187 7.0E-46 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A01302 975f10aa97b2177cfd2e8d7885fe9657 193 SUPERFAMILY SSF52972 1 186 9.81E-58 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A01302 975f10aa97b2177cfd2e8d7885fe9657 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 29.492 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 vfu_A01302 975f10aa97b2177cfd2e8d7885fe9657 193 Gene3D G3DSA:3.90.950.10 5 192 8.7E-59 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like vfu_A00966 3cbcdd23bd530147afb5a08f81f59718 344 Pfam PF00248 Aldo/keto reductase family 15 335 3.6E-72 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain vfu_A00966 3cbcdd23bd530147afb5a08f81f59718 344 SUPERFAMILY SSF51430 1 344 1.57E-107 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily vfu_A00966 3cbcdd23bd530147afb5a08f81f59718 344 Gene3D G3DSA:3.20.20.100 1 344 2.5E-132 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily vfu_A01288 6d526a0f8999ef5eca0e0987de32e5ca 601 PIRSF PIRSF004950 6 599 2.8E-238 T 12-10-2018 IPR012159 Inner membrane protein YejM vfu_A01288 6d526a0f8999ef5eca0e0987de32e5ca 601 Pfam PF00884 Sulfatase 259 514 1.1E-22 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 vfu_A01288 6d526a0f8999ef5eca0e0987de32e5ca 601 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.8E-98 T 12-10-2018 IPR024588 Inner membrane protein YejM, N-terminal vfu_A01288 6d526a0f8999ef5eca0e0987de32e5ca 601 SUPERFAMILY SSF53649 256 581 2.33E-51 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A01288 6d526a0f8999ef5eca0e0987de32e5ca 601 Gene3D G3DSA:3.40.720.10 248 525 4.6E-41 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_A00782 bc02d5b76efb5b0b05e4260574287f38 59 SUPERFAMILY SSF46955 3 56 2.56E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A00782 bc02d5b76efb5b0b05e4260574287f38 59 Pfam PF12728 Helix-turn-helix domain 4 52 1.3E-11 T 12-10-2018 vfu_A02179 9ce075a1e8701b98e5b03fd996dc47ab 513 Gene3D G3DSA:1.20.1250.20 267 501 6.0E-11 T 12-10-2018 vfu_A02179 9ce075a1e8701b98e5b03fd996dc47ab 513 Pfam PF07690 Major Facilitator Superfamily 15 409 6.7E-19 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A02179 9ce075a1e8701b98e5b03fd996dc47ab 513 Gene3D G3DSA:1.20.1250.20 2 187 2.3E-7 T 12-10-2018 vfu_A02179 9ce075a1e8701b98e5b03fd996dc47ab 513 SUPERFAMILY SSF103473 5 504 2.44E-22 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A02226 ac623191ac369d295e97d1c0a9389fbf 133 SUPERFAMILY SSF54637 9 131 8.49E-38 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A02226 ac623191ac369d295e97d1c0a9389fbf 133 Gene3D G3DSA:3.10.129.10 1 133 2.4E-39 T 12-10-2018 vfu_A02226 ac623191ac369d295e97d1c0a9389fbf 133 Pfam PF03061 Thioesterase superfamily 26 98 5.7E-20 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 vfu_B00790 13d0d1eba2a5db008220404c5bd095bb 140 Pfam PF04965 Gene 25-like lysozyme 17 114 3.2E-13 T 12-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD vfu_B00790 13d0d1eba2a5db008220404c5bd095bb 140 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 132 6.1E-17 T 12-10-2018 IPR017737 Type VI secretion system, lysozyme-related protein vfu_B00879 5158a38c464fa82cca0f332523ec057e 177 Pfam PF05068 Mannitol repressor 7 172 1.7E-59 T 12-10-2018 IPR007761 Mannitol repressor MtlR-like vfu_B00879 5158a38c464fa82cca0f332523ec057e 177 Gene3D G3DSA:1.20.120.330 1 173 1.1E-67 T 12-10-2018 vfu_B00879 5158a38c464fa82cca0f332523ec057e 177 SUPERFAMILY SSF158668 5 172 1.16E-57 T 12-10-2018 IPR038026 MtlR-like superfamily vfu_B01465 6efb4b8abb5b5760bfb4159c4aa14429 363 Gene3D G3DSA:3.40.50.970 1 350 4.5E-99 T 12-10-2018 vfu_B01465 6efb4b8abb5b5760bfb4159c4aa14429 363 Pfam PF00676 Dehydrogenase E1 component 36 319 7.8E-74 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 vfu_B01465 6efb4b8abb5b5760bfb4159c4aa14429 363 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 8 349 4.4E-133 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 vfu_B01465 6efb4b8abb5b5760bfb4159c4aa14429 363 SUPERFAMILY SSF52518 27 351 1.29E-89 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold vfu_B01480 7eb03b5ca0208614a88db1abedfcd43b 195 PIRSF PIRSF006324 1 195 4.8E-51 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B01480 7eb03b5ca0208614a88db1abedfcd43b 195 Pfam PF01810 LysE type translocator 2 193 7.2E-46 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B00369 718149ac53855e1d84dae24f6824fc67 152 SUPERFAMILY SSF46955 88 134 8.61E-6 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 Gene3D G3DSA:3.40.50.620 1 142 7.0E-40 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 Pfam PF00582 Universal stress protein family 1 142 3.2E-35 T 12-10-2018 IPR006016 UspA vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 PRINTS PR01438 Universal stress protein signature 102 114 3.4E-12 T 12-10-2018 IPR006015 Universal stress protein A vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 PRINTS PR01438 Universal stress protein signature 2 20 3.4E-12 T 12-10-2018 IPR006015 Universal stress protein A vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 PRINTS PR01438 Universal stress protein signature 120 142 3.4E-12 T 12-10-2018 IPR006015 Universal stress protein A vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 SUPERFAMILY SSF52402 2 143 2.98E-39 T 12-10-2018 vfu_A03089 157f1c0d24a6db8a4b2cd3f695bab54a 145 PIRSF PIRSF006276 1 145 1.3E-22 T 12-10-2018 IPR006015 Universal stress protein A vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 Gene3D G3DSA:3.40.50.300 3 325 4.5E-91 T 12-10-2018 vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 SUPERFAMILY SSF52540 5 252 6.95E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 Pfam PF00005 ABC transporter 26 181 3.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 4.1E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 SMART SM00382 34 231 1.4E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A00912 60bacd791a3cf1245d9ddb4347861a30 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 1.3E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A00416 3d182e404f860ba6cb08c75f20599762 133 Pfam PF02416 mttA/Hcf106 family 4 38 7.2E-6 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 vfu_A00416 3d182e404f860ba6cb08c75f20599762 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.1E-26 T 12-10-2018 vfu_A00416 3d182e404f860ba6cb08c75f20599762 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.1E-26 T 12-10-2018 vfu_A00416 3d182e404f860ba6cb08c75f20599762 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.1E-26 T 12-10-2018 vfu_A00416 3d182e404f860ba6cb08c75f20599762 133 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 5.2E-34 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 vfu_A00416 3d182e404f860ba6cb08c75f20599762 133 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 133 18.007 T 12-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 vfu_A00711 dbcf39d87935a8318b6e1c320816b9b9 220 Pfam PF10986 Protein of unknown function (DUF2796) 29 140 1.6E-30 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 vfu_A00711 dbcf39d87935a8318b6e1c320816b9b9 220 Pfam PF10986 Protein of unknown function (DUF2796) 133 216 1.9E-19 T 12-10-2018 IPR021253 Protein of unknown function DUF2796 vfu_A00011 3a156de05fd85ccebb11bf6e5bd3c81b 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 2.1E-24 T 12-10-2018 IPR019201 Protein of unknown function DUF2065 vfu_A01679 0eed6568046e8c64e94a350c33897f53 147 Pfam PF03724 META domain 33 139 2.1E-27 T 12-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ vfu_A01679 0eed6568046e8c64e94a350c33897f53 147 Gene3D G3DSA:2.40.128.270 39 142 2.3E-29 T 12-10-2018 IPR038670 HslJ-like superfamily vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 Gene3D G3DSA:3.40.50.300 2 222 1.4E-72 T 12-10-2018 vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.537 T 12-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 Pfam PF00271 Helicase conserved C-terminal domain 243 351 6.3E-31 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 Gene3D G3DSA:3.40.50.300 229 417 7.9E-47 T 12-10-2018 vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.5E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 SMART SM00490 270 351 3.8E-33 T 12-10-2018 IPR001650 Helicase, C-terminal vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 SMART SM00487 28 234 2.3E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain vfu_A00060 439ab0546151a73dad8a28d49fd9b82e 435 SUPERFAMILY SSF52540 85 362 2.23E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00701 3e40dba9964c2c192a2eb1aadec905d1 199 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 126 1.9E-29 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 vfu_A00701 3e40dba9964c2c192a2eb1aadec905d1 199 SUPERFAMILY SSF52402 6 124 9.61E-37 T 12-10-2018 vfu_A00701 3e40dba9964c2c192a2eb1aadec905d1 199 Gene3D G3DSA:3.40.50.620 7 178 1.2E-33 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 39 142 1.4E-17 T 12-10-2018 IPR007831 General secretory system II, protein E, N-terminal vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 Gene3D G3DSA:3.40.50.300 289 561 4.3E-104 T 12-10-2018 vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 Gene3D G3DSA:3.30.450.90 151 288 2.1E-46 T 12-10-2018 vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 SUPERFAMILY SSF160246 1 140 1.91E-32 T 12-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 Pfam PF00437 Type II/IV secretion system protein 188 455 2.0E-88 T 12-10-2018 IPR001482 Type II/IV secretion system protein vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 SUPERFAMILY SSF52540 172 559 2.25E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 Gene3D G3DSA:3.30.300.160 61 140 8.0E-8 T 12-10-2018 vfu_A00871 b1eb6a315daf76299f53a21bbb3d3bf1 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 3.7E-239 T 12-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 vfu_A01153 2139e01110a7533a16312f8dba561a7e 191 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 12-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 vfu_A01153 2139e01110a7533a16312f8dba561a7e 191 Pfam PF03358 NADPH-dependent FMN reductase 48 135 2.4E-11 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 vfu_A01153 2139e01110a7533a16312f8dba561a7e 191 SUPERFAMILY SSF52218 4 188 5.77E-55 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01153 2139e01110a7533a16312f8dba561a7e 191 Gene3D G3DSA:3.40.50.360 2 191 1.3E-60 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01632 b8657d31237659bc576343e82234255b 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 5.3E-108 T 12-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase vfu_A01632 b8657d31237659bc576343e82234255b 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 1.3E-56 T 12-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices vfu_B00601 496ee98e1fc573a7c4182f33f9aa9d6e 109 Pfam PF15941 FidL-like putative membrane protein 21 105 1.1E-26 T 12-10-2018 IPR031854 Putative membrane protein FidL-like vfu_A02618 36ed2ba0aaf2135879944b22b82402e0 91 SUPERFAMILY SSF52833 5 87 4.92E-29 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_A02618 36ed2ba0aaf2135879944b22b82402e0 91 Pfam PF10262 Rdx family 6 78 1.2E-31 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type vfu_A02618 36ed2ba0aaf2135879944b22b82402e0 91 Gene3D G3DSA:3.40.30.10 1 91 2.1E-40 T 12-10-2018 vfu_A02618 36ed2ba0aaf2135879944b22b82402e0 91 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 78 2.4E-23 T 12-10-2018 IPR011893 Selenoprotein, Rdx-type vfu_A01209 828c89d3cec7185c5b48b0d553c3359d 176 Pfam PF04315 Elongation factor P hydroxylase 11 173 1.4E-72 T 12-10-2018 IPR007411 Elongation factor P hydroxylase vfu_A00007 3926f33e9666a30836233ea8753e1323 221 Pfam PF08348 YheO-like PAS domain 12 120 4.4E-36 T 12-10-2018 IPR013559 YheO-like vfu_A00007 3926f33e9666a30836233ea8753e1323 221 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 11 124 2.0E-61 T 12-10-2018 IPR013559 YheO-like vfu_A00007 3926f33e9666a30836233ea8753e1323 221 Pfam PF13309 HTH domain 155 212 5.8E-18 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 Gene3D G3DSA:1.10.10.10 3 79 3.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 Gene3D G3DSA:3.30.420.40 90 384 6.9E-94 T 12-10-2018 vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 Pfam PF00480 ROK family 86 390 1.2E-74 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 SUPERFAMILY SSF46785 11 75 6.07E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 Gene3D G3DSA:3.30.420.40 207 376 6.9E-94 T 12-10-2018 vfu_A02607 eb7b48048660f403efab6a2463bf3eb2 404 SUPERFAMILY SSF53067 85 391 4.11E-56 T 12-10-2018 vfu_A00024 fd0714168d6273e6093e90e0df258c5c 285 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 2.0E-84 T 12-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 vfu_A00024 fd0714168d6273e6093e90e0df258c5c 285 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 47.916 T 12-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 vfu_A00024 fd0714168d6273e6093e90e0df258c5c 285 Pfam PF02666 Phosphatidylserine decarboxylase 62 270 5.6E-59 T 12-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 vfu_A00184 b378d6b33959f60c4c7838e18d704b9d 92 Pfam PF01527 Transposase 4 70 1.0E-15 T 12-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 vfu_A00184 b378d6b33959f60c4c7838e18d704b9d 92 SUPERFAMILY SSF46689 1 89 5.73E-21 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A00184 b378d6b33959f60c4c7838e18d704b9d 92 Gene3D G3DSA:1.10.10.60 7 88 1.8E-9 T 12-10-2018 vfu_B01058 cbf465d2d96c438916fe3225261c5199 125 PIRSF PIRSF028770 1 125 4.1E-66 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 vfu_B01058 cbf465d2d96c438916fe3225261c5199 125 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.4E-40 T 12-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 vfu_A03073 35116b1d3fa267ba57d9e11b162bc016 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 31.533 T 12-10-2018 IPR023065 Uncharacterised protein family ApaG vfu_A03073 35116b1d3fa267ba57d9e11b162bc016 126 Gene3D G3DSA:2.60.40.1470 1 126 4.0E-47 T 12-10-2018 IPR036767 ApaG domain superfamily vfu_A03073 35116b1d3fa267ba57d9e11b162bc016 126 SUPERFAMILY SSF110069 6 126 3.27E-47 T 12-10-2018 IPR036767 ApaG domain superfamily vfu_A03073 35116b1d3fa267ba57d9e11b162bc016 126 Pfam PF04379 ApaG domain 18 103 2.8E-33 T 12-10-2018 IPR007474 ApaG domain vfu_A01374 c3ec71105e78383a089a0d69a101c6f3 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 35 159 5.3E-29 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_B00788 e6ddb17986e95278346f1dc360735edd 341 Pfam PF06996 Type VI secretion, TssG 17 311 6.1E-56 T 12-10-2018 IPR010732 Type VI secretion, TssG-like vfu_A01349 de84efd53418fc529e07032cc4a4acdc 105 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 1.1E-34 T 12-10-2018 IPR023163 SMc04008-like domain vfu_A01349 de84efd53418fc529e07032cc4a4acdc 105 Gene3D G3DSA:1.10.3340.10 4 105 5.2E-45 T 12-10-2018 IPR036810 SMc04008-like superfamily vfu_A01349 de84efd53418fc529e07032cc4a4acdc 105 SUPERFAMILY SSF158757 8 84 1.27E-35 T 12-10-2018 IPR036810 SMc04008-like superfamily vfu_B00186 c008def343f697d18a1635e349cddc7d 163 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 9 162 1.0E-41 T 12-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 vfu_B00186 c008def343f697d18a1635e349cddc7d 163 Gene3D G3DSA:1.10.3330.10 11 163 7.8E-50 T 12-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 vfu_B00186 c008def343f697d18a1635e349cddc7d 163 SUPERFAMILY SSF158694 17 162 4.19E-37 T 12-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 vfu_B00186 c008def343f697d18a1635e349cddc7d 163 Pfam PF09349 OHCU decarboxylase 12 159 8.3E-34 T 12-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 vfu_B01130 df46ebf0258a511aa42d425e3f18c039 255 SUPERFAMILY SSF100950 75 228 4.5E-22 T 12-10-2018 IPR037171 NagB/RpiA transferase-like vfu_B01130 df46ebf0258a511aa42d425e3f18c039 255 Pfam PF00455 DeoR C terminal sensor domain 75 227 2.9E-40 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain vfu_B01130 df46ebf0258a511aa42d425e3f18c039 255 SUPERFAMILY SSF46785 4 73 9.26E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B01130 df46ebf0258a511aa42d425e3f18c039 255 SMART SM00420 6 58 3.8E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B01130 df46ebf0258a511aa42d425e3f18c039 255 Pfam PF08220 DeoR-like helix-turn-helix domain 8 58 1.9E-11 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 vfu_B01130 df46ebf0258a511aa42d425e3f18c039 255 SMART SM01134 71 229 1.5E-51 T 12-10-2018 vfu_A01535 42661ca1b1e69c72468b8cf37418b772 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 3.6E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01535 42661ca1b1e69c72468b8cf37418b772 300 SUPERFAMILY SSF161098 96 281 9.68E-27 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01535 42661ca1b1e69c72468b8cf37418b772 300 Gene3D G3DSA:1.10.3720.10 93 296 8.3E-20 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01535 42661ca1b1e69c72468b8cf37418b772 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 76 3.9E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain vfu_A02282 135bed77748059d2958da5e9c5ffe18e 511 SUPERFAMILY SSF141868 250 496 1.44E-67 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A02282 135bed77748059d2958da5e9c5ffe18e 511 Pfam PF00563 EAL domain 251 484 1.2E-57 T 12-10-2018 IPR001633 EAL domain vfu_A02282 135bed77748059d2958da5e9c5ffe18e 511 SMART SM00052 244 489 7.3E-81 T 12-10-2018 IPR001633 EAL domain vfu_A02282 135bed77748059d2958da5e9c5ffe18e 511 Gene3D G3DSA:3.20.20.450 246 499 2.6E-72 T 12-10-2018 IPR035919 EAL domain superfamily vfu_A01983 78a656bf4595c8b579ac57d4147f6809 642 Gene3D G3DSA:3.60.21.70 302 556 1.7E-8 T 12-10-2018 IPR038607 PhoD-like superfamily vfu_A01983 78a656bf4595c8b579ac57d4147f6809 642 SUPERFAMILY SSF56300 152 530 8.35E-8 T 12-10-2018 vfu_A01983 78a656bf4595c8b579ac57d4147f6809 642 Pfam PF09423 PhoD-like phosphatase 310 577 5.1E-7 T 12-10-2018 IPR018946 Alkaline phosphatase D-related vfu_B00524 8815699ff0b16614401a8dc97398098a 426 Pfam PF13487 HD domain 91 147 8.8E-11 T 12-10-2018 vfu_B00524 8815699ff0b16614401a8dc97398098a 426 SUPERFAMILY SSF109604 1 184 7.22E-7 T 12-10-2018 vfu_B00524 8815699ff0b16614401a8dc97398098a 426 TIGRFAM TIGR00277 HDIG: HDIG domain 245 334 3.3E-8 T 12-10-2018 IPR006675 HDIG domain vfu_B00524 8815699ff0b16614401a8dc97398098a 426 SUPERFAMILY SSF109604 230 403 4.07E-36 T 12-10-2018 vfu_B00524 8815699ff0b16614401a8dc97398098a 426 SMART SM00471 239 374 3.4E-10 T 12-10-2018 IPR003607 HD/PDEase domain vfu_B00524 8815699ff0b16614401a8dc97398098a 426 Gene3D G3DSA:1.10.3210.10 222 415 1.3E-56 T 12-10-2018 vfu_B00524 8815699ff0b16614401a8dc97398098a 426 Pfam PF01966 HD domain 245 364 3.1E-18 T 12-10-2018 IPR006674 HD domain vfu_B00401 dbbd90e08d367888c23a3a68e70ff34f 377 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 91 254 1.4E-13 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain vfu_B00401 dbbd90e08d367888c23a3a68e70ff34f 377 Pfam PF17482 Phage tail sheath C-terminal domain 264 376 7.1E-14 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 Gene3D G3DSA:1.10.10.10 5 90 1.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.2E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 Gene3D G3DSA:3.40.190.10 102 290 1.6E-35 T 12-10-2018 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.8E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 Gene3D G3DSA:3.40.190.10 163 263 1.6E-35 T 12-10-2018 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 SUPERFAMILY SSF53850 93 296 3.98E-29 T 12-10-2018 vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 Pfam PF03466 LysR substrate binding domain 92 294 3.2E-28 T 12-10-2018 IPR005119 LysR, substrate-binding vfu_B00771 d66c91efb5d8cf016a996aee78c71682 298 SUPERFAMILY SSF46785 5 112 1.36E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_B00511 6a72dee29dc95178691d3a93396806c2 170 Pfam PF01467 Cytidylyltransferase-like 7 145 1.7E-6 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 vfu_B00511 6a72dee29dc95178691d3a93396806c2 170 SUPERFAMILY SSF52374 1 170 3.13E-25 T 12-10-2018 vfu_B00511 6a72dee29dc95178691d3a93396806c2 170 Gene3D G3DSA:3.40.50.620 1 170 8.1E-44 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02401 b919ed04fe3ca104d9f22319e5c252bd 196 Gene3D G3DSA:3.40.50.10610 39 188 5.4E-43 T 12-10-2018 vfu_A02401 b919ed04fe3ca104d9f22319e5c252bd 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 6.1E-54 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB vfu_A02401 b919ed04fe3ca104d9f22319e5c252bd 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.1E-74 T 12-10-2018 IPR014094 Penicillin-binding protein activator LpoB vfu_A00240 8248dfc183500f48137a637d01462125 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 187 8.0E-15 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 vfu_A00240 8248dfc183500f48137a637d01462125 190 SUPERFAMILY SSF88659 127 188 4.11E-5 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like vfu_A00240 8248dfc183500f48137a637d01462125 190 Gene3D G3DSA:1.10.10.10 132 189 2.8E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00240 8248dfc183500f48137a637d01462125 190 Pfam PF07638 ECF sigma factor 6 189 1.1E-30 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like vfu_A00240 8248dfc183500f48137a637d01462125 190 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 4 189 9.8E-53 T 12-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like vfu_B00417 d98907de31f3ef9f2bcb1fa14867c6f1 491 Pfam PF02449 Beta-galactosidase 84 199 7.8E-6 T 12-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 vfu_B00417 d98907de31f3ef9f2bcb1fa14867c6f1 491 Pfam PF16116 Domain of unknown function (DUF4832) 331 474 5.9E-16 T 12-10-2018 IPR032267 Domain of unknown function DUF4832 vfu_B00417 d98907de31f3ef9f2bcb1fa14867c6f1 491 SUPERFAMILY SSF51445 87 282 6.91E-10 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 SUPERFAMILY SSF46785 17 102 1.48E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 SMART SM00418 22 101 3.7E-16 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 3.3E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 3.3E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 72 87 3.3E-5 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 Pfam PF12840 Helix-turn-helix domain 22 77 3.1E-9 T 12-10-2018 vfu_A02189 bdbb87da7e25601b709f92e297256ad5 236 Gene3D G3DSA:1.10.10.10 2 116 2.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02288 6caafe57b7cb6f4efbd02ef1bb5432dc 140 Gene3D G3DSA:3.10.180.10 2 132 1.2E-33 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A02288 6caafe57b7cb6f4efbd02ef1bb5432dc 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.5E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain vfu_A02288 6caafe57b7cb6f4efbd02ef1bb5432dc 140 SUPERFAMILY SSF54593 3 133 2.28E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase vfu_A00244 98f428ec3ac81512f685c32ce5d68546 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 5.4E-9 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain vfu_A00244 98f428ec3ac81512f685c32ce5d68546 312 SUPERFAMILY SSF161098 93 295 5.1E-25 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00244 98f428ec3ac81512f685c32ce5d68546 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 5.6E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00244 98f428ec3ac81512f685c32ce5d68546 312 Gene3D G3DSA:1.10.3720.10 86 306 1.0E-24 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01789 cd0260eb06e0c27f1426af1b4cfc4ac0 196 Pfam PF13023 HD domain 16 178 1.0E-52 T 12-10-2018 IPR006674 HD domain vfu_A01789 cd0260eb06e0c27f1426af1b4cfc4ac0 196 Gene3D G3DSA:1.10.3210.10 2 196 8.6E-56 T 12-10-2018 vfu_A01789 cd0260eb06e0c27f1426af1b4cfc4ac0 196 SUPERFAMILY SSF109604 6 185 1.19E-43 T 12-10-2018 vfu_A01400 ce9852ebaeb071e1ba37c749b84c8bc9 272 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 262 7.6E-11 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) vfu_A01400 ce9852ebaeb071e1ba37c749b84c8bc9 272 SUPERFAMILY SSF101801 197 264 6.28E-9 T 12-10-2018 IPR036429 SpoA-like superfamily vfu_B00950 b156365439d0358e486864c5d0c92b01 500 Pfam PF02447 GntP family permease 6 460 4.9E-121 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_B00950 b156365439d0358e486864c5d0c92b01 500 PIRSF PIRSF002746 1 462 1.5E-132 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_A00449 5f2bb0ccb09c3afb8c99d40c46cc5cb0 205 Pfam PF01810 LysE type translocator 15 202 3.3E-36 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A00449 5f2bb0ccb09c3afb8c99d40c46cc5cb0 205 PIRSF PIRSF006324 1 205 1.4E-55 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A02722 c15310f5050eaa811d9147865dcbe954 138 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.2E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A02722 c15310f5050eaa811d9147865dcbe954 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A02722 c15310f5050eaa811d9147865dcbe954 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 8.0E-6 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A01380 04b05a3ed455558b90932456f3af270a 100 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 85 1.0E-7 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family vfu_A01380 04b05a3ed455558b90932456f3af270a 100 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 5.3E-19 T 12-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family vfu_A01380 04b05a3ed455558b90932456f3af270a 100 SUPERFAMILY SSF143011 1 89 3.26E-5 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily vfu_A01380 04b05a3ed455558b90932456f3af270a 100 Gene3D G3DSA:3.30.2310.20 1 96 9.8E-21 T 12-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily vfu_A00187 c1bc53adba045a702bd54d941316bf0d 123 Pfam PF11777 Protein of unknown function (DUF3316) 5 117 5.0E-20 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_A00187 c1bc53adba045a702bd54d941316bf0d 123 PIRSF PIRSF028299 3 123 1.8E-28 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 47 121 4.7E-15 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 PRINTS PR00607 Class IE cytochrome C signature 111 122 8.1E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 PRINTS PR00607 Class IE cytochrome C signature 68 78 8.1E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 PRINTS PR00607 Class IE cytochrome C signature 57 68 8.1E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 PRINTS PR00607 Class IE cytochrome C signature 96 108 8.1E-14 T 12-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 SUPERFAMILY SSF46626 48 122 5.11E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_A00249 c2a640caf816c5278c21b7e92c63b8b0 125 Gene3D G3DSA:1.10.760.10 47 124 2.7E-31 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B00839 308bd2d8a3090274563ae0215790e614 333 SUPERFAMILY SSF81345 7 331 1.26E-76 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00839 308bd2d8a3090274563ae0215790e614 333 Gene3D G3DSA:1.10.3470.10 8 333 1.3E-92 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_B00839 308bd2d8a3090274563ae0215790e614 333 Pfam PF01032 FecCD transport family 20 331 5.2E-91 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_A00872 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00872 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 Gene3D G3DSA:3.30.700.10 12 149 2.9E-25 T 12-10-2018 vfu_A00872 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 1.9E-11 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00872 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 Pfam PF00114 Pilin (bacterial filament) 40 149 4.7E-8 T 12-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 vfu_A00872 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 2.9E-10 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site vfu_A00872 ad5c8d0382d5024fdd7f4b7eed37b6ad 149 SUPERFAMILY SSF54523 12 142 1.62E-18 T 12-10-2018 vfu_A00570 9f29ec1ff1b09362d72d5b786fb45e11 157 SUPERFAMILY SSF75217 2 155 3.99E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_A00570 9f29ec1ff1b09362d72d5b786fb45e11 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 154 32.622 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 vfu_A00570 9f29ec1ff1b09362d72d5b786fb45e11 157 Gene3D G3DSA:3.40.1280.10 1 157 2.4E-63 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_A00570 9f29ec1ff1b09362d72d5b786fb45e11 157 PIRSF PIRSF029256 1 157 1.7E-65 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 vfu_A00570 9f29ec1ff1b09362d72d5b786fb45e11 157 Pfam PF00588 SpoU rRNA Methylase family 3 144 2.5E-34 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 vfu_A00570 9f29ec1ff1b09362d72d5b786fb45e11 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 155 3.1E-57 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 vfu_A01998 26e572976fd3d7455a0e146e9ea4bc6e 306 Gene3D G3DSA:3.40.50.1820 4 306 8.0E-76 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01998 26e572976fd3d7455a0e146e9ea4bc6e 306 Pfam PF07859 alpha/beta hydrolase fold 81 284 2.9E-63 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 vfu_A01998 26e572976fd3d7455a0e146e9ea4bc6e 306 SUPERFAMILY SSF53474 24 304 2.73E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00456 915871b693f38c0953d3e39274ba9090 196 Pfam PF01757 Acyltransferase family 1 193 1.2E-20 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 vfu_A02776 4b152149c30b0eb17e34aeadaeed0725 254 Pfam PF04551 GcpE protein 14 251 1.2E-97 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 vfu_A02776 4b152149c30b0eb17e34aeadaeed0725 254 SUPERFAMILY SSF51717 15 208 2.43E-11 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_A02776 4b152149c30b0eb17e34aeadaeed0725 254 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 251 1.6E-93 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 vfu_A02776 4b152149c30b0eb17e34aeadaeed0725 254 Gene3D G3DSA:3.20.20.20 1 254 1.2E-101 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 vfu_B00694 972363926668ff8d58d8785402af4459 307 SUPERFAMILY SSF53300 91 236 4.13E-8 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily vfu_B00694 972363926668ff8d58d8785402af4459 307 Pfam PF01882 Protein of unknown function DUF58 55 139 5.1E-23 T 12-10-2018 IPR002881 Domain of unknown function DUF58 vfu_A01117 2c134de857bbe9a55fec87d8fb343f8e 218 Pfam PF13144 Chaperone for flagella basal body P-ring formation 19 216 6.9E-52 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal vfu_A01117 2c134de857bbe9a55fec87d8fb343f8e 218 SMART SM00858 96 158 3.1E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 vfu_A01117 2c134de857bbe9a55fec87d8fb343f8e 218 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 84 217 4.3E-38 T 12-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal vfu_A01117 2c134de857bbe9a55fec87d8fb343f8e 218 Gene3D G3DSA:2.30.30.760 157 218 1.8E-12 T 12-10-2018 vfu_A00958 100ffa20bb93faea43765c45d7be3d2f 239 Gene3D G3DSA:3.40.50.150 7 234 4.6E-56 T 12-10-2018 vfu_A00958 100ffa20bb93faea43765c45d7be3d2f 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 vfu_A00958 100ffa20bb93faea43765c45d7be3d2f 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 52.912 T 12-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 vfu_A00958 100ffa20bb93faea43765c45d7be3d2f 239 Pfam PF05175 Methyltransferase small domain 43 145 1.1E-18 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 vfu_A00958 100ffa20bb93faea43765c45d7be3d2f 239 SUPERFAMILY SSF53335 34 185 1.84E-29 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A02918 db7ed10922630167b1a844e274e38a86 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 2.5E-42 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 vfu_A00006 f03871dc1bb97b74d684814cd5b9631c 130 Pfam PF02635 DsrE/DsrF-like family 5 130 1.2E-26 T 12-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein vfu_A00006 f03871dc1bb97b74d684814cd5b9631c 130 SUPERFAMILY SSF75169 5 130 4.32E-35 T 12-10-2018 IPR027396 DsrEFH-like vfu_A00006 f03871dc1bb97b74d684814cd5b9631c 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 130 3.8E-54 T 12-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 vfu_A00006 f03871dc1bb97b74d684814cd5b9631c 130 Gene3D G3DSA:3.40.1260.10 1 130 9.5E-53 T 12-10-2018 IPR027396 DsrEFH-like vfu_A02933 f71b3d5dfee8583f9d697a5f9dbf6937 397 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 390 41.25 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02933 f71b3d5dfee8583f9d697a5f9dbf6937 397 Pfam PF01098 Cell cycle protein 26 381 1.4E-115 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02933 f71b3d5dfee8583f9d697a5f9dbf6937 397 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 2.8E-130 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_A02933 f71b3d5dfee8583f9d697a5f9dbf6937 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 vfu_B00352 9b03003abc1261f17503eab8cc32b68a 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 229 1.0E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00352 9b03003abc1261f17503eab8cc32b68a 236 Gene3D G3DSA:1.10.3720.10 3 231 6.3E-60 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00352 9b03003abc1261f17503eab8cc32b68a 236 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 17 227 4.7E-73 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 vfu_B00352 9b03003abc1261f17503eab8cc32b68a 236 SUPERFAMILY SSF161098 9 224 9.68E-50 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01545 218ef6e713cd6c060c8b993ee1c6a299 323 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 268 3.1E-28 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_A01221 1047cce32ea11bba041730fe9343658f 231 Pfam PF04172 LrgB-like family 16 226 6.1E-70 T 12-10-2018 IPR007300 CidB/LrgB family vfu_B00522 acd5278417c1f9c902fcc08630bdc0c6 214 Gene3D G3DSA:2.40.160.20 22 214 1.2E-79 T 12-10-2018 vfu_B00522 acd5278417c1f9c902fcc08630bdc0c6 214 SUPERFAMILY SSF56925 23 214 8.89E-32 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_B00522 acd5278417c1f9c902fcc08630bdc0c6 214 Pfam PF03922 OmpW family 23 214 5.7E-72 T 12-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 vfu_B00981 e09d7fe14b17386cb5bef15512ff9f14 154 Pfam PF01584 CheW-like domain 5 141 1.8E-31 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_B00981 e09d7fe14b17386cb5bef15512ff9f14 154 SMART SM00260 1 139 1.8E-29 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 vfu_B00981 e09d7fe14b17386cb5bef15512ff9f14 154 Gene3D G3DSA:2.30.30.40 8 133 2.2E-35 T 12-10-2018 vfu_B00981 e09d7fe14b17386cb5bef15512ff9f14 154 SUPERFAMILY SSF50341 2 142 2.22E-34 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 vfu_B00981 e09d7fe14b17386cb5bef15512ff9f14 154 Gene3D G3DSA:2.40.50.180 24 134 2.2E-35 T 12-10-2018 vfu_A02070 c4186f275996e8b2a7341acc38d84434 479 Pfam PF02321 Outer membrane efflux protein 26 243 2.4E-21 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A02070 c4186f275996e8b2a7341acc38d84434 479 Pfam PF02321 Outer membrane efflux protein 266 445 3.8E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A02070 c4186f275996e8b2a7341acc38d84434 479 SUPERFAMILY SSF56954 2 446 3.27E-66 T 12-10-2018 vfu_A02070 c4186f275996e8b2a7341acc38d84434 479 Gene3D G3DSA:1.20.1600.10 22 451 5.8E-61 T 12-10-2018 vfu_A01643 b328e6752f81f22d2a331e6d445edb93 77 Pfam PF06146 Phosphate-starvation-inducible E 9 68 1.5E-9 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like vfu_A01643 b328e6752f81f22d2a331e6d445edb93 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 8.9E-37 T 12-10-2018 IPR013468 Conserved hypothetical protein CHP02647 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 SUPERFAMILY SSF53774 3 336 1.06E-112 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 Pfam PF00710 Asparaginase, N-terminal 5 191 4.9E-68 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 5.4E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 5.4E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 5.4E-16 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 Gene3D G3DSA:3.40.50.40 210 337 2.0E-44 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 PIRSF PIRSF001220 1 335 2.3E-94 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 2.9E-115 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 Gene3D G3DSA:3.40.50.1170 1 209 6.0E-93 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 SMART SM00870 5 324 1.5E-138 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 vfu_A02484 d59a7a68f0cffab9ee70fac79162f1ee 337 PIRSF PIRSF500176 2 333 5.6E-109 T 12-10-2018 vfu_A02546 8510592b3892a099cb4ebdefbec40b70 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 8.7E-73 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 vfu_A02546 8510592b3892a099cb4ebdefbec40b70 181 SUPERFAMILY SSF53271 11 178 1.99E-51 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like vfu_A02546 8510592b3892a099cb4ebdefbec40b70 181 Gene3D G3DSA:3.40.50.2020 1 181 1.1E-66 T 12-10-2018 vfu_A02546 8510592b3892a099cb4ebdefbec40b70 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.806 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 vfu_A02546 8510592b3892a099cb4ebdefbec40b70 181 Pfam PF00156 Phosphoribosyl transferase domain 31 154 2.2E-13 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 vfu_B00932 0cd5886584757072d7fbf13549c124a8 96 SUPERFAMILY SSF54909 1 95 1.04E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel vfu_B00932 0cd5886584757072d7fbf13549c124a8 96 Gene3D G3DSA:3.30.70.100 1 96 4.8E-40 T 12-10-2018 vfu_B00932 0cd5886584757072d7fbf13549c124a8 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 5.6E-14 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain vfu_A01220 95fa65e96746a7feb2c7e355e14f212d 127 Pfam PF03788 LrgA family 13 106 7.2E-29 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 vfu_A02510 de3bbf2fe22ee4def546c1ff6f50aa05 151 Pfam PF10772 Protein of unknown function (DUF2597) 8 141 4.8E-63 T 12-10-2018 IPR019708 Bacteriophage HP1, Orf24 vfu_A02519 9fc98e8d0acb26d90ee77a75da222154 343 PIRSF PIRSF018494 2 342 1.0E-126 T 12-10-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria vfu_A02519 9fc98e8d0acb26d90ee77a75da222154 343 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 49 326 3.2E-65 T 12-10-2018 IPR006430 Phage portal protein PBSX family vfu_B00795 f5832e36262039442d095d2c430d39c9 444 Pfam PF06812 ImpA, N-terminal, type VI secretion system 6 152 1.4E-27 T 12-10-2018 IPR010657 ImpA, N-terminal vfu_A00093 d19001d6b4520df316f753b68b175c67 198 Pfam PF02169 LPP20 lipoprotein 43 154 5.8E-20 T 12-10-2018 IPR024952 Lipoprotein LPP20-like vfu_B00301 0150a122f5b5bb62b679fc3c0b85e399 157 Gene3D G3DSA:3.10.50.40 20 157 1.0E-56 T 12-10-2018 vfu_B00301 0150a122f5b5bb62b679fc3c0b85e399 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 66 154 9.8E-31 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain vfu_B00301 0150a122f5b5bb62b679fc3c0b85e399 157 SUPERFAMILY SSF54534 19 156 1.34E-53 T 12-10-2018 vfu_B00301 0150a122f5b5bb62b679fc3c0b85e399 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 1.2E-8 T 12-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 vfu_A00390 d2a01ddbe5aef67044c2c2dcb8ee4fa2 294 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 1.6E-71 T 12-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 vfu_A00390 d2a01ddbe5aef67044c2c2dcb8ee4fa2 294 SUPERFAMILY SSF103481 184 274 2.62E-5 T 12-10-2018 vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 Gene3D G3DSA:1.10.3720.10 285 530 5.6E-26 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 Gene3D G3DSA:1.10.3720.10 7 259 1.1E-41 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 9 518 1.2E-161 T 12-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 354 516 3.6E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 257 4.2E-8 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 SUPERFAMILY SSF161098 279 523 2.22E-32 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00724 35ea431312e9eebeb3a26639d15de951 536 SUPERFAMILY SSF161098 13 258 1.12E-41 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02756 615b1d7d3d85d06553b26510c3040b0f 679 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 199 355 4.9E-11 T 12-10-2018 IPR000477 Reverse transcriptase domain vfu_A01904 9022b76e84c7e4eba9577756ef828361 130 Pfam PF05751 FixH 3 117 9.5E-31 T 12-10-2018 IPR008620 Nitrogen fixation protein FixH vfu_B00643 06d245e9849a18fdea818bbb9d1a374c 121 Gene3D G3DSA:3.40.630.30 1 117 2.2E-28 T 12-10-2018 vfu_B00643 06d245e9849a18fdea818bbb9d1a374c 121 SUPERFAMILY SSF55729 2 80 2.36E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00643 06d245e9849a18fdea818bbb9d1a374c 121 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 1 113 4.5E-39 T 12-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 vfu_B00643 06d245e9849a18fdea818bbb9d1a374c 121 Pfam PF00583 Acetyltransferase (GNAT) family 1 79 3.9E-11 T 12-10-2018 IPR000182 GNAT domain vfu_A01041 3579b828abdf1bfddbb70c94365c6df3 302 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 1 263 2.0E-66 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 vfu_A01041 3579b828abdf1bfddbb70c94365c6df3 302 PIRSF PIRSF039012 1 271 8.3E-83 T 12-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 vfu_A01041 3579b828abdf1bfddbb70c94365c6df3 302 SUPERFAMILY SSF53187 1 265 1.55E-69 T 12-10-2018 vfu_A01041 3579b828abdf1bfddbb70c94365c6df3 302 Gene3D G3DSA:3.40.630.10 1 266 6.2E-86 T 12-10-2018 vfu_A02212 9cd87c1239cbf4cc03f19cc1704cc915 130 Gene3D G3DSA:3.30.1330.40 16 129 5.3E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_A02212 9cd87c1239cbf4cc03f19cc1704cc915 130 Pfam PF01042 Endoribonuclease L-PSP 20 123 1.4E-22 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 vfu_A02212 9cd87c1239cbf4cc03f19cc1704cc915 130 SUPERFAMILY SSF55298 18 127 2.36E-31 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 vfu_B01350 4e6b075a4c0bd0678ed7d0779e2c33d9 124 Gene3D G3DSA:1.10.10.10 1 123 1.4E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_B01350 4e6b075a4c0bd0678ed7d0779e2c33d9 124 Pfam PF02082 Transcriptional regulator 5 65 8.7E-17 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type vfu_B01350 4e6b075a4c0bd0678ed7d0779e2c33d9 124 SUPERFAMILY SSF46785 6 118 6.94E-27 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A02475 5fd7e7d802b2ff794a293fd81629fd9f 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 7.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02475 5fd7e7d802b2ff794a293fd81629fd9f 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 7.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02475 5fd7e7d802b2ff794a293fd81629fd9f 285 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 7.2E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02475 5fd7e7d802b2ff794a293fd81629fd9f 285 Pfam PF12697 Alpha/beta hydrolase family 29 272 5.7E-18 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 vfu_A02475 5fd7e7d802b2ff794a293fd81629fd9f 285 Gene3D G3DSA:3.40.50.1820 2 278 4.3E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02475 5fd7e7d802b2ff794a293fd81629fd9f 285 SUPERFAMILY SSF53474 9 283 4.15E-46 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A00465 4046360cd2ab745b544be3b62d875172 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 1.7E-17 T 12-10-2018 IPR009525 Protein of unknown function DUF1145 vfu_A01312 f6b06f01b5f84c7c0b7c059410493d60 337 Gene3D G3DSA:3.30.160.60 73 110 3.3E-10 T 12-10-2018 vfu_A01312 f6b06f01b5f84c7c0b7c059410493d60 337 Gene3D G3DSA:3.30.160.60 302 337 2.2E-18 T 12-10-2018 vfu_A01312 f6b06f01b5f84c7c0b7c059410493d60 337 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 6 333 33.365 T 12-10-2018 IPR003770 Endolytic murein transglycosylase vfu_A01312 f6b06f01b5f84c7c0b7c059410493d60 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 5 336 5.4E-98 T 12-10-2018 IPR003770 Endolytic murein transglycosylase vfu_A01312 f6b06f01b5f84c7c0b7c059410493d60 337 Pfam PF02618 YceG-like family 43 328 4.1E-83 T 12-10-2018 IPR003770 Endolytic murein transglycosylase vfu_A01532 0ecea657c5814df2b9b54641aa219c2d 413 Pfam PF01494 FAD binding domain 7 166 2.0E-18 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 vfu_A01532 0ecea657c5814df2b9b54641aa219c2d 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.3E-7 T 12-10-2018 vfu_A01532 0ecea657c5814df2b9b54641aa219c2d 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.3E-7 T 12-10-2018 vfu_A01532 0ecea657c5814df2b9b54641aa219c2d 413 SUPERFAMILY SSF51905 5 359 2.98E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01532 0ecea657c5814df2b9b54641aa219c2d 413 Gene3D G3DSA:3.50.50.60 4 413 2.5E-125 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B01224 2dcba90bc718b0ecfc1914987251d889 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 277 3.9E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01224 2dcba90bc718b0ecfc1914987251d889 294 Gene3D G3DSA:1.10.3720.10 45 284 2.1E-68 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01224 2dcba90bc718b0ecfc1914987251d889 294 SUPERFAMILY SSF161098 50 275 1.57E-58 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01224 2dcba90bc718b0ecfc1914987251d889 294 SUPERFAMILY SSF160964 4 39 5.75E-6 T 12-10-2018 vfu_A02128 fa38eaa0594cdbf1edf96d3acef8ce2f 296 Pfam PF03547 Membrane transport protein 6 141 1.0E-6 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 vfu_A02128 fa38eaa0594cdbf1edf96d3acef8ce2f 296 Pfam PF03547 Membrane transport protein 146 284 4.4E-10 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 vfu_A03082 4e40d8ee7ca71f44d5c7053794a8010f 468 Gene3D G3DSA:1.20.1740.10 1 451 5.9E-63 T 12-10-2018 vfu_A03082 4e40d8ee7ca71f44d5c7053794a8010f 468 Pfam PF13520 Amino acid permease 5 438 1.5E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_A03082 4e40d8ee7ca71f44d5c7053794a8010f 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 4.3E-166 T 12-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 vfu_A03082 4e40d8ee7ca71f44d5c7053794a8010f 468 PIRSF PIRSF006060 1 464 2.3E-49 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B01251 99bbdae0eeba879d293121a23f35f299 177 SUPERFAMILY SSF55729 4 164 1.03E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B01251 99bbdae0eeba879d293121a23f35f299 177 Gene3D G3DSA:3.40.630.30 4 173 3.1E-52 T 12-10-2018 vfu_B01251 99bbdae0eeba879d293121a23f35f299 177 Pfam PF13302 Acetyltransferase (GNAT) domain 5 140 8.9E-19 T 12-10-2018 IPR000182 GNAT domain vfu_A01303 853cafa2ab23ad8c05056f6e9eb94aca 147 Pfam PF02620 Uncharacterized ACR, COG1399 35 146 3.0E-17 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD vfu_B00677 f8983c8b8eef5f80c9bc7dc01b0c3c56 387 Pfam PF06738 Putative threonine/serine exporter 97 230 2.1E-13 T 12-10-2018 IPR010619 Putative threonine/serine exporter vfu_B00677 f8983c8b8eef5f80c9bc7dc01b0c3c56 387 Pfam PF12821 Threonine/Serine exporter, ThrE 255 377 1.2E-8 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE vfu_A02247 a13aa7727126162762a7f68723e49220 139 Pfam PF05130 FlgN protein 19 134 8.6E-8 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 vfu_A02247 a13aa7727126162762a7f68723e49220 139 SUPERFAMILY SSF140566 18 133 8.37E-9 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 vfu_A02247 a13aa7727126162762a7f68723e49220 139 Gene3D G3DSA:1.20.58.300 7 134 8.5E-6 T 12-10-2018 vfu_A02198 d7068e61b08a30199671d050138734ee 103 Pfam PF13642 protein structure with unknown function 3 100 4.6E-35 T 12-10-2018 IPR025284 Protein of unknown function DUF4144 vfu_A02598 d44ada90bf163842e4ee21a209e88df7 163 Pfam PF02674 Colicin V production protein 4 142 3.3E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 vfu_A02943 8d4c8c27e7924451f3779189b41e991e 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 120 5.2E-36 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 vfu_A02943 8d4c8c27e7924451f3779189b41e991e 122 Gene3D G3DSA:3.40.1350.10 13 122 1.5E-31 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 vfu_A02943 8d4c8c27e7924451f3779189b41e991e 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 22.834 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 vfu_A02943 8d4c8c27e7924451f3779189b41e991e 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 3.4E-28 T 12-10-2018 IPR003509 Uncharacterised protein family UPF0102 vfu_A02943 8d4c8c27e7924451f3779189b41e991e 122 SUPERFAMILY SSF52980 7 112 2.9E-21 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A02911 f4a0a57e4bff3bf323a7a2add1917a9f 231 SUPERFAMILY SSF53167 1 230 9.43E-74 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 vfu_A02911 f4a0a57e4bff3bf323a7a2add1917a9f 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 3.4E-102 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02911 f4a0a57e4bff3bf323a7a2add1917a9f 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.973 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 vfu_A02911 f4a0a57e4bff3bf323a7a2add1917a9f 231 Gene3D G3DSA:3.40.50.1580 1 231 1.6E-69 T 12-10-2018 vfu_A02911 f4a0a57e4bff3bf323a7a2add1917a9f 231 Pfam PF01048 Phosphorylase superfamily 2 227 3.0E-49 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 2.2E-29 T 12-10-2018 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 SUPERFAMILY SSF118215 29 441 6.93E-91 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 2.7E-98 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 vfu_A02114 84d0cb1f64a39eff0a2177520dca365b 461 Gene3D G3DSA:1.10.3860.10 6 460 4.8E-98 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 vfu_B00956 26550ce5ea8b35a66bc2618b760bb2ab 243 Pfam PF08241 Methyltransferase domain 47 141 8.7E-22 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 vfu_B00956 26550ce5ea8b35a66bc2618b760bb2ab 243 SUPERFAMILY SSF53335 5 236 1.46E-43 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00956 26550ce5ea8b35a66bc2618b760bb2ab 243 Gene3D G3DSA:3.40.50.150 24 242 1.5E-67 T 12-10-2018 vfu_A01493 f2abafd7044a1e50972d236285e4ee0c 170 SUPERFAMILY SSF52540 4 162 6.65E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01493 f2abafd7044a1e50972d236285e4ee0c 170 Gene3D G3DSA:3.40.50.300 1 165 1.8E-30 T 12-10-2018 vfu_A01493 f2abafd7044a1e50972d236285e4ee0c 170 Pfam PF00005 ABC transporter 21 156 2.6E-16 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01324 78455361c8419bfe2609cee7fcf37d46 341 Pfam PF01758 Sodium Bile acid symporter family 47 242 1.2E-46 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 vfu_B01324 78455361c8419bfe2609cee7fcf37d46 341 PIRSF PIRSF005508 1 340 4.8E-125 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 vfu_B01324 78455361c8419bfe2609cee7fcf37d46 341 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 329 7.4E-127 T 12-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 vfu_B01324 78455361c8419bfe2609cee7fcf37d46 341 Gene3D G3DSA:1.20.1530.20 2 332 6.0E-29 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_B01188 5487e8a311422547a9b67d84d4480a81 466 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 8 463 7.2E-137 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 vfu_B01188 5487e8a311422547a9b67d84d4480a81 466 Pfam PF06812 ImpA, N-terminal, type VI secretion system 12 125 8.0E-27 T 12-10-2018 IPR010657 ImpA, N-terminal vfu_B01188 5487e8a311422547a9b67d84d4480a81 466 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 215 462 5.7E-86 T 12-10-2018 IPR017739 Type VI secretion system-associated, VCA0119 vfu_A01999 c82b40f04baa0247948ead52fa3dbc9b 202 SUPERFAMILY SSF56784 4 193 7.4E-30 T 12-10-2018 IPR036412 HAD-like superfamily vfu_A01999 c82b40f04baa0247948ead52fa3dbc9b 202 Gene3D G3DSA:1.10.150.240 16 87 8.0E-34 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 vfu_A01999 c82b40f04baa0247948ead52fa3dbc9b 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 182 8.4E-9 T 12-10-2018 vfu_A01999 c82b40f04baa0247948ead52fa3dbc9b 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 183 5.7E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 vfu_A01999 c82b40f04baa0247948ead52fa3dbc9b 202 Gene3D G3DSA:3.40.50.1000 3 190 8.0E-34 T 12-10-2018 IPR023214 HAD superfamily vfu_B01008 fcd6867c623b4d66bc6ac12545e25409 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 716 2.0E-193 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 vfu_B01008 fcd6867c623b4d66bc6ac12545e25409 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 2.4E-127 T 12-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 vfu_B01008 fcd6867c623b4d66bc6ac12545e25409 726 SUPERFAMILY SSF51445 161 717 2.87E-148 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_A00306 66f1e6b4a3528ff409c8289e92b3bbd1 146 SUPERFAMILY SSF49764 6 139 6.98E-23 T 12-10-2018 IPR008978 HSP20-like chaperone vfu_A00306 66f1e6b4a3528ff409c8289e92b3bbd1 146 Pfam PF00011 Hsp20/alpha crystallin family 44 138 1.4E-20 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain vfu_A00306 66f1e6b4a3528ff409c8289e92b3bbd1 146 Gene3D G3DSA:2.60.40.790 35 138 3.0E-22 T 12-10-2018 IPR008978 HSP20-like chaperone vfu_B00530 31828d1fe51c4da6b68600d22b61970c 657 SMART SM00283 395 656 1.5E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_B00530 31828d1fe51c4da6b68600d22b61970c 657 SUPERFAMILY SSF58104 360 655 2.22E-55 T 12-10-2018 vfu_B00530 31828d1fe51c4da6b68600d22b61970c 657 Gene3D G3DSA:1.10.287.950 326 656 4.4E-53 T 12-10-2018 vfu_B00530 31828d1fe51c4da6b68600d22b61970c 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 432 620 4.3E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01570 682583543265bfe99dab1bfc9ca5cda5 267 Gene3D G3DSA:3.40.50.150 19 213 1.7E-41 T 12-10-2018 vfu_A01570 682583543265bfe99dab1bfc9ca5cda5 267 SUPERFAMILY SSF53335 19 248 1.82E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01570 682583543265bfe99dab1bfc9ca5cda5 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 6.1E-66 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 vfu_A01570 682583543265bfe99dab1bfc9ca5cda5 267 Pfam PF08241 Methyltransferase domain 57 147 5.2E-27 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 vfu_A01570 682583543265bfe99dab1bfc9ca5cda5 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 32.299 T 12-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 vfu_A03076 854874777e4e08052df416d874f2d944 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 8.7E-36 T 12-10-2018 IPR024528 Threonine/Serine exporter, ThrE vfu_B01180 7aa8f608189f2a4297c21fde1d3e4a04 327 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 17 313 4.0E-102 T 12-10-2018 IPR010732 Type VI secretion, TssG-like vfu_B01180 7aa8f608189f2a4297c21fde1d3e4a04 327 Pfam PF06996 Type VI secretion, TssG 18 313 5.4E-92 T 12-10-2018 IPR010732 Type VI secretion, TssG-like vfu_B01322 e61036fda43aaec10716666911b7ab4a 634 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 118 569 7.0E-79 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B01322 e61036fda43aaec10716666911b7ab4a 634 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 17 620 8.2E-176 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ vfu_B00764 d56a7c4fa24b7410e216861991f0d8ea 192 SUPERFAMILY SSF51645 20 188 2.09E-20 T 12-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_B00764 d56a7c4fa24b7410e216861991f0d8ea 192 Gene3D G3DSA:2.170.170.11 17 134 1.5E-27 T 12-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 149 1.6E-58 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 32.359 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 16 33 4.9E-39 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 4.9E-39 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 4.9E-39 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 4.9E-39 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 Gene3D G3DSA:3.10.420.10 4 155 6.5E-59 T 12-10-2018 IPR035958 SecB-like superfamily vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 SUPERFAMILY SSF54611 4 144 3.49E-52 T 12-10-2018 IPR035958 SecB-like superfamily vfu_A00614 128e70f30c4a28c64b827aab29f77f23 155 Pfam PF02556 Preprotein translocase subunit SecB 8 147 1.1E-55 T 12-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 vfu_B00808 ecf69b307ca45e49627b4174cf3434c0 414 SUPERFAMILY SSF103473 15 400 2.75E-55 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00808 ecf69b307ca45e49627b4174cf3434c0 414 Gene3D G3DSA:1.20.1250.20 17 398 1.1E-45 T 12-10-2018 vfu_B00808 ecf69b307ca45e49627b4174cf3434c0 414 Pfam PF07690 Major Facilitator Superfamily 24 356 4.1E-37 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00808 ecf69b307ca45e49627b4174cf3434c0 414 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 91 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 vfu_A01152 370f10cbad0ce8aa0ca1649a54606948 143 Pfam PF09842 Predicted membrane protein (DUF2069) 15 117 1.3E-33 T 12-10-2018 IPR018643 Protein of unknown function DUF2069, membrane vfu_A02883 986368ad9da3b5d9a43a514410f6264e 421 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 197 418 1.2E-72 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 vfu_A02883 986368ad9da3b5d9a43a514410f6264e 421 Pfam PF07670 Nucleoside recognition 95 191 1.4E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 vfu_A02883 986368ad9da3b5d9a43a514410f6264e 421 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 418 5.4E-150 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 vfu_A02883 986368ad9da3b5d9a43a514410f6264e 421 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 4.1E-25 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 vfu_B00243 551d04a0bd434975e417d327b903a47b 104 Pfam PF06496 Protein of unknown function (DUF1097) 1 80 4.7E-18 T 12-10-2018 IPR009476 Protein of unknown function DUF1097 vfu_B00953 144878b6ae39c261569726a6ffca7b69 79 SUPERFAMILY SSF54928 2 78 3.76E-26 T 12-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 vfu_B00953 144878b6ae39c261569726a6ffca7b69 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 72 4.5E-22 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 vfu_B00953 144878b6ae39c261569726a6ffca7b69 79 Gene3D G3DSA:3.30.70.330 1 79 1.4E-26 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily vfu_B00953 144878b6ae39c261569726a6ffca7b69 79 SMART SM00360 2 75 2.4E-24 T 12-10-2018 IPR000504 RNA recognition motif domain GO:0003676 vfu_B00942 a1cff684f694d1eea8d15d001f0e6787 375 Gene3D G3DSA:3.30.9.10 59 320 8.8E-126 T 12-10-2018 vfu_B00942 a1cff684f694d1eea8d15d001f0e6787 375 Gene3D G3DSA:3.50.50.60 4 370 8.8E-126 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00942 a1cff684f694d1eea8d15d001f0e6787 375 SUPERFAMILY SSF51905 2 373 1.1E-47 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00942 a1cff684f694d1eea8d15d001f0e6787 375 Pfam PF01266 FAD dependent oxidoreductase 4 355 1.2E-50 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_B00942 a1cff684f694d1eea8d15d001f0e6787 375 SUPERFAMILY SSF54373 217 315 1.26E-15 T 12-10-2018 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 PIRSF PIRSF000726 59 385 1.3E-73 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 PIRSF PIRSF000726 3 62 2.0E-22 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 379 9.8E-78 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 Gene3D G3DSA:3.40.1160.10 4 258 4.8E-87 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 Pfam PF00696 Amino acid kinase family 5 231 3.9E-53 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 SUPERFAMILY SSF55021 311 381 7.1E-5 T 12-10-2018 vfu_A02976 9c6f458edf77cbb21c3690adbed05f81 395 SUPERFAMILY SSF53633 6 242 1.44E-75 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A00222 6d868532e2ac9b1e9b34b08c3d03a0dd 218 Pfam PF01810 LysE type translocator 16 210 1.8E-38 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A00222 6d868532e2ac9b1e9b34b08c3d03a0dd 218 PIRSF PIRSF006324 1 213 1.3E-48 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A01004 fb3035ab796e2a614ea2dd38240c92c5 109 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 1.1E-30 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 vfu_A01004 fb3035ab796e2a614ea2dd38240c92c5 109 SUPERFAMILY SSF69754 1 103 1.44E-29 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like vfu_A01004 fb3035ab796e2a614ea2dd38240c92c5 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 92 1.5E-22 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 vfu_A01004 fb3035ab796e2a614ea2dd38240c92c5 109 Gene3D G3DSA:3.30.160.100 1 107 7.3E-33 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like vfu_A03013 c64f6a1481a5cb481da6ec3345b901d1 290 Pfam PF13280 WYL domain 120 285 5.2E-18 T 12-10-2018 IPR026881 WYL domain vfu_A01092 72b5b928557bbcae0081e7cc686b08ef 244 Pfam PF08241 Methyltransferase domain 74 125 3.6E-10 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 vfu_A01092 72b5b928557bbcae0081e7cc686b08ef 244 SUPERFAMILY SSF53335 73 212 2.67E-20 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A01092 72b5b928557bbcae0081e7cc686b08ef 244 Gene3D G3DSA:3.40.50.150 57 183 1.8E-14 T 12-10-2018 vfu_A01466 7e5b81bf2dcb424806d85533fba99746 396 Gene3D G3DSA:1.20.1250.20 13 392 4.5E-42 T 12-10-2018 vfu_A01466 7e5b81bf2dcb424806d85533fba99746 396 SUPERFAMILY SSF103473 9 391 4.45E-54 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01466 7e5b81bf2dcb424806d85533fba99746 396 Pfam PF07690 Major Facilitator Superfamily 25 323 5.5E-31 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01761 16acdbfb48635b03b4a18419744aba6e 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 6.2E-137 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_A01761 16acdbfb48635b03b4a18419744aba6e 525 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 12-10-2018 IPR018093 BCCT transporter, conserved site vfu_A01761 16acdbfb48635b03b4a18419744aba6e 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.8E-173 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_A01504 753bc4378b327548928a0ebb5d0c219d 423 SMART SM00388 224 293 1.0E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01504 753bc4378b327548928a0ebb5d0c219d 423 Gene3D G3DSA:3.30.565.10 289 422 7.8E-8 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01504 753bc4378b327548928a0ebb5d0c219d 423 SUPERFAMILY SSF55874 294 406 7.23E-11 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily vfu_A01504 753bc4378b327548928a0ebb5d0c219d 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 289 9.8E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 vfu_A01504 753bc4378b327548928a0ebb5d0c219d 423 SUPERFAMILY SSF47384 207 290 3.73E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 vfu_A01504 753bc4378b327548928a0ebb5d0c219d 423 Gene3D G3DSA:1.10.287.130 170 288 4.9E-17 T 12-10-2018 vfu_A01987 f79dbb0ddd3059eaa9ea5d74d395baea 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 9.5E-54 T 12-10-2018 IPR021212 Domain of unknown function DUF2760 vfu_A02369 b6d2a96c989578aac04d42de0f5c9322 269 Gene3D G3DSA:3.40.50.300 16 268 4.0E-76 T 12-10-2018 vfu_A02369 b6d2a96c989578aac04d42de0f5c9322 269 SUPERFAMILY SSF52540 20 264 4.56E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02369 b6d2a96c989578aac04d42de0f5c9322 269 SMART SM00382 44 242 6.0E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02369 b6d2a96c989578aac04d42de0f5c9322 269 PIRSF PIRSF039085 16 269 7.0E-118 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 vfu_A02369 b6d2a96c989578aac04d42de0f5c9322 269 Pfam PF00005 ABC transporter 35 194 7.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02369 b6d2a96c989578aac04d42de0f5c9322 269 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00589 cc2f04a4ded37b98a25365255ac0ac33 450 Pfam PF02447 GntP family permease 1 448 2.4E-99 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_B00589 cc2f04a4ded37b98a25365255ac0ac33 450 PIRSF PIRSF002746 1 450 4.5E-117 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 vfu_A01578 643191a51bde729f2e052ed42aa92aba 265 Pfam PF07103 Protein of unknown function (DUF1365) 13 249 3.3E-68 T 12-10-2018 IPR010775 Protein of unknown function DUF1365 vfu_A00500 0e47850c50b00a3dcf6a76a6318d80b7 179 SUPERFAMILY SSF52540 4 169 9.25E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00500 0e47850c50b00a3dcf6a76a6318d80b7 179 Pfam PF13521 AAA domain 4 164 3.0E-39 T 12-10-2018 IPR038727 NadR/Ttd14, AAA domain vfu_A00500 0e47850c50b00a3dcf6a76a6318d80b7 179 Gene3D G3DSA:3.40.50.300 1 168 1.2E-8 T 12-10-2018 vfu_B01218 04baec1ce4fd2c63d168692bc43d924b 589 Gene3D G3DSA:1.20.1730.10 21 504 1.5E-79 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_B01218 04baec1ce4fd2c63d168692bc43d924b 589 Pfam PF00474 Sodium:solute symporter family 33 422 5.9E-35 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A00735 e25c859a1605397ff4d26d002360beec 163 Gene3D G3DSA:2.60.450.10 20 157 8.4E-40 T 12-10-2018 vfu_A00735 e25c859a1605397ff4d26d002360beec 163 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.245 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 vfu_A00735 e25c859a1605397ff4d26d002360beec 163 Pfam PF03968 OstA-like protein 30 141 1.1E-29 T 12-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal vfu_A00735 e25c859a1605397ff4d26d002360beec 163 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 1.3E-46 T 12-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 vfu_A01554 d5d87ea75d1e1c827430a15de4735f7c 421 Pfam PF03553 Na+/H+ antiporter family 18 189 8.4E-15 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 vfu_A02706 465a0aa9d00c99906b1de3753307c562 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 3 147 1.8E-46 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain vfu_A02706 465a0aa9d00c99906b1de3753307c562 231 Gene3D G3DSA:2.40.30.70 1 139 5.8E-40 T 12-10-2018 IPR036414 YaeB, N-terminal domain superfamily vfu_A02706 465a0aa9d00c99906b1de3753307c562 231 Gene3D G3DSA:3.30.2310.10 140 227 1.0E-18 T 12-10-2018 vfu_A02706 465a0aa9d00c99906b1de3753307c562 231 SUPERFAMILY SSF118196 2 226 1.12E-75 T 12-10-2018 IPR036413 YaeB-like superfamily vfu_A02706 465a0aa9d00c99906b1de3753307c562 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.2E-37 T 12-10-2018 IPR023370 YaeB-like, N-terminal domain vfu_B00183 e8e63e6ef80dba7d1fced018c789c46d 347 Gene3D G3DSA:1.10.760.10 211 347 3.4E-5 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B00183 e8e63e6ef80dba7d1fced018c789c46d 347 SUPERFAMILY SSF46626 251 339 1.96E-6 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 vfu_B00183 e8e63e6ef80dba7d1fced018c789c46d 347 Pfam PF06181 Urate oxidase N-terminal 2 234 3.9E-95 T 12-10-2018 IPR010389 Urate oxidase N-terminal vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 PIRSF PIRSF000077 2 107 1.1E-27 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 SUPERFAMILY SSF52833 2 104 1.35E-28 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 Gene3D G3DSA:3.40.30.10 1 105 1.8E-25 T 12-10-2018 vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 Pfam PF00085 Thioredoxin 5 104 2.7E-22 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 PRINTS PR00421 Thioredoxin family signature 23 31 5.2E-6 T 12-10-2018 vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 PRINTS PR00421 Thioredoxin family signature 31 40 5.2E-6 T 12-10-2018 vfu_B00906 192f7a8d058493364b82c1aaabfc3247 108 PRINTS PR00421 Thioredoxin family signature 72 83 5.2E-6 T 12-10-2018 vfu_A01673 ba51c3d39737feb88c0893f97b795808 310 Gene3D G3DSA:3.40.50.150 88 290 2.7E-44 T 12-10-2018 vfu_A01673 ba51c3d39737feb88c0893f97b795808 310 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 8.1E-160 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 vfu_A01673 ba51c3d39737feb88c0893f97b795808 310 SUPERFAMILY SSF53335 7 288 1.84E-52 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_A00599 e509d9091ac7482cb5c24672c7510794 116 Pfam PF11333 Protein of unknown function (DUF3135) 13 92 6.1E-32 T 12-10-2018 IPR021482 Protein of unknown function DUF3135 vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 SMART SM00382 46 239 1.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 Pfam PF00005 ABC transporter 38 189 4.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 SUPERFAMILY SSF52540 9 261 1.33E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 Gene3D G3DSA:3.40.50.300 6 330 5.2E-98 T 12-10-2018 vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 2.4E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A01537 c3bf7af434bf0dbcdaeb1135ac18f44b 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.9E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 vfu_A02754 93e015b25ae8dbf46d9bd0c26b1739dc 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 vfu_A02754 93e015b25ae8dbf46d9bd0c26b1739dc 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 2.2E-35 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 vfu_A01029 fde7e7e550a1712ac547c71058760480 414 PIRSF PIRSF016055 1 414 3.3E-200 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 vfu_A01029 fde7e7e550a1712ac547c71058760480 414 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 1.3E-107 T 12-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 vfu_A01029 fde7e7e550a1712ac547c71058760480 414 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.2E-201 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 vfu_A01029 fde7e7e550a1712ac547c71058760480 414 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.423 T 12-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 vfu_B00379 17528b64842b60787edb0b2404899c0c 312 Gene3D G3DSA:2.30.300.10 13 299 1.2E-36 T 12-10-2018 vfu_B00379 17528b64842b60787edb0b2404899c0c 312 SUPERFAMILY SSF69279 4 160 1.81E-27 T 12-10-2018 vfu_B00379 17528b64842b60787edb0b2404899c0c 312 Gene3D G3DSA:3.30.1920.10 186 245 1.2E-36 T 12-10-2018 IPR023399 Baseplate-like, two-layer sandwich fold vfu_B00379 17528b64842b60787edb0b2404899c0c 312 Gene3D G3DSA:3.55.50.10 81 161 1.2E-36 T 12-10-2018 vfu_B00379 17528b64842b60787edb0b2404899c0c 312 SUPERFAMILY SSF69279 170 305 3.46E-25 T 12-10-2018 vfu_A01608 03fb651aba90d99469234fe590e43052 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 1.9E-19 T 12-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 vfu_A01608 03fb651aba90d99469234fe590e43052 233 SUPERFAMILY SSF55729 79 232 1.03E-24 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A01608 03fb651aba90d99469234fe590e43052 233 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 232 37.695 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 vfu_A01608 03fb651aba90d99469234fe590e43052 233 PIRSF PIRSF037208 1 233 3.3E-84 T 12-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 vfu_A01608 03fb651aba90d99469234fe590e43052 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 226 1.3E-33 T 12-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 vfu_A02683 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Gene3D G3DSA:3.40.50.450 121 246 3.8E-35 T 12-10-2018 vfu_A02683 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Gene3D G3DSA:3.30.1850.10 1 120 3.4E-57 T 12-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 vfu_A02683 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 3.8E-50 T 12-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 vfu_A02683 b9d0f29d7ee503b37fbdebadd73bfa0c 283 Pfam PF03641 Possible lysine decarboxylase 187 241 5.7E-6 T 12-10-2018 IPR031100 LOG family vfu_A02683 b9d0f29d7ee503b37fbdebadd73bfa0c 283 SUPERFAMILY SSF102405 119 240 2.75E-20 T 12-10-2018 vfu_B01529 3a92c64b1cb517053612dabb08d1378c 268 Pfam PF04471 Restriction endonuclease 6 111 5.9E-11 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 vfu_B01529 3a92c64b1cb517053612dabb08d1378c 268 SUPERFAMILY SSF52980 13 111 3.32E-9 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 SUPERFAMILY SSF51735 3 243 3.01E-53 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 8.3E-43 T 12-10-2018 vfu_A00108 b15848360fe80e1b6e8e7328dfdb45fb 247 Gene3D G3DSA:3.40.50.720 2 245 7.3E-53 T 12-10-2018 vfu_A00130 9a281001ff5be51504c587dddc60771b 225 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 22 218 4.0E-61 T 12-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB vfu_A00130 9a281001ff5be51504c587dddc60771b 225 Gene3D G3DSA:2.40.360.10 26 224 2.7E-63 T 12-10-2018 IPR023373 YmcC-like superfamily vfu_A00130 9a281001ff5be51504c587dddc60771b 225 SUPERFAMILY SSF159270 27 222 1.27E-57 T 12-10-2018 IPR023373 YmcC-like superfamily vfu_A02500 736c60a219906a8285a4a2bc60882684 789 Pfam PF12571 Phage tail-collar fibre protein 7 160 1.2E-29 T 12-10-2018 IPR022225 Phage tail fibre protein vfu_B00207 beec8b71184dfcd5785ebd998437ae06 390 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 306 1.6E-81 T 12-10-2018 IPR032811 Putative conjugal transfer protein TraF-related vfu_A02202 8626573c8f4695312e0200f907610a42 573 SMART SM00382 365 549 3.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A02202 8626573c8f4695312e0200f907610a42 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A02202 8626573c8f4695312e0200f907610a42 573 SUPERFAMILY SSF52540 334 571 2.09E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02202 8626573c8f4695312e0200f907610a42 573 SUPERFAMILY SSF90123 7 322 2.09E-37 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A02202 8626573c8f4695312e0200f907610a42 573 Gene3D G3DSA:3.40.50.300 327 572 2.6E-77 T 12-10-2018 vfu_A02202 8626573c8f4695312e0200f907610a42 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.7E-139 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 vfu_A02202 8626573c8f4695312e0200f907610a42 573 Gene3D G3DSA:1.20.1560.10 1 321 1.2E-23 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_A02202 8626573c8f4695312e0200f907610a42 573 Pfam PF00005 ABC transporter 356 502 4.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B01049 5b9e8f7971ffb67d9e1cb408ee148e63 306 Pfam PF04018 Domain of unknown function (DUF368) 13 257 1.1E-97 T 12-10-2018 IPR007163 Protein of unknown function DUF368 vfu_B01487 051a94c27fd74cd64ebe5e0fc7681500 442 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 433 8.1E-87 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B01487 051a94c27fd74cd64ebe5e0fc7681500 442 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 427 1.4E-73 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B01487 051a94c27fd74cd64ebe5e0fc7681500 442 PIRSF PIRSF006066 4 438 2.4E-66 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B01312 bd66f0fef684076ac1fd24b15e53e6b6 307 Pfam PF00892 EamA-like transporter family 159 285 1.9E-7 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01312 bd66f0fef684076ac1fd24b15e53e6b6 307 SUPERFAMILY SSF103481 199 290 4.18E-5 T 12-10-2018 vfu_A01717 01dd2ed272c9813cb2ad508301dc4a03 212 Pfam PF00005 ABC transporter 10 156 8.4E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A01717 01dd2ed272c9813cb2ad508301dc4a03 212 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_A01717 01dd2ed272c9813cb2ad508301dc4a03 212 Gene3D G3DSA:3.40.50.300 2 212 5.4E-56 T 12-10-2018 vfu_A01717 01dd2ed272c9813cb2ad508301dc4a03 212 SUPERFAMILY SSF52540 4 207 2.21E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01717 01dd2ed272c9813cb2ad508301dc4a03 212 SMART SM00382 19 207 2.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01271 c402fa08d0f97aa319b5b936567d9c13 239 PRINTS PR01805 VacJ lipoprotein signature 130 147 2.6E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 vfu_A01271 c402fa08d0f97aa319b5b936567d9c13 239 PRINTS PR01805 VacJ lipoprotein signature 93 110 2.6E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 vfu_A01271 c402fa08d0f97aa319b5b936567d9c13 239 PRINTS PR01805 VacJ lipoprotein signature 24 37 2.6E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 vfu_A01271 c402fa08d0f97aa319b5b936567d9c13 239 PRINTS PR01805 VacJ lipoprotein signature 42 58 2.6E-29 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 vfu_A01271 c402fa08d0f97aa319b5b936567d9c13 239 Pfam PF04333 MlaA lipoprotein 22 214 5.7E-64 T 12-10-2018 IPR007428 MlaA lipoprotein GO:0016020 vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 Gene3D G3DSA:1.10.1270.20 166 247 4.3E-34 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 Gene3D G3DSA:3.40.1280.10 1 165 1.5E-66 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 SUPERFAMILY SSF75217 1 245 1.9E-101 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 4.7E-69 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.7E-107 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 PIRSF PIRSF000386 1 247 3.9E-100 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 vfu_A02958 252e50889e29973ba9800e8e195a45c0 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 116.723 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 vfu_B01226 e35a00e90a9db76a6e42fbe1c0536ddd 242 SUPERFAMILY SSF56935 84 178 2.06E-7 T 12-10-2018 vfu_B01226 e35a00e90a9db76a6e42fbe1c0536ddd 242 Gene3D G3DSA:2.40.160.40 22 242 1.9E-48 T 12-10-2018 vfu_B01226 e35a00e90a9db76a6e42fbe1c0536ddd 242 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 242 2.4E-32 T 12-10-2018 IPR009331 Oligogalacturonate-specific porin vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 Gene3D G3DSA:1.20.200.10 118 447 6.0E-158 T 12-10-2018 vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 7.4E-52 T 12-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 3.3E-148 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 8.6E-19 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 8.6E-19 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 8.6E-19 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 8.6E-19 T 12-10-2018 IPR000362 Fumarate lyase family vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 Gene3D G3DSA:1.10.275.10 1 117 5.4E-50 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 SUPERFAMILY SSF48557 4 449 1.57E-109 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 Pfam PF00206 Lyase 14 313 4.8E-73 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal vfu_A01583 0cab3851ab14da2aa10dc08174fc670b 456 Gene3D G3DSA:1.10.40.30 383 446 6.0E-158 T 12-10-2018 vfu_B00737 acb78d11885a7e395a8d858939620856 238 Pfam PF00117 Glutamine amidotransferase class-I 44 185 7.1E-11 T 12-10-2018 IPR017926 Glutamine amidotransferase vfu_B00737 acb78d11885a7e395a8d858939620856 238 Gene3D G3DSA:3.40.50.880 1 234 5.4E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_B00737 acb78d11885a7e395a8d858939620856 238 SUPERFAMILY SSF52317 1 200 1.06E-31 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like vfu_A02166 a2021ac7ba087d92f7152d6f9617bf43 131 Gene3D G3DSA:3.40.50.300 18 124 1.6E-10 T 12-10-2018 vfu_A02599 43496a3c509f22d424024e602ead455c 185 Pfam PF05036 Sporulation related domain 109 175 1.5E-11 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 vfu_A02599 43496a3c509f22d424024e602ead455c 185 Gene3D G3DSA:3.30.70.1070 103 177 2.7E-9 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_A02599 43496a3c509f22d424024e602ead455c 185 SUPERFAMILY SSF110997 108 181 7.85E-15 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 vfu_B00770 ee9e68dcc93cc613d9964e3aa4baf3bc 305 Pfam PF00892 EamA-like transporter family 7 137 5.4E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00770 ee9e68dcc93cc613d9964e3aa4baf3bc 305 SUPERFAMILY SSF103481 41 137 3.66E-13 T 12-10-2018 vfu_B00770 ee9e68dcc93cc613d9964e3aa4baf3bc 305 SUPERFAMILY SSF103481 182 285 1.07E-5 T 12-10-2018 vfu_A02225 c11ae2877672bd8b862bf99b2770226d 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.578 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 vfu_A02225 c11ae2877672bd8b862bf99b2770226d 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 177 4.1E-63 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 vfu_A02225 c11ae2877672bd8b862bf99b2770226d 181 Pfam PF04279 Intracellular septation protein A 1 174 8.5E-68 T 12-10-2018 IPR006008 Intracellular septation protein A GO:0016021 vfu_A00324 f295d4cee03c21f38e47d62f593af3fb 213 PIRSF PIRSF010130 1 213 3.4E-84 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 vfu_A00324 f295d4cee03c21f38e47d62f593af3fb 213 Pfam PF06130 Phosphate propanoyltransferase 138 203 4.9E-19 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 vfu_A00324 f295d4cee03c21f38e47d62f593af3fb 213 Pfam PF06130 Phosphate propanoyltransferase 29 108 2.8E-28 T 12-10-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013 vfu_A02138 5b3c52e595311555918b4656bd31395d 160 Pfam PF00583 Acetyltransferase (GNAT) family 37 137 1.3E-14 T 12-10-2018 IPR000182 GNAT domain vfu_A02138 5b3c52e595311555918b4656bd31395d 160 Gene3D G3DSA:3.40.630.30 13 149 3.2E-27 T 12-10-2018 vfu_A02138 5b3c52e595311555918b4656bd31395d 160 SUPERFAMILY SSF55729 1 158 9.43E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00086 e84e4476e66b17c655adb922174e5388 204 Pfam PF01810 LysE type translocator 14 189 1.4E-23 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A03055 47ae3f7e582065df46b363dbc66df819 143 Pfam PF14467 Domain of unknown function (DUF4426) 25 142 9.7E-49 T 12-10-2018 IPR025218 Domain of unknown function DUF4426 vfu_A03055 47ae3f7e582065df46b363dbc66df819 143 Gene3D G3DSA:2.60.40.3340 14 143 9.6E-40 T 12-10-2018 vfu_A00075 eaf820d90e4bf6501757da9ca6b1d081 260 Gene3D G3DSA:3.40.930.10 121 252 2.3E-19 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_A00075 eaf820d90e4bf6501757da9ca6b1d081 260 SUPERFAMILY SSF55804 124 250 1.31E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 vfu_A00075 eaf820d90e4bf6501757da9ca6b1d081 260 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 124 250 2.8E-19 T 12-10-2018 IPR002178 PTS EIIA type-2 domain vfu_A00075 eaf820d90e4bf6501757da9ca6b1d081 260 PIRSF PIRSF029195 1 258 4.5E-40 T 12-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 vfu_A00075 eaf820d90e4bf6501757da9ca6b1d081 260 SUPERFAMILY SSF55594 8 87 5.5E-6 T 12-10-2018 IPR035895 HPr-like superfamily vfu_B00092 25d89649a6d7e2f4567bd85ee1fee1a8 103 Pfam PF04982 HPP family 1 97 2.2E-31 T 12-10-2018 IPR007065 HPP vfu_B00811 a8543e86ad91f5bddbe62dcda371d36f 164 SUPERFAMILY SSF48452 5 128 3.45E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01953 9030c0584339d6d3feb4087d5ee2f3f3 212 PIRSF PIRSF006324 1 210 6.1E-53 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A01953 9030c0584339d6d3feb4087d5ee2f3f3 212 Pfam PF01810 LysE type translocator 15 208 3.3E-31 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A02914 b5c7897161fbd31a07de9ea6e4b306dd 206 Pfam PF03458 UPF0126 domain 8 81 2.7E-22 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 vfu_A02914 b5c7897161fbd31a07de9ea6e4b306dd 206 Pfam PF03458 UPF0126 domain 95 165 1.2E-18 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 vfu_A00325 040f221780d02365c887cf3b5b2ac731 195 SUPERFAMILY SSF143414 4 88 5.49E-19 T 12-10-2018 IPR037233 CcmK-like superfamily vfu_A00325 040f221780d02365c887cf3b5b2ac731 195 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 49 5.0E-4 T 12-10-2018 vfu_A00325 040f221780d02365c887cf3b5b2ac731 195 SMART SM00877 3 79 2.1E-19 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00325 040f221780d02365c887cf3b5b2ac731 195 Pfam PF00936 BMC domain 4 66 6.2E-18 T 12-10-2018 IPR000249 Microcompartment protein, bacteria vfu_A00325 040f221780d02365c887cf3b5b2ac731 195 Gene3D G3DSA:3.30.70.1710 2 98 3.9E-24 T 12-10-2018 vfu_B01115 437c1936dc3322e7ae56da443f41a10a 961 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 387 649 1.1E-11 T 12-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 vfu_B01115 437c1936dc3322e7ae56da443f41a10a 961 Gene3D G3DSA:3.40.720.10 378 653 1.4E-13 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 vfu_B01115 437c1936dc3322e7ae56da443f41a10a 961 SUPERFAMILY SSF53649 382 652 4.71E-9 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 vfu_A00190 591801c099c8b7550e6bc7ac00def52f 650 Gene3D G3DSA:1.10.287.950 318 650 3.0E-68 T 12-10-2018 vfu_A00190 591801c099c8b7550e6bc7ac00def52f 650 SMART SM00304 318 372 5.4E-5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 vfu_A00190 591801c099c8b7550e6bc7ac00def52f 650 SUPERFAMILY SSF58104 348 649 2.88E-69 T 12-10-2018 vfu_A00190 591801c099c8b7550e6bc7ac00def52f 650 SMART SM01358 37 289 2.8E-23 T 12-10-2018 IPR032255 Helical bimodular sensor domain vfu_A00190 591801c099c8b7550e6bc7ac00def52f 650 SMART SM00283 387 648 9.4E-61 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00190 591801c099c8b7550e6bc7ac00def52f 650 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 613 3.3E-39 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 Gene3D G3DSA:1.10.1660.10 1 130 1.5E-35 T 12-10-2018 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 Pfam PF13411 MerR HTH family regulatory protein 3 69 5.7E-17 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 SUPERFAMILY SSF46955 2 121 3.3E-33 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 2.3E-64 T 12-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 SMART SM00422 2 71 2.2E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.2E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.2E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A00080 cee491be9dc0fdeb2222e8eec91ac3db 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.2E-11 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 vfu_A02804 863093d806b8d80dd1bb9091d33809b3 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 229 1.2E-116 T 12-10-2018 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 KEGG: 00190+2.7.4.1 vfu_A02804 863093d806b8d80dd1bb9091d33809b3 258 Gene3D G3DSA:3.40.50.300 1 238 2.6E-100 T 12-10-2018 vfu_A02804 863093d806b8d80dd1bb9091d33809b3 258 PIRSF PIRSF028756 1 258 6.1E-134 T 12-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 vfu_A02804 863093d806b8d80dd1bb9091d33809b3 258 SUPERFAMILY SSF52540 35 223 3.97E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02804 863093d806b8d80dd1bb9091d33809b3 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 229 1.8E-114 T 12-10-2018 IPR022488 Polyphosphate kinase-2-related vfu_A03018 1c824d2146dc4ff5f5bb6ae3680c4025 81 Gene3D G3DSA:2.40.160.20 1 79 1.1E-21 T 12-10-2018 vfu_A03018 1c824d2146dc4ff5f5bb6ae3680c4025 81 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 5 77 1.6E-17 T 12-10-2018 IPR018550 Lipid A 3-O-deacylase-related vfu_A01457 49c4efd4441df82de6f0c9db95277336 302 SUPERFAMILY SSF103481 202 301 2.62E-15 T 12-10-2018 vfu_A01457 49c4efd4441df82de6f0c9db95277336 302 Pfam PF00892 EamA-like transporter family 20 152 2.2E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A01457 49c4efd4441df82de6f0c9db95277336 302 Pfam PF00892 EamA-like transporter family 168 301 5.6E-29 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_A01457 49c4efd4441df82de6f0c9db95277336 302 SUPERFAMILY SSF103481 53 155 2.22E-14 T 12-10-2018 vfu_A02347 9d58847654e676642301487f6edff2ac 82 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 1 78 4.9E-31 T 12-10-2018 IPR011846 Cyd operon protein YbgE vfu_A02347 9d58847654e676642301487f6edff2ac 82 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 1 78 3.7E-32 T 12-10-2018 IPR011846 Cyd operon protein YbgE vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.5E-43 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 Pfam PF07687 Peptidase dimerisation domain 177 284 1.3E-23 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 SUPERFAMILY SSF55031 181 290 4.49E-29 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 Gene3D G3DSA:3.40.630.10 9 364 8.5E-128 T 12-10-2018 vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 SUPERFAMILY SSF53187 6 375 1.59E-64 T 12-10-2018 vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 Gene3D G3DSA:3.30.70.360 181 294 8.5E-128 T 12-10-2018 vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.8E-182 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 vfu_A01165 305860c337c795ed5233db1a7f8d62e6 378 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.348 T 12-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 vfu_B01473 db34974da1cc7c9c7ac25306d5d11843 487 Gene3D G3DSA:3.40.50.720 3 264 7.2E-50 T 12-10-2018 vfu_B01473 db34974da1cc7c9c7ac25306d5d11843 487 SUPERFAMILY SSF48179 278 486 1.12E-48 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 vfu_B01473 db34974da1cc7c9c7ac25306d5d11843 487 SUPERFAMILY SSF51735 2 258 5.12E-66 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B01473 db34974da1cc7c9c7ac25306d5d11843 487 Gene3D G3DSA:1.10.1040.10 277 487 9.1E-59 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 vfu_B01473 db34974da1cc7c9c7ac25306d5d11843 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 205 463 1.1E-64 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 vfu_B01473 db34974da1cc7c9c7ac25306d5d11843 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 18 173 2.8E-30 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 vfu_B00791 10e1f899891d0ca3d2db8cf7bd6ae3f6 474 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 48 461 2.7E-120 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath vfu_A00102 882c78b9e6136a80fce8acb3ec519e9d 425 Pfam PF03023 MviN-like protein 19 417 3.5E-17 T 12-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ vfu_A00501 af60891b4c54214c9a96929476ebe434 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 4.0E-88 T 12-10-2018 IPR021342 Protein of unknown function DUF2959 vfu_A00135 e11e66268dda6e567e4cef2892c2401f 304 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 1 295 47.545 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 vfu_A00135 e11e66268dda6e567e4cef2892c2401f 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 2 290 7.7E-80 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 vfu_A00135 e11e66268dda6e567e4cef2892c2401f 304 PIRSF PIRSF026649 1 299 4.5E-88 T 12-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 vfu_A00135 e11e66268dda6e567e4cef2892c2401f 304 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2 299 2.5E-110 T 12-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 vfu_A02255 a9405b98087dabd967c3eca8716467ba 456 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 409 454 2.2E-6 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A02255 a9405b98087dabd967c3eca8716467ba 456 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 2 454 3.0E-90 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 vfu_A02255 a9405b98087dabd967c3eca8716467ba 456 SUPERFAMILY SSF64518 131 456 3.53E-21 T 12-10-2018 vfu_A01122 1af2f048d30e0c75e02ff062becdeb4d 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.1E-51 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 vfu_A01122 1af2f048d30e0c75e02ff062becdeb4d 138 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 vfu_A01122 1af2f048d30e0c75e02ff062becdeb4d 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site vfu_A01122 1af2f048d30e0c75e02ff062becdeb4d 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.2E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain vfu_A00497 62b67e4be00e658eb3d8c0762b666556 176 Pfam PF13511 Domain of unknown function (DUF4124) 11 66 9.4E-11 T 12-10-2018 IPR025392 Domain of unknown function DUF4124 vfu_B01179 b2bf549a6d504b356c824698190aef0d 589 PIRSF PIRSF028304 1 589 1.1E-189 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like vfu_B01179 b2bf549a6d504b356c824698190aef0d 589 Pfam PF05947 Type VI secretion system, TssF 5 588 4.0E-199 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like vfu_B01179 b2bf549a6d504b356c824698190aef0d 589 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 589 4.3E-207 T 12-10-2018 IPR010272 Type VI secretion system, TssF-like vfu_A00302 7c6aed2191e00e9df5393aa4295a2266 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 177 6.3E-20 T 12-10-2018 IPR001727 Gdt1 family vfu_A00302 7c6aed2191e00e9df5393aa4295a2266 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.0E-20 T 12-10-2018 IPR001727 Gdt1 family vfu_A02348 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 12-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 vfu_A02348 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 12-10-2018 IPR012994 Membrane bound YbgT-like vfu_B00792 be993783bd0979bc39b648d53c3b7aca 492 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 64 491 7.7E-165 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath vfu_B00792 be993783bd0979bc39b648d53c3b7aca 492 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 491 3.1E-173 T 12-10-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath vfu_B00726 8734a7f55171c353a390a0c15cb4ca23 707 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 25 695 8.0E-218 T 12-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ vfu_B00726 8734a7f55171c353a390a0c15cb4ca23 707 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 123 616 1.9E-75 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B00710 e4caa1c5f02fc8dbb19fb5a153317ed4 337 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 1.6E-111 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_B00710 e4caa1c5f02fc8dbb19fb5a153317ed4 337 Gene3D G3DSA:3.40.630.30 1 270 5.4E-97 T 12-10-2018 vfu_B00710 e4caa1c5f02fc8dbb19fb5a153317ed4 337 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.8E-102 T 12-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 vfu_B00710 e4caa1c5f02fc8dbb19fb5a153317ed4 337 SUPERFAMILY SSF55729 1 337 1.42E-97 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00532 ef004fc5c332e3f3a7c70e0ebb5ca04b 390 Gene3D G3DSA:2.115.10.20 1 390 1.3E-137 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_B00532 ef004fc5c332e3f3a7c70e0ebb5ca04b 390 SUPERFAMILY SSF75005 47 372 1.13E-83 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily vfu_B00532 ef004fc5c332e3f3a7c70e0ebb5ca04b 390 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 70 362 2.9E-25 T 12-10-2018 IPR007184 Mannoside phosphorylase vfu_B00532 ef004fc5c332e3f3a7c70e0ebb5ca04b 390 Hamap MF_00928 4-O-beta-D-mannosyl-D-glucose phosphorylase. 3 389 70.078 T 12-10-2018 IPR028583 4-O-beta-D-mannosyl-D-glucose phosphorylase MetaCyc: PWY-7456 vfu_B00532 ef004fc5c332e3f3a7c70e0ebb5ca04b 390 PIRSF PIRSF016202 19 367 1.3E-93 T 12-10-2018 IPR007184 Mannoside phosphorylase vfu_A01204 13ed9223e713a5268014712b5b90ac9b 184 SMART SM00463 102 180 1.9E-17 T 12-10-2018 IPR002625 Smr domain vfu_A01204 13ed9223e713a5268014712b5b90ac9b 184 Pfam PF01713 Smr domain 105 179 9.0E-19 T 12-10-2018 IPR002625 Smr domain vfu_A01204 13ed9223e713a5268014712b5b90ac9b 184 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 181 37.901 T 12-10-2018 IPR022990 Uncharacterised protein family UPF0115 vfu_A01204 13ed9223e713a5268014712b5b90ac9b 184 SUPERFAMILY SSF160443 103 179 3.53E-12 T 12-10-2018 IPR036063 Smr domain superfamily vfu_A01204 13ed9223e713a5268014712b5b90ac9b 184 Gene3D G3DSA:3.30.1370.110 57 184 3.6E-29 T 12-10-2018 vfu_A00952 5ec2f4c131b5ac72e0cca71a019fe13a 168 SUPERFAMILY SSF55729 1 159 9.01E-27 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_A00952 5ec2f4c131b5ac72e0cca71a019fe13a 168 Pfam PF00583 Acetyltransferase (GNAT) family 35 122 5.7E-9 T 12-10-2018 IPR000182 GNAT domain vfu_A00952 5ec2f4c131b5ac72e0cca71a019fe13a 168 Gene3D G3DSA:3.40.630.30 1 168 7.0E-48 T 12-10-2018 vfu_A01966 f7f5dbb2a89858af5716a2f81d8ce919 172 Gene3D G3DSA:3.10.450.50 1 172 4.2E-57 T 12-10-2018 vfu_A01966 f7f5dbb2a89858af5716a2f81d8ce919 172 SUPERFAMILY SSF54427 4 171 1.15E-42 T 12-10-2018 IPR032710 NTF2-like domain superfamily vfu_A01966 f7f5dbb2a89858af5716a2f81d8ce919 172 Pfam PF00866 Ring hydroxylating beta subunit 18 164 1.1E-47 T 12-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 vfu_B01020 955c37d78fc5b2c8693867c9e839f147 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 12-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 vfu_B01020 955c37d78fc5b2c8693867c9e839f147 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 35 462 1.8E-55 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_B01020 955c37d78fc5b2c8693867c9e839f147 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 43 461 1.6E-111 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_A01286 9018bae32df59675ccbcb7815793e7a3 399 Gene3D G3DSA:1.20.1720.10 5 382 2.2E-71 T 12-10-2018 vfu_A01286 9018bae32df59675ccbcb7815793e7a3 399 SUPERFAMILY SSF103473 3 388 1.96E-51 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_A01286 9018bae32df59675ccbcb7815793e7a3 399 Pfam PF07690 Major Facilitator Superfamily 9 351 2.0E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A00574 d6ffea2f09b4d94cf17f1c2d43160550 181 Gene3D G3DSA:1.20.120.1490 38 155 2.5E-27 T 12-10-2018 vfu_A00574 d6ffea2f09b4d94cf17f1c2d43160550 181 Pfam PF07813 LTXXQ motif family protein 41 145 2.8E-19 T 12-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 vfu_A02647 784005f51f69e662467f8f229de594e0 207 Pfam PF04390 Lipopolysaccharide-assembly 47 161 2.3E-10 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 vfu_A02647 784005f51f69e662467f8f229de594e0 207 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 25.208 T 12-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 vfu_A02647 784005f51f69e662467f8f229de594e0 207 Gene3D G3DSA:3.30.160.150 24 170 1.9E-49 T 12-10-2018 vfu_A00625 135095b25a65ca4b25b6f90a75044f4f 87 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 5.4E-37 T 12-10-2018 IPR022072 Protein of unknown function DUF3624 vfu_B00073 139991c5723cd9417c452ae0688c44a1 126 SUPERFAMILY SSF52091 1 124 2.12E-38 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B00073 139991c5723cd9417c452ae0688c44a1 126 Gene3D G3DSA:3.40.50.10600 1 125 6.5E-47 T 12-10-2018 IPR038396 SpoIIAA-like superfamily vfu_B00073 139991c5723cd9417c452ae0688c44a1 126 Pfam PF11964 SpoIIAA-like 21 124 6.7E-19 T 12-10-2018 IPR021866 SpoIIAA-like vfu_A02049 395fba27aac9fcee469260c51b29ed38 176 PIRSF PIRSF016919 1 176 9.9E-53 T 12-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein vfu_A02049 395fba27aac9fcee469260c51b29ed38 176 Pfam PF04955 HupE / UreJ protein 2 171 1.0E-51 T 12-10-2018 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein vfu_B00594 0b5c7ce0b8e77ba24c08d345a28dd178 353 Pfam PF07690 Major Facilitator Superfamily 2 309 1.5E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_B00594 0b5c7ce0b8e77ba24c08d345a28dd178 353 SUPERFAMILY SSF103473 2 350 1.24E-35 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00594 0b5c7ce0b8e77ba24c08d345a28dd178 353 Gene3D G3DSA:1.20.1250.20 1 348 6.9E-29 T 12-10-2018 vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 Gene3D G3DSA:3.40.47.10 261 408 4.7E-45 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 SUPERFAMILY SSF53901 3 252 5.5E-54 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 SUPERFAMILY SSF53901 216 406 1.12E-60 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 363 1.1E-28 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 Gene3D G3DSA:3.40.47.10 1 255 5.5E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 SMART SM00825 Beta-ketoacyl synthase 5 409 1.6E-10 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain vfu_A01512 c60f7cc0500d0776c8efdc3d686fab62 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 5.5E-40 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal vfu_A00968 6f5fc3b843f38d8b380c9be2e57465e9 221 SUPERFAMILY SSF52980 2 220 5.36E-81 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A00968 6f5fc3b843f38d8b380c9be2e57465e9 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 218 1.4E-100 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 vfu_A00968 6f5fc3b843f38d8b380c9be2e57465e9 221 SMART SM00927 53 151 1.4E-65 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 vfu_A00968 6f5fc3b843f38d8b380c9be2e57465e9 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 2.8E-33 T 12-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 vfu_A00968 6f5fc3b843f38d8b380c9be2e57465e9 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 146.389 T 12-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 vfu_A00968 6f5fc3b843f38d8b380c9be2e57465e9 221 Gene3D G3DSA:3.40.600.10 1 220 2.6E-55 T 12-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 SUPERFAMILY SSF52540 462 695 1.13E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 Gene3D G3DSA:3.40.50.300 463 706 1.3E-74 T 12-10-2018 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 Pfam PF00005 ABC transporter 490 638 8.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 ProSitePatterns PS00211 ABC transporters family signature. 610 624 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 Gene3D G3DSA:1.20.1560.10 144 457 4.8E-55 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 6 701 1.2E-292 T 12-10-2018 IPR017750 ATPase, type I secretion system vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 SUPERFAMILY SSF90123 139 455 3.92E-49 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 Gene3D G3DSA:3.90.70.10 2 129 8.1E-37 T 12-10-2018 vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 SMART SM00382 498 684 1.1E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00346 8bd66aed5b078c70f498d5d6dba0af29 707 Pfam PF00664 ABC transporter transmembrane region 161 420 9.5E-23 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 vfu_B00384 23f0f68ac946ffac0c7be12992264f0a 360 Gene3D G3DSA:3.90.1340.10 192 243 2.3E-14 T 12-10-2018 IPR037053 Phage tail collar domain superfamily vfu_B00384 23f0f68ac946ffac0c7be12992264f0a 360 SUPERFAMILY SSF88874 191 359 8.63E-20 T 12-10-2018 vfu_B00384 23f0f68ac946ffac0c7be12992264f0a 360 Pfam PF12571 Phage tail-collar fibre protein 3 125 3.5E-5 T 12-10-2018 IPR022225 Phage tail fibre protein vfu_A00435 3f1c9b095d9f325911fdb8b0ce8025f8 816 Pfam PF12633 Adenylate cyclase NT domain 3 172 2.4E-69 T 12-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 vfu_A00435 3f1c9b095d9f325911fdb8b0ce8025f8 816 Pfam PF01295 Adenylate cyclase, class-I 200 802 6.3E-253 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 vfu_A00435 3f1c9b095d9f325911fdb8b0ce8025f8 816 PIRSF PIRSF001444 1 816 0.0 T 12-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 vfu_A01835 5d58f9f9acd5eb33095e3cf074d3c024 235 Gene3D G3DSA:3.20.20.190 1 235 4.6E-68 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 vfu_A01835 5d58f9f9acd5eb33095e3cf074d3c024 235 SUPERFAMILY SSF51695 3 234 4.78E-64 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 vfu_A01835 5d58f9f9acd5eb33095e3cf074d3c024 235 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 231 2.4E-35 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 vfu_A01514 99e0a5d51f2d0245f00d1a4e2c23243c 154 PIRSF PIRSF020565 1 154 1.1E-61 T 12-10-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted vfu_A01514 99e0a5d51f2d0245f00d1a4e2c23243c 154 Gene3D G3DSA:3.10.129.10 2 143 4.5E-22 T 12-10-2018 vfu_A01514 99e0a5d51f2d0245f00d1a4e2c23243c 154 SUPERFAMILY SSF54637 5 143 5.96E-27 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A02516 b4f47df1a27f74c2a176e7ea18b69c5f 336 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 22 328 1.2E-91 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid vfu_A02516 b4f47df1a27f74c2a176e7ea18b69c5f 336 Pfam PF05125 Phage major capsid protein, P2 family 14 328 5.2E-106 T 12-10-2018 IPR006441 Bacteriophage P2, GpN, major capsid vfu_A00710 9e361c976137a7f765c435ad74394281 238 Gene3D G3DSA:3.40.50.300 10 230 1.6E-54 T 12-10-2018 vfu_A00710 9e361c976137a7f765c435ad74394281 238 SUPERFAMILY SSF52540 6 228 1.05E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00710 9e361c976137a7f765c435ad74394281 238 Pfam PF00005 ABC transporter 35 184 1.7E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A00710 9e361c976137a7f765c435ad74394281 238 SMART SM00382 39 232 1.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_A01839 b268bdc7f5c39224f175c4ba2641896d 41 SUPERFAMILY SSF52540 3 34 3.7E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01095 f972c24e861cb3341598b896cb1b8fe8 416 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 400 1.4E-141 T 12-10-2018 IPR020010 Conserved hypothetical protein CHP03503 vfu_A00473 8647252254399811f58e17c7aa6ccbcd 135 Pfam PF03748 Flagellar basal body-associated protein FliL 33 135 2.9E-19 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 vfu_A02312 666ee0fe8a30ba6e5618badea9c0b0ee 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 1.6E-110 T 12-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A02312 666ee0fe8a30ba6e5618badea9c0b0ee 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.7E-31 T 12-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A02312 666ee0fe8a30ba6e5618badea9c0b0ee 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.803 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A02312 666ee0fe8a30ba6e5618badea9c0b0ee 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 12-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A02312 666ee0fe8a30ba6e5618badea9c0b0ee 400 Gene3D G3DSA:3.40.50.720 1 399 2.3E-179 T 12-10-2018 vfu_A00004 67a00f44be46394ca78ab54db422cbb9 91 Pfam PF04077 DsrH like protein 9 87 4.9E-22 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 vfu_A00004 67a00f44be46394ca78ab54db422cbb9 91 Gene3D G3DSA:3.40.1260.10 1 91 1.5E-22 T 12-10-2018 IPR027396 DsrEFH-like vfu_A00004 67a00f44be46394ca78ab54db422cbb9 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 91 2.7E-22 T 12-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 vfu_A00004 67a00f44be46394ca78ab54db422cbb9 91 SUPERFAMILY SSF75169 2 91 2.35E-21 T 12-10-2018 IPR027396 DsrEFH-like vfu_A02628 43529782661e39c29aa7cdcd64221185 149 SUPERFAMILY SSF141322 87 147 2.09E-7 T 12-10-2018 vfu_A02628 43529782661e39c29aa7cdcd64221185 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 149 8.2E-23 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain vfu_A02628 43529782661e39c29aa7cdcd64221185 149 Gene3D G3DSA:2.40.50.140 79 149 5.4E-11 T 12-10-2018 vfu_B00717 bc1925d09218ab84f6892d3e23192256 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 252 6.3E-61 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00717 bc1925d09218ab84f6892d3e23192256 259 SUPERFAMILY SSF53850 10 252 5.69E-67 T 12-10-2018 vfu_B00717 bc1925d09218ab84f6892d3e23192256 259 SMART SM00062 27 254 4.4E-56 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_B00717 bc1925d09218ab84f6892d3e23192256 259 Gene3D G3DSA:3.40.190.10 30 251 2.7E-72 T 12-10-2018 vfu_B00717 bc1925d09218ab84f6892d3e23192256 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site vfu_B00717 bc1925d09218ab84f6892d3e23192256 259 Gene3D G3DSA:3.40.190.10 113 210 2.7E-72 T 12-10-2018 vfu_A01720 34583cb9793ccc02e6a19ef93046459a 364 Pfam PF06965 Na+/H+ antiporter 1 1 354 1.1E-139 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 vfu_A01720 34583cb9793ccc02e6a19ef93046459a 364 Gene3D G3DSA:1.20.1530.10 1 362 6.4E-141 T 12-10-2018 IPR023171 Na/H antiporter domain superfamily vfu_A01720 34583cb9793ccc02e6a19ef93046459a 364 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 1 360 21.962 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 vfu_A01720 34583cb9793ccc02e6a19ef93046459a 364 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 1 354 1.9E-178 T 12-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 vfu_A00851 9fe07d2c57bcb31b5e9325002c45591a 419 Pfam PF01384 Phosphate transporter family 26 407 8.8E-113 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 vfu_B00519 2108783efa01124ce961122ffb380f5e 681 SMART SM00642 201 643 9.0E-88 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B00519 2108783efa01124ce961122ffb380f5e 681 Pfam PF00128 Alpha amylase, catalytic domain 234 602 2.5E-49 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 vfu_B00519 2108783efa01124ce961122ffb380f5e 681 SUPERFAMILY SSF51445 186 652 3.09E-88 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily vfu_B00519 2108783efa01124ce961122ffb380f5e 681 Gene3D G3DSA:3.20.20.80 427 650 5.0E-35 T 12-10-2018 vfu_B00519 2108783efa01124ce961122ffb380f5e 681 Gene3D G3DSA:3.20.20.80 185 425 1.4E-56 T 12-10-2018 vfu_B00519 2108783efa01124ce961122ffb380f5e 681 PIRSF PIRSF036917 1 681 0.0 T 12-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 vfu_B00174 a1fe7868aff27b7214164a74e9318c3c 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00174 a1fe7868aff27b7214164a74e9318c3c 242 PIRSF PIRSF039085 1 242 1.7E-110 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 vfu_B00174 a1fe7868aff27b7214164a74e9318c3c 242 SMART SM00382 28 215 7.0E-19 T 12-10-2018 IPR003593 AAA+ ATPase domain vfu_B00174 a1fe7868aff27b7214164a74e9318c3c 242 Gene3D G3DSA:3.40.50.300 1 242 1.1E-77 T 12-10-2018 vfu_B00174 a1fe7868aff27b7214164a74e9318c3c 242 SUPERFAMILY SSF52540 3 237 9.35E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_B00174 a1fe7868aff27b7214164a74e9318c3c 242 Pfam PF00005 ABC transporter 19 167 6.2E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_A02858 c5d104babf2c6cd384123494adbb8225 143 Pfam PF07811 TadE-like protein 11 53 1.2E-10 T 12-10-2018 IPR012495 TadE-like vfu_A00175 4b32a2584ee14cd0ac141e3996b2973c 126 PIRSF PIRSF028299 3 126 1.6E-28 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_A00175 4b32a2584ee14cd0ac141e3996b2973c 126 Pfam PF11777 Protein of unknown function (DUF3316) 5 119 1.4E-19 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_A02630 90abcbae24fabc4245a32de196a4240c 269 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 154 224 7.7E-7 T 12-10-2018 IPR018635 Uncharacterised protein family UPF0319 vfu_A02448 b8a09fd24178b8b7353fad5c3523f240 231 Pfam PF01066 CDP-alcohol phosphatidyltransferase 34 105 4.0E-8 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 vfu_A02448 b8a09fd24178b8b7353fad5c3523f240 231 Gene3D G3DSA:1.20.120.1760 16 218 4.1E-26 T 12-10-2018 vfu_B01410 fa073d9f641f4fb5468b0ea426a875f6 305 SUPERFAMILY SSF110849 27 256 4.03E-55 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily vfu_B01410 fa073d9f641f4fb5468b0ea426a875f6 305 Pfam PF08857 Putative ParB-like nuclease 33 228 2.5E-50 T 12-10-2018 IPR014956 Putative ParB-like nuclease vfu_B01410 fa073d9f641f4fb5468b0ea426a875f6 305 Gene3D G3DSA:3.90.1530.10 77 195 4.3E-11 T 12-10-2018 vfu_A01052 3105f686bf5958a63a2a1503342202b8 430 PIRSF PIRSF005353 1 430 6.1E-186 T 12-10-2018 IPR026033 Purine permease PbuG-like vfu_A01052 3105f686bf5958a63a2a1503342202b8 430 Pfam PF00860 Permease family 17 390 4.8E-53 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 vfu_A02966 39ea41125a785f32b3c3cd1a134cb380 192 Gene3D G3DSA:1.10.530.10 28 189 3.1E-14 T 12-10-2018 vfu_A02966 39ea41125a785f32b3c3cd1a134cb380 192 SUPERFAMILY SSF53955 6 157 1.53E-23 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily vfu_B00416 8acf02a4c3e338cbd382cd903cefe1f3 142 Pfam PF02754 Cysteine-rich domain 39 122 2.0E-12 T 12-10-2018 IPR004017 Cysteine-rich domain vfu_A02085 f31da70c2b44780a2887e971b13e6a2a 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 7.5E-8 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 vfu_A02876 8668ee7a3282b365a973f0c37d045a50 201 Pfam PF10144 Bacterial virulence factor haemolysin 6 151 1.8E-40 T 12-10-2018 IPR019305 Uncharacterised protein family Smp vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 Gene3D G3DSA:3.30.300.130 75 163 3.8E-19 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 1 166 1.4E-83 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 Pfam PF01106 NifU-like domain 85 151 1.8E-19 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 SUPERFAMILY SSF89360 1 71 9.81E-13 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 166 34.685 T 12-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 93 152 2.0E-26 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 SUPERFAMILY SSF117916 69 158 1.05E-22 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 Pfam PF01521 Iron-sulphur cluster biosynthesis 24 73 3.3E-7 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 vfu_A00524 d0cf464262deb6ff5b9eb88d5c33853d 166 Gene3D G3DSA:2.60.300.12 1 72 8.4E-7 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 vfu_A00391 09a0d3b2f5554fbd74a85cd13f16c657 141 Pfam PF00582 Universal stress protein family 3 138 8.5E-22 T 12-10-2018 IPR006016 UspA vfu_A00391 09a0d3b2f5554fbd74a85cd13f16c657 141 PIRSF PIRSF006276 1 141 7.2E-53 T 12-10-2018 IPR006015 Universal stress protein A vfu_A00391 09a0d3b2f5554fbd74a85cd13f16c657 141 SUPERFAMILY SSF52402 3 139 1.17E-33 T 12-10-2018 vfu_A00391 09a0d3b2f5554fbd74a85cd13f16c657 141 Gene3D G3DSA:3.40.50.620 2 141 2.0E-48 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold vfu_A02810 d3f415c38793198947dfacac34d025dd 504 PIRSF PIRSF001267 5 504 4.6E-202 T 12-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 14 308 2.5E-103 T 12-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 SUPERFAMILY SSF53067 15 135 6.48E-36 T 12-10-2018 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 Gene3D G3DSA:3.30.420.150 119 297 7.7E-92 T 12-10-2018 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 SUPERFAMILY SSF109604 315 503 2.39E-45 T 12-10-2018 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 Gene3D G3DSA:1.10.3210.10 312 504 2.6E-57 T 12-10-2018 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 Pfam PF02541 Ppx/GppA phosphatase family 28 310 6.2E-85 T 12-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 SUPERFAMILY SSF53067 140 311 9.71E-47 T 12-10-2018 vfu_A02810 d3f415c38793198947dfacac34d025dd 504 Gene3D G3DSA:3.30.420.40 16 305 7.7E-92 T 12-10-2018 vfu_A02384 bdf4e0053577b6300baeb8007fe9e703 515 Pfam PF04293 SpoVR like protein 23 452 1.9E-174 T 12-10-2018 IPR007390 Sporulation stage V, protein R vfu_A01006 27e0e734a171b2a25bbd71ff0a2c1cf4 241 Gene3D G3DSA:1.25.40.10 28 241 3.5E-54 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01006 27e0e734a171b2a25bbd71ff0a2c1cf4 241 Pfam PF13525 Outer membrane lipoprotein 26 233 1.6E-80 T 12-10-2018 IPR039565 Outer membrane lipoprotein BamD-like vfu_A01006 27e0e734a171b2a25bbd71ff0a2c1cf4 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 2.0E-79 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD vfu_A01006 27e0e734a171b2a25bbd71ff0a2c1cf4 241 SUPERFAMILY SSF48452 30 119 2.47E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A01006 27e0e734a171b2a25bbd71ff0a2c1cf4 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 37.918 T 12-10-2018 IPR017689 Outer membrane protein assembly factor BamD vfu_A00322 5ae0712ef9a80597d8692d7088369958 136 SUPERFAMILY SSF103481 29 114 2.35E-16 T 12-10-2018 vfu_A00322 5ae0712ef9a80597d8692d7088369958 136 Gene3D G3DSA:1.10.3730.20 5 116 3.0E-28 T 12-10-2018 vfu_A00322 5ae0712ef9a80597d8692d7088369958 136 Pfam PF00893 Small Multidrug Resistance protein 7 101 4.0E-20 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 vfu_A01731 f48bf915e9a6319b3e9c988db931132d 438 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 27 436 1.0E-86 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A01731 f48bf915e9a6319b3e9c988db931132d 438 PIRSF PIRSF006066 12 438 4.2E-71 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A01731 f48bf915e9a6319b3e9c988db931132d 438 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 18 433 6.3E-80 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_B00027 c1bb1ebb45107653d4ae73eccad07ac5 539 Pfam PF00501 AMP-binding enzyme 24 443 3.3E-96 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 vfu_B00027 c1bb1ebb45107653d4ae73eccad07ac5 539 Gene3D G3DSA:3.40.50.12780 7 438 2.2E-113 T 12-10-2018 vfu_B00027 c1bb1ebb45107653d4ae73eccad07ac5 539 Gene3D G3DSA:3.30.300.310 439 539 4.6E-32 T 12-10-2018 vfu_B00027 c1bb1ebb45107653d4ae73eccad07ac5 539 SUPERFAMILY SSF56801 13 537 2.09E-140 T 12-10-2018 vfu_B00027 c1bb1ebb45107653d4ae73eccad07ac5 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 526 3.5E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain vfu_A00170 78f5b7e4228f7e171f8788d575794585 147 Gene3D G3DSA:3.10.450.430 1 147 2.7E-61 T 12-10-2018 vfu_A00170 78f5b7e4228f7e171f8788d575794585 147 Pfam PF10980 Protein of unknown function (DUF2787) 15 145 5.9E-50 T 12-10-2018 IPR021248 Protein of unknown function DUF2787 vfu_A00597 6c1acc6cc5fa4d2022937cacf418531f 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 1.9E-6 T 12-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 vfu_A00597 6c1acc6cc5fa4d2022937cacf418531f 115 SUPERFAMILY SSF55331 2 115 9.3E-36 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily vfu_A00597 6c1acc6cc5fa4d2022937cacf418531f 115 Gene3D G3DSA:3.30.429.10 1 115 1.6E-33 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily vfu_A00206 fd7f1ed1d605ce5ab8c051c08fe82838 68 SUPERFAMILY SSF46955 4 59 4.94E-5 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily vfu_A00206 fd7f1ed1d605ce5ab8c051c08fe82838 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 3 54 7.6E-25 T 12-10-2018 IPR010260 DNA-binding transcriptional activator AlpA vfu_B00603 aff411a555111edaba969252894f5efc 361 Gene3D G3DSA:2.60.40.1090 208 360 3.1E-13 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_B00603 aff411a555111edaba969252894f5efc 361 SUPERFAMILY SSF49401 216 361 1.64E-15 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_B00603 aff411a555111edaba969252894f5efc 361 Pfam PF00419 Fimbrial protein 211 360 1.7E-15 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 vfu_B00430 346bb2ae62d9f6d4d44763dc44178453 247 Pfam PF13727 CoA-binding domain 65 245 1.9E-27 T 12-10-2018 vfu_B00430 346bb2ae62d9f6d4d44763dc44178453 247 SUPERFAMILY SSF51735 145 246 1.2E-7 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00430 346bb2ae62d9f6d4d44763dc44178453 247 Gene3D G3DSA:3.40.50.720 144 247 1.1E-10 T 12-10-2018 vfu_B00548 e337b21b6f6e66138472dadf4f335681 208 SUPERFAMILY SSF48613 1 194 4.0E-59 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 vfu_B00548 e337b21b6f6e66138472dadf4f335681 208 Pfam PF03070 TENA/THI-4/PQQC family 1 195 9.3E-39 T 12-10-2018 IPR004305 Thiaminase-2/PQQC vfu_B00548 e337b21b6f6e66138472dadf4f335681 208 Gene3D G3DSA:1.20.910.10 1 204 5.1E-54 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 vfu_A00141 bb863fd9119d56b8f46ca1ef8c25d28b 335 Gene3D G3DSA:3.40.50.2000 1 135 1.0E-44 T 12-10-2018 vfu_A00141 bb863fd9119d56b8f46ca1ef8c25d28b 335 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 1 328 3.4E-138 T 12-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 vfu_A00141 bb863fd9119d56b8f46ca1ef8c25d28b 335 SUPERFAMILY SSF53756 1 329 1.24E-88 T 12-10-2018 vfu_A00141 bb863fd9119d56b8f46ca1ef8c25d28b 335 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 56 311 7.4E-72 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 vfu_A00141 bb863fd9119d56b8f46ca1ef8c25d28b 335 Gene3D G3DSA:3.40.50.2000 150 331 1.2E-59 T 12-10-2018 vfu_B00447 57cef0c779348b42d5656748d6d88bef 528 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.1E-170 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_B00447 57cef0c779348b42d5656748d6d88bef 528 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 74 521 1.3E-135 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_B00883 ffbe27d2f549ff5f87d61f13dbfb8fb1 211 SMART SM01120 32 206 4.6E-80 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 vfu_B00883 ffbe27d2f549ff5f87d61f13dbfb8fb1 211 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 7.7E-80 T 12-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 vfu_B00883 ffbe27d2f549ff5f87d61f13dbfb8fb1 211 Gene3D G3DSA:1.25.40.340 1 209 2.3E-69 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 vfu_B00883 ffbe27d2f549ff5f87d61f13dbfb8fb1 211 SUPERFAMILY SSF101473 2 207 3.66E-58 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 vfu_B00883 ffbe27d2f549ff5f87d61f13dbfb8fb1 211 Pfam PF02734 DAK2 domain 33 205 4.0E-55 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 vfu_A00329 54c73a8d065488b8dd16848de6b09cbf 85 SUPERFAMILY SSF159133 1 83 3.27E-17 T 12-10-2018 IPR036677 EutN/Ccml superfamily vfu_A00329 54c73a8d065488b8dd16848de6b09cbf 85 Gene3D G3DSA:2.40.50.220 1 85 8.3E-19 T 12-10-2018 IPR036677 EutN/Ccml superfamily vfu_A00329 54c73a8d065488b8dd16848de6b09cbf 85 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 78 1.8E-17 T 12-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml vfu_A02770 45d57a8bd35e98d5d5f8e3eac26982b5 294 SUPERFAMILY SSF55186 123 272 4.53E-14 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 vfu_A02770 45d57a8bd35e98d5d5f8e3eac26982b5 294 Gene3D G3DSA:3.30.980.10 122 283 8.7E-7 T 12-10-2018 vfu_A02887 527b0391bd7c7438036f6ef930340882 133 Pfam PF01235 Sodium:alanine symporter family 2 110 1.8E-34 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02887 527b0391bd7c7438036f6ef930340882 133 PRINTS PR00175 Sodium/alanine symporter signature 6 28 3.6E-18 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_A02887 527b0391bd7c7438036f6ef930340882 133 PRINTS PR00175 Sodium/alanine symporter signature 67 87 3.6E-18 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 vfu_B00121 c50eb539fc45eabc444bee0f73055b14 302 TIGRFAM TIGR03340 phn_DUF6: phosphonate utilization associated putative membrane protein 4 297 4.9E-102 T 12-10-2018 IPR017725 Phosphonate utilization associated transmembrane protein, putative vfu_B00121 c50eb539fc45eabc444bee0f73055b14 302 SUPERFAMILY SSF103481 205 298 8.37E-6 T 12-10-2018 vfu_B00121 c50eb539fc45eabc444bee0f73055b14 302 SUPERFAMILY SSF103481 42 141 1.31E-8 T 12-10-2018 vfu_A00309 1129a7d6006b0d47a462ff363456893a 138 SUPERFAMILY SSF54534 46 121 9.29E-11 T 12-10-2018 vfu_A00309 1129a7d6006b0d47a462ff363456893a 138 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 47 120 5.0E-10 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 vfu_A00309 1129a7d6006b0d47a462ff363456893a 138 PIRSF PIRSF006092 32 122 1.4E-10 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 vfu_A00309 1129a7d6006b0d47a462ff363456893a 138 Gene3D G3DSA:3.10.50.30 45 127 9.7E-12 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 vfu_B00364 33ded7cf3c6b9600b46b8998d624ba66 334 Gene3D G3DSA:1.10.443.10 158 324 2.4E-38 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 vfu_B00364 33ded7cf3c6b9600b46b8998d624ba66 334 SUPERFAMILY SSF56349 59 314 2.27E-44 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 vfu_B00364 33ded7cf3c6b9600b46b8998d624ba66 334 Pfam PF00589 Phage integrase family 265 305 8.3E-10 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 vfu_A01658 aa1983e64c30518e50c331ef3008745d 320 Gene3D G3DSA:1.10.3720.10 69 308 2.4E-23 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01658 aa1983e64c30518e50c331ef3008745d 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 5.2E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01658 aa1983e64c30518e50c331ef3008745d 320 SUPERFAMILY SSF161098 71 298 1.6E-21 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01195 a35b6dc8dd7baaf38f63952f19bc8a7a 147 Hamap MF_01661 D-ribose pyranase [rbsD]. 9 147 31.714 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 vfu_B01195 a35b6dc8dd7baaf38f63952f19bc8a7a 147 Gene3D G3DSA:3.40.1650.10 16 144 2.1E-35 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 vfu_B01195 a35b6dc8dd7baaf38f63952f19bc8a7a 147 SUPERFAMILY SSF102546 9 147 1.7E-42 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 vfu_B01195 a35b6dc8dd7baaf38f63952f19bc8a7a 147 Pfam PF05025 RbsD / FucU transport protein family 9 146 4.1E-47 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.9E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.9E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 30.041 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 PRINTS PR01591 DNA-binding protein FIS signature 42 57 4.1E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 PRINTS PR01591 DNA-binding protein FIS signature 57 69 4.1E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 PRINTS PR01591 DNA-binding protein FIS signature 9 26 4.1E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 PRINTS PR01591 DNA-binding protein FIS signature 26 42 4.1E-31 T 12-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 5.4E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 Gene3D G3DSA:1.10.10.60 1 98 1.7E-30 T 12-10-2018 vfu_A00072 1bbea1a66140276327edd8a9ca2b26ec 132 SUPERFAMILY SSF46689 8 97 1.88E-22 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01949 7ecf5d811f303fc923461fd4134cc775 149 SUPERFAMILY SSF51316 23 145 4.66E-55 T 12-10-2018 IPR011057 Mss4-like superfamily vfu_A01949 7ecf5d811f303fc923461fd4134cc775 149 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 143 3.6E-51 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_A01949 7ecf5d811f303fc923461fd4134cc775 149 Pfam PF01641 SelR domain 28 144 5.5E-49 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 vfu_A01949 7ecf5d811f303fc923461fd4134cc775 149 Gene3D G3DSA:2.170.150.20 6 148 4.4E-55 T 12-10-2018 vfu_A00376 e1ead5dc1ba2efd78f254f14353f456e 280 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 4 270 4.0E-129 T 12-10-2018 IPR017784 ABC transporter, choline, permease protein vfu_A00376 e1ead5dc1ba2efd78f254f14353f456e 280 Gene3D G3DSA:1.10.3720.10 83 271 9.8E-33 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00376 e1ead5dc1ba2efd78f254f14353f456e 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 265 4.6E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00376 e1ead5dc1ba2efd78f254f14353f456e 280 SUPERFAMILY SSF161098 86 270 4.84E-38 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02572 7f7c078e5864a4f544b236babee6e614 138 SMART SM00116 80 127 1.5E-8 T 12-10-2018 IPR000644 CBS domain vfu_A02572 7f7c078e5864a4f544b236babee6e614 138 SMART SM00116 13 61 0.025 T 12-10-2018 IPR000644 CBS domain vfu_A02572 7f7c078e5864a4f544b236babee6e614 138 Pfam PF00571 CBS domain 6 60 3.9E-10 T 12-10-2018 IPR000644 CBS domain vfu_A02572 7f7c078e5864a4f544b236babee6e614 138 Pfam PF00571 CBS domain 73 126 5.7E-13 T 12-10-2018 IPR000644 CBS domain vfu_A02572 7f7c078e5864a4f544b236babee6e614 138 Gene3D G3DSA:3.10.580.10 1 128 1.2E-30 T 12-10-2018 vfu_A02572 7f7c078e5864a4f544b236babee6e614 138 SUPERFAMILY SSF54631 1 126 3.28E-33 T 12-10-2018 vfu_A01923 be9ab7bde9e9586bb0d18338f44dd99f 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 4.7E-93 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01923 be9ab7bde9e9586bb0d18338f44dd99f 172 Pfam PF07977 FabA-like domain 29 158 1.7E-54 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01923 be9ab7bde9e9586bb0d18338f44dd99f 172 Gene3D G3DSA:3.10.129.10 2 172 7.9E-66 T 12-10-2018 vfu_A01923 be9ab7bde9e9586bb0d18338f44dd99f 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.668 T 12-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 vfu_A01923 be9ab7bde9e9586bb0d18338f44dd99f 172 SUPERFAMILY SSF54637 3 169 5.67E-57 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A02092 47c028afe943de6eb14f71815563e47d 434 Gene3D G3DSA:1.10.3720.10 178 433 1.3E-64 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A02092 47c028afe943de6eb14f71815563e47d 434 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 219 416 4.5E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A02092 47c028afe943de6eb14f71815563e47d 434 SUPERFAMILY SSF160964 130 187 1.96E-8 T 12-10-2018 vfu_A02092 47c028afe943de6eb14f71815563e47d 434 SUPERFAMILY SSF161098 182 418 8.11E-55 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A00279 b2ac2d8fbb4f681787c088e8bbbd90a4 263 Pfam PF07070 SpoOM protein 4 218 3.1E-78 T 12-10-2018 IPR009776 Sporulation stage 0, protein M vfu_B01217 8750e497742700a09f20ab0ef8c30d84 389 Pfam PF14583 Oligogalacturonate lyase 3 388 1.4E-241 T 12-10-2018 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6 vfu_B01217 8750e497742700a09f20ab0ef8c30d84 389 SUPERFAMILY SSF82171 17 384 1.44E-22 T 12-10-2018 vfu_B01217 8750e497742700a09f20ab0ef8c30d84 389 Gene3D G3DSA:2.130.10.10 3 389 4.0E-164 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 vfu_A01478 e86183bb5c975e7e74b683415c2c3679 337 SUPERFAMILY SSF81345 4 331 8.5E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A01478 e86183bb5c975e7e74b683415c2c3679 337 Gene3D G3DSA:1.10.3470.10 7 335 1.2E-91 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A01478 e86183bb5c975e7e74b683415c2c3679 337 Pfam PF01032 FecCD transport family 21 331 6.4E-90 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_A01956 dde71d15caf2364bef7b2bbe3ce89ea4 264 Pfam PF13503 Domain of unknown function (DUF4123) 23 126 4.3E-19 T 12-10-2018 IPR025391 Domain of unknown function DUF4123 vfu_A02501 9fd1686ae30f160b5ff589caeccd9a31 200 Pfam PF09684 Phage tail protein (Tail_P2_I) 20 106 4.6E-5 T 12-10-2018 IPR006521 Tail protein I vfu_A02590 fc8bc8d5f0b935733addfbb3e1dfaa50 230 PIRSF PIRSF006102 1 219 2.9E-77 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_A02590 fc8bc8d5f0b935733addfbb3e1dfaa50 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 27.989 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 vfu_A02590 fc8bc8d5f0b935733addfbb3e1dfaa50 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 2.8E-89 T 12-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 vfu_A02590 fc8bc8d5f0b935733addfbb3e1dfaa50 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 5.3E-65 T 12-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 vfu_A01882 25560fea59513912c1b9d01ba535466b 219 Pfam PF02613 Nitrate reductase delta subunit 52 165 1.8E-31 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone vfu_A01882 25560fea59513912c1b9d01ba535466b 219 SUPERFAMILY SSF89155 15 200 4.71E-52 T 12-10-2018 IPR036411 TorD-like superfamily vfu_A01882 25560fea59513912c1b9d01ba535466b 219 Gene3D G3DSA:1.10.3480.10 9 201 3.9E-42 T 12-10-2018 vfu_B01360 249ccb7f6133d67c1f55430f4c3ac8c0 524 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 53 507 8.6E-134 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_B01360 249ccb7f6133d67c1f55430f4c3ac8c0 524 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 507 7.1E-171 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_A02327 45c56efb95ec72e116eaf3fa119be010 293 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 37 293 1.8E-90 T 12-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 vfu_A01788 87af312d00684e252da4ad6f633cbd03 191 Gene3D G3DSA:3.40.630.30 14 190 5.2E-46 T 12-10-2018 vfu_A01788 87af312d00684e252da4ad6f633cbd03 191 Pfam PF13302 Acetyltransferase (GNAT) domain 17 160 7.6E-21 T 12-10-2018 IPR000182 GNAT domain vfu_A01788 87af312d00684e252da4ad6f633cbd03 191 SUPERFAMILY SSF55729 14 184 6.71E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 SUPERFAMILY SSF51735 3 245 8.59E-71 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.4E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 242 6.7E-52 T 12-10-2018 vfu_B00263 9307013079ea8dfb9a562b04115d2ef7 246 Gene3D G3DSA:3.40.50.720 1 245 3.9E-65 T 12-10-2018 vfu_A01636 a6462b5514754b55819e80ba1323636b 277 Gene3D G3DSA:3.20.20.410 1 261 8.9E-43 T 12-10-2018 IPR036520 UPF0759 superfamily vfu_A01636 a6462b5514754b55819e80ba1323636b 277 SUPERFAMILY SSF117396 1 254 9.29E-71 T 12-10-2018 IPR036520 UPF0759 superfamily vfu_A01636 a6462b5514754b55819e80ba1323636b 277 Pfam PF01904 Protein of unknown function DUF72 12 249 1.9E-56 T 12-10-2018 IPR002763 Protein of unknown function DUF72 vfu_A00115 6243080855723b15954d8a9a1c0be687 43 Gene3D G3DSA:3.90.550.10 1 43 1.3E-5 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases vfu_A00972 eb1349933a4aa638b2ab1ace3304c016 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.332 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 vfu_A00972 eb1349933a4aa638b2ab1ace3304c016 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 6.2E-93 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 vfu_A00972 eb1349933a4aa638b2ab1ace3304c016 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 vfu_A00972 eb1349933a4aa638b2ab1ace3304c016 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 1.0E-83 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 vfu_A00278 61a2b87afbbf6aa006a4eda6187052e9 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 10 211 1.3E-70 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 vfu_A00278 61a2b87afbbf6aa006a4eda6187052e9 214 Pfam PF03006 Haemolysin-III related 6 204 1.6E-39 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 vfu_A01730 1f6a711a660dce78d43b11ee26215b4c 185 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 39 176 8.7E-20 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A01322 cc10bd0601da0242ab2f713b475badee 192 Gene3D G3DSA:2.40.160.20 24 192 6.7E-11 T 12-10-2018 vfu_A01322 cc10bd0601da0242ab2f713b475badee 192 SUPERFAMILY SSF56925 54 192 3.4E-16 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A00145 20d0e7916203b47ff184728a9249ac6d 356 Gene3D G3DSA:3.40.50.2000 5 157 1.8E-26 T 12-10-2018 vfu_A00145 20d0e7916203b47ff184728a9249ac6d 356 SUPERFAMILY SSF53756 9 345 5.18E-86 T 12-10-2018 vfu_A00145 20d0e7916203b47ff184728a9249ac6d 356 Gene3D G3DSA:3.40.50.2000 162 348 6.4E-38 T 12-10-2018 vfu_A00145 20d0e7916203b47ff184728a9249ac6d 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 301 1.3E-55 T 12-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 vfu_B01208 9768846ce4a4e8f82219ff949169f0c6 115 PIRSF PIRSF028299 1 115 1.0E-28 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_B01208 9768846ce4a4e8f82219ff949169f0c6 115 Pfam PF11777 Protein of unknown function (DUF3316) 2 108 9.4E-24 T 12-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 vfu_B00590 ec6e9e5a8cb10bcff5e63540df81f943 376 Gene3D G3DSA:1.10.10.2840 251 376 2.2E-20 T 12-10-2018 vfu_B00590 ec6e9e5a8cb10bcff5e63540df81f943 376 SUPERFAMILY SSF46689 320 351 2.46E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00590 ec6e9e5a8cb10bcff5e63540df81f943 376 Pfam PF05651 Putative sugar diacid recognition 2 135 1.8E-50 T 12-10-2018 IPR008599 Putative sugar diacid recognition vfu_B00590 ec6e9e5a8cb10bcff5e63540df81f943 376 Pfam PF13556 PucR C-terminal helix-turn-helix domain 316 374 3.8E-21 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 465 49.019 T 12-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 Pfam PF00654 Voltage gated chloride channel 88 435 5.5E-94 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 SUPERFAMILY SSF81340 27 451 5.75E-114 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 Gene3D G3DSA:1.10.3080.10 16 459 2.7E-143 T 12-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 PRINTS PR00762 Chloride channel signature 350 370 2.5E-29 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 PRINTS PR00762 Chloride channel signature 181 200 2.5E-29 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 PRINTS PR00762 Chloride channel signature 385 401 2.5E-29 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 PRINTS PR00762 Chloride channel signature 100 117 2.5E-29 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 vfu_B00267 5f42bd37f8824f8bc78223e9af12df25 465 PRINTS PR00762 Chloride channel signature 403 422 2.5E-29 T 12-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 vfu_B01129 10912f7522f6942ae0978fbe53153b98 638 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 505 7.8E-157 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_B01129 10912f7522f6942ae0978fbe53153b98 638 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 53 505 3.4E-146 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_A00208 a69e6fdd8f321831b4b98c4e37ab5f7a 245 Pfam PF11726 Inovirus Gp2 40 220 1.2E-42 T 12-10-2018 vfu_B01288 6a8bb7e412a871c5813a396e73c3dbd5 451 Gene3D G3DSA:3.80.30.20 40 362 9.7E-73 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_B01288 6a8bb7e412a871c5813a396e73c3dbd5 451 SMART SM00729 60 283 1.0E-35 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_B01288 6a8bb7e412a871c5813a396e73c3dbd5 451 SUPERFAMILY SSF102114 59 437 9.68E-79 T 12-10-2018 vfu_B01288 6a8bb7e412a871c5813a396e73c3dbd5 451 Pfam PF04055 Radical SAM superfamily 65 235 2.2E-12 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_B01288 6a8bb7e412a871c5813a396e73c3dbd5 451 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 22 441 2.9E-180 T 12-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW vfu_B01295 44975a414ff53f2ebed082460d83bdd2 204 Pfam PF01810 LysE type translocator 15 202 2.1E-33 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B01216 0ba5f0b22e82dd557fd30a3742dd099b 106 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.727 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 vfu_B01216 0ba5f0b22e82dd557fd30a3742dd099b 106 Gene3D G3DSA:3.30.110.70 2 106 1.4E-43 T 12-10-2018 vfu_B01216 0ba5f0b22e82dd557fd30a3742dd099b 106 Pfam PF01906 Putative heavy-metal-binding 1 105 5.7E-41 T 12-10-2018 IPR002765 Uncharacterised protein family UPF0145 vfu_B01216 0ba5f0b22e82dd557fd30a3742dd099b 106 SUPERFAMILY SSF117782 1 105 9.29E-38 T 12-10-2018 IPR035439 UPF0145 domain superfamily vfu_B00089 06ceaa756dff7c73eacb6561c074b0ff 323 SUPERFAMILY SSF51735 107 290 3.37E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_B00089 06ceaa756dff7c73eacb6561c074b0ff 323 Gene3D G3DSA:3.40.50.720 103 293 1.6E-113 T 12-10-2018 vfu_B00089 06ceaa756dff7c73eacb6561c074b0ff 323 SUPERFAMILY SSF52283 1 139 7.02E-21 T 12-10-2018 vfu_B00089 06ceaa756dff7c73eacb6561c074b0ff 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 320 2.1E-15 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 vfu_B00089 06ceaa756dff7c73eacb6561c074b0ff 323 Gene3D G3DSA:3.40.50.720 3 308 1.6E-113 T 12-10-2018 vfu_B00089 06ceaa756dff7c73eacb6561c074b0ff 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 290 4.7E-48 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 vfu_A00166 5b29e352ad1c7235a6cdb3dcc3e2cfb7 400 Gene3D G3DSA:3.40.960.10 317 400 1.3E-9 T 12-10-2018 vfu_A00166 5b29e352ad1c7235a6cdb3dcc3e2cfb7 400 SUPERFAMILY SSF52980 332 399 8.58E-6 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 vfu_A02761 70bf73f0e312cf69028e0dda2c558a7e 63 Gene3D G3DSA:1.10.1220.10 11 55 2.9E-13 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 vfu_A02761 70bf73f0e312cf69028e0dda2c558a7e 63 SUPERFAMILY SSF47598 2 45 1.0E-13 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 vfu_B01302 c9f458970dcf44928c9e3c417c40d2a6 347 SUPERFAMILY SSF56935 26 320 7.69E-26 T 12-10-2018 vfu_B01302 c9f458970dcf44928c9e3c417c40d2a6 347 Gene3D G3DSA:2.40.160.10 62 347 3.2E-7 T 12-10-2018 IPR023614 Porin domain superfamily vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 5.0E-63 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 12-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 SUPERFAMILY SSF53098 3 156 2.4E-55 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.93 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 4.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 4.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 4.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 4.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 4.5E-42 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.1E-75 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 vfu_A02353 f83cba6fd2c852461e585c35d43f8972 173 Gene3D G3DSA:3.30.420.10 2 159 1.1E-52 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A02343 dffb441278a6239b444152ffeef0eb68 357 SUPERFAMILY SSF74653 263 357 4.9E-14 T 12-10-2018 vfu_A02343 dffb441278a6239b444152ffeef0eb68 357 TIGRFAM TIGR02794 tolA_full: protein TolA 12 356 1.6E-83 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 vfu_A02343 dffb441278a6239b444152ffeef0eb68 357 Gene3D G3DSA:3.30.1150.10 254 357 1.4E-24 T 12-10-2018 vfu_A02343 dffb441278a6239b444152ffeef0eb68 357 Pfam PF06519 TolA C-terminal 254 354 2.9E-29 T 12-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 vfu_A01663 231ffc057db15b63adf2ee2eee7dc88b 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 1.7E-46 T 12-10-2018 IPR014320 Phage shock protein, PspC vfu_A01663 231ffc057db15b63adf2ee2eee7dc88b 129 Pfam PF04024 PspC domain 4 62 1.0E-15 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal vfu_A00804 6bba04b1f2855a68ad40836c1abd79b0 261 Pfam PF04784 Protein of unknown function, DUF547 86 198 3.5E-25 T 12-10-2018 IPR006869 Domain of unknown function DUF547 vfu_A00321 ef1b4862ab12bd879e12e01f93cf6c1d 109 Gene3D G3DSA:1.10.3730.20 5 109 8.3E-29 T 12-10-2018 vfu_A00321 ef1b4862ab12bd879e12e01f93cf6c1d 109 Pfam PF00893 Small Multidrug Resistance protein 6 96 6.6E-22 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 vfu_A00321 ef1b4862ab12bd879e12e01f93cf6c1d 109 SUPERFAMILY SSF103481 8 107 1.06E-17 T 12-10-2018 vfu_A01592 3340f69c5019030903ff9646e9366049 430 Pfam PF00815 Histidinol dehydrogenase 27 424 7.7E-169 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 7.7E-101 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 PIRSF PIRSF000099 1 427 1.4E-166 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.577 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 4.7E-164 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 Gene3D G3DSA:3.40.50.1980 231 346 2.2E-124 T 12-10-2018 vfu_A01592 3340f69c5019030903ff9646e9366049 430 Gene3D G3DSA:3.40.50.1980 30 229 2.2E-124 T 12-10-2018 vfu_A01592 3340f69c5019030903ff9646e9366049 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 vfu_A01592 3340f69c5019030903ff9646e9366049 430 SUPERFAMILY SSF53720 4 424 2.94E-89 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 vfu_B00869 54e38a9a8ce669b4fcec6afb3a24bf6e 57 Pfam PF04219 Protein of unknown function, DUF 3 38 9.1E-8 T 12-10-2018 IPR007335 Protein of unknown function DUF413 vfu_A02326 bb55b7dc627f67e05bd39db37ba29c43 146 Gene3D G3DSA:3.40.50.510 1 137 4.2E-33 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 vfu_A02326 bb55b7dc627f67e05bd39db37ba29c43 146 SUPERFAMILY SSF53062 1 126 9.03E-33 T 12-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 vfu_A02326 bb55b7dc627f67e05bd39db37ba29c43 146 Pfam PF03610 PTS system fructose IIA component 4 114 2.0E-31 T 12-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 vfu_A01919 a1f16ac6d44f9a08793b983eaac00e52 105 Pfam PF12321 Protein of unknown function (DUF3634) 2 103 1.2E-41 T 12-10-2018 IPR022090 Protein of unknown function DUF3634 vfu_A00415 549bf8515b49ada4627b129310de6305 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 24.797 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 vfu_A00415 549bf8515b49ada4627b129310de6305 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.0E-21 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 vfu_A00415 549bf8515b49ada4627b129310de6305 80 Pfam PF02416 mttA/Hcf106 family 4 55 7.5E-14 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 vfu_B00375 e8a0368091e8b99468e55a4b7d7f785b 876 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 205 527 8.9E-116 T 12-10-2018 IPR008766 Replication gene A protein GO:0006260 vfu_A00594 beca8573b45d6d18feb71184009a07e0 435 TIGRFAM TIGR00797 matE: MATE efflux family protein 4 396 8.1E-54 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00594 beca8573b45d6d18feb71184009a07e0 435 PIRSF PIRSF006603 1 431 4.4E-121 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00594 beca8573b45d6d18feb71184009a07e0 435 Pfam PF01554 MatE 227 388 4.7E-20 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00594 beca8573b45d6d18feb71184009a07e0 435 Pfam PF01554 MatE 4 158 1.4E-25 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01452 af4e3f8bfee2a51196590f01faf490c6 105 Gene3D G3DSA:3.10.450.50 1 91 5.0E-8 T 12-10-2018 vfu_B01452 af4e3f8bfee2a51196590f01faf490c6 105 SUPERFAMILY SSF54427 2 85 2.82E-9 T 12-10-2018 IPR032710 NTF2-like domain superfamily vfu_B00156 a94ab74fb0edb5cd50af19f51ec20963 298 Pfam PF02182 SAD/SRA domain 4 146 1.6E-49 T 12-10-2018 IPR003105 SRA-YDG vfu_B00156 a94ab74fb0edb5cd50af19f51ec20963 298 SMART SM00466 1 153 1.1E-66 T 12-10-2018 IPR003105 SRA-YDG vfu_B00156 a94ab74fb0edb5cd50af19f51ec20963 298 Gene3D G3DSA:2.30.280.10 1 150 3.8E-59 T 12-10-2018 IPR036987 SRA-YDG superfamily vfu_B00156 a94ab74fb0edb5cd50af19f51ec20963 298 SUPERFAMILY SSF88697 3 147 2.31E-54 T 12-10-2018 IPR015947 PUA-like superfamily vfu_B00156 a94ab74fb0edb5cd50af19f51ec20963 298 Pfam PF13391 HNH endonuclease 196 250 1.9E-9 T 12-10-2018 IPR003615 HNH nuclease vfu_B00156 a94ab74fb0edb5cd50af19f51ec20963 298 SMART SM00507 184 241 0.0013 T 12-10-2018 IPR003615 HNH nuclease vfu_A02533 97dfe8ecc1a830d2924c69c3b6c0c7f8 159 Gene3D G3DSA:2.10.109.10 42 157 3.3E-19 T 12-10-2018 vfu_A02533 97dfe8ecc1a830d2924c69c3b6c0c7f8 159 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 52 153 3.0E-29 T 12-10-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 vfu_A02362 063c6ab07ba296e0ff325ddf12f386f4 182 Gene3D G3DSA:1.20.1270.340 1 99 7.7E-17 T 12-10-2018 IPR038338 PriB/PriC superfamily vfu_A02362 063c6ab07ba296e0ff325ddf12f386f4 182 Pfam PF07445 Primosomal replication protein priC 5 179 9.6E-55 T 12-10-2018 IPR010890 Primosomal replication PriB/PriC vfu_A02769 215e8e35a21a0d864c4950bc3cdb7a24 74 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 67 2.0E-24 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 vfu_A02769 215e8e35a21a0d864c4950bc3cdb7a24 74 SUPERFAMILY SSF161187 1 69 1.44E-27 T 12-10-2018 vfu_A02769 215e8e35a21a0d864c4950bc3cdb7a24 74 Gene3D G3DSA:2.10.290.10 1 70 2.1E-28 T 12-10-2018 IPR029037 YfgJ-like vfu_A02769 215e8e35a21a0d864c4950bc3cdb7a24 74 Pfam PF07191 zinc-ribbons 4 67 4.0E-28 T 12-10-2018 IPR010807 Protein of unknown function DUF1407 vfu_B00939 23192cfd16fcabd67a6dc1042d974843 299 SUPERFAMILY SSF103481 41 143 2.88E-14 T 12-10-2018 vfu_B00939 23192cfd16fcabd67a6dc1042d974843 299 Pfam PF00892 EamA-like transporter family 8 139 6.5E-13 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00939 23192cfd16fcabd67a6dc1042d974843 299 Pfam PF00892 EamA-like transporter family 145 270 3.1E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00939 23192cfd16fcabd67a6dc1042d974843 299 SUPERFAMILY SSF103481 183 279 4.32E-11 T 12-10-2018 vfu_A01430 a3b574150599b2315c3d8cd6b089fca0 149 Pfam PF13673 Acetyltransferase (GNAT) domain 24 119 6.7E-10 T 12-10-2018 IPR000182 GNAT domain vfu_A01430 a3b574150599b2315c3d8cd6b089fca0 149 Gene3D G3DSA:3.40.630.30 5 149 1.1E-37 T 12-10-2018 vfu_A01430 a3b574150599b2315c3d8cd6b089fca0 149 SUPERFAMILY SSF55729 13 147 9.09E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00306 6295496aa083e1f45631513148fdd431 373 PIRSF PIRSF000345 4 307 9.6E-97 T 12-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 vfu_B00306 6295496aa083e1f45631513148fdd431 373 PRINTS PR00075 Fatty acid desaturase family 1 signature 36 58 9.6E-35 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 vfu_B00306 6295496aa083e1f45631513148fdd431 373 PRINTS PR00075 Fatty acid desaturase family 1 signature 59 79 9.6E-35 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 vfu_B00306 6295496aa083e1f45631513148fdd431 373 PRINTS PR00075 Fatty acid desaturase family 1 signature 156 174 9.6E-35 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 vfu_B00306 6295496aa083e1f45631513148fdd431 373 PRINTS PR00075 Fatty acid desaturase family 1 signature 230 244 9.6E-35 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 vfu_B00306 6295496aa083e1f45631513148fdd431 373 PRINTS PR00075 Fatty acid desaturase family 1 signature 187 208 9.6E-35 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 vfu_B00306 6295496aa083e1f45631513148fdd431 373 PRINTS PR00075 Fatty acid desaturase family 1 signature 97 126 9.6E-35 T 12-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 vfu_B00306 6295496aa083e1f45631513148fdd431 373 Pfam PF00487 Fatty acid desaturase 42 262 4.2E-22 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 vfu_B01170 1ae00e54339324087bf19f1556152fd8 153 Pfam PF01810 LysE type translocator 2 145 9.2E-11 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B00702 179b37f359609c49740297759c2597ca 159 Pfam PF03734 L,D-transpeptidase catalytic domain 23 157 1.1E-18 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 vfu_B00702 179b37f359609c49740297759c2597ca 159 SUPERFAMILY SSF141523 23 157 1.96E-23 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like vfu_B00702 179b37f359609c49740297759c2597ca 159 Gene3D G3DSA:2.40.440.10 19 157 3.4E-16 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like vfu_B01273 4d56598a6c9702adee12efb3d8bcaea3 302 PIRSF PIRSF016660 1 302 1.0E-117 T 12-10-2018 IPR008526 Inner membrane protein YedI vfu_B01273 4d56598a6c9702adee12efb3d8bcaea3 302 Pfam PF05661 Protein of unknown function (DUF808) 4 292 9.8E-113 T 12-10-2018 IPR008526 Inner membrane protein YedI vfu_A00458 67808092b70cf60f56422ecf8c367fa8 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 1.5E-25 T 12-10-2018 IPR019635 Protein of unknown function DUF2500 vfu_A00458 67808092b70cf60f56422ecf8c367fa8 109 Gene3D G3DSA:2.40.50.660 32 108 1.6E-6 T 12-10-2018 vfu_A00706 1fcb49b54009633b970fe43754f94170 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 5.7E-85 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 vfu_A00706 1fcb49b54009633b970fe43754f94170 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 2.5E-104 T 12-10-2018 IPR021254 Protein of unknown function DUF2806 vfu_A00655 6952b97d2f5ef5ef4a7c7799254e737a 366 Gene3D G3DSA:1.20.1530.20 6 364 2.5E-78 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A00655 6952b97d2f5ef5ef4a7c7799254e737a 366 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 16 283 9.0E-82 T 12-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 vfu_A00655 6952b97d2f5ef5ef4a7c7799254e737a 366 Pfam PF00999 Sodium/hydrogen exchanger family 13 362 2.6E-64 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 vfu_B00876 785fcbc49aa3498c9c6ed76837957066 315 SUPERFAMILY SSF51261 46 265 1.52E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_B00876 785fcbc49aa3498c9c6ed76837957066 315 Pfam PF01551 Peptidase family M23 167 262 1.1E-30 T 12-10-2018 IPR016047 Peptidase M23 vfu_B00876 785fcbc49aa3498c9c6ed76837957066 315 Gene3D G3DSA:2.70.70.10 142 263 1.4E-43 T 12-10-2018 IPR011055 Duplicated hybrid motif vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 Gene3D G3DSA:3.30.1330.60 176 294 1.8E-35 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 3 27 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 104 121 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 85 103 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 66 84 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 123 145 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 45 63 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 148 167 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 28 44 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 2.1E-132 T 12-10-2018 vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 Pfam PF00691 OmpA family 191 283 3.3E-18 T 12-10-2018 IPR006665 OmpA-like domain vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 SUPERFAMILY SSF103088 158 288 8.11E-25 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A02594 9f0a66a70a09c267859480291a7058ec 294 Gene3D G3DSA:2.60.40.2540 22 175 4.5E-58 T 12-10-2018 vfu_A01719 e7ed6021716e8e6857fb97469cd3d24a 376 SUPERFAMILY SSF159245 56 376 9.55E-97 T 12-10-2018 vfu_A01719 e7ed6021716e8e6857fb97469cd3d24a 376 Gene3D G3DSA:2.40.370.10 254 376 2.4E-23 T 12-10-2018 IPR023374 AttH-like domain superfamily vfu_A01719 e7ed6021716e8e6857fb97469cd3d24a 376 Gene3D G3DSA:2.40.370.10 67 253 3.6E-53 T 12-10-2018 IPR023374 AttH-like domain superfamily vfu_A01719 e7ed6021716e8e6857fb97469cd3d24a 376 Pfam PF17186 Lipocalin-like domain 253 376 9.1E-33 T 12-10-2018 vfu_A01719 e7ed6021716e8e6857fb97469cd3d24a 376 Pfam PF07143 CrtC N-terminal lipocalin domain 79 250 2.7E-45 T 12-10-2018 IPR010791 AttH domain vfu_A01653 ecc197e89f262fa415d664cc7ade86b7 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 1.9E-36 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 vfu_A02442 471b47a9573824a7f1e0e996f818e72b 259 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 8 251 7.5E-92 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 vfu_A02849 4c6d7d15a79b27a4090ea3b4f10488fe 372 Pfam PF14378 PAP2 superfamily 152 358 7.5E-29 T 12-10-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 vfu_A00428 7b2581c93639a315b8ca19e2f77d35eb 151 Pfam PF10675 Protein of unknown function (DUF2489) 3 135 2.1E-45 T 12-10-2018 IPR019617 Domain of unknown function DUF2489 vfu_B00290 e727c58f7a066150aa1af2f3cb5d8a9f 165 SUPERFAMILY SSF55729 1 152 1.86E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B00290 e727c58f7a066150aa1af2f3cb5d8a9f 165 Pfam PF13673 Acetyltransferase (GNAT) domain 28 138 5.1E-18 T 12-10-2018 IPR000182 GNAT domain vfu_B00290 e727c58f7a066150aa1af2f3cb5d8a9f 165 Gene3D G3DSA:3.40.630.30 1 161 8.2E-42 T 12-10-2018 vfu_B00843 7c97c89a8a636e244b5c1b9423b925dc 207 SUPERFAMILY SSF53474 3 192 2.05E-16 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A02336 369e7df93dac6fe010099e0f1dd54c2d 149 Pfam PF06610 L-alanine exporter 8 142 9.3E-67 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 vfu_A02336 369e7df93dac6fe010099e0f1dd54c2d 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 30.597 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 vfu_A02336 369e7df93dac6fe010099e0f1dd54c2d 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 1.0E-62 T 12-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 vfu_A02133 ae551622ee34b9396d56d64c0893d7aa 258 Gene3D G3DSA:3.30.460.10 58 193 2.5E-5 T 12-10-2018 vfu_A02133 ae551622ee34b9396d56d64c0893d7aa 258 SUPERFAMILY SSF81301 69 220 4.09E-14 T 12-10-2018 vfu_A00869 682ba59cd75621f89b95ca5a1331ea96 289 Pfam PF01478 Type IV leader peptidase family 135 244 2.3E-26 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 vfu_A00869 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 1.5E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial vfu_A00869 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.5E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial vfu_A00869 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.5E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial vfu_A00869 682ba59cd75621f89b95ca5a1331ea96 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.5E-29 T 12-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial vfu_A00869 682ba59cd75621f89b95ca5a1331ea96 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 2.4E-33 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal vfu_B01279 aa8cce23c78fa30a31e1014e61774c45 182 Gene3D G3DSA:3.80.10.10 6 179 8.3E-9 T 12-10-2018 IPR032675 Leucine-rich repeat domain superfamily vfu_B00248 ef4e97b5e1f89a9dba3eaaeb222f6d8d 82 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 5 77 1.9E-28 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 vfu_A03062 1e34de9ed8c58012b7e4d6dc72f3c1ae 324 Gene3D G3DSA:1.10.3470.10 1 323 9.2E-99 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A03062 1e34de9ed8c58012b7e4d6dc72f3c1ae 324 SUPERFAMILY SSF81345 4 315 1.57E-68 T 12-10-2018 IPR037294 ABC transporter, BtuC-like vfu_A03062 1e34de9ed8c58012b7e4d6dc72f3c1ae 324 Pfam PF01032 FecCD transport family 4 315 8.9E-81 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 vfu_B00540 0063a546f0a6bcb700d5876d749d26f2 290 SUPERFAMILY SSF161098 56 281 7.72E-51 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00540 0063a546f0a6bcb700d5876d749d26f2 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 287 4.4E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00540 0063a546f0a6bcb700d5876d749d26f2 290 Gene3D G3DSA:1.10.3720.10 52 288 2.9E-57 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00070 e420c4a4a06aa55027c9d4339b22af02 228 SUPERFAMILY SSF53335 11 99 8.95E-10 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase vfu_B00070 e420c4a4a06aa55027c9d4339b22af02 228 Pfam PF12847 Methyltransferase domain 3 160 4.5E-26 T 12-10-2018 vfu_B00070 e420c4a4a06aa55027c9d4339b22af02 228 Gene3D G3DSA:3.40.50.150 2 166 7.9E-46 T 12-10-2018 vfu_B00070 e420c4a4a06aa55027c9d4339b22af02 228 PIRSF PIRSF028234 1 228 4.1E-93 T 12-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 vfu_A01323 3ab439a9a648b851952f8225e3f0c31f 395 SUPERFAMILY SSF52151 25 264 6.8E-33 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase vfu_A01323 3ab439a9a648b851952f8225e3f0c31f 395 Gene3D G3DSA:3.40.1090.10 16 114 1.1E-8 T 12-10-2018 vfu_A01323 3ab439a9a648b851952f8225e3f0c31f 395 Pfam PF01734 Patatin-like phospholipase 29 198 1.1E-15 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 vfu_A00985 e6cabeb55f521856d7b5100b8617c05c 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 1.0E-21 T 12-10-2018 IPR025299 CstA, C-terminal domain vfu_A00985 e6cabeb55f521856d7b5100b8617c05c 494 Pfam PF02554 Carbon starvation protein CstA 5 144 3.2E-32 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 vfu_A02634 00bc8f9c8af73be750f5762836e7326e 248 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 5.7E-42 T 12-10-2018 vfu_A02634 00bc8f9c8af73be750f5762836e7326e 248 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 29.053 T 12-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 vfu_A01020 7887961a4b44ae1201339128efb42cc7 303 Pfam PF01738 Dienelactone hydrolase family 92 301 3.0E-49 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 vfu_A01020 7887961a4b44ae1201339128efb42cc7 303 Gene3D G3DSA:3.40.50.1820 65 302 5.4E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01020 7887961a4b44ae1201339128efb42cc7 303 SUPERFAMILY SSF53474 76 302 1.58E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold vfu_A01765 574fc066dc0105a8d183c7efa3a88fc1 205 Gene3D G3DSA:2.40.160.20 24 170 2.7E-6 T 12-10-2018 vfu_A01765 574fc066dc0105a8d183c7efa3a88fc1 205 SUPERFAMILY SSF56925 40 172 4.97E-8 T 12-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel vfu_A00118 48b2c2bbd8de821b4114d20b8e3e6ac4 34 SUPERFAMILY SSF51735 1 33 7.75E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A00118 48b2c2bbd8de821b4114d20b8e3e6ac4 34 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 34 1.7E-6 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 vfu_A00118 48b2c2bbd8de821b4114d20b8e3e6ac4 34 Gene3D G3DSA:3.40.50.720 1 34 3.9E-8 T 12-10-2018 vfu_A02511 169ef7add9a0c843e4375a031548abf3 373 Pfam PF10758 Protein of unknown function (DUF2586) 4 364 4.9E-160 T 12-10-2018 IPR019694 Bacteriophage HP1, Orf23 vfu_A01752 24abf552b261e31adc94edf97e1198bf 225 Pfam PF11201 Protein of unknown function (DUF2982) 67 217 1.5E-61 T 12-10-2018 IPR021367 Protein of unknown function DUF2982 vfu_A01176 fd9ac666750e4c12bf951fe9af6c2f30 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 146 6.0E-56 T 12-10-2018 IPR021318 Protein of unknown function DUF2919 vfu_A00195 d3690bf7ccec3fcc03143b1270cf83c0 104 Pfam PF04214 Protein of unknown function, DUF 8 77 3.5E-29 T 12-10-2018 IPR007332 Protein of unknown function DUF411 vfu_A01051 c6ec8bbfd5d892d97c33837ac865adfa 440 PIRSF PIRSF006066 5 440 1.0E-74 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A01051 c6ec8bbfd5d892d97c33837ac865adfa 440 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 428 2.0E-74 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_A01051 c6ec8bbfd5d892d97c33837ac865adfa 440 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 434 5.2E-89 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B00648 1378a6a212cb152eaefc9965a52d528a 467 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 421 1.2E-55 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00648 1378a6a212cb152eaefc9965a52d528a 467 PIRSF PIRSF006603 1 459 1.0E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00648 1378a6a212cb152eaefc9965a52d528a 467 Pfam PF01554 MatE 262 411 1.4E-18 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00648 1378a6a212cb152eaefc9965a52d528a 467 Pfam PF01554 MatE 22 181 9.4E-32 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A02645 b3584d27617f45a529ec4f716c3c3a7a 156 Pfam PF07295 Zinc-ribbon containing domain 14 152 1.4E-48 T 12-10-2018 IPR009912 Zinc-ribbon containing domain vfu_A02350 0966038e6d90980abeb1ca483606f71c 528 PIRSF PIRSF006446 346 526 3.6E-33 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_A02350 0966038e6d90980abeb1ca483606f71c 528 PIRSF PIRSF006446 1 331 1.6E-116 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_A02350 0966038e6d90980abeb1ca483606f71c 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 3.4E-179 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_A00949 42d160ce08a4d50e6e90a6cbc3a30698 337 Pfam PF01136 Peptidase family U32 75 336 5.0E-69 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 vfu_A00949 42d160ce08a4d50e6e90a6cbc3a30698 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 vfu_A00176 81eb01d88455d65eeb8141d1b0811b52 454 Pfam PF02321 Outer membrane efflux protein 258 437 1.3E-19 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A00176 81eb01d88455d65eeb8141d1b0811b52 454 Pfam PF02321 Outer membrane efflux protein 41 222 5.2E-6 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_A00176 81eb01d88455d65eeb8141d1b0811b52 454 SUPERFAMILY SSF56954 7 436 2.35E-46 T 12-10-2018 vfu_A00176 81eb01d88455d65eeb8141d1b0811b52 454 Gene3D G3DSA:1.20.1600.10 32 437 9.0E-39 T 12-10-2018 vfu_A01623 df7b583e5ceb09e9d09c7c912ff0d113 215 Gene3D G3DSA:1.20.120.1820 3 125 9.9E-39 T 12-10-2018 vfu_A01623 df7b583e5ceb09e9d09c7c912ff0d113 215 Gene3D G3DSA:1.20.1280.20 129 214 2.3E-24 T 12-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 vfu_A01623 df7b583e5ceb09e9d09c7c912ff0d113 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 33.547 T 12-10-2018 IPR023069 Chaperone TorD vfu_A01623 df7b583e5ceb09e9d09c7c912ff0d113 215 SUPERFAMILY SSF89155 8 212 5.76E-52 T 12-10-2018 IPR036411 TorD-like superfamily vfu_A01623 df7b583e5ceb09e9d09c7c912ff0d113 215 Pfam PF02613 Nitrate reductase delta subunit 51 182 2.1E-40 T 12-10-2018 IPR020945 DMSO/Nitrate reductase chaperone vfu_A00179 d83425a0dbfcfbe61f29b5a7b38acbce 164 SUPERFAMILY SSF49503 56 163 1.83E-19 T 12-10-2018 IPR008972 Cupredoxin vfu_A00179 d83425a0dbfcfbe61f29b5a7b38acbce 164 Gene3D G3DSA:2.60.40.420 49 164 8.6E-18 T 12-10-2018 IPR008972 Cupredoxin vfu_A00947 ff33f817bc097c4696b89bf6a0c2b5cd 444 Pfam PF01554 MatE 15 176 9.4E-22 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00947 ff33f817bc097c4696b89bf6a0c2b5cd 444 Pfam PF01554 MatE 240 399 3.6E-14 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00947 ff33f817bc097c4696b89bf6a0c2b5cd 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 2.8E-52 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A00947 ff33f817bc097c4696b89bf6a0c2b5cd 444 PIRSF PIRSF006603 1 435 4.1E-68 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_A02513 139213dd5b1630cfec2251b23b8f0fb3 161 Pfam PF06891 P2 phage tail completion protein R (GpR) 9 142 4.1E-28 T 12-10-2018 IPR009678 Bacteriophage tail completion protein R vfu_B00341 d39217f7bac3d5413702973c01007f64 410 Pfam PF02321 Outer membrane efflux protein 2 186 1.1E-23 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_B00341 d39217f7bac3d5413702973c01007f64 410 Pfam PF02321 Outer membrane efflux protein 207 390 1.2E-31 T 12-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 vfu_B00341 d39217f7bac3d5413702973c01007f64 410 SUPERFAMILY SSF56954 2 405 1.23E-84 T 12-10-2018 vfu_B00341 d39217f7bac3d5413702973c01007f64 410 Gene3D G3DSA:1.20.1600.10 1 402 2.0E-81 T 12-10-2018 vfu_B00341 d39217f7bac3d5413702973c01007f64 410 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 1 404 5.7E-125 T 12-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 vfu_B01052 5d10f38ed85c26b6906caefa19943857 94 SUPERFAMILY SSF55729 4 90 1.45E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase vfu_B01052 5d10f38ed85c26b6906caefa19943857 94 Gene3D G3DSA:3.40.630.30 1 94 5.1E-23 T 12-10-2018 vfu_B01052 5d10f38ed85c26b6906caefa19943857 94 Pfam PF14542 GCN5-related N-acetyl-transferase 14 90 2.3E-23 T 12-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase vfu_A02434 4f40b522d98ee0ac75677051e2c6f1ac 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 1.3E-115 T 12-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit vfu_A02434 4f40b522d98ee0ac75677051e2c6f1ac 453 PIRSF PIRSF006066 1 269 1.0E-90 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A02434 4f40b522d98ee0ac75677051e2c6f1ac 453 PIRSF PIRSF006066 271 447 4.0E-49 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_A02434 4f40b522d98ee0ac75677051e2c6f1ac 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 4.4E-85 T 12-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 vfu_B00402 f219abcaac7aee0219d2288fcf7dfa4d 121 Pfam PF10618 Phage tail tube protein 3 118 9.9E-36 T 12-10-2018 IPR019596 Bacteriophage Mu, GpM, tail tube vfu_A02514 18d0750f21e9034b52dd8f0f5d85a904 139 Pfam PF05926 Phage head completion protein (GPL) 20 62 4.6E-5 T 12-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 vfu_A02514 18d0750f21e9034b52dd8f0f5d85a904 139 Pfam PF05926 Phage head completion protein (GPL) 74 136 3.1E-12 T 12-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 vfu_A02349 81cb0a66349eba7a80a266906c73a5a4 378 PIRSF PIRSF000267 2 377 1.8E-125 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_A02349 81cb0a66349eba7a80a266906c73a5a4 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 2.2E-172 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_A02349 81cb0a66349eba7a80a266906c73a5a4 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.1E-107 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 Pfam PF00696 Amino acid kinase family 5 280 2.2E-29 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 Gene3D G3DSA:3.40.1160.10 1 303 2.4E-114 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 SUPERFAMILY SSF53633 4 300 2.23E-78 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PIRSF PIRSF000723 2 302 5.1E-114 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 153 172 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 257 272 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 105 124 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 PRINTS PR01469 Bacterial carbamate kinase signature 176 194 1.3E-61 T 12-10-2018 vfu_A00562 4964b3d1f23223a99aa6e28ce1d41398 304 TIGRFAM TIGR00746 arcC: carbamate kinase 5 301 8.1E-121 T 12-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 vfu_A01580 004a18c8fdbab5bfb50779f59ef33ba8 180 Pfam PF11086 Protein of unknown function (DUF2878) 5 150 1.6E-28 T 12-10-2018 IPR021306 Protein of unknown function DUF2878 vfu_A02066 1ec909165b1d4210360511c6442f6d38 231 SUPERFAMILY SSF53850 4 230 1.78E-31 T 12-10-2018 vfu_A02066 1ec909165b1d4210360511c6442f6d38 231 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 214 7.8E-20 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF vfu_A02066 1ec909165b1d4210360511c6442f6d38 231 Gene3D G3DSA:3.40.190.10 89 185 3.1E-25 T 12-10-2018 vfu_A02066 1ec909165b1d4210360511c6442f6d38 231 Gene3D G3DSA:3.40.190.10 9 215 3.1E-25 T 12-10-2018 vfu_A01863 af91609118451a5bae117d5ea667441b 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 649 1.4E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01863 af91609118451a5bae117d5ea667441b 685 SUPERFAMILY SSF58104 375 683 4.19E-58 T 12-10-2018 vfu_A01863 af91609118451a5bae117d5ea667441b 685 Gene3D G3DSA:1.10.287.950 356 685 9.6E-58 T 12-10-2018 vfu_A01863 af91609118451a5bae117d5ea667441b 685 SMART SM00283 422 683 3.8E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 vfu_A01954 e3c5bef0ebec2675a8ca6d567a050c69 252 Pfam PF11153 Protein of unknown function (DUF2931) 5 229 1.1E-50 T 12-10-2018 IPR021326 Protein of unknown function DUF2931 vfu_A01631 498b740b21ad44728937628b63d6848a 302 SUPERFAMILY SSF56059 30 264 5.69E-21 T 12-10-2018 vfu_A01631 498b740b21ad44728937628b63d6848a 302 Pfam PF14397 Sugar-transfer associated ATP-grasp 6 278 4.6E-115 T 12-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 vfu_A01631 498b740b21ad44728937628b63d6848a 302 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 1 301 1.1E-163 T 12-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein vfu_A02900 6bde014ba6ddf53eb23198ca2cf4b30f 72 Pfam PF11697 Protein of unknown function (DUF3293) 2 43 7.1E-8 T 12-10-2018 IPR021710 Protein of unknown function DUF3293 vfu_A00205 151b72e90e9ce769cb6277e02529c4ab 146 Pfam PF00075 RNase H 3 144 1.2E-33 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 vfu_A00205 151b72e90e9ce769cb6277e02529c4ab 146 SUPERFAMILY SSF53098 3 144 8.98E-39 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00205 151b72e90e9ce769cb6277e02529c4ab 146 Gene3D G3DSA:3.30.420.10 1 146 1.3E-44 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A01038 479887c1b30ce488ac36aed3cd831072 267 Pfam PF11101 Protein of unknown function (DUF2884) 42 265 2.5E-69 T 12-10-2018 IPR021307 Protein of unknown function DUF2884 vfu_A03047 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Gene3D G3DSA:3.40.1740.10 1 187 9.4E-71 T 12-10-2018 vfu_A03047 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.08 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 vfu_A03047 7e38d8726b9181cb1cc5b5bd1049bd5f 187 SUPERFAMILY SSF143456 1 187 1.7E-67 T 12-10-2018 vfu_A03047 7e38d8726b9181cb1cc5b5bd1049bd5f 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 2.4E-51 T 12-10-2018 IPR003774 Protein of unknown function UPF0301 vfu_A00147 110d0acd2fb24a052017f01161e93c47 346 Gene3D G3DSA:3.40.50.2000 22 338 8.6E-55 T 12-10-2018 vfu_A00147 110d0acd2fb24a052017f01161e93c47 346 Pfam PF00534 Glycosyl transferases group 1 164 314 9.5E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 vfu_A00147 110d0acd2fb24a052017f01161e93c47 346 SUPERFAMILY SSF53756 2 341 9.42E-63 T 12-10-2018 vfu_A00147 110d0acd2fb24a052017f01161e93c47 346 Pfam PF13439 Glycosyltransferase Family 4 13 147 4.8E-8 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 vfu_A00147 110d0acd2fb24a052017f01161e93c47 346 Gene3D G3DSA:3.40.50.2000 150 325 8.6E-55 T 12-10-2018 vfu_A01273 10d8702f3e74afa66c5abdf7d766e501 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 7.9E-66 T 12-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) vfu_B00052 f5876114f45f1c12a9bea968155237c2 46 Pfam PF14026 Protein of unknown function (DUF4242) 1 35 3.0E-9 T 12-10-2018 IPR025336 Protein of unknown function DUF4242 vfu_A03004 eb718d4b9441143397746b9b01b0034d 190 Gene3D G3DSA:1.10.260.40 38 182 1.3E-7 T 12-10-2018 vfu_A03004 eb718d4b9441143397746b9b01b0034d 190 Pfam PF01381 Helix-turn-helix 41 87 2.8E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 vfu_A03004 eb718d4b9441143397746b9b01b0034d 190 SUPERFAMILY SSF47413 40 94 3.1E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 vfu_B00260 e3f2a895c3abea32307aea35872c147c 465 Pfam PF00939 Sodium:sulfate symporter transmembrane region 11 464 1.9E-26 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.025 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-72 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.9E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 Gene3D G3DSA:1.10.455.10 2 155 6.1E-65 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 PIRSF PIRSF002122 3 156 1.4E-63 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 vfu_A00002 7a4ce7c035fd680e13be3ee71c54c1ad 156 SUPERFAMILY SSF47973 6 149 2.88E-60 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily vfu_A01415 ed163a060b41862542b0fb6231dc7ff8 120 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 8 112 1.1E-44 T 12-10-2018 IPR039366 YscW/ExsB vfu_B01156 bc4a888cde6e3dfd9df47906e5973d11 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 291 2.2E-9 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B01156 bc4a888cde6e3dfd9df47906e5973d11 300 SUPERFAMILY SSF161098 28 297 1.28E-40 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01156 bc4a888cde6e3dfd9df47906e5973d11 300 Gene3D G3DSA:1.10.3720.10 28 289 2.4E-35 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B01292 aa5661bc038edf277f67730e8bf13205 419 Pfam PF13520 Amino acid permease 9 371 1.0E-27 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B01292 aa5661bc038edf277f67730e8bf13205 419 PIRSF PIRSF006060 1 413 6.3E-53 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 vfu_B01292 aa5661bc038edf277f67730e8bf13205 419 Gene3D G3DSA:1.20.1740.10 3 414 2.1E-57 T 12-10-2018 vfu_A02531 025eefdead4f6e39210ed4c6efff171a 179 Pfam PF06892 Phage regulatory protein CII (CP76) 11 169 5.3E-61 T 12-10-2018 IPR009679 Bacteriophage 186, CII vfu_A02079 9cd3c156ae7a2a4e78f37653c56b5b29 167 Gene3D G3DSA:3.30.2010.10 73 164 8.1E-7 T 12-10-2018 vfu_A02079 9cd3c156ae7a2a4e78f37653c56b5b29 167 Pfam PF01863 Protein of unknown function DUF45 97 150 3.9E-11 T 12-10-2018 IPR002725 Protein of unknown function DUF45 vfu_B00197 90bf506a79db9cf615576521aee66aa1 295 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 1 294 1.9E-116 T 12-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain vfu_A03096 1dee9b22822326b2d3c89c4b4c333ee0 1293 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1281 0.0 T 12-10-2018 IPR011836 Conserved hypothetical protein CHP02099 vfu_A03096 1dee9b22822326b2d3c89c4b4c333ee0 1293 Pfam PF13502 AsmA-like C-terminal region 1031 1271 8.3E-56 T 12-10-2018 IPR032712 AsmA-like, C-terminal vfu_A03096 1dee9b22822326b2d3c89c4b4c333ee0 1293 Pfam PF13116 Protein of unknown function 505 791 4.6E-95 T 12-10-2018 IPR025263 Domain of unknown function DUF3971 vfu_A00657 f0cddf091936c39ebda2e99566d355a8 71 Pfam PF09526 Probable metal-binding protein (DUF2387) 9 54 1.1E-19 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 vfu_A00657 f0cddf091936c39ebda2e99566d355a8 71 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 7 65 1.0E-31 T 12-10-2018 IPR012658 Conserved hypothetical protein CHP02443 vfu_A01896 31fd0ce88c6ed9eecb9cfc471bf5e495 234 Gene3D G3DSA:1.10.530.10 90 231 8.9E-15 T 12-10-2018 vfu_A01896 31fd0ce88c6ed9eecb9cfc471bf5e495 234 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 96 229 5.4E-17 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 vfu_B00645 938336321735881adc3396ed72b307f4 255 Pfam PF03741 Integral membrane protein TerC family 16 203 7.0E-41 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 vfu_A01577 04bea8564c82cec0fb84d970dd2e1d04 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 326 6.2E-23 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 vfu_A01577 04bea8564c82cec0fb84d970dd2e1d04 425 SUPERFAMILY SSF51905 1 412 1.81E-50 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_A01577 04bea8564c82cec0fb84d970dd2e1d04 425 Gene3D G3DSA:3.50.50.60 1 316 5.4E-25 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00146 783b93cf912e036fbf7e20b963f65fdf 538 SMART SM00990 424 536 1.0E-20 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 vfu_B00146 783b93cf912e036fbf7e20b963f65fdf 538 Gene3D G3DSA:3.40.1350.10 474 537 3.8E-10 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 vfu_B00146 783b93cf912e036fbf7e20b963f65fdf 538 Pfam PF08774 VRR-NUC domain 433 535 3.3E-24 T 12-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 vfu_A01888 59352b7ab4c75db45448f4363b9ec380 406 Gene3D G3DSA:1.10.3430.10 2 406 2.8E-102 T 12-10-2018 IPR029020 Ammonium/urea transporter vfu_A01888 59352b7ab4c75db45448f4363b9ec380 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 vfu_A01888 59352b7ab4c75db45448f4363b9ec380 406 Pfam PF00909 Ammonium Transporter Family 23 399 5.3E-88 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 vfu_A01888 59352b7ab4c75db45448f4363b9ec380 406 SUPERFAMILY SSF111352 17 384 2.22E-96 T 12-10-2018 vfu_B01204 9f0f685e649656eb3f227d44ed2d5384 351 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 27 343 7.0E-63 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 vfu_B01204 9f0f685e649656eb3f227d44ed2d5384 351 SUPERFAMILY SSF51695 21 348 3.66E-90 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 vfu_B01204 9f0f685e649656eb3f227d44ed2d5384 351 Gene3D G3DSA:3.20.20.190 20 349 9.7E-123 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 vfu_A00986 495cdcda2f630f20e33d36dfa566de8f 154 Pfam PF10973 Protein of unknown function (DUF2799) 69 149 3.8E-21 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 vfu_A01201 a4074640349b0f14c7b1da0cc9d55dc1 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 8.0E-27 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01201 a4074640349b0f14c7b1da0cc9d55dc1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.9E-16 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01201 a4074640349b0f14c7b1da0cc9d55dc1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.9E-16 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01201 a4074640349b0f14c7b1da0cc9d55dc1 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.9E-16 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01201 a4074640349b0f14c7b1da0cc9d55dc1 89 PIRSF PIRSF004669 1 89 9.9E-29 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 vfu_A01201 a4074640349b0f14c7b1da0cc9d55dc1 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.5E-31 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 vfu_A02375 10b64676b9ef2d17d5eb97c89e9f5680 265 Gene3D G3DSA:2.40.128.140 3 263 8.3E-52 T 12-10-2018 IPR037107 Putative outer membrane protein superfamily vfu_A02375 10b64676b9ef2d17d5eb97c89e9f5680 265 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 7 261 1.3E-72 T 12-10-2018 IPR018707 Protein of unknown function DUF2219 vfu_B00079 765bedda684fef173dfaded6ba0ff6e3 209 PIRSF PIRSF006324 1 208 3.4E-62 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B00079 765bedda684fef173dfaded6ba0ff6e3 209 Pfam PF01810 LysE type translocator 15 203 4.2E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A01199 2037b9931a36b12238f63403c76155e9 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 1.5E-18 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 vfu_A01199 2037b9931a36b12238f63403c76155e9 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 1.6E-22 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 vfu_B00293 2b5c086306ff7525147757196c70a40c 203 Pfam PF01810 LysE type translocator 13 202 8.6E-35 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B00293 2b5c086306ff7525147757196c70a40c 203 PIRSF PIRSF006324 1 203 5.2E-52 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_B00720 79d439edcaf8d29ad9ed088a68620cb5 96 Pfam PF04320 Protein with unknown function (DUF469) 1 94 1.5E-28 T 12-10-2018 IPR007416 Protein of unknown function DUF469 vfu_A00181 dc3d410e984df896efaf8e6913557951 306 Pfam PF13737 Transposase DDE domain 19 129 9.9E-45 T 12-10-2018 IPR025668 Transposase DDE domain vfu_A01906 99e9e08a04cf0ef2108103e46769f44a 45 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 33 6.7E-12 T 12-10-2018 IPR008621 Cbb3-type cytochrome oxidase component vfu_A01211 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 Pfam PF03358 NADPH-dependent FMN reductase 1 133 5.4E-26 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 vfu_A01211 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 Gene3D G3DSA:3.40.50.360 1 174 4.4E-32 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A01211 99f8d3ef6b9fa5aeeb5343a01ed20e0e 174 SUPERFAMILY SSF52218 1 173 3.71E-35 T 12-10-2018 IPR029039 Flavoprotein-like superfamily vfu_A02402 5bed357e066481cd6cce0dfb506cb6c9 130 Gene3D G3DSA:2.60.40.3230 19 129 1.7E-30 T 12-10-2018 IPR038483 YcfL-like superfamily vfu_A02402 5bed357e066481cd6cce0dfb506cb6c9 130 Pfam PF07233 Protein of unknown function (DUF1425) 36 126 6.1E-31 T 12-10-2018 IPR010824 Protein of unknown function DUF1425 vfu_B01168 6bda5e75aecd9946b1cbdf1fc7b82988 322 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 41 318 6.1E-61 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 vfu_B01168 6bda5e75aecd9946b1cbdf1fc7b82988 322 SUPERFAMILY SSF161111 38 250 4.32E-49 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily vfu_B01168 6bda5e75aecd9946b1cbdf1fc7b82988 322 Gene3D G3DSA:1.20.1510.10 41 249 4.1E-32 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily vfu_B01168 6bda5e75aecd9946b1cbdf1fc7b82988 322 Pfam PF01545 Cation efflux family 46 249 7.0E-36 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 vfu_B00123 7312fd9a78b2a157603e97516e285821 259 Gene3D G3DSA:2.40.30.10 3 123 1.9E-29 T 12-10-2018 vfu_B00123 7312fd9a78b2a157603e97516e285821 259 SUPERFAMILY SSF63380 7 121 2.33E-10 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel vfu_B00123 7312fd9a78b2a157603e97516e285821 259 Gene3D G3DSA:3.40.50.80 125 259 4.4E-46 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain vfu_B00123 7312fd9a78b2a157603e97516e285821 259 Pfam PF08021 Siderophore-interacting FAD-binding domain 15 123 1.6E-27 T 12-10-2018 IPR013113 FAD-binding 9, siderophore-interacting vfu_B00123 7312fd9a78b2a157603e97516e285821 259 Pfam PF04954 Siderophore-interacting protein 130 241 1.1E-30 T 12-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain vfu_A00099 ecb0f37e05653f39f6a22b4274a2040e 428 Pfam PF05159 Capsule polysaccharide biosynthesis protein 114 403 9.8E-26 T 12-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 vfu_A00091 e037cf21d7a12e47f37c5154128d54e7 324 Pfam PF02169 LPP20 lipoprotein 26 125 2.8E-20 T 12-10-2018 IPR024952 Lipoprotein LPP20-like vfu_A00091 e037cf21d7a12e47f37c5154128d54e7 324 Gene3D G3DSA:3.10.28.20 24 126 7.1E-14 T 12-10-2018 vfu_B00545 dff931375ae272ad57b6edf61d1c53e3 201 ProSitePatterns PS00211 ABC transporters family signature. 89 103 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 vfu_B00545 dff931375ae272ad57b6edf61d1c53e3 201 Gene3D G3DSA:3.40.50.300 1 191 1.5E-39 T 12-10-2018 vfu_B00545 dff931375ae272ad57b6edf61d1c53e3 201 Pfam PF00005 ABC transporter 21 116 9.5E-15 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 vfu_B00545 dff931375ae272ad57b6edf61d1c53e3 201 SUPERFAMILY SSF52540 12 167 5.93E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A01834 27f481da3c235d0152342e81a12e4cb4 162 SUPERFAMILY SSF51197 21 158 1.46E-34 T 12-10-2018 vfu_A01834 27f481da3c235d0152342e81a12e4cb4 162 Pfam PF04074 Domain of unknown function (DUF386) 3 156 1.8E-36 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family vfu_A01834 27f481da3c235d0152342e81a12e4cb4 162 Gene3D G3DSA:2.60.120.370 8 160 1.6E-34 T 12-10-2018 IPR037012 YhcH/YjgK/YiaL superfamily vfu_A01834 27f481da3c235d0152342e81a12e4cb4 162 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 2 158 2.3E-34 T 12-10-2018 IPR004375 YhcH/YjgK/YiaL family vfu_A01462 4108c0eea5c4f1a126b31ba23a73abec 141 Pfam PF07681 DoxX 19 98 3.8E-19 T 12-10-2018 IPR032808 DoxX family vfu_B01502 7b4ff6c3ca3e4e5c6a6d42f163826362 294 Pfam PF00491 Arginase family 60 220 1.7E-19 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 vfu_B01502 7b4ff6c3ca3e4e5c6a6d42f163826362 294 Gene3D G3DSA:3.40.800.10 29 289 2.5E-30 T 12-10-2018 vfu_B01502 7b4ff6c3ca3e4e5c6a6d42f163826362 294 SUPERFAMILY SSF52768 6 277 8.82E-40 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily vfu_B01193 ea33efb88652068be2d659a0f66c4fc4 88 Pfam PF11216 Protein of unknown function (DUF3012) 57 88 2.1E-20 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 vfu_B01193 ea33efb88652068be2d659a0f66c4fc4 88 Pfam PF11216 Protein of unknown function (DUF3012) 22 53 5.1E-19 T 12-10-2018 IPR021379 Protein of unknown function DUF3012 vfu_B00405 0765a6e6c61fea57f93d4452744d9533 35 Pfam PF06528 Phage P2 GpE 2 31 5.8E-7 T 12-10-2018 IPR009493 Burkholderia phage phiE202, Gp27 vfu_A00087 d035347f8fd039d61c6dda09b050a16e 414 SUPERFAMILY SSF50182 187 252 3.92E-11 T 12-10-2018 IPR010920 LSM domain superfamily vfu_A00087 d035347f8fd039d61c6dda09b050a16e 414 Pfam PF00924 Mechanosensitive ion channel 144 397 8.2E-49 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_B00916 cd5ccd472b48db9ca3899062af4da436 90 Gene3D G3DSA:2.160.20.80 1 89 3.5E-19 T 12-10-2018 vfu_B00916 cd5ccd472b48db9ca3899062af4da436 90 Pfam PF00805 Pentapeptide repeats (8 copies) 44 70 0.0045 T 12-10-2018 IPR001646 Pentapeptide repeat vfu_B00916 cd5ccd472b48db9ca3899062af4da436 90 Pfam PF00805 Pentapeptide repeats (8 copies) 6 37 0.0023 T 12-10-2018 IPR001646 Pentapeptide repeat vfu_B00916 cd5ccd472b48db9ca3899062af4da436 90 SUPERFAMILY SSF141571 2 88 3.01E-17 T 12-10-2018 vfu_A01396 13abc77b93851530361f29085352f4b7 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 15 254 1.4E-57 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 vfu_A01396 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 2.2E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01396 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.2E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01396 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.2E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01396 13abc77b93851530361f29085352f4b7 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.2E-23 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01396 13abc77b93851530361f29085352f4b7 258 Pfam PF01311 Bacterial export proteins, family 1 14 243 1.6E-60 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01269 680ede8e65f9bd5267391a7efa653744 161 Pfam PF03918 Cytochrome C biogenesis protein 9 151 5.8E-56 T 12-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family vfu_A01269 680ede8e65f9bd5267391a7efa653744 161 Gene3D G3DSA:1.10.8.640 20 105 2.3E-37 T 12-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily vfu_B00762 73a4a6e87cbf2787d30716bcc4b8b4ef 298 SUPERFAMILY SSF103481 42 123 7.32E-7 T 12-10-2018 vfu_B00762 73a4a6e87cbf2787d30716bcc4b8b4ef 298 SUPERFAMILY SSF103481 174 271 9.55E-5 T 12-10-2018 vfu_B00762 73a4a6e87cbf2787d30716bcc4b8b4ef 298 Pfam PF00892 EamA-like transporter family 3 125 6.4E-14 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B00762 73a4a6e87cbf2787d30716bcc4b8b4ef 298 Pfam PF00892 EamA-like transporter family 140 274 5.2E-9 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 vfu_B01042 de432ba734fa68804740b2ea9222611d 280 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 66 198 2.9E-43 T 12-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 vfu_A01646 8e3608832a1c9b3aa98bc862b405db3e 58 Pfam PF06796 Periplasmic nitrate reductase protein NapE 8 55 1.3E-25 T 12-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE vfu_A01646 8e3608832a1c9b3aa98bc862b405db3e 58 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 10 57 3.3E-30 T 12-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE vfu_A00407 8e8cfd85d66af634e655915b691c6f9f 276 Pfam PF08668 HDOD domain 13 206 2.6E-48 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD vfu_A00407 8e8cfd85d66af634e655915b691c6f9f 276 SUPERFAMILY SSF109604 5 250 8.17E-55 T 12-10-2018 vfu_A00407 8e8cfd85d66af634e655915b691c6f9f 276 Gene3D G3DSA:1.10.3210.10 1 275 7.7E-63 T 12-10-2018 vfu_A00431 496ded88eff8dfa1af8c1ba0e3daed01 412 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 68 396 3.2E-110 T 12-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX vfu_A00336 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 SUPERFAMILY SSF46894 18 93 5.67E-10 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A00336 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 SMART SM00862 27 100 3.9E-7 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00336 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 94 1.6E-8 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A00336 2b5bfacba40bc5fe391cbe56e6ac0cfd 265 Gene3D G3DSA:1.10.10.10 3 103 4.3E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02710 5a2386b4dddf783792965dfaa2e2326e 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 3.1E-20 T 12-10-2018 IPR025346 Protein of unknown function DUF4250 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 69 102 33.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 139 172 0.32 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 103 136 61.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 SMART SM00028 35 68 0.13 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 Pfam PF13432 Tetratricopeptide repeat 40 101 0.004 T 12-10-2018 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 7 235 3.6E-73 T 12-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 Gene3D G3DSA:1.25.40.10 32 239 1.9E-35 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 Pfam PF13424 Tetratricopeptide repeat 104 169 1.9E-7 T 12-10-2018 vfu_A02076 b7385c3038b8d9a66b681cdc00a7db4b 239 SUPERFAMILY SSF48452 28 201 1.52E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00628 8dfc0bef7fbf1489298ea1eccfcf07eb 191 SUPERFAMILY SSF50182 101 166 2.62E-7 T 12-10-2018 IPR010920 LSM domain superfamily vfu_B00628 8dfc0bef7fbf1489298ea1eccfcf07eb 191 Pfam PF00924 Mechanosensitive ion channel 60 171 2.3E-8 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 vfu_A00764 a1e97e8b997817895b14eed2051bf0d7 157 Pfam PF06271 RDD family 8 147 3.5E-22 T 12-10-2018 IPR010432 RDD vfu_A00444 4ba89d9a8db6e74391c7aff9d52b6b75 181 SMART SM01144 1 174 4.8E-46 T 12-10-2018 IPR005636 DTW vfu_A00444 4ba89d9a8db6e74391c7aff9d52b6b75 181 Pfam PF03942 DTW domain 6 166 1.3E-42 T 12-10-2018 IPR005636 DTW vfu_A01416 ce6f380d35de4e6fbc99ed31f443ea9a 100 SUPERFAMILY SSF46767 2 84 6.8E-25 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 vfu_A01416 ce6f380d35de4e6fbc99ed31f443ea9a 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.1E-22 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 vfu_A01416 ce6f380d35de4e6fbc99ed31f443ea9a 100 Gene3D G3DSA:1.10.10.10 1 100 9.2E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A00462 29272d66d245c689fe3645cbbcb4a502 209 Pfam PF07947 YhhN family 27 205 1.2E-31 T 12-10-2018 IPR012506 YhhN-like GO:0016021 vfu_A01292 ee7643cf1fa14b78fee64633bb3df3a6 479 Pfam PF03553 Na+/H+ antiporter family 161 453 3.6E-66 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 vfu_A01292 ee7643cf1fa14b78fee64633bb3df3a6 479 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.4E-160 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 vfu_A01194 b50bb68ea2f04512084aedce991f2283 150 PIRSF PIRSF019404 1 146 2.5E-29 T 12-10-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 vfu_A01194 b50bb68ea2f04512084aedce991f2283 150 Pfam PF02050 Flagellar FliJ protein 17 140 1.7E-30 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 vfu_A01194 b50bb68ea2f04512084aedce991f2283 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 4.4E-34 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 vfu_B00307 d750b3c1dceed2d1c03b754be047f3e1 447 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 48 433 5.4E-143 T 12-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 vfu_B00307 d750b3c1dceed2d1c03b754be047f3e1 447 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 443 2.5E-127 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 vfu_A01028 0c14803b9e5d55d4e783398e9dee051e 428 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 428 6.7E-199 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 vfu_A01028 0c14803b9e5d55d4e783398e9dee051e 428 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 428 43.133 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 vfu_A01028 0c14803b9e5d55d4e783398e9dee051e 428 Pfam PF11973 NQRA C-terminal domain 243 292 3.3E-21 T 12-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 vfu_A01028 0c14803b9e5d55d4e783398e9dee051e 428 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 2 238 1.1E-103 T 12-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 vfu_A00566 3609759bd55ef993cbc3b325ca36492f 435 PIRSF PIRSF004539 1 435 5.9E-178 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 vfu_A00566 3609759bd55ef993cbc3b325ca36492f 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.6E-178 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 vfu_A00566 3609759bd55ef993cbc3b325ca36492f 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 5.7E-145 T 12-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 vfu_B01237 0421da3f85a8944f3384cfcd6401a443 380 Pfam PF07470 Glycosyl Hydrolase Family 88 38 378 3.5E-97 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 vfu_B01237 0421da3f85a8944f3384cfcd6401a443 380 Gene3D G3DSA:1.50.10.10 1 380 2.2E-152 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 vfu_B01237 0421da3f85a8944f3384cfcd6401a443 380 SUPERFAMILY SSF48208 25 378 1.03E-85 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 vfu_B00760 14d1b64a5f9044a34f83f2e3eea75546 126 Pfam PF04237 YjbR 17 103 1.6E-23 T 12-10-2018 IPR007351 Uncharacterised protein YjbR vfu_B00760 14d1b64a5f9044a34f83f2e3eea75546 126 SUPERFAMILY SSF142906 1 116 1.02E-36 T 12-10-2018 IPR038056 YjbR-like superfamily vfu_B00760 14d1b64a5f9044a34f83f2e3eea75546 126 Gene3D G3DSA:3.90.1150.30 1 125 2.5E-41 T 12-10-2018 IPR038056 YjbR-like superfamily vfu_A01228 19f01b8ace5862da9ab85d5a482e9464 256 Gene3D G3DSA:3.40.1390.30 101 227 3.0E-83 T 12-10-2018 vfu_A01228 19f01b8ace5862da9ab85d5a482e9464 256 SUPERFAMILY SSF102705 5 255 1.96E-82 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily vfu_A01228 19f01b8ace5862da9ab85d5a482e9464 256 Gene3D G3DSA:3.40.1390.30 18 241 3.0E-83 T 12-10-2018 vfu_A01228 19f01b8ace5862da9ab85d5a482e9464 256 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 255 3.2E-69 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 vfu_A01228 19f01b8ace5862da9ab85d5a482e9464 256 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 12 242 8.5E-61 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 3.2E-94 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 5.0E-71 T 12-10-2018 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 5.0E-71 T 12-10-2018 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 5.0E-71 T 12-10-2018 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 5.0E-71 T 12-10-2018 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 5.0E-71 T 12-10-2018 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 5.0E-71 T 12-10-2018 vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 PIRSF PIRSF002764 1 222 3.0E-85 T 12-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria vfu_A01263 e7449dd9473bbe5be28c58889335ce54 222 Pfam PF03379 CcmB protein 5 219 1.1E-91 T 12-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 vfu_A02380 4742ffddb66e22e42fda51a2a87c118f 251 Pfam PF06629 MltA-interacting protein MipA 30 251 2.6E-45 T 12-10-2018 IPR010583 MltA-interacting MipA vfu_B01162 f464d799dd2f36e310cfd6f7aaa69c66 579 Pfam PF01740 STAS domain 438 527 1.0E-13 T 12-10-2018 IPR002645 STAS domain vfu_B01162 f464d799dd2f36e310cfd6f7aaa69c66 579 SUPERFAMILY SSF52091 437 527 4.32E-11 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B01162 f464d799dd2f36e310cfd6f7aaa69c66 579 Gene3D G3DSA:3.30.750.24 427 537 2.6E-19 T 12-10-2018 IPR036513 STAS domain superfamily vfu_B01162 f464d799dd2f36e310cfd6f7aaa69c66 579 Pfam PF00916 Sulfate permease family 16 374 2.7E-84 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 vfu_A01202 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 5.3E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01202 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 5.3E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01202 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 5.3E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01202 3080248c9beb1ff1b841a05c05e6d310 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 5.3E-16 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_A01202 3080248c9beb1ff1b841a05c05e6d310 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 2.0E-75 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 vfu_A01202 3080248c9beb1ff1b841a05c05e6d310 260 Pfam PF01311 Bacterial export proteins, family 1 13 245 9.3E-58 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 vfu_B00969 a769ded9a501ff2fbff07b3d2db359ee 367 Gene3D G3DSA:2.60.40.1120 290 364 4.0E-5 T 12-10-2018 vfu_B00969 a769ded9a501ff2fbff07b3d2db359ee 367 Pfam PF08308 PEGA domain 298 362 4.5E-23 T 12-10-2018 IPR013229 PEGA vfu_A00521 a49674515857625ddb66e831db014ea7 252 Pfam PF01203 Type II secretion system (T2SS), protein N 36 246 3.7E-55 T 12-10-2018 IPR022792 Type II secretion system, protein N vfu_B01197 ca2b1ef5b103b5d67b676308acc69044 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 319 7.7E-52 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_A02889 3aa67a3e6bc2aa3fd093b379cb457213 59 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 1.2E-23 T 12-10-2018 IPR021932 Protein of unknown function DUF3545 vfu_B00991 d156ed6f8e60f9affbfb42a3194efb6e 658 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 8.3E-142 T 12-10-2018 IPR021781 Protein of unknown function DUF3346 vfu_A02841 90e96e3b5db10a30305c8c94d1439706 394 Pfam PF05940 NnrS protein 16 388 5.9E-109 T 12-10-2018 IPR010266 NnrS vfu_A02953 b8f32db5904a60e47489726c126c9ec2 367 SUPERFAMILY SSF52540 62 199 1.05E-13 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A02953 b8f32db5904a60e47489726c126c9ec2 367 Gene3D G3DSA:3.40.50.300 7 189 1.1E-19 T 12-10-2018 vfu_A02953 b8f32db5904a60e47489726c126c9ec2 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.88 T 12-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 vfu_A02953 b8f32db5904a60e47489726c126c9ec2 367 Pfam PF03969 AFG1-like ATPase 1 364 1.9E-158 T 12-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 vfu_A00854 a9a8adcdfa30f9a638f68c006fdbdffe 279 PRINTS PR00169 Potassium channel signature 172 194 2.6E-9 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A00854 a9a8adcdfa30f9a638f68c006fdbdffe 279 PRINTS PR00169 Potassium channel signature 201 227 2.6E-9 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A00854 a9a8adcdfa30f9a638f68c006fdbdffe 279 PRINTS PR00169 Potassium channel signature 141 164 2.6E-9 T 12-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 vfu_A00854 a9a8adcdfa30f9a638f68c006fdbdffe 279 Gene3D G3DSA:1.10.287.70 28 229 5.7E-42 T 12-10-2018 vfu_A00854 a9a8adcdfa30f9a638f68c006fdbdffe 279 Pfam PF00520 Ion transport protein 65 225 3.4E-15 T 12-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 vfu_A00854 a9a8adcdfa30f9a638f68c006fdbdffe 279 SUPERFAMILY SSF81324 26 228 1.28E-45 T 12-10-2018 vfu_A01136 1bf38eacf34a394a51de7f9829c0f37b 45 Gene3D G3DSA:3.40.50.1470 1 45 7.8E-6 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 vfu_A03057 10a47c9b4e7d9f0e4795ee10510ad06a 390 SUPERFAMILY SSF102114 4 386 4.84E-110 T 12-10-2018 vfu_A03057 10a47c9b4e7d9f0e4795ee10510ad06a 390 SMART SM00729 6 227 5.6E-54 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 vfu_A03057 10a47c9b4e7d9f0e4795ee10510ad06a 390 Pfam PF06969 HemN C-terminal domain 316 374 1.3E-9 T 12-10-2018 IPR010723 HemN, C-terminal vfu_A03057 10a47c9b4e7d9f0e4795ee10510ad06a 390 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 2.7E-131 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 vfu_A03057 10a47c9b4e7d9f0e4795ee10510ad06a 390 Pfam PF04055 Radical SAM superfamily 11 180 9.3E-19 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 vfu_A03057 10a47c9b4e7d9f0e4795ee10510ad06a 390 Gene3D G3DSA:3.80.30.20 2 306 6.0E-96 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe vfu_A01391 b89dda90e6e6070fb915c0da28b12045 445 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 2 100 3.1E-16 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 vfu_A01391 b89dda90e6e6070fb915c0da28b12045 445 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 216 439 1.5E-48 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 vfu_A00592 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 Pfam PF01040 UbiA prenyltransferase family 21 272 2.7E-37 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 vfu_A00592 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.749 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 vfu_A00592 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 PIRSF PIRSF005355 1 303 6.1E-84 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 vfu_A00592 fbe38d20a9bc8a6953bffcb9f2b81d4f 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 1.2E-96 T 12-10-2018 vfu_B00045 a4fccfbf9b1a23f6a063a867c8b2de46 272 Pfam PF03239 Iron permease FTR1 family 1 253 6.7E-27 T 12-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 vfu_B00864 68212c93f074916e7cf5ba5ed881e547 145 Pfam PF07681 DoxX 17 103 7.2E-24 T 12-10-2018 IPR032808 DoxX family vfu_A00229 dc6a5084016d2de65aeb4314b893a6b9 152 Pfam PF07681 DoxX 23 104 6.1E-17 T 12-10-2018 IPR032808 DoxX family vfu_B01344 eb65dcf491a3aa438deb20cfcffe0171 325 PIRSF PIRSF034367 1 324 2.7E-189 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 vfu_B01344 eb65dcf491a3aa438deb20cfcffe0171 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 3.3E-179 T 12-10-2018 IPR015004 Protein of unknown function DUF1852 vfu_A02315 bb80915cc353c5553b199a1429427aba 313 PIRSF PIRSF006278 4 308 5.7E-22 T 12-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase vfu_A02315 bb80915cc353c5553b199a1429427aba 313 SUPERFAMILY SSF53686 15 303 9.21E-52 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme vfu_A02315 bb80915cc353c5553b199a1429427aba 313 Gene3D G3DSA:3.40.50.1100 43 146 3.6E-22 T 12-10-2018 vfu_A02315 bb80915cc353c5553b199a1429427aba 313 Gene3D G3DSA:3.40.50.1100 25 293 3.6E-22 T 12-10-2018 vfu_A02316 d8b08aa53138da0533d4d03be8a12dea 91 Pfam PF07383 Protein of unknown function (DUF1496) 39 86 8.4E-21 T 12-10-2018 IPR009971 Protein of unknown function DUF1496 vfu_A01790 8f5b7f0515dd7c68e24750c60c9e6944 158 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.4E-74 T 12-10-2018 IPR021334 Protein of unknown function DUF2947 vfu_B01522 471e22817b09e972ba4d61d6508cc33c 306 Pfam PF13737 Transposase DDE domain 19 129 5.7E-45 T 12-10-2018 IPR025668 Transposase DDE domain vfu_A00235 400b83c1bcc20531abbed19f02640046 634 Pfam PF04632 Fusaric acid resistance protein family 14 630 1.1E-99 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 vfu_A02328 4d9098ad643ed62ae61566ba453102ed 221 Pfam PF03609 PTS system sorbose-specific iic component 1 199 1.5E-61 T 12-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 vfu_B00143 e24ba0908b14f55c9028a99056ca850f 433 Pfam PF05525 Branched-chain amino acid transport protein 5 414 7.3E-114 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 vfu_B00143 e24ba0908b14f55c9028a99056ca850f 433 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 407 2.5E-107 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 vfu_B00907 d26f02d0450b16d76c59a91bdb9dd9a3 72 SUPERFAMILY SSF52833 1 71 8.69E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily vfu_B00907 d26f02d0450b16d76c59a91bdb9dd9a3 72 Pfam PF00085 Thioredoxin 1 69 1.1E-11 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 vfu_B00907 d26f02d0450b16d76c59a91bdb9dd9a3 72 Gene3D G3DSA:3.40.30.10 1 72 1.7E-15 T 12-10-2018 vfu_A00137 bd26b4c1f05cf010469e40f231c251dd 338 Pfam PF07507 WavE lipopolysaccharide synthesis 6 312 1.4E-130 T 12-10-2018 IPR011122 WavE lipopolysaccharide synthesis vfu_B01173 d35c2b17c26120d0fb2d21ba8f31168c 335 Gene3D G3DSA:1.25.40.10 53 329 2.0E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01173 d35c2b17c26120d0fb2d21ba8f31168c 335 SUPERFAMILY SSF81901 51 254 1.83E-13 T 12-10-2018 vfu_A01853 763577fb528de55f0f39b61c1105bce9 255 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 15 239 5.6E-93 T 12-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family vfu_A01534 74818e031b1672997ef900c496fd93d0 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 7.4E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A01534 74818e031b1672997ef900c496fd93d0 306 Gene3D G3DSA:1.10.3720.10 84 300 2.1E-22 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01534 74818e031b1672997ef900c496fd93d0 306 SUPERFAMILY SSF161098 88 290 6.92E-21 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00715 b528dcc3443d13555666245565189a73 239 SUPERFAMILY SSF161098 10 207 1.83E-38 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00715 b528dcc3443d13555666245565189a73 239 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 4.3E-20 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 vfu_B00715 b528dcc3443d13555666245565189a73 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 213 4.8E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_B00715 b528dcc3443d13555666245565189a73 239 Gene3D G3DSA:1.10.3720.10 2 223 3.6E-45 T 12-10-2018 IPR035906 MetI-like superfamily vfu_A01363 a0efc971e7549b2022dce22667530155 373 Pfam PF02119 Flagellar P-ring protein 31 372 1.4E-136 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 30 45 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 170 188 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 64 79 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 112 129 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 45 60 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 90 109 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 129 147 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 196 214 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 PRINTS PR01010 Flagellar P-ring protein signature 260 272 1.1E-77 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A01363 a0efc971e7549b2022dce22667530155 373 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 373 37.106 T 12-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 vfu_A02608 96419af76ee8d62bff832378cc89130b 528 Gene3D G3DSA:1.20.1530.20 2 362 1.2E-46 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily vfu_A02608 96419af76ee8d62bff832378cc89130b 528 Pfam PF02254 TrkA-N domain 388 504 1.0E-18 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 vfu_A02608 96419af76ee8d62bff832378cc89130b 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 1.8E-35 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 vfu_A02608 96419af76ee8d62bff832378cc89130b 528 SUPERFAMILY SSF51735 387 518 2.7E-15 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily vfu_A02608 96419af76ee8d62bff832378cc89130b 528 Gene3D G3DSA:3.40.50.720 379 527 1.0E-32 T 12-10-2018 vfu_A01779 f648340e16a0aec75f8e762fde020059 201 SUPERFAMILY SSF55811 38 190 8.8E-34 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 vfu_A01779 f648340e16a0aec75f8e762fde020059 201 Gene3D G3DSA:3.90.79.10 17 197 4.4E-48 T 12-10-2018 vfu_A01779 f648340e16a0aec75f8e762fde020059 201 Pfam PF00293 NUDIX domain 47 150 4.2E-15 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 vfu_A01036 8571d8962081cc92eede9f52765cc692 77 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.9E-31 T 12-10-2018 IPR021250 Protein of unknown function DUF2789 vfu_A01036 8571d8962081cc92eede9f52765cc692 77 Gene3D G3DSA:1.10.10.1130 1 77 6.9E-31 T 12-10-2018 vfu_A00948 8de189cdfea63c0e46a09e8f9a16de3e 292 Pfam PF01136 Peptidase family U32 81 210 3.3E-15 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 vfu_A00928 9a30b21456e46a3dd615bfd6253f2782 347 Gene3D G3DSA:2.40.160.10 22 347 1.4E-57 T 12-10-2018 IPR023614 Porin domain superfamily vfu_A00928 9a30b21456e46a3dd615bfd6253f2782 347 Pfam PF13609 Gram-negative porin 9 309 1.5E-25 T 12-10-2018 vfu_A00928 9a30b21456e46a3dd615bfd6253f2782 347 SUPERFAMILY SSF56935 23 347 1.83E-51 T 12-10-2018 vfu_A00277 d840a4fa7b82a5ce1a289794a99293d4 188 Pfam PF11355 Protein of unknown function (DUF3157) 2 187 5.4E-73 T 12-10-2018 IPR021501 Protein of unknown function DUF3157 vfu_A01849 a9f99e203292457d10531b2bd8e5e76d 181 Pfam PF01618 MotA/TolQ/ExbB proton channel family 70 174 3.5E-21 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel vfu_B00804 e7acb36a4f86e062bfb513b4ba665c85 164 Pfam PF11012 Protein of unknown function (DUF2850) 57 136 2.1E-31 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 vfu_B01252 16937774c0624bd147b4db34a7f0043b 131 Pfam PF09622 Putative integral membrane protein (DUF2391) 9 122 9.1E-10 T 12-10-2018 IPR024464 Protein of unknown function DUF2391 vfu_A03148 0c2d9147b02a2d60ede878898d6e37bc 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 1.5E-49 T 12-10-2018 IPR007433 Protein of unknown function DUF481 vfu_B00871 8cfbe9c6559d83c0192a6e4df9f5e1fb 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.8E-30 T 12-10-2018 IPR021432 Protein of unknown function DUF3081 vfu_B01256 8ad132845e23ec3a7366373495f5ad5f 120 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 4 118 6.0E-21 T 12-10-2018 IPR018893 Type VIII secretion system, CsgF vfu_A00107 63cf52d05703c614ed7c2a304c59ab12 82 Gene3D G3DSA:1.10.1200.10 2 79 3.1E-10 T 12-10-2018 IPR036736 ACP-like superfamily vfu_B00824 5fa75d088d7fa7304d48f31880b22a14 113 Pfam PF05656 Protein of unknown function (DUF805) 14 110 4.2E-30 T 12-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 vfu_A02122 dcf819f931dd14141139f079174035f2 124 Pfam PF03788 LrgA family 20 111 1.1E-25 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 vfu_A02122 dcf819f931dd14141139f079174035f2 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 1 120 20.832 T 12-10-2018 IPR022957 Uncharacterised protein family UPF0299 vfu_B00319 2c381a941bcdd0b42c53867ee38f4497 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.2E-53 T 12-10-2018 IPR014176 Phasin, subfamily 3 vfu_B00319 2c381a941bcdd0b42c53867ee38f4497 115 Pfam PF09361 Phasin protein 8 108 2.5E-20 T 12-10-2018 IPR018968 Phasin vfu_A01687 b262d2df799fd1d94997ec58da70b5dd 377 Gene3D G3DSA:3.20.20.210 2 377 4.3E-115 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A01687 b262d2df799fd1d94997ec58da70b5dd 377 SUPERFAMILY SSF51726 9 376 1.96E-73 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 vfu_A01687 b262d2df799fd1d94997ec58da70b5dd 377 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 175 350 1.6E-6 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 vfu_A01210 1ed606625733bbaaba020bfc84eebb74 87 Pfam PF08891 YfcL protein 4 84 5.6E-31 T 12-10-2018 IPR014987 Uncharacterised protein family YfcL vfu_B00860 8bf92cef3ea62651492c9857a7b106e5 480 Pfam PF03600 Citrate transporter 48 423 1.6E-52 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 vfu_A02403 0e58fe5e01747846d031b4fc5d85829f 425 SUPERFAMILY SSF48452 28 225 2.1E-8 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B00597 eb69f3e2fe63b538d8e0e61a196b1d30 228 SUPERFAMILY SSF51069 73 213 1.06E-12 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily vfu_B00597 eb69f3e2fe63b538d8e0e61a196b1d30 228 Gene3D G3DSA:3.10.200.10 48 227 2.3E-14 T 12-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily vfu_A02452 a0b01aee6c9b792b6f43adb5852b03ed 144 SUPERFAMILY SSF54637 6 137 7.67E-33 T 12-10-2018 IPR029069 HotDog domain superfamily vfu_A02452 a0b01aee6c9b792b6f43adb5852b03ed 144 Gene3D G3DSA:3.10.129.10 2 138 5.3E-39 T 12-10-2018 vfu_A02452 a0b01aee6c9b792b6f43adb5852b03ed 144 Pfam PF13279 Thioesterase-like superfamily 16 136 6.0E-21 T 12-10-2018 vfu_A02140 23ded1dea19965e8cdd92bc57bc316c9 346 Gene3D G3DSA:2.120.10.30 6 346 1.2E-95 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like vfu_A02140 23ded1dea19965e8cdd92bc57bc316c9 346 Pfam PF07995 Glucose / Sorbosone dehydrogenase 22 343 4.0E-107 T 12-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase vfu_A02140 23ded1dea19965e8cdd92bc57bc316c9 346 SUPERFAMILY SSF50952 6 344 3.01E-35 T 12-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 vfu_B00539 2562edb4c40abace5760cf5deafd18bf 312 SUPERFAMILY SSF161098 42 312 6.28E-60 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00539 2562edb4c40abace5760cf5deafd18bf 312 Gene3D G3DSA:1.10.3720.10 34 302 2.0E-53 T 12-10-2018 IPR035906 MetI-like superfamily vfu_B00539 2562edb4c40abace5760cf5deafd18bf 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 3.9E-13 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 vfu_A00631 45b916cbb1a92e56f746192bc173b55a 196 Gene3D G3DSA:3.30.70.60 92 196 2.0E-26 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 vfu_A00631 45b916cbb1a92e56f746192bc173b55a 196 Pfam PF04350 Pilus assembly protein, PilO 47 189 1.3E-45 T 12-10-2018 IPR007445 Pilus assembly protein, PilO vfu_A00631 45b916cbb1a92e56f746192bc173b55a 196 PIRSF PIRSF016482 1 196 3.5E-75 T 12-10-2018 IPR007445 Pilus assembly protein, PilO vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 SUPERFAMILY SSF51366 4 218 3.3E-78 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.2E-91 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.3E-100 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 Gene3D G3DSA:3.20.20.70 5 221 3.6E-86 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 vfu_A00638 05bcbcae53d48dc970a0263c86a1dbbf 223 PIRSF PIRSF001461 1 223 2.5E-106 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 vfu_A02708 9b439bead36bc9feb53b22d97b88fc47 215 Gene3D G3DSA:1.10.3680.10 96 215 2.6E-9 T 12-10-2018 IPR029024 TerB-like vfu_A02708 9b439bead36bc9feb53b22d97b88fc47 215 Pfam PF04391 Protein of unknown function (DUF533) 37 212 5.2E-65 T 12-10-2018 IPR007486 Inner membrane protein YebE vfu_A02708 9b439bead36bc9feb53b22d97b88fc47 215 SUPERFAMILY SSF158682 71 214 3.53E-25 T 12-10-2018 IPR029024 TerB-like vfu_A01284 1b2c3dce88f5f06d57f733aba344d8a2 336 Pfam PF11168 Protein of unknown function (DUF2955) 11 148 8.7E-12 T 12-10-2018 IPR022604 Protein of unknown function DUF2955 vfu_A01880 f9ce7f7333b489feadd1c88e4525455c 183 Pfam PF11748 Protein of unknown function (DUF3306) 5 108 9.6E-18 T 12-10-2018 IPR021735 Protein of unknown function DUF3306 vfu_A01610 a66e7f9b066d1fcdb9defc9ebdc90f85 151 Pfam PF05433 Glycine zipper 2TM domain 56 92 1.7E-10 T 12-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 vfu_A02205 379a4645a8fe62f12915cabf90e22620 571 SUPERFAMILY SSF48371 148 258 2.62E-7 T 12-10-2018 IPR016024 Armadillo-type fold vfu_A00469 e5291a58b8f31cce3d482273ff287919 322 PIRSF PIRSF003097 23 318 1.1E-62 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 vfu_A02704 e2e89f76f58e6032fc903936541c29c2 280 Pfam PF03806 AbgT putative transporter family 19 279 7.9E-106 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 vfu_A00744 79202ada7e1aaa0cc3b7074cf328d314 109 Gene3D G3DSA:3.30.750.24 7 105 2.0E-15 T 12-10-2018 IPR036513 STAS domain superfamily vfu_A00744 79202ada7e1aaa0cc3b7074cf328d314 109 SUPERFAMILY SSF52091 1 97 3.92E-18 T 12-10-2018 IPR036513 STAS domain superfamily vfu_A00744 79202ada7e1aaa0cc3b7074cf328d314 109 Pfam PF13466 STAS domain 16 93 2.8E-19 T 12-10-2018 IPR002645 STAS domain vfu_A00762 8af8b3acabdff330016328a84cad397f 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 3.5E-119 T 12-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 vfu_A00762 8af8b3acabdff330016328a84cad397f 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 2.3E-73 T 12-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 vfu_B00659 3bd093bf4235f6023366ea93cb65eb92 205 Pfam PF12261 Thermostable hemolysin 16 185 2.7E-63 T 12-10-2018 IPR022050 Thermostable hemolysin vfu_B00278 b559602741a9e100d510bfb4044c6892 216 Gene3D G3DSA:2.40.70.10 78 205 2.6E-40 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily vfu_B00278 b559602741a9e100d510bfb4044c6892 216 SUPERFAMILY SSF50630 81 212 7.31E-40 T 12-10-2018 IPR021109 Aspartic peptidase domain superfamily vfu_B00278 b559602741a9e100d510bfb4044c6892 216 Pfam PF05618 Putative ATP-dependant zinc protease 81 215 5.3E-44 T 12-10-2018 vfu_A02555 39f18a24baef1f7ec9150564deac4618 241 Pfam PF11859 Protein of unknown function (DUF3379) 1 237 4.5E-84 T 12-10-2018 IPR021806 Protein of unknown function DUF3379 vfu_A02623 8d37ef29e562777770cff37571c0a415 244 Pfam PF07556 Protein of unknown function (DUF1538) 21 242 2.7E-71 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 vfu_B00999 e53f1088c9a52f65fbda2dfcc923604e 129 Pfam PF04134 Protein of unknown function, DUF393 6 114 1.8E-23 T 12-10-2018 IPR007263 Protein of unknown function DUF393 vfu_A02697 a73631a086e5d3de737981a05b2ab5b5 243 Pfam PF00849 RNA pseudouridylate synthase 11 170 5.2E-31 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02697 a73631a086e5d3de737981a05b2ab5b5 243 SUPERFAMILY SSF55120 2 236 3.84E-61 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_A02697 a73631a086e5d3de737981a05b2ab5b5 243 Gene3D G3DSA:3.30.2350.10 1 223 1.6E-58 T 12-10-2018 vfu_A02697 a73631a086e5d3de737981a05b2ab5b5 243 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 vfu_B00030 7a8965583dfb935461fd5f36ac4d1c9b 344 Gene3D G3DSA:3.40.190.170 40 344 1.3E-75 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily vfu_B00030 7a8965583dfb935461fd5f36ac4d1c9b 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 48 328 1.5E-42 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 vfu_A02724 9d93869f689c343a0223946b4c77b4d4 213 PIRSF PIRSF004525 2 84 6.5E-6 T 12-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted vfu_A02724 9d93869f689c343a0223946b4c77b4d4 213 PIRSF PIRSF004525 117 213 0.47 T 12-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted vfu_A01227 43d512e420f71224743c1d3ce7b411c0 257 Pfam PF08907 Domain of unknown function (DUF1853) 41 217 7.7E-40 T 12-10-2018 IPR015003 Protein of unknown function DUF1853 vfu_B00268 02ecba4583861c747eb9fcb9fd7bd294 319 Pfam PF03595 Voltage-dependent anion channel 12 305 2.8E-26 T 12-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 vfu_B00268 02ecba4583861c747eb9fcb9fd7bd294 319 Gene3D G3DSA:1.50.10.150 7 310 6.3E-31 T 12-10-2018 IPR038665 Voltage-dependent anion channel superfamily vfu_B00695 6c978a5303d4731582d0d1ee726f93bf 161 Pfam PF14316 Domain of unknown function (DUF4381) 10 145 1.0E-36 T 12-10-2018 IPR025489 Protein of unknown function (DUF4381 vfu_B00486 6ae5ad52e0353376a5ab1adf0f7dd3c5 205 Pfam PF01810 LysE type translocator 12 200 8.7E-12 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A02662 d8970ba3937363e2fe5e5f1c45dac81e 200 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 186 5.6E-34 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT vfu_A03092 9ed9e2d8400a4824cd38d9c0ddfda83d 268 SUPERFAMILY SSF49785 2 157 1.53E-20 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily vfu_A03092 9ed9e2d8400a4824cd38d9c0ddfda83d 268 Gene3D G3DSA:2.60.120.260 27 158 2.4E-11 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily vfu_A00335 23c029b09b623265a5b35984c5512a92 168 Pfam PF15941 FidL-like putative membrane protein 75 164 4.0E-33 T 12-10-2018 IPR031854 Putative membrane protein FidL-like vfu_B01088 93f67e353ace513d9b6453f940ad674e 324 Pfam PF13609 Gram-negative porin 8 301 1.6E-28 T 12-10-2018 vfu_B01088 93f67e353ace513d9b6453f940ad674e 324 Gene3D G3DSA:2.40.160.10 22 324 3.3E-66 T 12-10-2018 IPR023614 Porin domain superfamily vfu_B01088 93f67e353ace513d9b6453f940ad674e 324 SUPERFAMILY SSF56935 22 324 1.83E-51 T 12-10-2018 vfu_A02687 2076d1a5be4d5fa8d0637fde8aae0931 132 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.2E-29 T 12-10-2018 IPR006696 Protein of unknown function DUF423 vfu_A00770 6ebaba7b350ab8e10903f12f961bc507 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 63 1.7E-18 T 12-10-2018 IPR018691 Protein of unknown function DUF2188 vfu_A01025 46c39a7e33c84a19aa959d33e61b950d 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 3.1E-51 T 12-10-2018 IPR005619 Uncharacterised protein family, YajG vfu_B00586 8ebf1476daa77f0481d11a3d5cba86fc 299 PIRSF PIRSF028200 1 280 3.7E-75 T 12-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 vfu_A01612 e2bd5d1d293f5cee54be2ad807096e80 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 4.1E-41 T 12-10-2018 IPR019633 Protein of unknown function DUF2498 vfu_A01612 e2bd5d1d293f5cee54be2ad807096e80 82 Gene3D G3DSA:1.10.1900.30 9 76 1.7E-35 T 12-10-2018 IPR038191 YciN superfamily vfu_A00565 51428b1c724ee5bb01da275903776524 481 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 477 2.2E-135 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 vfu_A01602 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 Pfam PF07690 Major Facilitator Superfamily 4 345 1.1E-29 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 vfu_A01602 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 Gene3D G3DSA:1.20.1250.20 1 389 3.8E-44 T 12-10-2018 vfu_A01602 a3a3f6acf8f3d35fd3f870d0c0ef96df 399 SUPERFAMILY SSF103473 3 380 1.31E-47 T 12-10-2018 IPR036259 MFS transporter superfamily vfu_B00090 729549fefcbdfd21214ccc62b7b7adca 185 Gene3D G3DSA:1.10.357.10 1 184 6.2E-50 T 12-10-2018 vfu_B00090 729549fefcbdfd21214ccc62b7b7adca 185 SUPERFAMILY SSF48498 75 184 4.45E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_B00090 729549fefcbdfd21214ccc62b7b7adca 185 SUPERFAMILY SSF46689 3 79 2.05E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_B00090 729549fefcbdfd21214ccc62b7b7adca 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00090 729549fefcbdfd21214ccc62b7b7adca 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.0E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_B00090 729549fefcbdfd21214ccc62b7b7adca 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 4.4E-15 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 vfu_A01050 5ed0113a637236fc2afe9c5c9a379b52 205 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 31 161 8.3E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A02360 88e2f941400eeae2bd171b07c2992cda 334 SUPERFAMILY SSF56935 32 334 9.46E-27 T 12-10-2018 vfu_A02360 88e2f941400eeae2bd171b07c2992cda 334 Pfam PF13609 Gram-negative porin 7 315 3.5E-22 T 12-10-2018 vfu_A02360 88e2f941400eeae2bd171b07c2992cda 334 Gene3D G3DSA:2.40.160.10 21 334 2.4E-20 T 12-10-2018 IPR023614 Porin domain superfamily vfu_B00462 c6785b46e6990e13e773ecfb44e538bd 507 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 35 498 1.0E-127 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 vfu_A01837 bd9454509cfd1ea3e10917e6fae238f6 100 Pfam PF08402 TOBE domain 8 82 2.0E-4 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 vfu_A01837 bd9454509cfd1ea3e10917e6fae238f6 100 SUPERFAMILY SSF50331 4 89 2.18E-15 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal vfu_A01837 bd9454509cfd1ea3e10917e6fae238f6 100 Gene3D G3DSA:2.40.50.940 4 83 3.5E-12 T 12-10-2018 vfu_A01837 bd9454509cfd1ea3e10917e6fae238f6 100 Gene3D G3DSA:2.40.50.140 15 74 3.5E-12 T 12-10-2018 vfu_A01448 086df3fe27e7d3957e5d327242f02917 367 Pfam PF03916 Polysulphide reductase, NrfD 10 311 3.6E-18 T 12-10-2018 IPR005614 NrfD family vfu_A00769 cdbb79d2fb226364920f2a3ab4748a52 309 Pfam PF11185 Protein of unknown function (DUF2971) 81 166 3.8E-9 T 12-10-2018 IPR021352 Protein of unknown function DUF2971 vfu_B00973 7a5a9af01c3d9c2946cfa1a3ff02f55d 557 Pfam PF03961 Flagellar Assembly Protein A 81 544 8.4E-121 T 12-10-2018 IPR005646 Flagellar assembly protein A vfu_B00005 e64aa450d5a59080f95fedff87096e4c 47 Pfam PF11665 Protein of unknown function (DUF3265) 16 43 1.9E-10 T 12-10-2018 IPR021681 Protein of unknown function DUF3265 vfu_A01901 bf047d2b3245378f7eaa10d6a399e9cc 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 7.7E-55 T 12-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain vfu_A01244 996ec2ce8421aca2117890985f38bf0b 76 SUPERFAMILY SSF46785 1 54 1.78E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily vfu_A01244 996ec2ce8421aca2117890985f38bf0b 76 Pfam PF09012 FeoC like transcriptional regulator 2 52 6.4E-13 T 12-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC vfu_A00464 0f594a740f31f4269a24cc4e562edb43 195 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 2.5E-29 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 vfu_A00464 0f594a740f31f4269a24cc4e562edb43 195 Pfam PF01914 MarC family integral membrane protein 3 191 6.7E-54 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 vfu_B01112 053699f06e8789e8fcdfa623aeeff79a 449 Pfam PF01554 MatE 22 182 1.6E-21 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01112 053699f06e8789e8fcdfa623aeeff79a 449 Pfam PF01554 MatE 241 392 3.7E-14 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01112 053699f06e8789e8fcdfa623aeeff79a 449 PIRSF PIRSF006603 1 445 1.1E-84 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B01112 053699f06e8789e8fcdfa623aeeff79a 449 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 404 1.1E-43 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 vfu_B00933 34b0f74f7675c537039f82251519371b 240 Pfam PF01925 Sulfite exporter TauE/SafE 12 232 8.1E-26 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 vfu_A02564 a776daff9b1e2ad32404cd2e9e528dc9 704 Pfam PF05170 AsmA family 2 594 1.7E-138 T 12-10-2018 IPR007844 AsmA vfu_B00828 bcbab3fd531e0794dcc64dcc9f215331 114 Pfam PF01844 HNH endonuclease 31 79 4.9E-11 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 vfu_B00828 bcbab3fd531e0794dcc64dcc9f215331 114 SMART SM00507 19 74 3.0E-5 T 12-10-2018 IPR003615 HNH nuclease vfu_B01314 645928a6712105018a94f1342b960070 136 SUPERFAMILY SSF49401 2 136 1.09E-18 T 12-10-2018 IPR008966 Adhesion domain superfamily vfu_B01314 645928a6712105018a94f1342b960070 136 Pfam PF00419 Fimbrial protein 4 136 4.6E-7 T 12-10-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 vfu_B01314 645928a6712105018a94f1342b960070 136 Gene3D G3DSA:2.60.40.1090 1 135 6.7E-19 T 12-10-2018 IPR036937 Fimbrial-type adhesion domain superfamily GO:0007155|GO:0009289 vfu_B00094 eb35bde05d7eaf106f191df5f993c833 348 Pfam PF05145 Transition state regulatory protein AbrB 36 336 4.2E-54 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 vfu_B01123 7bd4c5d6d64c1de106952b3a8c467f72 205 Pfam PF07274 Protein of unknown function (DUF1440) 26 181 1.2E-52 T 12-10-2018 IPR009898 Protein of unknown function DUF1440 vfu_A01721 d037da3e897eada1eab71c40114b5d5b 176 PRINTS PR01021 OMPA domain signature 102 118 2.3E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01721 d037da3e897eada1eab71c40114b5d5b 176 PRINTS PR01021 OMPA domain signature 57 79 2.3E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01721 d037da3e897eada1eab71c40114b5d5b 176 PRINTS PR01021 OMPA domain signature 87 102 2.3E-11 T 12-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 vfu_A01721 d037da3e897eada1eab71c40114b5d5b 176 SUPERFAMILY SSF103088 30 156 1.03E-32 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01721 d037da3e897eada1eab71c40114b5d5b 176 Gene3D G3DSA:3.30.1330.60 29 165 3.5E-33 T 12-10-2018 IPR036737 OmpA-like domain superfamily vfu_A01721 d037da3e897eada1eab71c40114b5d5b 176 Pfam PF00691 OmpA family 56 151 7.1E-22 T 12-10-2018 IPR006665 OmpA-like domain vfu_A00775 2a75b809fb963e7e639f9e97f5828f8c 109 Pfam PF10980 Protein of unknown function (DUF2787) 3 107 1.6E-38 T 12-10-2018 IPR021248 Protein of unknown function DUF2787 vfu_A00775 2a75b809fb963e7e639f9e97f5828f8c 109 Gene3D G3DSA:3.10.450.430 1 109 2.9E-45 T 12-10-2018 vfu_A01290 7d8ece862b87e1985eec0e2478120010 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.969 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 vfu_A01290 7d8ece862b87e1985eec0e2478120010 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 2.0E-100 T 12-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 vfu_A00074 cf3cd30d9cd4de6c71990eb388c6fea8 100 SUPERFAMILY SSF52794 2 99 1.15E-31 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 vfu_A00074 cf3cd30d9cd4de6c71990eb388c6fea8 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 8.7E-30 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 vfu_A00074 cf3cd30d9cd4de6c71990eb388c6fea8 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 96 6.7E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 vfu_A00074 cf3cd30d9cd4de6c71990eb388c6fea8 100 Gene3D G3DSA:3.40.50.2300 1 99 1.2E-34 T 12-10-2018 vfu_B00285 32aa31374f7df6241c2342cd87f94778 152 Pfam PF04143 Sulphur transport 53 136 9.3E-7 T 12-10-2018 IPR007272 Sulphur transport domain vfu_B00874 ebd49a2ad44a7a26e93837d3b28b3eff 594 Pfam PF02225 PA domain 145 246 4.0E-17 T 12-10-2018 IPR003137 PA domain vfu_B00874 ebd49a2ad44a7a26e93837d3b28b3eff 594 SUPERFAMILY SSF53187 38 540 1.01E-58 T 12-10-2018 vfu_B00874 ebd49a2ad44a7a26e93837d3b28b3eff 594 Pfam PF04389 Peptidase family M28 273 533 2.4E-37 T 12-10-2018 IPR007484 Peptidase M28 vfu_B00874 ebd49a2ad44a7a26e93837d3b28b3eff 594 SUPERFAMILY SSF52025 124 240 4.19E-16 T 12-10-2018 vfu_A00209 317d37dcd9d661dc528057b3d3c33529 70 Pfam PF11726 Inovirus Gp2 3 68 1.5E-16 T 12-10-2018 vfu_B00609 b060b93493d697f2906636ea9c9f8d9d 688 Pfam PF04632 Fusaric acid resistance protein family 16 677 5.4E-143 T 12-10-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0022857|GO:0055085 vfu_A01347 1b605653403be648027f8b0de3848359 198 Pfam PF13305 WHG domain 95 174 2.9E-11 T 12-10-2018 IPR025996 WHG domain vfu_A01347 1b605653403be648027f8b0de3848359 198 SUPERFAMILY SSF48498 84 197 2.4E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily vfu_A01347 1b605653403be648027f8b0de3848359 198 SUPERFAMILY SSF46689 2 75 5.82E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 vfu_A01347 1b605653403be648027f8b0de3848359 198 Gene3D G3DSA:1.10.357.10 3 193 2.8E-40 T 12-10-2018 vfu_B01147 dffa6e44b937d97804bcb73341878a60 181 Pfam PF06042 Nucleotidyltransferase 23 180 1.7E-61 T 12-10-2018 IPR009267 Putative nucleotidyltransferase vfu_A01114 d305807babb0852ecef2a3d9bb47c765 144 PIRSF PIRSF028687 1 144 2.5E-61 T 12-10-2018 IPR007293 Flagellar protein FlgP vfu_A01114 d305807babb0852ecef2a3d9bb47c765 144 Pfam PF02169 LPP20 lipoprotein 28 119 3.7E-8 T 12-10-2018 IPR024952 Lipoprotein LPP20-like vfu_A00512 493eef8c023cd6bea4a6d0ee14a04a92 88 SUPERFAMILY SSF52540 7 85 1.43E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase vfu_A00512 493eef8c023cd6bea4a6d0ee14a04a92 88 Gene3D G3DSA:3.40.50.300 1 88 8.3E-28 T 12-10-2018 vfu_A02547 90bae5cc7f761d766c7f2b1026075d7e 134 PIRSF PIRSF016789 8 129 2.6E-43 T 12-10-2018 IPR007401 Protein of unknown function DUF454 vfu_A02547 90bae5cc7f761d766c7f2b1026075d7e 134 Pfam PF04304 Protein of unknown function (DUF454) 10 123 3.6E-39 T 12-10-2018 IPR007401 Protein of unknown function DUF454 vfu_B00479 14b0cef2f0332b997c572e9aaee81977 49 Pfam PF10617 Protein of unknown function (DUF2474) 16 48 1.4E-14 T 12-10-2018 IPR018895 Protein of unknown function DUF2474 vfu_A00712 f16640d1b6dfcf2bbd6f8614eadc016c 113 Pfam PF10795 Protein of unknown function (DUF2607) 2 96 1.9E-39 T 12-10-2018 IPR019731 Protein of unknown function DUF2607 vfu_A02010 0841d0af1242f476a68ab2c6f2a0dc77 220 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 9.2E-43 T 12-10-2018 IPR006214 Bax inhibitor 1-related vfu_A02010 0841d0af1242f476a68ab2c6f2a0dc77 220 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 88 118 - T 12-10-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 vfu_A02830 50a235c0735563583be48a8cc326e86e 160 Pfam PF11012 Protein of unknown function (DUF2850) 72 151 3.1E-32 T 12-10-2018 IPR021271 Protein of unknown function DUF2850 vfu_B00427 e29a492932c4df0c90e4a01a50d42f2f 157 Pfam PF10082 Putative beta-barrel porin 2 8 156 1.2E-6 T 12-10-2018 IPR018759 Putative beta-barrel porin 2 vfu_B00439 9532d82d762a13a4881fcbb510ed57d6 143 Pfam PF13778 Domain of unknown function (DUF4174) 19 133 6.8E-27 T 12-10-2018 IPR025232 Domain of unknown function DUF4174 vfu_A02396 501b47459bb298a2b10b7def5fd66234 258 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 255 7.9E-65 T 12-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV vfu_B01356 dfe91857ebbcd52b7f5a4b79bf0246f8 178 Pfam PF12570 Protein of unknown function (DUF3750) 44 176 2.7E-49 T 12-10-2018 IPR022224 Protein of unknown function DUF3750 vfu_A02211 0eb3f2b966a53b605b746508ac909815 506 Gene3D G3DSA:1.20.1730.10 6 486 1.9E-73 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily vfu_A02211 0eb3f2b966a53b605b746508ac909815 506 Pfam PF00474 Sodium:solute symporter family 34 416 5.1E-44 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 vfu_A02622 0512723f680a373ba4c359c48ee4175b 264 Pfam PF07556 Protein of unknown function (DUF1538) 21 246 2.7E-69 T 12-10-2018 IPR011435 Protein of unknown function DUF1538 vfu_A00207 227b1a7ead64550506ea42cc47e7a0e5 164 Pfam PF11726 Inovirus Gp2 1 162 1.0E-38 T 12-10-2018 vfu_B00437 837fa3b87c40a7aba772cc79bacb41e4 59 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 3.8E-21 T 12-10-2018 IPR021677 Protein of unknown function DUF2986 vfu_A03042 bce0a03f1f1d93627d5c4fec5daf0498 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 6.8E-25 T 12-10-2018 IPR018692 Predicted integral membrane protein DUF2189 vfu_A02252 f26c08950eef94f31f6247bc42ec35dc 116 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 15 116 13.382 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_A02252 f26c08950eef94f31f6247bc42ec35dc 116 Pfam PF02049 Flagellar hook-basal body complex protein FliE 42 116 1.7E-18 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 vfu_B00572 5404eee5136077db0aaf50e28537659f 149 SUPERFAMILY SSF55961 2 146 7.62E-20 T 12-10-2018 vfu_B00572 5404eee5136077db0aaf50e28537659f 149 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 137 7.8E-5 T 12-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like vfu_B00572 5404eee5136077db0aaf50e28537659f 149 Gene3D G3DSA:3.30.530.20 1 149 3.0E-18 T 12-10-2018 IPR023393 START-like domain superfamily vfu_B00500 1cc7a52f35ccc2c5a0f97d4001376707 284 SUPERFAMILY SSF158855 29 281 9.29E-59 T 12-10-2018 vfu_B00500 1cc7a52f35ccc2c5a0f97d4001376707 284 Pfam PF03280 Proteobacterial lipase chaperone protein 86 272 1.1E-43 T 12-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 vfu_B01257 5f307fe95f51c2942e713e63d9b7065c 124 Pfam PF10627 Curli assembly protein CsgE 18 122 4.4E-38 T 12-10-2018 IPR018900 Curli assembly protein CsgE vfu_B00688 f3fe7c8536778350acec6c4df9308f73 326 Pfam PF14321 Domain of unknown function (DUF4382) 37 185 6.4E-25 T 12-10-2018 IPR025491 Domain of unknown function DUF4382 vfu_A01454 aecfb7ca1fc13a5ee14db1ff09592a91 454 PIRSF PIRSF006446 2 451 2.1E-213 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_A01454 aecfb7ca1fc13a5ee14db1ff09592a91 454 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 2.6E-163 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 vfu_B00725 f8e33b9fa6605bff9f7d9d9118ebd957 411 SUPERFAMILY SSF51905 4 292 2.72E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily vfu_B00725 f8e33b9fa6605bff9f7d9d9118ebd957 411 Pfam PF01266 FAD dependent oxidoreductase 6 397 2.0E-64 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 vfu_A01955 d6cdde47e99da2517da362d67829af4d 707 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 238 497 2.3E-15 T 12-10-2018 IPR018712 Domain of unknown function DUF2235 vfu_B00234 d0dc9c3dde4b7c28ef10bd29bcaa5d53 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.7E-34 T 12-10-2018 IPR021811 Protein of unknown function DUF3389 vfu_A02192 7c9fff44851946f6d61006740a788d20 106 Pfam PF11872 Protein of unknown function (DUF3392) 2 103 2.5E-39 T 12-10-2018 IPR021813 Protein of unknown function DUF3392 vfu_B01013 1c82a4356dc586f75e5013d12a48dfeb 333 Gene3D G3DSA:1.25.40.10 147 276 2.0E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01013 1c82a4356dc586f75e5013d12a48dfeb 333 Gene3D G3DSA:1.25.40.10 18 144 9.5E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 vfu_B01013 1c82a4356dc586f75e5013d12a48dfeb 333 SUPERFAMILY SSF81901 24 239 2.27E-14 T 12-10-2018 vfu_A02486 21309d84780aaf87ec58907c4f3d65c9 274 Pfam PF11207 Protein of unknown function (DUF2989) 17 219 1.9E-76 T 12-10-2018 IPR021372 Protein of unknown function DUF2989 vfu_B01471 e81acfeb1cf4833f7bd30323ebaf8f43 238 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 3 237 1.1E-102 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 vfu_A02753 abb22a16e54f26bd536a14865e72aa93 240 SUPERFAMILY SSF46894 25 118 1.08E-12 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 vfu_A02753 abb22a16e54f26bd536a14865e72aa93 240 Gene3D G3DSA:1.10.10.10 20 133 2.0E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily vfu_A02753 abb22a16e54f26bd536a14865e72aa93 240 SMART SM00862 38 116 3.3E-6 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A02753 abb22a16e54f26bd536a14865e72aa93 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 41 116 2.3E-12 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 vfu_A01856 f3ea3e8ac8400bcd0c2e63469ffb03b6 330 Pfam PF11279 Protein of unknown function (DUF3080) 27 327 5.2E-94 T 12-10-2018 IPR021431 Protein of unknown function DUF3080 vfu_A01364 d2557a1d0a419dd5e99460b6f4180498 174 Pfam PF10135 Rod binding protein 54 104 2.6E-13 T 12-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal vfu_A00032 c8787b1e6d31876d64699874898c4113 322 SUPERFAMILY SSF64182 4 318 4.32E-40 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily vfu_A01941 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 399 461 7.9E-10 T 12-10-2018 IPR003399 Mce/MlaD vfu_A01941 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 47 138 2.3E-13 T 12-10-2018 IPR003399 Mce/MlaD vfu_A01941 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 286 375 4.1E-6 T 12-10-2018 IPR003399 Mce/MlaD vfu_A01941 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 752 807 1.4E-7 T 12-10-2018 IPR003399 Mce/MlaD vfu_A01941 78ad31af0086049cfed93a7f6139002b 878 Pfam PF02470 MlaD protein 166 226 2.1E-6 T 12-10-2018 IPR003399 Mce/MlaD vfu_A01388 4caea12fe8e1e78197d5aec8d2a5d3c1 354 Pfam PF02120 Flagellar hook-length control protein FliK 236 317 1.5E-19 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal vfu_A01388 4caea12fe8e1e78197d5aec8d2a5d3c1 354 Gene3D G3DSA:3.30.750.140 200 327 3.3E-21 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily vfu_A02757 f92d2993607d52ff57057498a50be5f0 450 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 149 313 1.1E-18 T 12-10-2018 IPR000477 Reverse transcriptase domain vfu_A02757 f92d2993607d52ff57057498a50be5f0 450 SUPERFAMILY SSF56672 147 317 8.36E-7 T 12-10-2018 vfu_B00403 f26555b9281e449e5893dd2c394789f3 235 Pfam PF05944 Phage small terminase subunit 48 171 2.3E-13 T 12-10-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 vfu_A02449 a1c2c6e059b29a4c08c81260861cf004 310 Pfam PF01148 Cytidylyltransferase family 42 307 2.0E-68 T 12-10-2018 vfu_A02449 a1c2c6e059b29a4c08c81260861cf004 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 vfu_B01104 ac51997a80f8c9a45516844367290f9f 75 Pfam PF11137 Protein of unknown function (DUF2909) 7 68 8.5E-19 T 12-10-2018 IPR021313 Protein of unknown function DUF2909 vfu_B00930 5c7da96ee10a4d82da2f56d341199533 198 Pfam PF01810 LysE type translocator 14 182 3.0E-12 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 vfu_A00218 ff0a87168ecec3a2e698311c55a2ca91 100 Pfam PF12305 Protein of unknown function (DUF3630) 4 96 2.1E-37 T 12-10-2018 IPR022080 Protein of unknown function DUF3630 vfu_A01295 42775f5323bc6354b55da09cb4beebd4 211 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 203 8.2E-67 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 vfu_A01295 42775f5323bc6354b55da09cb4beebd4 211 Pfam PF01914 MarC family integral membrane protein 6 207 5.3E-65 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 vfu_A00132 949fc79b90a41556a87021cd15245593 751 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 44 735 8.7E-276 T 12-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH vfu_B01351 2386f2a6561e0a6d9f11f7681cc1269b 144 Pfam PF07098 Protein of unknown function (DUF1360) 44 74 8.9E-5 T 12-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 vfu_A02721 d831e3c4cd99214918fd0007417e98f7 519 Pfam PF03806 AbgT putative transporter family 20 517 6.4E-211 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 vfu_A03053 d080d4ec0517fabb07f76f76a3299602 167 Pfam PF02325 YGGT family 1 60 2.4E-15 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 vfu_A03053 d080d4ec0517fabb07f76f76a3299602 167 Pfam PF02325 YGGT family 91 155 9.6E-20 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 vfu_A00395 6c87f422bd508489086a3d410a265797 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 302 4.7E-47 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_A00182 7c9ae9179325bc58b5483edd2be4f7ae 174 SUPERFAMILY SSF53098 30 160 2.78E-37 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily vfu_A00182 7c9ae9179325bc58b5483edd2be4f7ae 174 Gene3D G3DSA:3.30.420.10 34 173 3.3E-16 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 vfu_A00182 7c9ae9179325bc58b5483edd2be4f7ae 174 Pfam PF00665 Integrase core domain 38 151 4.0E-33 T 12-10-2018 IPR001584 Integrase, catalytic core GO:0015074 vfu_A00254 3b4ccc9000893b1906079d895a765375 83 Pfam PF04380 Membrane fusogenic activity 1 78 3.6E-28 T 12-10-2018 IPR007475 Membrane fusogenic activity vfu_A02703 f40ec44a726fa3c3a82deca2d07e0fc8 243 Pfam PF03806 AbgT putative transporter family 1 241 8.3E-109 T 12-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 vfu_B01239 27ef996417d515e593a188837b0e7b20 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 153 7.3E-33 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A00399 7f8bb65940e943db1c8d80ddba9fe0ce 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 61 294 9.5E-35 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_B01107 840ccd3a9ee0e792de0b0898b175d418 349 Pfam PF02628 Cytochrome oxidase assembly protein 21 326 3.8E-76 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 vfu_A02157 c72c2d08ae1c6a8c4e561ae948c7d10a 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 2.3E-97 T 12-10-2018 IPR021974 Protein of unknown function DUF3581 vfu_A01105 2832378e08951fc820206bfed2d0804e 243 Pfam PF01963 TraB family 1 231 5.6E-40 T 12-10-2018 IPR002816 Pheromone shutdown, TraB vfu_A01456 3d9a8a5a19a375b4423cc343b93c8f00 49 Pfam PF10617 Protein of unknown function (DUF2474) 12 48 3.8E-18 T 12-10-2018 IPR018895 Protein of unknown function DUF2474 vfu_B00476 f035f2a968dcdb93b001bdfd44c3d7cc 299 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 2 277 5.0E-63 T 12-10-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 vfu_B00745 6adf2d9db63cfc638f087b8785129cf0 454 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 114 303 1.0E-5 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 vfu_A01685 018533c1b8717bfac0ee80febb52d7e9 418 Pfam PF03222 Tryptophan/tyrosine permease family 31 391 1.3E-11 T 12-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 vfu_B00286 1380811a691579173c870bdae213d0ca 139 Pfam PF04143 Sulphur transport 3 130 5.7E-11 T 12-10-2018 IPR007272 Sulphur transport domain vfu_A00716 703eb2325e48fa82ce0d76ab999f1382 1251 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 914 1250 1.3E-62 T 12-10-2018 IPR007452 Translocation and assembly module TamB vfu_A00918 6ca149a78edac9e65ac8779d54dcaabd 361 Pfam PF01594 AI-2E family transporter 14 347 6.8E-52 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like vfu_A02503 4ebb3945c45ceb9599618e1b66f54e7b 110 Pfam PF10761 Protein of unknown function (DUF2590) 8 105 5.8E-41 T 12-10-2018 IPR019697 Bacteriophage HP1, Orf28 vfu_A02526 76d309552b267452b85c1f9603b561e5 967 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 561 592 2.4E-9 T 12-10-2018 IPR008766 Replication gene A protein GO:0006260 vfu_A02526 76d309552b267452b85c1f9603b561e5 967 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 209 493 6.9E-92 T 12-10-2018 IPR008766 Replication gene A protein GO:0006260 vfu_B01507 5a3dd42183c01af179ad3e3f98763493 150 Pfam PF12541 Protein of unknown function (DUF3737) 9 95 1.6E-27 T 12-10-2018 IPR022208 Protein of unknown function DUF3737 vfu_A02504 dadefcd96daba9d7efd28f7fc148d398 628 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 49 388 9.0E-24 T 12-10-2018 IPR010090 Phage tail tape measure protein vfu_A02504 dadefcd96daba9d7efd28f7fc148d398 628 Pfam PF10145 Phage-related minor tail protein 89 283 1.3E-28 T 12-10-2018 IPR010090 Phage tail tape measure protein vfu_A00550 a40fba22c880ab81369a0e5babe7156d 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 7.1E-35 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted vfu_A00550 a40fba22c880ab81369a0e5babe7156d 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 3.9E-34 T 12-10-2018 IPR019886 Sodium symporter small subunit, predicted vfu_B00038 f4a48bf6752b840f3f8ef4de2185ba16 117 Pfam PF11225 Protein of unknown function (DUF3024) 58 116 1.0E-20 T 12-10-2018 IPR021388 Bacteriophage 933W, L0084 vfu_A02857 b1bccaa5214ae42c252b22196c8934b8 162 Pfam PF07811 TadE-like protein 10 52 2.3E-11 T 12-10-2018 IPR012495 TadE-like vfu_A01734 9967ebedaa255f8b7ee430378e5795f6 299 Pfam PF13084 Domain of unknown function (DUF3943) 136 245 2.6E-38 T 12-10-2018 IPR025079 Domain of unknown function DUF3943 vfu_B01357 698857cd356e476b95e3723de1371c12 164 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 1 164 8.7E-57 T 12-10-2018 IPR018636 Protein of unknown function DUF2058 vfu_B00638 2742264c11efd8b7d8c9640ace9c877b 133 Pfam PF12614 Ribosome recycling factor 8 131 1.4E-47 T 12-10-2018 IPR022253 Ribosome recycling factor. bacterial vfu_A02072 6b664000153d573f920ee253c99e613b 388 Pfam PF12698 ABC-2 family transporter protein 18 362 9.9E-41 T 12-10-2018 vfu_A02390 b77334584957af3f3ba4ed32caf04655 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 8.3E-46 T 12-10-2018 IPR018639 Domain of unknown function DUF2062 vfu_A02898 323e3119f51c55f1b451094e92f43953 153 PIRSF PIRSF028680 1 153 2.2E-54 T 12-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 vfu_B01385 f91b00ddf733bca40fd98db7f854abce 591 Pfam PF02687 FtsX-like permease family 499 579 5.7E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 vfu_A01409 e6fa6df6e88182e16f11f5cea452ecc9 146 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 8 142 5.9E-20 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 vfu_A00718 30e0a64fa271b2ab084e34ddac9fa9a4 115 Pfam PF10973 Protein of unknown function (DUF2799) 30 105 2.6E-15 T 12-10-2018 IPR021242 Protein of unknown function DUF2799 vfu_A01261 ecc5ad62e5341d387e3aa4b06c53a9d9 169 Pfam PF10975 Protein of unknown function (DUF2802) 68 135 1.9E-22 T 12-10-2018 IPR021244 Protein of unknown function DUF2802 vfu_A00861 e12e77f1031659c0a58efdd4e61cc2eb 146 Pfam PF06853 Protein of unknown function (DUF1249) 25 137 7.4E-39 T 12-10-2018 IPR009659 Protein of unknown function DUF1249 vfu_B00397 0a27d14399f6f5fd898e4998a12d5ca4 149 Pfam PF05926 Phage head completion protein (GPL) 21 138 1.7E-8 T 12-10-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 vfu_B01303 f78d28c1698d169771325d1a420ff913 169 SUPERFAMILY SSF53850 50 166 8.14E-8 T 12-10-2018 vfu_A02699 63ba4922d8ff4a57e435b30351811b5b 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.2E-138 T 12-10-2018 IPR021936 Protein of unknown function DUF3549 vfu_A00590 c82f4d2f1c5e048e4c94a3b974f9bc41 46 Gene3D G3DSA:3.40.50.300 5 42 8.9E-14 T 12-10-2018 vfu_B01441 dec0db2e7c518a78359a77932ec58208 157 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 12 145 8.5E-26 T 12-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ vfu_A02060 7509cb339e9b0525e677e40d53036499 317 Pfam PF00146 NADH dehydrogenase 16 313 1.4E-50 T 12-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 vfu_A00457 c749d72c2eb878075ee4a5e463c2f32d 131 Pfam PF01757 Acyltransferase family 10 121 4.7E-9 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 vfu_A00396 6da2751919528c00b5342c492cef6e22 342 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 322 1.4E-41 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 vfu_A02084 c5613423e9af9fde4a4b52f5ebc1d1a2 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.7E-32 T 12-10-2018 IPR021284 Protein of unknown function DUF2750 vfu_B00832 36a69bbbc6b3b6ed7197bd131c67e0da 79 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 6 63 5.9E-26 T 12-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system vfu_A02441 f42d48ee7e81a33e694c6b3185bd7f3e 195 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 161 1.1E-22 T 12-10-2018 IPR003846 Uncharacterised protein family UPF0061 vfu_A01808 8497924867a8fa8575043e18945f8d5e 165 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 20 156 1.6E-15 T 12-10-2018 IPR009936 Protein of unknown function DUF1468 vfu_A00409 70873719524ff0dad6e34bc2dd1c66d3 510 Pfam PF02646 RmuC family 181 477 2.1E-104 T 12-10-2018 IPR003798 DNA recombination RmuC