locus-tag	class	description
BSQ33_00010	COG0512	Glutamine amidotransferase of anthranilate synthase
BSQ33_00015	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BSQ33_00025	COG0009	L-threonylcarbamoyladenylate synthase
BSQ33_00030	COG1187	pseudouridine synthase activity
BSQ33_00035	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BSQ33_00040	COG4988	ABC transporter
BSQ33_00045	COG0492	ferredoxin-NADP+ reductase activity
BSQ33_00055	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BSQ33_00065	COG2949	membrane
BSQ33_00075	COG0281	malic enzyme
BSQ33_00085	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BSQ33_00120	COG0247	lactate metabolic process
BSQ33_00120	COG0277	FAD linked oxidase domain protein
BSQ33_00150	COG0417	DNA replication proofreading
BSQ33_00160	COG2197	response regulator
BSQ33_00165	COG0322	excinuclease ABC activity
BSQ33_00170	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BSQ33_00175	COG0390	transport system, permease component
BSQ33_00185	COG4172	Belongs to the ABC transporter superfamily
BSQ33_00195	COG4171	peptide transport system, permease
BSQ33_00200	COG4168	peptide transport system, permease
BSQ33_00210	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BSQ33_00215	COG1842	Phage shock protein A
BSQ33_00225	COG1983	PspC domain protein
BSQ33_00230	COG0626	cystathionine gamma-synthase activity
BSQ33_00245	COG0733	neurotransmitter:sodium symporter activity
BSQ33_00250	COG0564	pseudouridine synthase activity
BSQ33_00255	COG0116	Belongs to the methyltransferase superfamily
BSQ33_00255	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BSQ33_00265	COG3313	Fe-S protein
BSQ33_00275	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BSQ33_00280	COG1061	Type III restriction enzyme res subunit
BSQ33_00285	COG1187	pseudouridine synthase activity
BSQ33_00290	COG2814	Major facilitator Superfamily
BSQ33_00300	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_00305	COG1063	alcohol dehydrogenase
BSQ33_00310	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ33_00320	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ33_00325	COG2186	Transcriptional regulator
BSQ33_00330	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ33_00345	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ33_00355	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ33_00365	COG1802	Transcriptional regulator
BSQ33_00375	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BSQ33_00390	COG2176	DNA-directed DNA polymerase activity
BSQ33_00400	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ33_00410	COG2223	nitrite transmembrane transporter activity
BSQ33_00435	COG4974	Belongs to the 'phage' integrase family
BSQ33_00440	COG2963	transposase activity
BSQ33_00445	COG2801	Transposase and inactivated derivatives
BSQ33_00465	COG0702	epimerase
BSQ33_00470	COG0534	Mate efflux family protein
BSQ33_00475	COG4181	ATPase activity
BSQ33_00485	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BSQ33_00505	COG0019	diaminopimelate decarboxylase activity
BSQ33_00510	COG0840	transmembrane signaling receptor activity
BSQ33_00530	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BSQ33_00540	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BSQ33_00545	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BSQ33_00555	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BSQ33_00560	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ33_00575	COG1846	Transcriptional regulator
BSQ33_00580	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BSQ33_00590	COG0517	IMP dehydrogenase activity
BSQ33_00620	COG1335	isochorismatase
BSQ33_00625	COG4565	transcriptional regulatory protein
BSQ33_00640	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BSQ33_00645	COG3052	prosthetic group binding
BSQ33_00650	COG2301	Belongs to the HpcH HpaI aldolase family
BSQ33_00660	COG3697	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
BSQ33_00665	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
BSQ33_00670	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BSQ33_00675	COG1254	Belongs to the acylphosphatase family
BSQ33_00680	COG2920	part of a sulfur-relay system
BSQ33_00685	COG0670	Belongs to the BI1 family
BSQ33_00690	COG1126	abc transporter atp-binding protein
BSQ33_00695	COG0765	amino acid transport
BSQ33_00700	COG4597	amino acid ABC transporter
BSQ33_00705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_00720	COG1666	GTP binding
BSQ33_00725	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BSQ33_00740	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
BSQ33_00740	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BSQ33_00745	COG1956	GAF domain-containing protein
BSQ33_00750	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
BSQ33_00755	COG0793	Belongs to the peptidase S41A family
BSQ33_00765	COG0308	aminopeptidase N
BSQ33_00795	COG0116	Belongs to the methyltransferase superfamily
BSQ33_00795	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BSQ33_00815	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BSQ33_00820	COG1067	ATP-dependent peptidase activity
BSQ33_00825	COG3120	sequence-specific DNA binding
BSQ33_00835	COG0745	RESPONSE REGULATOR receiver
BSQ33_00835	COG3706	GGDEF domain
BSQ33_00960	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BSQ33_00965	COG3848	Pyruvate phosphate dikinase
BSQ33_00965	COG0574	Belongs to the PEP-utilizing enzyme family
BSQ33_00970	COG0028	Belongs to the TPP enzyme family
BSQ33_00980	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BSQ33_00980	COG1414	Transcriptional regulator
BSQ33_00985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ33_00990	COG0156	8-amino-7-oxononanoate synthase activity
BSQ33_00995	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BSQ33_01000	COG3321	synthase
BSQ33_01015	COG0778	Nitroreductase
BSQ33_01045	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ33_01050	COG0589	response to stress
BSQ33_01055	COG0037	tRNA processing
BSQ33_01075	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ33_01080	COG1177	transmembrane transport
BSQ33_01085	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BSQ33_01095	COG0814	amino acid
BSQ33_01100	COG0004	ammonium transporteR
BSQ33_01110	COG2204	response regulator
BSQ33_01115	COG0746	molybdenum cofactor guanylyltransferase activity
BSQ33_01120	COG1763	Mo-molybdopterin cofactor biosynthetic process
BSQ33_01130	COG0840	transmembrane signaling receptor activity
BSQ33_01145	COG0307	riboflavin synthase, alpha
BSQ33_01155	COG1793	dna ligase
BSQ33_01170	COG0848	biopolymer transport protein
BSQ33_01175	COG0811	peptide transport
BSQ33_01180	COG0811	peptide transport
BSQ33_01190	COG0584	glycerophosphoryl diester phosphodiesterase
BSQ33_01200	COG1115	amino acid carrier protein
BSQ33_01215	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BSQ33_01225	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ33_01235	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ33_01255	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ33_01270	COG0640	Transcriptional regulator
BSQ33_01280	COG0431	NADPH-dependent FMN reductase
BSQ33_01285	COG0798	PFAM Bile acid sodium symporter
BSQ33_01295	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BSQ33_01305	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BSQ33_01310	COG0840	transmembrane signaling receptor activity
BSQ33_01315	COG4580	involved in the transport of maltose and maltodextrins
BSQ33_01320	COG1874	Beta-galactosidase
BSQ33_01330	COG3833	ABC-type maltose transport systems, permease component
BSQ33_01335	COG1175	transmembrane transport
BSQ33_01340	COG2182	Extracellular solute-binding protein
BSQ33_01365	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ33_01375	COG1643	Atp-dependent helicase
BSQ33_01390	COG1309	transcriptional regulator
BSQ33_01400	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ33_01420	COG0443	Heat shock 70 kDa protein
BSQ33_01425	COG0443	Heat shock 70 kDa protein
BSQ33_01440	COG0602	queuosine metabolic process
BSQ33_01445	COG0561	phosphatase activity
BSQ33_01460	COG2079	MmgE PrpD family protein
BSQ33_01465	COG0372	Belongs to the citrate synthase family
BSQ33_01470	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BSQ33_01475	COG2186	Transcriptional regulator
BSQ33_01480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ33_01485	COG3283	Transcriptional regulator of aromatic amino acids metabolism
BSQ33_01490	COG3768	UPF0283 membrane protein
BSQ33_01495	COG3106	COG3106 Predicted ATPase
BSQ33_01535	COG0494	nUDIX hydrolase
BSQ33_01545	COG1760	l-serine dehydratase
BSQ33_01550	COG0720	synthase
BSQ33_01555	COG1017	nitric oxide dioxygenase activity
BSQ33_01555	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BSQ33_01575	COG0646	methionine synthase
BSQ33_01575	COG1410	methionine synthase
BSQ33_01590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_01595	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_01600	COG1120	ATPase activity
BSQ33_01605	COG0583	DNA-binding transcription factor activity
BSQ33_01610	COG4774	siderophore transport
BSQ33_01615	COG0583	DNA-binding transcription factor activity
BSQ33_01625	COG0840	transmembrane signaling receptor activity
BSQ33_01685	COG3209	COG3209 Rhs family protein
BSQ33_01790	COG3209	COG3209 Rhs family protein
BSQ33_01835	COG3501	Rhs element vgr protein
BSQ33_01845	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BSQ33_01855	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BSQ33_01860	COG2181	nitrate reductase activity
BSQ33_01860	COG0247	lactate metabolic process
BSQ33_01865	COG1902	pentaerythritol trinitrate reductase activity
BSQ33_01865	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ33_01890	COG1760	l-serine dehydratase
BSQ33_01920	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BSQ33_01930	COG1448	Aminotransferase
BSQ33_01945	COG0402	S-adenosylhomocysteine deaminase activity
BSQ33_01970	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BSQ33_01970	COG3008	intermembrane lipid transfer
BSQ33_01975	COG2995	paraquat-inducible protein a
BSQ33_01985	COG0837	glucose binding
BSQ33_01995	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BSQ33_02010	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ33_02045	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BSQ33_02075	COG1175	transmembrane transport
BSQ33_02085	COG3842	ATPase activity
BSQ33_02090	COG1640	4-alpha-glucanotransferase
BSQ33_02095	COG0058	SHG alpha-glucan phosphorylase activity
BSQ33_02100	COG2909	trisaccharide binding
BSQ33_02140	COG0784	Response regulator, receiver
BSQ33_02140	COG0835	chemotaxis
BSQ33_02165	COG0583	DNA-binding transcription factor activity
BSQ33_02170	COG2814	Major facilitator Superfamily
BSQ33_02185	COG1538	Outer membrane efflux protein
BSQ33_02205	COG4139	cobalamin transport
BSQ33_02210	COG2988	succinylglutamate desuccinylase activity
BSQ33_02215	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BSQ33_02360	COG2925	Exonuclease
BSQ33_02370	COG1346	cytolysis
BSQ33_02380	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BSQ33_02400	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BSQ33_02430	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ33_02435	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BSQ33_02460	COG1435	thymidine kinase activity
BSQ33_02465	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BSQ33_02470	COG1801	Protein of unknown function DUF72
BSQ33_02475	COG4106	trans-aconitate 2-methyltransferase activity
BSQ33_02480	COG0500	methyltransferase
BSQ33_02485	COG4067	protein conserved in archaea
BSQ33_02485	COG0189	ligase activity
BSQ33_02495	COG0189	ligase activity
BSQ33_02500	COG0463	Glycosyl transferase, family 2
BSQ33_02510	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
BSQ33_02515	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BSQ33_02525	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BSQ33_02530	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BSQ33_02535	COG1609	Transcriptional regulator
BSQ33_02540	COG3070	regulator of competence-specific genes
BSQ33_02545	COG0297	glycogen (starch) synthase activity
BSQ33_02550	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BSQ33_02555	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BSQ33_02565	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BSQ33_02580	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BSQ33_02585	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BSQ33_02590	COG0542	response to heat
BSQ33_02595	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BSQ33_02600	COG1278	Cold shock
BSQ33_02610	COG1187	pseudouridine synthase activity
BSQ33_02615	COG0140	phosphoribosyl-ATP diphosphatase activity
BSQ33_02615	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BSQ33_02625	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BSQ33_02630	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BSQ33_02635	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BSQ33_02635	COG0131	Imidazoleglycerol-phosphate dehydratase
BSQ33_02640	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BSQ33_02645	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BSQ33_02650	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BSQ33_02655	COG1757	Na H antiporter
BSQ33_02660	COG2916	Histone family protein nucleoid-structuring protein H-NS
BSQ33_02665	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_02670	COG0482	sulfurtransferase activity
BSQ33_02680	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BSQ33_02695	COG0501	Belongs to the peptidase M48B family
BSQ33_02700	COG0754	glutathionylspermidine amidase activity
BSQ33_02710	COG1842	Phage shock protein A
BSQ33_02715	COG0137	argininosuccinate synthase activity
BSQ33_02725	COG3766	membrane
BSQ33_02735	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BSQ33_02740	COG2226	methyltransferase
BSQ33_02745	COG0156	8-amino-7-oxononanoate synthase activity
BSQ33_02750	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BSQ33_02790	COG0488	(ABC) transporter
BSQ33_02810	COG2205	protein histidine kinase activity
BSQ33_02815	COG0745	RESPONSE REGULATOR receiver
BSQ33_02825	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BSQ33_02830	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BSQ33_02835	COG0653	protein targeting
BSQ33_02845	COG0745	RESPONSE REGULATOR receiver
BSQ33_02845	COG3706	GGDEF domain
BSQ33_02855	COG4120	Belongs to the binding-protein-dependent transport system permease family
BSQ33_02865	COG3092	negative regulation of chromosome organization
BSQ33_02870	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BSQ33_02875	COG0857	belongs to the CobB CobQ family
BSQ33_02875	COG0280	phosphate acetyltransferase
BSQ33_02880	COG0435	Glutathione S-transferase
BSQ33_02885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_02890	COG1621	beta-fructofuranosidase activity
BSQ33_02900	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_02900	COG1263	PTS System
BSQ33_02910	COG0745	RESPONSE REGULATOR receiver
BSQ33_02920	COG4139	cobalamin transport
BSQ33_02930	COG2204	response regulator
BSQ33_02940	COG3852	Histidine kinase
BSQ33_02950	COG3437	response regulator, receiver
BSQ33_02965	COG0702	epimerase
BSQ33_02975	COG1538	Outer membrane efflux protein
BSQ33_02980	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ33_02985	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ33_02990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ33_02995	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ33_03005	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BSQ33_03010	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BSQ33_03015	COG1984	allophanate hydrolase subunit 2
BSQ33_03020	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BSQ33_03025	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BSQ33_03030	COG2084	Dehydrogenase
BSQ33_03035	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BSQ33_03040	COG3507	Belongs to the glycosyl hydrolase 43 family
BSQ33_03075	COG1280	lysine exporter protein (LysE YggA)
BSQ33_03080	COG4325	translation initiation factor activity
BSQ33_03090	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BSQ33_03105	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_03115	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BSQ33_03125	COG2207	Transcriptional regulator
BSQ33_03125	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BSQ33_03140	COG5297	Belongs to the glycosyl hydrolase family 6
BSQ33_03145	COG1294	oxidase, subunit
BSQ33_03250	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BSQ33_03260	COG2814	Major facilitator Superfamily
BSQ33_03265	COG1917	Cupin 2, conserved barrel domain protein
BSQ33_03265	COG4977	sequence-specific DNA binding
BSQ33_03280	COG5290	Psort location Cytoplasmic, score
BSQ33_03295	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
BSQ33_03325	COG1946	Acyl-CoA thioesterase
BSQ33_03330	COG1522	sequence-specific DNA binding
BSQ33_03340	COG1335	isochorismatase
BSQ33_03365	COG2855	membrane
BSQ33_03375	COG1441	menaquinone biosynthetic process
BSQ33_03380	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BSQ33_03395	COG1169	isochorismate synthase
BSQ33_03400	COG0436	Aminotransferase
BSQ33_03405	COG4172	Belongs to the ABC transporter superfamily
BSQ33_03415	COG0601	transmembrane transport
BSQ33_03420	COG4166	transmembrane transport
BSQ33_03440	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BSQ33_03445	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BSQ33_03455	COG1228	amidohydrolase
BSQ33_03460	COG2986	histidine ammonia-lyase
BSQ33_03500	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_03530	COG1309	transcriptional regulator
BSQ33_03575	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_03580	COG4597	amino acid ABC transporter
BSQ33_03585	COG0765	amino acid transport
BSQ33_03590	COG1126	abc transporter atp-binding protein
BSQ33_03620	COG1280	lysine exporter protein (LysE YggA)
BSQ33_03625	COG0252	asparaginase activity
BSQ33_03630	COG0840	transmembrane signaling receptor activity
BSQ33_03655	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_03660	COG3706	GGDEF domain
BSQ33_03660	COG0745	RESPONSE REGULATOR receiver
BSQ33_03675	COG2272	Belongs to the type-B carboxylesterase lipase family
BSQ33_03695	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ33_03710	COG0601	transmembrane transport
BSQ33_03715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ33_03720	COG0444	Belongs to the ABC transporter superfamily
BSQ33_03730	COG2207	Transcriptional regulator
BSQ33_03730	COG1917	Cupin 2, conserved barrel domain protein
BSQ33_03740	COG2130	NADP-dependent
BSQ33_03755	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BSQ33_03760	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BSQ33_03790	COG0835	chemotaxis
BSQ33_03805	COG0643	Histidine kinase
BSQ33_03805	COG2198	Histidine kinase
BSQ33_03810	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
BSQ33_03825	COG0455	bacterial-type flagellum organization
BSQ33_03840	COG2062	phosphohistidine phosphatase, SixA
BSQ33_03845	COG1025	Belongs to the peptidase M16 family
BSQ33_03850	COG3102	Protein conserved in bacteria
BSQ33_03880	COG1918	ferrous iron import across plasma membrane
BSQ33_03885	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BSQ33_03890	COG1121	(ABC) transporter
BSQ33_03895	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ33_03900	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BSQ33_03905	COG0045	succinate-CoA ligase (ADP-forming) activity
BSQ33_03910	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ33_03915	COG0567	Dehydrogenase, E1 component
BSQ33_03925	COG1053	succinate dehydrogenase
BSQ33_03930	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BSQ33_03935	COG2009	succinate dehydrogenase
BSQ33_03945	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BSQ33_03965	COG0033	Phosphoglucomutase
BSQ33_03970	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
BSQ33_03975	COG0596	Alpha beta hydrolase
BSQ33_03980	COG0716	FMN binding
BSQ33_03985	COG0735	belongs to the Fur family
BSQ33_03990	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BSQ33_03995	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ33_04000	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ33_04005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ33_04005	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BSQ33_04010	COG0431	NADPH-dependent FMN reductase
BSQ33_04020	COG3101	peptidyl-lysine hydroxylation
BSQ33_04025	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BSQ33_04030	COG2890	protein-(glutamine-N5) methyltransferase activity
BSQ33_04045	COG1684	flagellar biosynthetic protein fliR
BSQ33_04050	COG1987	bacterial-type flagellum assembly
BSQ33_04075	COG1580	Controls the rotational direction of flagella during chemotaxis
BSQ33_04100	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BSQ33_04110	COG1677	Flagellar hook-basal body complex protein FliE
BSQ33_04115	COG2204	response regulator
BSQ33_04120	COG4191	Histidine kinase
BSQ33_04125	COG2204	response regulator
BSQ33_04130	COG1516	flagellar protein fliS
BSQ33_04140	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BSQ33_04145	COG1334	flagellar protein FlaG
BSQ33_04155	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ33_04165	COG2837	iron assimilation
BSQ33_04185	COG0577	efflux transmembrane transporter activity
BSQ33_04185	COG1136	(ABC) transporter
BSQ33_04195	COG0577	efflux transmembrane transporter activity
BSQ33_04210	COG0672	)-iron permease
BSQ33_04220	COG1393	Belongs to the ArsC family
BSQ33_04225	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ33_04230	COG1876	peptidase activity
BSQ33_04240	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BSQ33_04245	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ33_04250	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BSQ33_04265	COG4783	chaperone-mediated protein folding
BSQ33_04270	COG1393	Belongs to the ArsC family
BSQ33_04290	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BSQ33_04295	COG0737	Belongs to the 5'-nucleotidase family
BSQ33_04305	COG2912	Transglutaminase-like superfamily
BSQ33_04310	COG3094	Invasion gene expression up-regulator, SirB
BSQ33_04315	COG2890	protein-(glutamine-N5) methyltransferase activity
BSQ33_04320	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BSQ33_04330	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
BSQ33_04335	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BSQ33_04340	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BSQ33_04345	COG0193	aminoacyl-tRNA hydrolase activity
BSQ33_04350	COG0012	GTP binding
BSQ33_04455	COG1705	Flagellar rod assembly protein muramidase FlgJ
BSQ33_04455	COG3951	Flagellar rod assembly protein muramidase FlgJ
BSQ33_04465	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BSQ33_04470	COG4786	Flagellar basal body rod
BSQ33_04475	COG4787	bacterial-type flagellum-dependent cell motility
BSQ33_04480	COG1749	Flagellar hook protein flgE
BSQ33_04485	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BSQ33_04490	COG1558	bacterial-type flagellum-dependent cell motility
BSQ33_04495	COG1815	bacterial-type flagellum-dependent cell motility
BSQ33_04500	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BSQ33_04505	COG0835	chemotaxis
BSQ33_04505	COG0784	Response regulator, receiver
BSQ33_04550	COG3047	cAMP biosynthetic process
BSQ33_04565	COG1846	Transcriptional regulator
BSQ33_04580	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ33_04585	COG2608	mercury ion transmembrane transporter activity
BSQ33_04585	COG2217	Heavy metal translocating P-type atpase
BSQ33_04590	COG3735	TraB family
BSQ33_04600	COG2840	Smr protein MutS2
BSQ33_04605	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BSQ33_04615	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BSQ33_04620	COG1051	belongs to the nudix hydrolase family
BSQ33_04625	COG0121	glutamine amidotransferase
BSQ33_04630	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BSQ33_04635	COG1960	acyl-CoA dehydrogenase activity
BSQ33_04645	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BSQ33_04655	COG2226	methyltransferase
BSQ33_04660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ33_04665	COG1388	LysM domain
BSQ33_04665	COG0741	lytic transglycosylase activity
BSQ33_04690	COG0587	DNA-directed DNA polymerase activity
BSQ33_04695	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BSQ33_04705	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BSQ33_04710	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BSQ33_04715	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BSQ33_04720	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BSQ33_04730	COG0750	zinc metalloprotease
BSQ33_04735	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BSQ33_04740	COG0575	Belongs to the CDS family
BSQ33_04745	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BSQ33_04755	COG0528	UMP kinase activity
BSQ33_04770	COG0024	Methionine aminopeptidase
BSQ33_04775	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BSQ33_04785	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BSQ33_04790	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BSQ33_04815	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BSQ33_04815	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BSQ33_04820	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BSQ33_04825	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BSQ33_04845	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BSQ33_04850	COG2252	PERMEase
BSQ33_04855	COG2195	Cleaves the N-terminal amino acid of tripeptides
BSQ33_04860	COG4067	protein conserved in archaea
BSQ33_04860	COG0189	ligase activity
BSQ33_04865	COG0189	ligase activity
BSQ33_04870	COG0733	neurotransmitter:sodium symporter activity
BSQ33_04875	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BSQ33_04915	COG1805	sodium ion transport
BSQ33_04920	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BSQ33_04925	COG0271	Belongs to the BolA IbaG family
BSQ33_04950	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BSQ33_04960	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BSQ33_04965	COG2166	iron-sulfur cluster assembly
BSQ33_04970	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BSQ33_04975	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BSQ33_04980	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BSQ33_04980	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BSQ33_04990	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ33_04995	COG1074	ATP-dependent DNA helicase activity
BSQ33_05000	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BSQ33_05010	COG3141	response to X-ray
BSQ33_05015	COG2171	N-acyltransferase activity
BSQ33_05025	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BSQ33_05035	COG1609	Transcriptional regulator
BSQ33_05045	COG1022	Amp-dependent synthetase and ligase
BSQ33_05055	COG0583	DNA-binding transcription factor activity
BSQ33_05060	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BSQ33_05065	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BSQ33_05075	COG0560	Phosphoserine phosphatase
BSQ33_05085	COG0813	purine-nucleoside phosphorylase activity
BSQ33_05090	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BSQ33_05095	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BSQ33_05100	COG0084	hydrolase, TatD family'
BSQ33_05105	COG3022	response to hydroperoxide
BSQ33_05110	COG1115	amino acid carrier protein
BSQ33_05125	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BSQ33_05135	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
BSQ33_05140	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BSQ33_05145	COG0083	homoserine kinase activity
BSQ33_05155	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ33_05165	COG0745	RESPONSE REGULATOR receiver
BSQ33_05170	COG2198	Histidine kinase
BSQ33_05170	COG0784	Response regulator, receiver
BSQ33_05170	COG5002	protein histidine kinase activity
BSQ33_05175	COG4251	negative regulation of phosphorylation
BSQ33_05175	COG5001	Diguanylate cyclase
BSQ33_05175	COG2203	Gaf domain
BSQ33_05175	COG3706	GGDEF domain
BSQ33_05180	COG1242	4 iron, 4 sulfur cluster binding
BSQ33_05185	COG0070	glutamate synthase
BSQ33_05185	COG0069	glutamate synthase activity
BSQ33_05185	COG0067	glutamate synthase
BSQ33_05195	COG0070	glutamate synthase
BSQ33_05195	COG0069	glutamate synthase activity
BSQ33_05195	COG0067	glutamate synthase
BSQ33_05200	COG0493	'glutamate synthase
BSQ33_05205	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BSQ33_05215	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BSQ33_05220	COG2860	membrane
BSQ33_05225	COG0583	DNA-binding transcription factor activity
BSQ33_05230	COG0730	response to heat
BSQ33_05240	COG0505	Belongs to the CarA family
BSQ33_05245	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BSQ33_05250	COG0494	nUDIX hydrolase
BSQ33_05255	COG0653	protein targeting
BSQ33_05270	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BSQ33_05275	COG0849	cell division
BSQ33_05280	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BSQ33_05285	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BSQ33_05290	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BSQ33_05295	COG0772	Belongs to the SEDS family
BSQ33_05300	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BSQ33_05305	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BSQ33_05310	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BSQ33_05315	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BSQ33_05320	COG0768	penicillin binding
BSQ33_05325	COG3116	cell division
BSQ33_05330	COG0275	rRNA processing
BSQ33_05340	COG0534	Mate efflux family protein
BSQ33_05345	COG0583	DNA-binding transcription factor activity
BSQ33_05350	COG0840	transmembrane signaling receptor activity
BSQ33_05355	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BSQ33_05360	COG3107	peptidoglycan biosynthetic process
BSQ33_05365	COG0792	nuclease activity
BSQ33_05370	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BSQ33_05375	COG2823	Periplasmic or secreted lipoprotein
BSQ33_05390	COG2969	positive regulation of protein catabolic process
BSQ33_05395	COG0625	glutathione transferase activity
BSQ33_05400	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BSQ33_05410	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BSQ33_05415	COG3105	Protein conserved in bacteria
BSQ33_05420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ33_05425	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ33_05440	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BSQ33_05450	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BSQ33_05455	COG4137	Cytochrome C assembly protein
BSQ33_05460	COG4536	flavin adenine dinucleotide binding
BSQ33_05470	COG2918	glutathione biosynthetic process
BSQ33_05475	COG0612	Peptidase, M16
BSQ33_05480	COG1238	metal cluster binding
BSQ33_05485	COG1063	alcohol dehydrogenase
BSQ33_05490	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BSQ33_05495	COG5016	pyruvate
BSQ33_05495	COG0511	ligase activity, forming carbon-carbon bonds
BSQ33_05500	COG3630	sodium ion export across plasma membrane
BSQ33_05535	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BSQ33_05540	COG0527	aspartate kinase activity
BSQ33_05545	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BSQ33_05550	COG2137	regulation of response to DNA damage stimulus
BSQ33_05555	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BSQ33_05560	COG1546	Belongs to the CinA family
BSQ33_05565	COG1414	Transcriptional regulator
BSQ33_05570	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_05575	COG1917	Cupin 2, conserved barrel domain protein
BSQ33_05590	COG0800	Aldolase
BSQ33_05595	COG0534	Mate efflux family protein
BSQ33_05610	COG3842	ATPase activity
BSQ33_05615	COG0395	ABC-type sugar transport system, permease component
BSQ33_05620	COG1175	transmembrane transport
BSQ33_05640	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BSQ33_05645	COG0823	Involved in the tonB-independent uptake of proteins
BSQ33_05655	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BSQ33_05660	COG0784	Response regulator, receiver
BSQ33_05660	COG3437	response regulator, receiver
BSQ33_05665	COG4191	Histidine kinase
BSQ33_05665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_05675	COG5297	Belongs to the glycosyl hydrolase family 6
BSQ33_05680	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BSQ33_05685	COG1388	LysM domain
BSQ33_05685	COG4942	peptidase
BSQ33_05695	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BSQ33_05700	COG0585	pseudouridine synthase activity
BSQ33_05710	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BSQ33_05715	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BSQ33_05720	COG1968	undecaprenyl-diphosphatase activity
BSQ33_05725	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BSQ33_05730	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BSQ33_05735	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BSQ33_05745	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BSQ33_05755	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BSQ33_05760	COG1610	YqeY-like protein
BSQ33_05765	COG0358	DNA primase activity
BSQ33_05770	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BSQ33_05830	COG1368	sulfuric ester hydrolase activity
BSQ33_05835	COG0604	alcohol dehydrogenase
BSQ33_05890	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BSQ33_06015	COG2204	response regulator
BSQ33_06025	COG0840	transmembrane signaling receptor activity
BSQ33_06035	COG3119	arylsulfatase activity
BSQ33_06045	COG0641	radical SAM
BSQ33_06050	COG3119	arylsulfatase activity
BSQ33_06060	COG3119	arylsulfatase activity
BSQ33_06065	COG0641	radical SAM
BSQ33_06075	COG2149	membrane
BSQ33_06095	COG2190	(PTS) system
BSQ33_06095	COG1263	PTS System
BSQ33_06095	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_06100	COG0840	transmembrane signaling receptor activity
BSQ33_06115	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BSQ33_06120	COG1349	DNA-binding transcription factor activity
BSQ33_06125	COG0469	pyruvate kinase activity
BSQ33_06135	COG0668	transmembrane transport
BSQ33_06145	COG0126	phosphoglycerate kinase activity
BSQ33_06150	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BSQ33_06155	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BSQ33_06160	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BSQ33_06165	COG3091	SprT-like family
BSQ33_06170	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BSQ33_06175	COG0189	ligase activity
BSQ33_06180	COG1678	Uncharacterized ACR, COG1678
BSQ33_06185	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BSQ33_06195	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BSQ33_06200	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BSQ33_06205	COG0762	integral membrane protein
BSQ33_06210	COG1872	DUF167
BSQ33_06220	COG3437	response regulator, receiver
BSQ33_06225	COG2205	protein histidine kinase activity
BSQ33_06225	COG4999	Histidine kinase
BSQ33_06225	COG3437	response regulator, receiver
BSQ33_06225	COG3850	Histidine kinase
BSQ33_06245	COG1366	Belongs to the anti-sigma-factor antagonist family
BSQ33_06255	COG3040	lipid binding
BSQ33_06350	COG3501	Rhs element vgr protein
BSQ33_06355	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BSQ33_06360	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BSQ33_06370	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BSQ33_06375	COG1194	a g-specific adenine glycosylase
BSQ33_06380	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BSQ33_06385	COG0741	lytic transglycosylase activity
BSQ33_06450	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BSQ33_06455	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BSQ33_06460	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ33_06465	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BSQ33_06480	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BSQ33_06490	COG3610	response to peptide
BSQ33_06495	COG2966	Psort location CytoplasmicMembrane, score
BSQ33_06500	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BSQ33_06505	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BSQ33_06515	COG0142	geranyltranstransferase activity
BSQ33_06520	COG0039	L-malate dehydrogenase activity
BSQ33_06525	COG1438	arginine binding
BSQ33_06540	COG0589	response to stress
BSQ33_06555	COG2186	Transcriptional regulator
BSQ33_06565	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ33_06580	COG0246	Mannitol dehydrogenase
BSQ33_06590	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_06595	COG0800	Aldolase
BSQ33_06620	COG0583	DNA-binding transcription factor activity
BSQ33_06640	COG0312	modulator of DNA gyrase
BSQ33_06645	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BSQ33_06650	COG3164	Protein of unknown function
BSQ33_06655	COG1530	ribonuclease E activity
BSQ33_06660	COG0424	maF-like protein
BSQ33_06665	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BSQ33_06670	COG1792	Involved in formation and maintenance of cell shape
BSQ33_06675	COG1077	Cell shape determining protein MreB Mrl
BSQ33_06680	COG2199	diguanylate cyclase activity
BSQ33_06680	COG2200	EAL domain
BSQ33_06685	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BSQ33_06690	COG0375	protein maturation
BSQ33_06695	COG0309	Hydrogenase expression formation protein (HypE)
BSQ33_06705	COG0298	carbon dioxide binding
BSQ33_06710	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BSQ33_06730	COG3383	formate dehydrogenase (NAD+) activity
BSQ33_06735	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BSQ33_06740	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BSQ33_06750	COG3260	NADH ubiquinone oxidoreductase 20
BSQ33_06760	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BSQ33_06760	COG3261	NADH dehydrogenase
BSQ33_06765	COG0651	ATP synthesis coupled electron transport
BSQ33_06770	COG4237	Hydrogenase 4 membrane
BSQ33_06775	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BSQ33_06780	COG0650	Formate hydrogenlyase subunit 4
BSQ33_06785	COG0651	ATP synthesis coupled electron transport
BSQ33_06790	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BSQ33_06795	COG0527	aspartate kinase activity
BSQ33_06800	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BSQ33_06810	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BSQ33_06825	COG0629	single-stranded DNA binding
BSQ33_06830	COG1410	methionine synthase
BSQ33_06830	COG0646	methionine synthase
BSQ33_06910	COG0175	sulfate reduction
BSQ33_06915	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BSQ33_06920	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BSQ33_06955	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BSQ33_06990	COG0735	belongs to the Fur family
BSQ33_07005	COG0432	Pfam Uncharacterised protein family UPF0047
BSQ33_07010	COG0305	Participates in initiation and elongation during chromosome replication
BSQ33_07020	COG0359	binds to the 23S rRNA
BSQ33_07025	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BSQ33_07030	COG2965	DNA replication, synthesis of RNA primer
BSQ33_07035	COG0360	Binds together with S18 to 16S ribosomal RNA
BSQ33_07050	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BSQ33_07055	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BSQ33_07060	COG0049	tRNA binding
BSQ33_07080	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BSQ33_07085	COG2964	Protein conserved in bacteria
BSQ33_07090	COG0545	Peptidyl-prolyl cis-trans isomerase
BSQ33_07105	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BSQ33_07110	COG0330	HflC and HflK could
BSQ33_07115	COG0330	HflC and HflK could
BSQ33_07120	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BSQ33_07125	COG1923	regulation of RNA biosynthetic process
BSQ33_07130	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BSQ33_07135	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BSQ33_07140	COG0860	N-Acetylmuramoyl-L-alanine amidase
BSQ33_07145	COG0802	atpase or kinase
BSQ33_07150	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BSQ33_07180	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BSQ33_07185	COG1162	GTPase activity
BSQ33_07190	COG0688	phosphatidylethanolamine metabolic process
BSQ33_07205	COG0471	metal ion transport
BSQ33_07215	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BSQ33_07220	COG4942	peptidase
BSQ33_07230	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BSQ33_07235	COG2816	NAD+ diphosphatase activity
BSQ33_07240	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BSQ33_07245	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BSQ33_07250	COG0085	RNA polymerase activity
BSQ33_07260	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BSQ33_07275	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BSQ33_07280	COG0250	Participates in transcription elongation, termination and antitermination
BSQ33_07285	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BSQ33_07290	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BSQ33_07315	COG1072	(Pantothenic acid kinase))
BSQ33_07325	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BSQ33_07335	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BSQ33_07350	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BSQ33_07360	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BSQ33_07365	COG3118	belongs to the thioredoxin family
BSQ33_07370	COG0513	Belongs to the DEAD box helicase family
BSQ33_07375	COG0248	Ppx GppA phosphatase
BSQ33_07380	COG0784	Response regulator, receiver
BSQ33_07380	COG2205	protein histidine kinase activity
BSQ33_07380	COG2198	Histidine kinase
BSQ33_07385	COG2814	Major facilitator Superfamily
BSQ33_07405	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ33_07415	COG0511	ligase activity, forming carbon-carbon bonds
BSQ33_07420	COG0439	Biotin carboxylase
BSQ33_07425	COG2264	protein methyltransferase activity
BSQ33_07470	COG0583	DNA-binding transcription factor activity
BSQ33_07475	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_07480	COG1733	regulation of RNA biosynthetic process
BSQ33_07490	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BSQ33_07495	COG0583	DNA-binding transcription factor activity
BSQ33_07535	COG0151	Belongs to the GarS family
BSQ33_07545	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ33_07550	COG2183	response to ionizing radiation
BSQ33_07560	COG0596	Alpha beta hydrolase
BSQ33_07565	COG1040	competence protein
BSQ33_07575	COG0494	nUDIX hydrolase
BSQ33_07580	COG1218	3'(2'),5'-bisphosphate nucleotidase
BSQ33_07590	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BSQ33_07595	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
BSQ33_07600	COG3156	type II secretion system protein K
BSQ33_07605	COG4795	General secretion pathway protein
BSQ33_07610	COG2165	general secretion pathway protein
BSQ33_07615	COG2165	general secretion pathway protein
BSQ33_07620	COG2165	general secretion pathway protein
BSQ33_07625	COG1459	type II secretion system
BSQ33_07630	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BSQ33_07640	COG3031	protein transport across the cell outer membrane
BSQ33_07645	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BSQ33_07650	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BSQ33_07655	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BSQ33_07665	COG0456	acetyltransferase
BSQ33_07685	COG0174	glutamine synthetase
BSQ33_07690	COG3852	Histidine kinase
BSQ33_07695	COG2204	response regulator
BSQ33_07765	COG4206	TonB-dependent receptor
BSQ33_07770	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BSQ33_07775	COG0523	cobalamin synthesis protein
BSQ33_07790	COG0523	cobalamin synthesis protein
BSQ33_07795	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ33_07800	COG1121	(ABC) transporter
BSQ33_07815	COG1132	(ABC) transporter
BSQ33_07820	COG1309	transcriptional regulator
BSQ33_07835	COG3501	Rhs element vgr protein
BSQ33_07885	COG3501	Rhs element vgr protein
BSQ33_07935	COG3501	Rhs element vgr protein
BSQ33_08055	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BSQ33_08060	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BSQ33_08070	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BSQ33_08075	COG2937	Belongs to the GPAT DAPAT family
BSQ33_08080	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BSQ33_08085	COG3161	chorismate lyase activity
BSQ33_08110	COG2177	Part of the ABC transporter FtsEX involved in
BSQ33_08115	COG2884	Cell division ATP-binding protein ftsE
BSQ33_08120	COG0552	protein localization to endoplasmic reticulum
BSQ33_08125	COG0742	ribosomal rna small subunit methyltransferase
BSQ33_08130	COG2095	MarC family integral membrane protein
BSQ33_08150	COG0783	Belongs to the Dps family
BSQ33_08155	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BSQ33_08160	COG1280	lysine exporter protein (LysE YggA)
BSQ33_08165	COG2267	carboxylic ester hydrolase activity
BSQ33_08170	COG0561	phosphatase activity
BSQ33_08175	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BSQ33_08185	COG2977	Belongs to the P-Pant transferase superfamily
BSQ33_08210	COG1011	Hydrolase
BSQ33_08215	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BSQ33_08230	COG0019	diaminopimelate decarboxylase activity
BSQ33_08245	COG3072	Adenylate cyclase
BSQ33_08260	COG2959	enzyme of heme biosynthesis
BSQ33_08265	COG3071	HemY protein
BSQ33_08270	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BSQ33_08295	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BSQ33_08300	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ33_08300	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ33_08310	COG0084	hydrolase, TatD family'
BSQ33_08315	COG0805	protein transport
BSQ33_08320	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BSQ33_08325	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BSQ33_08330	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BSQ33_08335	COG3165	ubiquinone biosynthetic process from chorismate
BSQ33_08340	COG2226	methyltransferase
BSQ33_08370	COG2160	L-arabinose isomerase activity
BSQ33_08380	COG1069	ribulokinase activity
BSQ33_08385	COG1879	ABC-type sugar transport system periplasmic component
BSQ33_08390	COG1129	ABC transporter
BSQ33_08395	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ33_08410	COG2329	Antibiotic biosynthesis monooxygenase
BSQ33_08425	COG0583	DNA-binding transcription factor activity
BSQ33_08440	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BSQ33_08445	COG0028	Belongs to the TPP enzyme family
BSQ33_08450	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BSQ33_08450	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BSQ33_08475	COG0702	epimerase
BSQ33_08495	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BSQ33_08500	COG1518	maintenance of DNA repeat elements
BSQ33_08500	COG1468	defense response to virus
BSQ33_08555	COG2081	HI0933 family
BSQ33_08565	COG1528	Iron-storage protein
BSQ33_08575	COG0697	spore germination
BSQ33_08585	COG0742	ribosomal rna small subunit methyltransferase
BSQ33_08590	COG1522	sequence-specific DNA binding
BSQ33_08600	COG0006	proline dipeptidase activity
BSQ33_08630	COG4175	Glycine betaine
BSQ33_08635	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BSQ33_08645	COG2104	thiamine diphosphate biosynthetic process
BSQ33_08650	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BSQ33_08665	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BSQ33_08670	COG3940	Belongs to the glycosyl hydrolase 43 family
BSQ33_08715	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
BSQ33_08720	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ33_08725	COG1739	Uncharacterized protein family UPF0029
BSQ33_08745	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BSQ33_08750	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BSQ33_08755	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BSQ33_08770	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BSQ33_08780	COG0356	it plays a direct role in the translocation of protons across the membrane
BSQ33_08790	COG1475	DNA binding
BSQ33_08795	COG1192	Involved in chromosome partitioning
BSQ33_08805	COG0445	tRNA wobble uridine modification
BSQ33_08815	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BSQ33_08840	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BSQ33_08845	COG0706	membrane insertase activity
BSQ33_08850	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BSQ33_08855	COG0594	ribonuclease P activity
BSQ33_08865	COG1126	abc transporter atp-binding protein
BSQ33_08885	COG0592	DNA-directed DNA polymerase activity
BSQ33_08895	COG0187	DNA topoisomerase II activity
BSQ33_08915	COG1280	lysine exporter protein (LysE YggA)
BSQ33_08950	COG0071	Belongs to the small heat shock protein (HSP20) family
BSQ33_08960	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
BSQ33_08970	COG3977	Valine--pyruvate aminotransferase
BSQ33_08980	COG0439	Biotin carboxylase
BSQ33_09010	COG0751	glycine-tRNA ligase activity
BSQ33_09015	COG0752	glycyl-tRNA synthetase alpha subunit
BSQ33_09020	COG2119	membrane
BSQ33_09045	COG0425	Belongs to the sulfur carrier protein TusA family
BSQ33_09060	COG0129	dihydroxy-acid dehydratase activity
BSQ33_09065	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ33_09070	COG3978	acetolactate synthase activity
BSQ33_09080	COG0606	chelatase, subunit chli
BSQ33_09085	COG0204	Acyl-transferase
BSQ33_09090	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BSQ33_09095	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BSQ33_09100	COG0840	transmembrane signaling receptor activity
BSQ33_09105	COG3084	Protein conserved in bacteria
BSQ33_09110	COG4326	sporulation control protein
BSQ33_09115	COG1272	protein, Hemolysin III
BSQ33_09120	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ33_09125	COG0569	domain protein
BSQ33_09130	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BSQ33_09130	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BSQ33_09145	COG0758	DNA mediated transformation
BSQ33_09155	COG0551	DNA topoisomerase type I activity
BSQ33_09160	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BSQ33_09165	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BSQ33_09170	COG0009	L-threonylcarbamoyladenylate synthase
BSQ33_09190	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BSQ33_09225	COG0840	transmembrane signaling receptor activity
BSQ33_09230	COG0583	DNA-binding transcription factor activity
BSQ33_09240	COG2960	long-chain fatty acid transporting porin activity
BSQ33_09245	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ33_09250	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ33_09290	COG4172	Belongs to the ABC transporter superfamily
BSQ33_09295	COG0747	negative chemotaxis
BSQ33_09305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ33_09315	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BSQ33_09320	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ33_09325	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ33_09330	COG1129	ABC transporter
BSQ33_09335	COG1879	ABC-type sugar transport system periplasmic component
BSQ33_09345	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BSQ33_09350	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BSQ33_09365	COG0210	DNA helicase
BSQ33_09380	COG0405	Gamma-glutamyltransferase
BSQ33_09385	COG1280	lysine exporter protein (LysE YggA)
BSQ33_09390	COG2962	Rard protein
BSQ33_09395	COG0514	ATP-dependent DNA helicase (RecQ)
BSQ33_09415	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BSQ33_09420	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BSQ33_09425	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BSQ33_09430	COG2723	6-phospho-beta-galactosidase activity
BSQ33_09435	COG1447	Phosphotransferase system cellobiose-specific component IIA
BSQ33_09440	COG1609	Transcriptional regulator
BSQ33_09470	COG1682	transport, permease protein
BSQ33_09485	COG1216	Glycosyl transferase, family 2
BSQ33_09485	COG1442	glycosyl transferase family 8
BSQ33_09490	COG0562	UDP-galactopyranose mutase
BSQ33_09505	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ33_09615	COG2003	Belongs to the UPF0758 family
BSQ33_09635	COG1561	YicC-like family, N-terminal region
BSQ33_09640	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BSQ33_09645	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BSQ33_09650	COG1560	Kdo2-lipid A biosynthetic process
BSQ33_09655	COG1560	Kdo2-lipid A biosynthetic process
BSQ33_09660	COG1309	transcriptional regulator
BSQ33_09665	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BSQ33_09675	COG2003	Belongs to the UPF0758 family
BSQ33_09685	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BSQ33_09705	COG0859	PFAM glycosyl transferase family 9
BSQ33_09710	COG0463	Glycosyl transferase, family 2
BSQ33_09715	COG0859	PFAM glycosyl transferase family 9
BSQ33_09720	COG3642	lipopolysaccharide core region biosynthetic process
BSQ33_09735	COG1519	Transferase
BSQ33_09755	COG0859	PFAM glycosyl transferase family 9
BSQ33_09770	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ33_09790	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BSQ33_09800	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ33_09835	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BSQ33_09850	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ33_09880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ33_09920	COG3068	Protein conserved in bacteria
BSQ33_09925	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ33_09930	COG1573	uracil-dna glycosylase
BSQ33_09935	COG0776	regulation of translation
BSQ33_09950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ33_09955	COG0745	RESPONSE REGULATOR receiver
BSQ33_09960	COG2205	protein histidine kinase activity
BSQ33_09965	COG2814	Major facilitator Superfamily
BSQ33_09985	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BSQ33_09990	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BSQ33_10000	COG0194	GDP metabolic process
BSQ33_10010	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BSQ33_10015	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BSQ33_10030	COG4232	protein-disulfide reductase activity
BSQ33_10040	COG1027	Aspartate ammonia-lyase
BSQ33_10045	COG3447	MASE1 domain protein
BSQ33_10045	COG5001	Diguanylate cyclase
BSQ33_10045	COG5002	protein histidine kinase activity
BSQ33_10050	COG3030	protein affecting phage T7 exclusion by the F plasmid
BSQ33_10055	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BSQ33_10060	COG2205	protein histidine kinase activity
BSQ33_10065	COG0745	RESPONSE REGULATOR receiver
BSQ33_10075	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BSQ33_10085	COG0205	6-phosphofructokinase activity
BSQ33_10090	COG1494	fructose-1,6-bisphosphatase
BSQ33_10100	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BSQ33_10105	COG0527	aspartate kinase activity
BSQ33_10105	COG0460	homoserine dehydrogenase
BSQ33_10110	COG0626	cystathionine gamma-synthase activity
BSQ33_10125	COG0281	malic enzyme
BSQ33_10130	COG0254	rRNA binding
BSQ33_10135	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BSQ33_10140	COG1609	Transcriptional regulator
BSQ33_10150	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BSQ33_10155	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BSQ33_10160	COG1575	Belongs to the MenA family. Type 1 subfamily
BSQ33_10170	COG0534	Mate efflux family protein
BSQ33_10175	COG0149	triose-phosphate isomerase activity
BSQ33_10195	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ33_10200	COG0459	protein refolding
BSQ33_10205	COG1119	ATPase activity
BSQ33_10210	COG1509	lysine 2,3-aminomutase activity
BSQ33_10220	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
BSQ33_10230	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BSQ33_10235	COG1053	succinate dehydrogenase
BSQ33_10240	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
BSQ33_10245	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BSQ33_10250	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BSQ33_10255	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BSQ33_10260	COG1045	serine acetyltransferase
BSQ33_10265	COG1695	Transcriptional regulator
BSQ33_10270	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BSQ33_10275	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ33_10280	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BSQ33_10285	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BSQ33_10290	COG0137	argininosuccinate synthase activity
BSQ33_10310	COG0678	peroxiredoxin activity
BSQ33_10310	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BSQ33_10320	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ33_10345	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BSQ33_10360	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BSQ33_10365	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BSQ33_10375	COG0180	Tryptophanyl-tRNA synthetase
BSQ33_10380	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ33_10390	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BSQ33_10410	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BSQ33_10425	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ33_10435	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ33_10445	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BSQ33_10450	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_10455	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_10485	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BSQ33_10500	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ33_10505	COG3954	Phosphoribulokinase
BSQ33_10515	COG0429	hydrolase of the alpha beta-hydrolase fold
BSQ33_10525	COG0488	(ABC) transporter
BSQ33_10530	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ33_10545	COG1047	Peptidyl-prolyl cis-trans
BSQ33_10550	COG1446	asparaginase
BSQ33_10555	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BSQ33_10560	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BSQ33_10565	COG0557	exoribonuclease II activity
BSQ33_10570	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BSQ33_10575	COG0051	transcription antitermination factor activity, RNA binding
BSQ33_10580	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BSQ33_10600	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BSQ33_10605	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BSQ33_10630	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BSQ33_10635	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BSQ33_10650	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BSQ33_10655	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BSQ33_10680	COG0201	protein transport
BSQ33_10690	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BSQ33_10695	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BSQ33_10710	COG0203	ribosomal protein L17
BSQ33_10720	COG0545	Peptidyl-prolyl cis-trans isomerase
BSQ33_10730	COG2153	protein acetylation
BSQ33_10740	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BSQ33_10740	COG1648	precorrin-2 dehydrogenase activity
BSQ33_10750	COG2895	sulfate adenylyltransferase (ATP) activity
BSQ33_10755	COG0490	domain, Protein
BSQ33_10755	COG0471	metal ion transport
BSQ33_10780	COG1136	(ABC) transporter
BSQ33_10800	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ33_10805	COG0729	surface antigen
BSQ33_10810	COG2911	Protein conserved in bacteria
BSQ33_10815	COG2105	PFAM AIG2 family protein
BSQ33_10820	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BSQ33_10830	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BSQ33_10835	COG0163	prenyltransferase activity
BSQ33_10840	COG4143	(ABC) transporter
BSQ33_10845	COG1178	ABC-type Fe3 transport system permease component
BSQ33_10850	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BSQ33_10855	COG3028	Belongs to the UPF0307 family
BSQ33_10860	COG0312	modulator of DNA gyrase
BSQ33_10885	COG2239	Acts as a magnesium transporter
BSQ33_10890	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_10900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_10905	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BSQ33_10915	COG1137	ATPase activity
BSQ33_10930	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BSQ33_10935	COG0517	IMP dehydrogenase activity
BSQ33_10935	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BSQ33_10945	COG1127	ABC transporter
BSQ33_10950	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BSQ33_10955	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BSQ33_10960	COG2854	intermembrane phospholipid transfer
BSQ33_10970	COG5007	Belongs to the BolA IbaG family
BSQ33_10975	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BSQ33_10980	COG0204	Acyl-transferase
BSQ33_10985	COG0251	oxidation-reduction process
BSQ33_10990	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BSQ33_11000	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BSQ33_11020	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BSQ33_11040	COG0564	pseudouridine synthase activity
BSQ33_11045	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ33_11050	COG4269	membrane
BSQ33_11055	COG0501	Belongs to the peptidase M48B family
BSQ33_11060	COG0525	valine-tRNA ligase activity
BSQ33_11065	COG2927	DNA polymerase III (CHI subunit)
BSQ33_11070	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BSQ33_11075	COG0795	lipopolysaccharide-transporting ATPase activity
BSQ33_11080	COG0795	lipopolysaccharide-transporting ATPase activity
BSQ33_11115	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BSQ33_11165	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BSQ33_11170	COG0473	3-isopropylmalate dehydrogenase activity
BSQ33_11190	COG0583	DNA-binding transcription factor activity
BSQ33_11195	COG0028	Belongs to the TPP enzyme family
BSQ33_11205	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ33_11210	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BSQ33_11215	COG1012	belongs to the aldehyde dehydrogenase family
BSQ33_11220	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ33_11230	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ33_11235	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ33_11240	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BSQ33_11245	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BSQ33_11255	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BSQ33_11265	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ33_11270	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ33_11285	COG0354	folic acid binding
BSQ33_11290	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BSQ33_11300	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BSQ33_11315	COG3026	antisigma factor binding
BSQ33_11320	COG3086	response to oxidative stress
BSQ33_11330	COG0681	Belongs to the peptidase S26 family
BSQ33_11335	COG0571	ribonuclease III activity
BSQ33_11340	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BSQ33_11345	COG1381	Involved in DNA repair and RecF pathway recombination
BSQ33_11350	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BSQ33_11355	COG0736	holo-[acyl-carrier-protein] synthase activity
BSQ33_11360	COG2205	protein histidine kinase activity
BSQ33_11360	COG4999	Histidine kinase
BSQ33_11360	COG3850	Histidine kinase
BSQ33_11360	COG3437	response regulator, receiver
BSQ33_11365	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BSQ33_11370	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BSQ33_11375	COG3956	TIGRFAM MazG family protein
BSQ33_11380	COG0504	CTP synthase activity
BSQ33_11390	COG0617	tRNA 3'-terminal CCA addition
BSQ33_11395	COG4991	sh3 domain protein
BSQ33_11400	COG0306	phosphate transporter
BSQ33_11405	COG1392	Phosphate transport regulator
BSQ33_11410	COG3025	triphosphatase activity
BSQ33_11420	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BSQ33_11425	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BSQ33_11425	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
BSQ33_11430	COG1538	Outer membrane efflux protein
BSQ33_11435	COG0494	nUDIX hydrolase
BSQ33_11440	COG3151	Protein conserved in bacteria
BSQ33_11450	COG3150	esterase
BSQ33_11455	COG0187	DNA topoisomerase II activity
BSQ33_11460	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BSQ33_11475	COG3220	belongs to the UPF0276 family
BSQ33_11490	COG1595	DNA-templated transcription, initiation
BSQ33_11495	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BSQ33_11500	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
BSQ33_11505	COG0237	dephospho-CoA kinase activity
BSQ33_11515	COG1459	type II secretion system
BSQ33_11520	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BSQ33_11535	COG0157	Belongs to the NadC ModD family
BSQ33_11545	COG0716	FMN binding
BSQ33_11555	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BSQ33_11560	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BSQ33_11565	COG2186	Transcriptional regulator
BSQ33_11570	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BSQ33_11575	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ33_11580	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BSQ33_11595	COG0288	reversible hydration of carbon dioxide
BSQ33_11600	COG1131	(ABC) transporter
BSQ33_11605	COG0842	Transport permease protein
BSQ33_11615	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ33_11620	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ33_11625	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ33_11640	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BSQ33_11645	COG1414	Transcriptional regulator
BSQ33_11650	COG3623	hexulose-6-phosphate isomerase
BSQ33_11655	COG1129	ABC transporter
BSQ33_11660	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ33_11685	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BSQ33_11690	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BSQ33_11695	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BSQ33_11705	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ33_11710	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BSQ33_11715	COG1489	DNA binding
BSQ33_11720	COG1643	Atp-dependent helicase
BSQ33_11725	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BSQ33_11735	COG3112	Uncharacterised protein family (UPF0231)
BSQ33_11745	COG0004	ammonium transporteR
BSQ33_11755	COG0628	permease
BSQ33_11760	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BSQ33_11765	COG0316	Belongs to the HesB IscA family
BSQ33_11770	COG0739	heme binding
BSQ33_11775	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BSQ33_11780	COG2027	D-alanyl-D-alanine carboxypeptidase
BSQ33_11785	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BSQ33_11790	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ33_11795	COG1534	Rna-binding protein
BSQ33_11800	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BSQ33_11805	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BSQ33_11810	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BSQ33_11820	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BSQ33_11835	COG0779	Required for maturation of 30S ribosomal subunits
BSQ33_11840	COG0195	Participates in both transcription termination and antitermination
BSQ33_11855	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BSQ33_11870	COG4785	May be involved in cell division
BSQ33_11875	COG0534	Mate efflux family protein
BSQ33_11900	COG3153	acetyltransferase
BSQ33_11910	COG0456	acetyltransferase
BSQ33_11915	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BSQ33_11950	COG1216	Glycosyl transferase, family 2
BSQ33_11950	COG1442	glycosyl transferase family 8
BSQ33_11955	COG0438	transferase activity, transferring glycosyl groups
BSQ33_11960	COG1045	serine acetyltransferase
BSQ33_11965	COG0438	transferase activity, transferring glycosyl groups
BSQ33_11985	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BSQ33_12005	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BSQ33_12010	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BSQ33_12025	COG0745	RESPONSE REGULATOR receiver
BSQ33_12045	COG0513	Belongs to the DEAD box helicase family
BSQ33_12050	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BSQ33_12070	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BSQ33_12075	COG2204	response regulator
BSQ33_12085	COG0667	Aldo Keto reductase
BSQ33_12090	COG3066	DNA modification
BSQ33_12095	COG0494	nUDIX hydrolase
BSQ33_12105	COG0730	response to heat
BSQ33_12110	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BSQ33_12120	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BSQ33_12125	COG0583	DNA-binding transcription factor activity
BSQ33_12130	COG0640	Transcriptional regulator
BSQ33_12140	COG0728	peptidoglycan biosynthetic process
BSQ33_12145	COG0196	riboflavin kinase activity
BSQ33_12155	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BSQ33_12160	COG1047	Peptidyl-prolyl cis-trans
BSQ33_12165	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BSQ33_12170	COG1966	Carbon starvation protein
BSQ33_12180	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BSQ33_12185	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BSQ33_12195	COG3279	Response regulator of the LytR AlgR family
BSQ33_12200	COG3275	phosphorelay sensor kinase activity
BSQ33_12205	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BSQ33_12210	COG0287	Prephenate dehydrogenase
BSQ33_12210	COG1605	Chorismate mutase
BSQ33_12220	COG0488	(ABC) transporter
BSQ33_12225	COG0741	lytic transglycosylase activity
BSQ33_12230	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
BSQ33_12245	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
BSQ33_12250	COG5001	Diguanylate cyclase
BSQ33_12255	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BSQ33_12260	COG1605	Chorismate mutase
BSQ33_12260	COG0077	Prephenate dehydratase
BSQ33_12265	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BSQ33_12270	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ33_12275	COG0564	pseudouridine synthase activity
BSQ33_12285	COG0542	response to heat
BSQ33_12425	COG4974	Belongs to the 'phage' integrase family
BSQ33_12445	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BSQ33_12460	COG0745	RESPONSE REGULATOR receiver
BSQ33_12465	COG5002	protein histidine kinase activity
BSQ33_12475	COG0248	Ppx GppA phosphatase
BSQ33_12480	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BSQ33_12490	COG0581	inorganic phosphate transmembrane transporter activity
BSQ33_12495	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BSQ33_12500	COG0704	Plays a role in the regulation of phosphate uptake
BSQ33_12505	COG0450	alkyl hydroperoxide reductase
BSQ33_12510	COG0583	DNA-binding transcription factor activity
BSQ33_12515	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BSQ33_12525	COG0516	GMP reductase activity
BSQ33_12525	COG0517	IMP dehydrogenase activity
BSQ33_12530	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BSQ33_12540	COG1862	Preprotein translocase
BSQ33_12545	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BSQ33_12550	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BSQ33_12555	COG0483	inositol monophosphate 1-phosphatase activity
BSQ33_12560	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BSQ33_12565	COG1959	2 iron, 2 sulfur cluster binding
BSQ33_12570	COG1104	cysteine desulfurase activity
BSQ33_12575	COG0822	iron-sulfur transferase activity
BSQ33_12580	COG0316	Belongs to the HesB IscA family
BSQ33_12595	COG0633	Ferredoxin
BSQ33_12600	COG2975	iron-sulfur cluster assembly
BSQ33_12610	COG0105	UTP biosynthetic process
BSQ33_12615	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BSQ33_12620	COG1426	Protein conserved in bacteria
BSQ33_12625	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BSQ33_12630	COG0124	histidyl-tRNA synthetase
BSQ33_12635	COG2976	Protein conserved in bacteria
BSQ33_12640	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ33_12645	COG1160	GTP binding
BSQ33_12660	COG0516	GMP reductase activity
BSQ33_12660	COG0517	IMP dehydrogenase activity
BSQ33_12700	COG2801	Transposase and inactivated derivatives
BSQ33_12705	COG2963	transposase activity
BSQ33_12715	COG0583	DNA-binding transcription factor activity
BSQ33_12740	COG2169	Transcriptional regulator
BSQ33_12740	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BSQ33_12750	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ33_12750	COG2755	lipolytic protein G-D-S-L family
BSQ33_12770	COG1725	Transcriptional regulator
BSQ33_12785	COG1349	DNA-binding transcription factor activity
BSQ33_12795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_12800	COG0738	Major facilitator superfamily
BSQ33_12815	COG0477	Major facilitator Superfamily
BSQ33_12835	COG0583	DNA-binding transcription factor activity
BSQ33_12845	COG2814	Major facilitator Superfamily
BSQ33_12850	COG0789	Transcriptional regulator
BSQ33_12855	COG0454	-acetyltransferase
BSQ33_12860	COG1538	Outer membrane efflux protein
BSQ33_12865	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ33_12870	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ33_12880	COG5002	protein histidine kinase activity
BSQ33_12885	COG1115	amino acid carrier protein
BSQ33_12900	COG3623	hexulose-6-phosphate isomerase
BSQ33_12905	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BSQ33_12910	COG0561	phosphatase activity
BSQ33_12920	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_12940	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_12950	COG2207	Transcriptional regulator
BSQ33_12960	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_12960	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_12960	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_13045	COG2192	nodulation
BSQ33_13080	COG2501	S4 domain
BSQ33_13090	COG0840	transmembrane signaling receptor activity
BSQ33_13095	COG3711	transcriptional antiterminator
BSQ33_13105	COG0641	radical SAM
BSQ33_13175	COG1053	succinate dehydrogenase
BSQ33_13175	COG3976	FMN-binding domain protein
BSQ33_13175	COG0431	NADPH-dependent FMN reductase
BSQ33_13180	COG1053	succinate dehydrogenase
BSQ33_13180	COG0431	NADPH-dependent FMN reductase
BSQ33_13180	COG3976	FMN-binding domain protein
BSQ33_13185	COG0583	DNA-binding transcription factor activity
BSQ33_13195	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BSQ33_13200	COG2205	protein histidine kinase activity
BSQ33_13205	COG0745	RESPONSE REGULATOR receiver
BSQ33_13210	COG0569	domain protein
BSQ33_13215	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ33_13225	COG0596	Alpha beta hydrolase
BSQ33_13245	COG2867	negative regulation of translational initiation
BSQ33_13250	COG2914	Belongs to the UPF0125 (RnfH) family
BSQ33_13255	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ33_13265	COG0497	DNA recombination
BSQ33_13275	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BSQ33_13290	COG0443	Heat shock 70 kDa protein
BSQ33_13330	COG0583	DNA-binding transcription factor activity
BSQ33_13335	COG0590	tRNA wobble adenosine to inosine editing
BSQ33_13340	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BSQ33_13350	COG0686	Belongs to the AlaDH PNT family
BSQ33_13360	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BSQ33_13385	COG0442	prolyl-tRNA aminoacylation
BSQ33_13390	COG1720	tRNA m6t6A37 methyltransferase activity
BSQ33_13395	COG1671	Belongs to the UPF0178 family
BSQ33_13420	COG3098	single-species biofilm formation
BSQ33_13425	COG0564	pseudouridine synthase activity
BSQ33_13430	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BSQ33_13435	COG0142	geranyltranstransferase activity
BSQ33_13445	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BSQ33_13455	COG4989	oxidoreductase activity
BSQ33_13460	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BSQ33_13460	COG0301	tRNA thio-modification
BSQ33_13465	COG0583	DNA-binding transcription factor activity
BSQ33_13480	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
BSQ33_13485	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ33_13490	COG1611	Belongs to the LOG family
BSQ33_13515	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
BSQ33_13520	COG1464	Belongs to the NlpA lipoprotein family
BSQ33_13525	COG2011	ABC-type metal ion transport system permease component
BSQ33_13530	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BSQ33_13535	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BSQ33_13545	COG1263	PTS System
BSQ33_13545	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_13550	COG0366	Alpha amylase catalytic
BSQ33_13565	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BSQ33_13580	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BSQ33_13600	COG1686	Belongs to the peptidase S11 family
BSQ33_13605	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BSQ33_13610	COG0772	Belongs to the SEDS family
BSQ33_13615	COG0768	penicillin binding
BSQ33_13620	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BSQ33_13625	COG0799	negative regulation of ribosome biogenesis
BSQ33_13630	COG1466	dna polymerase III delta subunit
BSQ33_13635	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
BSQ33_13650	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BSQ33_13655	COG4535	Mg2 and Co2 transporter CorC
BSQ33_13660	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BSQ33_13665	COG1702	phosphate starvation-inducible protein PhoH
BSQ33_13675	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ33_13680	COG2190	(PTS) system
BSQ33_13685	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BSQ33_13690	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_13695	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BSQ33_13700	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
BSQ33_13705	COG3115	cell septum assembly
BSQ33_13710	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BSQ33_13715	COG0789	Transcriptional regulator
BSQ33_13720	COG3118	belongs to the thioredoxin family
BSQ33_13725	COG0300	oxidoreductase activity
BSQ33_13730	COG1090	epimerase
BSQ33_13765	COG3710	Transcriptional regulator
BSQ33_13770	COG0326	Molecular chaperone. Has ATPase activity
BSQ33_13775	COG0563	adenylate kinase activity
BSQ33_13780	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BSQ33_13790	COG0367	asparagine synthase
BSQ33_13795	COG1940	carbohydrate kinase activity
BSQ33_13795	COG1846	Transcriptional regulator
BSQ33_13800	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ33_13810	COG0101	tRNA pseudouridine synthase activity
BSQ33_13815	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BSQ33_13820	COG0285	dihydrofolate synthase activity
BSQ33_13825	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BSQ33_13830	COG1286	toxin biosynthetic process
BSQ33_13835	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BSQ33_13840	COG2056	Na+-H+ antiporter family
BSQ33_13845	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BSQ33_13855	COG0346	lactoylglutathione lyase activity
BSQ33_13860	COG2186	Transcriptional regulator
BSQ33_13865	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BSQ33_13870	COG4660	Part of a membrane complex involved in electron transport
BSQ33_13875	COG4659	FMN binding
BSQ33_13880	COG4658	electron transport chain
BSQ33_13885	COG4656	Part of a membrane complex involved in electron transport
BSQ33_13890	COG2878	Part of a membrane complex involved in electron transport
BSQ33_13895	COG4657	Part of a membrane complex involved in electron transport
BSQ33_13900	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_13910	COG3527	Alpha-acetolactate decarboxylase
BSQ33_13930	COG0556	nucleotide-excision repair
BSQ33_13935	COG2204	response regulator
BSQ33_13940	COG2198	Histidine kinase
BSQ33_13945	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BSQ33_13950	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BSQ33_13955	COG0521	Mo-molybdopterin cofactor biosynthetic process
BSQ33_13965	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BSQ33_13970	COG0314	molybdopterin synthase activity
BSQ33_13990	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BSQ33_13990	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BSQ33_13995	COG0489	protein tyrosine kinase activity
BSQ33_14000	COG0572	uridine kinase
BSQ33_14015	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BSQ33_14025	COG0183	Belongs to the thiolase family
BSQ33_14030	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ33_14030	COG1024	Enoyl-CoA hydratase
BSQ33_14035	COG0778	Nitroreductase
BSQ33_14040	COG0583	DNA-binding transcription factor activity
BSQ33_14045	COG0745	RESPONSE REGULATOR receiver
BSQ33_14050	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BSQ33_14105	COG2801	Transposase and inactivated derivatives
BSQ33_14125	COG3083	sulfuric ester hydrolase activity
BSQ33_14135	COG3081	Nucleoid-associated protein
BSQ33_14140	COG3248	Nucleoside-binding outer membrane protein
BSQ33_14150	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BSQ33_14155	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ33_14160	COG1012	belongs to the aldehyde dehydrogenase family
BSQ33_14160	COG1454	alcohol dehydrogenase
BSQ33_14165	COG0659	secondary active sulfate transmembrane transporter activity
BSQ33_14170	COG1530	ribonuclease E activity
BSQ33_14175	COG0564	pseudouridine synthase activity
BSQ33_14180	COG0424	maF-like protein
BSQ33_14185	COG1399	metal-binding, possibly nucleic acid-binding protein
BSQ33_14200	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BSQ33_14230	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BSQ33_14235	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BSQ33_14240	COG0470	DNA polymerase III
BSQ33_14245	COG0084	hydrolase, TatD family'
BSQ33_14250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_14250	COG1263	PTS System
BSQ33_14260	COG0733	neurotransmitter:sodium symporter activity
BSQ33_14265	COG4667	esterase of the alpha-beta hydrolase superfamily
BSQ33_14270	COG0469	pyruvate kinase activity
BSQ33_14275	COG1940	carbohydrate kinase activity
BSQ33_14280	COG0784	Response regulator, receiver
BSQ33_14280	COG0835	chemotaxis
BSQ33_14285	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_14290	COG0616	signal peptide processing
BSQ33_14310	COG0789	Transcriptional regulator
BSQ33_14315	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BSQ33_14320	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BSQ33_14330	COG3866	Pectate lyase
BSQ33_14340	COG2271	Major facilitator Superfamily
BSQ33_14350	COG1349	DNA-binding transcription factor activity
BSQ33_14355	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BSQ33_14365	COG4565	transcriptional regulatory protein
BSQ33_14370	COG3290	protein histidine kinase activity
BSQ33_14375	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BSQ33_14380	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
BSQ33_14390	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BSQ33_14395	COG1053	succinate dehydrogenase
BSQ33_14415	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ33_14420	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BSQ33_14420	COG0574	Belongs to the PEP-utilizing enzyme family
BSQ33_14475	COG4145	pantothenate transmembrane transporter activity
BSQ33_14485	COG1879	ABC-type sugar transport system periplasmic component
BSQ33_14500	COG0840	transmembrane signaling receptor activity
BSQ33_14510	COG2226	methyltransferase
BSQ33_14515	COG0676	glucose-6-phosphate 1-epimerase activity
BSQ33_14520	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BSQ33_14525	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ33_14535	COG3139	Protein of unknown function (DUF1315)
BSQ33_14540	COG0252	asparaginase activity
BSQ33_14545	COG0616	signal peptide processing
BSQ33_14550	COG0788	formyltetrahydrofolate deformylase activity
BSQ33_14560	COG1199	ATP-dependent helicase activity
BSQ33_14565	COG1214	PFAM Peptidase M22, glycoprotease
BSQ33_14580	COG0596	Alpha beta hydrolase
BSQ33_14585	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ33_14590	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BSQ33_14595	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BSQ33_14600	COG2894	cell division
BSQ33_14610	COG3100	YcgL domain-containing protein
BSQ33_14615	COG2951	lytic endotransglycosylase activity
BSQ33_14655	COG2373	Large extracellular alpha-helical protein
BSQ33_14660	COG4953	penicillin-binding protein 1C
BSQ33_14665	COG4628	conserved protein (DUF2132)
BSQ33_14675	COG0662	Cupin 2, conserved barrel domain protein
BSQ33_14715	COG2169	Transcriptional regulator
BSQ33_14715	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BSQ33_14730	COG1940	carbohydrate kinase activity
BSQ33_14730	COG1846	Transcriptional regulator
BSQ33_14735	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BSQ33_14740	COG0363	glucosamine-6-phosphate deaminase activity
BSQ33_14745	COG1263	PTS System
BSQ33_14745	COG2190	(PTS) system
BSQ33_14745	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_14755	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ33_14760	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ33_14765	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ33_14770	COG0740	serine-type endopeptidase activity
BSQ33_14780	COG4191	Histidine kinase
BSQ33_14800	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BSQ33_14805	COG0776	regulation of translation
BSQ33_14810	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ33_14815	COG1555	photosystem II stabilization
BSQ33_14845	COG0539	negative regulation of cytoplasmic translation
BSQ33_14855	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BSQ33_14860	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BSQ33_14865	COG0284	orotidine-5'-phosphate decarboxylase activity
BSQ33_14890	COG1522	sequence-specific DNA binding
BSQ33_14895	COG1674	ftsk spoiiie
BSQ33_14900	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BSQ33_14910	COG2186	Transcriptional regulator
BSQ33_14920	COG0537	adenosine 5'-monophosphoramidase activity
BSQ33_14950	COG1252	NADH dehydrogenase
BSQ33_14955	COG0601	transmembrane transport
BSQ33_15000	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BSQ33_15010	COG4591	ABC-type transport system involved in lipoprotein release permease component
BSQ33_15015	COG1136	(ABC) transporter
BSQ33_15020	COG4591	ABC-type transport system involved in lipoprotein release permease component
BSQ33_15030	COG0658	competence protein
BSQ33_15030	COG2333	competence protein COMEC
BSQ33_15035	COG1132	(ABC) transporter
BSQ33_15040	COG1663	tetraacyldisaccharide 4'-kinase activity
BSQ33_15050	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BSQ33_15055	COG2719	SpoVR family
BSQ33_15060	COG2718	Belongs to the UPF0229 family
BSQ33_15065	COG2766	serine protein kinase
BSQ33_15070	COG3013	Belongs to the UPF0304 family
BSQ33_15075	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BSQ33_15085	COG1882	Formate acetyltransferase
BSQ33_15090	COG0708	Exodeoxyribonuclease III
BSQ33_15100	COG3923	Primosomal replication protein n
BSQ33_15105	COG0730	response to heat
BSQ33_15110	COG1199	ATP-dependent helicase activity
BSQ33_15115	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BSQ33_15120	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BSQ33_15125	COG3012	SEC-C Motif Domain Protein
BSQ33_15135	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BSQ33_15140	COG0215	cysteine-tRNA ligase activity
BSQ33_15145	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BSQ33_15150	COG0632	four-way junction helicase activity
BSQ33_15155	COG2255	four-way junction helicase activity
BSQ33_15160	COG1271	oxidase subunit
BSQ33_15165	COG1294	oxidase, subunit
BSQ33_15170	COG4890	Cyd operon protein YbgT
BSQ33_15175	COG3790	cyd operon protein YbgE
BSQ33_15180	COG0824	Thioesterase
BSQ33_15185	COG0811	peptide transport
BSQ33_15205	COG2885	chlorophyll binding
BSQ33_15210	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BSQ33_15215	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BSQ33_15255	COG0604	alcohol dehydrogenase
BSQ33_15260	COG3976	FMN-binding domain protein
BSQ33_15260	COG1053	succinate dehydrogenase
BSQ33_15260	COG0431	NADPH-dependent FMN reductase
BSQ33_15270	COG2814	Major facilitator Superfamily
BSQ33_15280	COG0471	metal ion transport
BSQ33_15285	COG4565	transcriptional regulatory protein
BSQ33_15290	COG2828	Protein conserved in bacteria
BSQ33_15320	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BSQ33_15325	COG4774	siderophore transport
BSQ33_15325	COG1629	transport
BSQ33_15330	COG2382	esterase
BSQ33_15345	COG1120	ATPase activity
BSQ33_15350	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_15355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_15365	COG4592	Periplasmic binding protein
BSQ33_15370	COG1535	isochorismatase
BSQ33_15370	COG3433	isochorismatase activity
BSQ33_15375	COG1021	2,3-dihydroxybenzoate-AMP ligase
BSQ33_15380	COG1169	isochorismate synthase
BSQ33_15385	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_15390	COG1609	Transcriptional regulator
BSQ33_15400	COG3414	Phosphotransferase system galactitol-specific IIB component
BSQ33_15410	COG3591	Belongs to the peptidase S1B family
BSQ33_15420	COG2423	ornithine cyclodeaminase activity
BSQ33_15445	COG3501	Rhs element vgr protein
BSQ33_15465	COG3501	Rhs element vgr protein
BSQ33_15530	COG0583	DNA-binding transcription factor activity
BSQ33_15535	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ33_15540	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BSQ33_15545	COG3842	ATPase activity
BSQ33_15560	COG1840	ABC-type Fe3 transport system, periplasmic component
BSQ33_15565	COG1609	Transcriptional regulator
BSQ33_15575	COG0739	heme binding
BSQ33_15585	COG1342	Belongs to the UPF0251 family
BSQ33_15595	COG1132	(ABC) transporter
BSQ33_15600	COG1132	(ABC) transporter
BSQ33_15610	COG0569	domain protein
BSQ33_15615	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ33_15625	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BSQ33_15635	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BSQ33_15640	COG1737	Transcriptional regulator
BSQ33_15645	COG0076	glutamate decarboxylase activity
BSQ33_15655	COG3070	regulator of competence-specific genes
BSQ33_15670	COG4191	Histidine kinase
BSQ33_15680	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BSQ33_15685	COG1032	radical SAM domain protein
BSQ33_15700	COG1522	sequence-specific DNA binding
BSQ33_15710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_15715	COG0765	amino acid transport
BSQ33_15720	COG1126	abc transporter atp-binding protein
BSQ33_15725	COG0583	DNA-binding transcription factor activity
BSQ33_15735	COG2350	Protein conserved in bacteria
BSQ33_15740	COG1607	acyl-coa hydrolase
BSQ33_15750	COG1301	dicarboxylic acid transport
BSQ33_15755	COG0159	tryptophan synthase activity
BSQ33_15760	COG0133	tryptophan synthase activity
BSQ33_15765	COG0134	indole-3-glycerol-phosphate synthase activity
BSQ33_15765	COG0135	phosphoribosylanthranilate isomerase activity
BSQ33_15770	COG0513	Belongs to the DEAD box helicase family
BSQ33_15775	COG0840	transmembrane signaling receptor activity
BSQ33_15780	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BSQ33_15785	COG0573	inorganic phosphate transmembrane transporter activity
BSQ33_15790	COG0581	inorganic phosphate transmembrane transporter activity
BSQ33_15825	COG0739	heme binding
BSQ33_15830	COG5001	Diguanylate cyclase
BSQ33_15840	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BSQ33_15845	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
BSQ33_15850	COG2814	Major facilitator Superfamily
BSQ33_15860	COG0667	Aldo Keto reductase
BSQ33_15865	COG0583	DNA-binding transcription factor activity
BSQ33_15870	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ33_15890	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ33_15895	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BSQ33_15910	COG2190	(PTS) system
BSQ33_15910	COG1263	PTS System
BSQ33_15910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_15915	COG2190	(PTS) system
BSQ33_15915	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_15915	COG1263	PTS System
BSQ33_15925	COG2723	6-phospho-beta-galactosidase activity
BSQ33_15945	COG2095	MarC family integral membrane protein
BSQ33_15955	COG3250	beta-galactosidase activity
BSQ33_15965	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BSQ33_15970	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BSQ33_15975	COG1447	Phosphotransferase system cellobiose-specific component IIA
BSQ33_15980	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_15980	COG3711	transcriptional antiterminator
BSQ33_15985	COG1979	alcohol dehydrogenase
BSQ33_16000	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BSQ33_16010	COG2855	membrane
BSQ33_16020	COG0534	Mate efflux family protein
BSQ33_16035	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BSQ33_16050	COG0784	Response regulator, receiver
BSQ33_16050	COG5002	protein histidine kinase activity
BSQ33_16050	COG2205	protein histidine kinase activity
BSQ33_16065	COG1765	OsmC-like protein
BSQ33_16075	COG2354	Protein conserved in bacteria
BSQ33_16105	COG2204	response regulator
BSQ33_16220	COG0418	dihydroorotase activity
BSQ33_16225	COG3217	Mosc domain protein beta barrel domain protein
BSQ33_16225	COG3217	Mosc domain protein beta barrel domain protein
BSQ33_16225	COG0633	Ferredoxin
BSQ33_16225	COG0633	Ferredoxin
BSQ33_16255	COG0840	transmembrane signaling receptor activity
BSQ33_16260	COG0646	methionine synthase
BSQ33_16260	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BSQ33_16270	COG0840	transmembrane signaling receptor activity
BSQ33_16340	COG0456	acetyltransferase
BSQ33_16355	COG0189	ligase activity
BSQ33_16355	COG0569	domain protein
BSQ33_16360	COG0456	acetyltransferase
BSQ33_16375	COG0363	glucosamine-6-phosphate deaminase activity
BSQ33_16380	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BSQ33_16385	COG3437	response regulator, receiver
BSQ33_16390	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BSQ33_16400	COG2991	Protein conserved in bacteria
BSQ33_16405	COG0673	inositol 2-dehydrogenase activity
BSQ33_16415	COG1064	alcohol dehydrogenase
BSQ33_16420	COG4305	rare lipoprotein A
BSQ33_16435	COG1012	belongs to the aldehyde dehydrogenase family
BSQ33_16440	COG3724	N-succinylarginine dihydrolase activity
BSQ33_16445	COG2988	succinylglutamate desuccinylase activity
BSQ33_16450	COG3706	GGDEF domain
BSQ33_16455	COG5002	protein histidine kinase activity
BSQ33_16490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ33_16500	COG0156	8-amino-7-oxononanoate synthase activity
BSQ33_16505	COG0784	Response regulator, receiver
BSQ33_16505	COG2205	protein histidine kinase activity
BSQ33_16515	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BSQ33_16515	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BSQ33_16520	COG0509	glycine decarboxylation via glycine cleavage system
BSQ33_16530	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ33_16535	COG5001	Diguanylate cyclase
BSQ33_16535	COG3300	MHYT domain
BSQ33_16550	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BSQ33_16555	COG0840	transmembrane signaling receptor activity
BSQ33_16560	COG1609	Transcriptional regulator
BSQ33_16575	COG0395	ABC-type sugar transport system, permease component
BSQ33_16580	COG2723	6-phospho-beta-galactosidase activity
BSQ33_16585	COG3842	ATPase activity
BSQ33_16590	COG3459	Glycosyltransferase 36 associated
BSQ33_16600	COG1609	Transcriptional regulator
BSQ33_16640	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BSQ33_16650	COG4181	ATPase activity
BSQ33_16660	COG2095	MarC family integral membrane protein
BSQ33_16705	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ33_16710	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BSQ33_16730	COG2425	protein containing a von Willebrand factor type A (vWA) domain
BSQ33_16735	COG3713	MltA-interacting MipA family protein
BSQ33_16740	COG1584	GPR1 FUN34 yaaH family protein
BSQ33_16745	COG0625	glutathione transferase activity
BSQ33_16775	COG0494	nUDIX hydrolase
BSQ33_16780	COG0678	peroxiredoxin activity
BSQ33_16810	COG1879	ABC-type sugar transport system periplasmic component
BSQ33_16815	COG0784	Response regulator, receiver
BSQ33_16815	COG5002	protein histidine kinase activity
BSQ33_16825	COG1492	cobalamin metabolic process
BSQ33_16840	COG1289	transmembrane transporter activity
BSQ33_16845	COG0210	DNA helicase
BSQ33_16850	COG1803	Methylglyoxal synthase
BSQ33_16855	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BSQ33_16870	COG0183	Belongs to the thiolase family
BSQ33_16885	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BSQ33_16890	COG0523	cobalamin synthesis protein
BSQ33_16895	COG0038	chloride channel
BSQ33_16900	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BSQ33_16910	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
BSQ33_16915	COG0513	Belongs to the DEAD box helicase family
BSQ33_16920	COG2723	6-phospho-beta-galactosidase activity
BSQ33_16930	COG1063	alcohol dehydrogenase
BSQ33_16940	COG5001	Diguanylate cyclase
BSQ33_16940	COG3300	MHYT domain
BSQ33_16945	COG2816	NAD+ diphosphatase activity
BSQ33_16950	COG0488	(ABC) transporter
BSQ33_16955	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BSQ33_16965	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BSQ33_16990	COG2909	trisaccharide binding
BSQ33_17000	COG3507	Belongs to the glycosyl hydrolase 43 family
BSQ33_17010	COG1518	maintenance of DNA repeat elements
BSQ33_17015	COG3153	acetyltransferase
BSQ33_17015	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BSQ33_17025	COG0513	Belongs to the DEAD box helicase family
BSQ33_17030	COG0513	Belongs to the DEAD box helicase family
BSQ33_17045	COG0243	molybdopterin cofactor binding
BSQ33_17060	COG3634	alkyl hydroperoxide reductase activity
BSQ33_17065	COG0450	alkyl hydroperoxide reductase
BSQ33_17070	COG1063	alcohol dehydrogenase
BSQ33_17075	COG2211	Major facilitator Superfamily
BSQ33_17080	COG1397	ADP-ribosylglycohydrolase
BSQ33_17085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_17090	COG2188	Transcriptional regulator
BSQ33_17105	COG0640	Transcriptional regulator
BSQ33_17120	COG1328	CTP reductase activity
BSQ33_17125	COG0602	queuosine metabolic process
BSQ33_17135	COG1538	Outer membrane efflux protein
BSQ33_17145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ33_17160	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BSQ33_17170	COG0402	S-adenosylhomocysteine deaminase activity
BSQ33_17175	COG2351	hydroxyisourate hydrolase activity
BSQ33_17215	COG1129	ABC transporter
BSQ33_17220	COG1309	transcriptional regulator
BSQ33_17225	COG0840	transmembrane signaling receptor activity
BSQ33_17235	COG3300	MHYT domain
BSQ33_17235	COG5001	Diguanylate cyclase
BSQ33_17270	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BSQ33_17270	COG1918	ferrous iron import across plasma membrane
BSQ33_17290	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ33_17295	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ33_17300	COG0471	metal ion transport
BSQ33_17305	COG3964	amidohydrolase
BSQ33_17315	COG2169	Transcriptional regulator
BSQ33_17325	COG1960	acyl-CoA dehydrogenase activity
BSQ33_17350	COG3706	GGDEF domain
BSQ33_17365	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BSQ33_17370	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BSQ33_17405	COG0023	Translation Initiation Factor
BSQ33_17420	COG1181	Belongs to the D-alanine--D-alanine ligase family
BSQ33_17430	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ33_17430	COG1042	CoA-binding domain protein
BSQ33_17430	COG0045	succinate-CoA ligase (ADP-forming) activity
BSQ33_17435	COG0583	DNA-binding transcription factor activity
BSQ33_17440	COG4533	DNA binding
BSQ33_17445	COG2050	protein possibly involved in aromatic compounds catabolism
BSQ33_17450	COG2824	Alkylphosphonate utilization operon protein PhnA
BSQ33_17460	COG0737	Belongs to the 5'-nucleotidase family
BSQ33_17465	COG3593	DNA synthesis involved in DNA repair
BSQ33_17480	COG2353	YceI-like domain
BSQ33_17485	COG3038	cytochrome b561
BSQ33_17500	COG4172	Belongs to the ABC transporter superfamily
BSQ33_17505	COG4239	(ABC) transporter, permease
BSQ33_17510	COG4174	ABC transporter (Permease)
BSQ33_17515	COG4166	transmembrane transport
BSQ33_17520	COG1051	belongs to the nudix hydrolase family
BSQ33_17535	COG1011	Hydrolase
BSQ33_17545	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BSQ33_17555	COG0302	gtp cyclohydrolase
BSQ33_17565	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BSQ33_17570	COG2897	thiosulfate sulfurtransferase activity
BSQ33_17580	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BSQ33_17585	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BSQ33_17595	COG0545	Peptidyl-prolyl cis-trans isomerase
BSQ33_17600	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ33_17785	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BSQ33_17790	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BSQ33_17795	COG1522	sequence-specific DNA binding
BSQ33_17810	COG1121	(ABC) transporter
BSQ33_17820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ33_17825	COG2985	domain, Protein
BSQ33_17835	COG1609	Transcriptional regulator
BSQ33_17840	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ33_17845	COG1879	ABC-type sugar transport system periplasmic component
BSQ33_17850	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ33_17855	COG1129	ABC transporter
BSQ33_17870	COG3757	hydrolase, family 25
BSQ33_17870	COG3409	Peptidoglycan-binding domain 1 protein
BSQ33_17905	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BSQ33_17910	COG1518	maintenance of DNA repeat elements
BSQ33_17940	COG1203	CRISPR-associated helicase, Cas3
BSQ33_17970	COG3501	Rhs element vgr protein
BSQ33_17995	COG2828	Protein conserved in bacteria
BSQ33_18005	COG0642	Histidine kinase
BSQ33_18010	COG0745	RESPONSE REGULATOR receiver
BSQ33_18025	COG1609	Transcriptional regulator
BSQ33_18040	COG1105	Belongs to the carbohydrate kinase PfkB family
BSQ33_18045	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_18045	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_18045	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BSQ33_18050	COG3693	PFAM glycoside hydrolase, family 10
BSQ33_18060	COG1929	Belongs to the glycerate kinase type-1 family
BSQ33_18075	COG1902	pentaerythritol trinitrate reductase activity
BSQ33_18075	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ33_18085	COG4251	negative regulation of phosphorylation
BSQ33_18105	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BSQ33_18110	COG3104	oligopeptide transport
BSQ33_18115	COG1070	Carbohydrate kinase
BSQ33_18120	COG1609	Transcriptional regulator
BSQ33_18120	COG2207	Transcriptional regulator
BSQ33_18125	COG2814	Major facilitator Superfamily
BSQ33_18125	COG0477	Major facilitator Superfamily
BSQ33_18130	COG2115	Belongs to the xylose isomerase family
BSQ33_18175	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BSQ33_18195	COG1737	Transcriptional regulator
BSQ33_18200	COG1126	abc transporter atp-binding protein
BSQ33_18205	COG0765	amino acid transport
BSQ33_18210	COG0765	amino acid transport
BSQ33_18215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_18220	COG1953	Uracil, thiamine, allantoin
BSQ33_18260	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BSQ33_18265	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_18270	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BSQ33_18285	COG3711	transcriptional antiterminator
BSQ33_18290	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BSQ33_18290	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BSQ33_18310	COG3210	domain, Protein
BSQ33_18320	COG0419	ATPase involved in DNA repair
BSQ33_18350	COG0454	-acetyltransferase
BSQ33_18355	COG0454	-acetyltransferase
BSQ33_18385	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ33_18390	COG0659	secondary active sulfate transmembrane transporter activity
BSQ33_18400	COG3706	GGDEF domain
BSQ33_18400	COG0745	RESPONSE REGULATOR receiver
BSQ33_18435	COG2017	converts alpha-aldose to the beta-anomer
BSQ33_18455	COG1566	PFAM secretion protein HlyD family protein
BSQ33_18460	COG1289	transmembrane transporter activity
BSQ33_18470	COG4412	M6 family metalloprotease domain protein
BSQ33_18470	COG3291	Pkd domain containing protein
BSQ33_18480	COG2211	Major facilitator Superfamily
BSQ33_18490	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BSQ33_18500	COG3477	response to acidic pH
BSQ33_18505	COG1012	belongs to the aldehyde dehydrogenase family
BSQ33_18510	COG3284	Transcriptional regulator
BSQ33_18530	COG0681	Belongs to the peptidase S26 family
BSQ33_18535	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BSQ33_18535	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BSQ33_18545	COG4106	trans-aconitate 2-methyltransferase activity
BSQ33_18565	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ33_18570	COG0242	peptide deformylase activity
BSQ33_18575	COG4115	mRNA cleavage
BSQ33_18580	COG2161	toxin-antitoxin pair type II binding
BSQ33_18610	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BSQ33_18650	COG1942	4-Oxalocrotonate Tautomerase
BSQ33_18680	COG1349	DNA-binding transcription factor activity
BSQ33_18685	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_18695	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_18700	COG3731	PTS system glucitol sorbitol-specific IIA component
BSQ33_18710	COG3730	PTS system glucitol sorbitol-specific
BSQ33_18745	COG0076	glutamate decarboxylase activity
BSQ33_18755	COG2207	Transcriptional regulator
BSQ33_18765	COG0747	negative chemotaxis
BSQ33_18770	COG0601	transmembrane transport
BSQ33_18775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ33_18780	COG0444	Belongs to the ABC transporter superfamily
BSQ33_18800	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ33_18810	COG1278	Cold shock
BSQ33_18825	COG2194	sulfuric ester hydrolase activity
BSQ33_18830	COG1122	ATPase activity
BSQ33_18875	COG2875	Belongs to the precorrin methyltransferase family
BSQ33_18885	COG2241	protein methyltransferase activity
BSQ33_18890	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
BSQ33_18930	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BSQ33_18980	COG1309	transcriptional regulator
BSQ33_18985	COG0251	oxidation-reduction process
BSQ33_18990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BSQ33_18995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_19000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_19005	COG1120	ATPase activity
BSQ33_19020	COG0840	transmembrane signaling receptor activity
BSQ33_19030	COG1357	PFAM Pentapeptide repeats (8 copies)
BSQ33_19045	COG0384	phenazine biosynthesis protein PhzF
BSQ33_19075	COG0549	Belongs to the carbamate kinase family
BSQ33_19080	COG0531	amino acid
BSQ33_19085	COG2957	Belongs to the agmatine deiminase family
BSQ33_19095	COG2814	Major facilitator Superfamily
BSQ33_19105	COG1309	transcriptional regulator
BSQ33_19125	COG2801	Transposase and inactivated derivatives
BSQ33_19135	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BSQ33_19150	COG0604	alcohol dehydrogenase
BSQ33_19150	COG3321	synthase
BSQ33_19155	COG0604	alcohol dehydrogenase
BSQ33_19155	COG3321	synthase
BSQ33_19165	COG0604	alcohol dehydrogenase
BSQ33_19165	COG3321	synthase
BSQ33_19175	COG0604	alcohol dehydrogenase
BSQ33_19175	COG3321	synthase
BSQ33_19185	COG2963	transposase activity
BSQ33_19190	COG2801	Transposase and inactivated derivatives
BSQ33_19270	COG3210	domain, Protein
BSQ33_19380	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
BSQ33_19580	COG3328	transposase activity
BSQ33_19685	COG3210	domain, Protein
BSQ33_19685	COG3210	domain, Protein
BSQ33_19690	COG2831	hemolysin activation secretion protein
BSQ33_19705	COG4773	Receptor
BSQ33_19710	COG2207	Transcriptional regulator
BSQ33_19725	COG0346	lactoylglutathione lyase activity
BSQ33_19745	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ33_19810	COG0471	metal ion transport
BSQ33_19820	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BSQ33_19830	COG0583	DNA-binding transcription factor activity
BSQ33_19835	COG1620	l-lactate permease
BSQ33_19845	COG1139	Iron-sulfur cluster binding protein
BSQ33_19995	COG0840	transmembrane signaling receptor activity
BSQ33_20000	COG1609	Transcriptional regulator
BSQ33_20010	COG0247	lactate metabolic process
BSQ33_20015	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
BSQ33_20020	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BSQ33_20025	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BSQ33_20045	COG1120	ATPase activity
BSQ33_20050	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_20055	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ33_20060	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BSQ33_20095	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BSQ33_20095	COG0456	acetyltransferase
BSQ33_20160	COG3509	depolymerase
BSQ33_20160	COG3693	PFAM glycoside hydrolase, family 10
BSQ33_20185	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ33_20190	COG1794	racemase activity, acting on amino acids and derivatives
BSQ33_20205	COG3384	dioxygenase
BSQ33_20210	COG0583	DNA-binding transcription factor activity
BSQ33_20225	COG2272	Belongs to the type-B carboxylesterase lipase family
BSQ33_20265	COG2259	Doxx family
BSQ33_20275	COG3085	chromosome segregation
BSQ33_20280	COG2213	PTS system mannitol-specific
BSQ33_20280	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ33_20290	COG3722	fumarate hydratase activity
BSQ33_20300	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BSQ33_20325	COG1262	PFAM Formylglycine-generating sulfatase enzyme
BSQ33_20330	COG0259	pyridoxamine-phosphate oxidase activity
BSQ33_20360	COG1444	tRNA N-acetyltransferase activity
BSQ33_20390	COG0217	transcriptional regulatory protein
BSQ33_20395	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ33_20400	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ33_20405	COG1845	cytochrome c oxidase, subunit III
BSQ33_20410	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BSQ33_20415	COG0109	protoheme IX farnesyltransferase activity
BSQ33_20420	COG0058	SHG alpha-glucan phosphorylase activity
BSQ33_20425	COG1640	4-alpha-glucanotransferase
BSQ33_20430	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BSQ33_20435	COG0277	FAD linked oxidase domain protein
BSQ33_20465	COG0163	prenyltransferase activity
BSQ33_20470	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BSQ33_20480	COG5520	Belongs to the glycosyl hydrolase 30 family
BSQ33_20490	COG2171	N-acyltransferase activity
BSQ33_20495	COG0454	-acetyltransferase
BSQ33_20510	COG1067	ATP-dependent peptidase activity
BSQ33_20515	COG0534	Mate efflux family protein
BSQ33_20520	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BSQ33_20525	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BSQ33_20535	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BSQ33_20540	COG1940	carbohydrate kinase activity
BSQ33_20545	COG5001	Diguanylate cyclase
BSQ33_20545	COG3300	MHYT domain
BSQ33_20560	COG2818	Glycosylase
BSQ33_20565	COG1984	allophanate hydrolase subunit 2
BSQ33_20575	COG0511	ligase activity, forming carbon-carbon bonds
BSQ33_20585	COG0583	DNA-binding transcription factor activity
BSQ33_20595	COG2239	Acts as a magnesium transporter
BSQ33_20600	COG2113	Glycine betaine
BSQ33_20605	COG4176	ABC-type proline glycine betaine transport system permease component
BSQ33_20610	COG4175	Glycine betaine
BSQ33_20625	COG3338	carbonate dehydratase activity
BSQ33_20630	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BSQ33_20635	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BSQ33_20640	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BSQ33_20645	COG3437	response regulator, receiver
BSQ33_20645	COG0784	Response regulator, receiver
BSQ33_20650	COG4191	Histidine kinase
BSQ33_20650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_20655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ33_20655	COG4191	Histidine kinase
BSQ33_20670	COG3501	Rhs element vgr protein
BSQ33_20680	COG1388	LysM domain
BSQ33_20715	COG1321	iron dependent repressor
BSQ33_20720	COG1914	H( )-stimulated, divalent metal cation uptake system
BSQ33_20735	COG2211	Major facilitator Superfamily
BSQ33_20750	COG4533	DNA binding
BSQ33_20755	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BSQ33_20770	COG0583	DNA-binding transcription factor activity
BSQ33_20785	COG1785	Belongs to the alkaline phosphatase family
BSQ33_20795	COG2264	protein methyltransferase activity
BSQ33_20805	COG1022	Amp-dependent synthetase and ligase
BSQ33_20820	COG0745	RESPONSE REGULATOR receiver
BSQ33_20825	COG0642	Histidine kinase
BSQ33_20840	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ33_20845	COG0456	acetyltransferase
BSQ33_20850	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BSQ33_20855	COG0662	Cupin 2, conserved barrel domain protein
BSQ33_20860	COG0527	aspartate kinase activity
BSQ33_20865	COG0252	asparaginase activity
BSQ33_20875	COG0840	transmembrane signaling receptor activity
BSQ33_20880	COG1741	Belongs to the pirin family
BSQ33_20890	COG0668	transmembrane transport
BSQ33_20900	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BSQ33_20915	COG0745	RESPONSE REGULATOR receiver
BSQ33_20915	COG3706	GGDEF domain
BSQ33_20930	COG0835	chemotaxis
BSQ33_20930	COG0784	Response regulator, receiver
BSQ33_20940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ33_20945	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ33_20955	COG0583	DNA-binding transcription factor activity
BSQ33_20960	COG1486	melibiose metabolic process
BSQ33_20965	COG3530	Putative quorum-sensing-regulated virulence factor
BSQ33_20970	COG4104	PAAR repeat-containing protein
BSQ33_20985	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BSQ33_20990	COG1846	Transcriptional regulator
BSQ33_20995	COG1764	response to oxidative stress
BSQ33_21000	COG3118	belongs to the thioredoxin family
BSQ33_21030	COG4215	(ABC) transporter
BSQ33_21035	COG4160	amino acid transport
BSQ33_21040	COG4598	ABC transporter
BSQ33_21050	COG1280	lysine exporter protein (LysE YggA)
BSQ33_21065	COG0077	Prephenate dehydratase
BSQ33_21070	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ33_21090	COG1522	sequence-specific DNA binding
BSQ33_21095	COG2211	Major facilitator Superfamily
BSQ33_21100	COG3250	beta-galactosidase activity
BSQ33_21135	COG0714	Associated with various cellular activities
BSQ33_21150	COG1448	Aminotransferase
BSQ33_21160	COG2195	Cleaves the N-terminal amino acid of tripeptides
BSQ33_21170	COG3604	Transcriptional regulator
BSQ33_21175	COG1278	Cold shock
BSQ33_21180	COG3036	rescue of stalled ribosome
BSQ33_21190	COG3437	response regulator, receiver
BSQ33_21190	COG2205	protein histidine kinase activity
BSQ33_21190	COG4999	Histidine kinase
BSQ33_21190	COG3850	Histidine kinase
BSQ33_21200	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BSQ33_21200	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BSQ33_21210	COG0516	GMP reductase activity
BSQ33_21325	COG0531	amino acid
BSQ33_21335	COG4303	Ethanolamine ammonia lyase large subunit
BSQ33_21340	COG2207	Transcriptional regulator
BSQ33_21350	COG3033	Beta-eliminating lyase
BSQ33_21360	COG2814	Major facilitator Superfamily
BSQ33_21365	COG0583	DNA-binding transcription factor activity
BSQ33_21370	COG2723	6-phospho-beta-galactosidase activity
BSQ33_21375	COG1263	PTS System
BSQ33_21375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ33_21380	COG3265	gluconokinase activity
BSQ33_21385	COG1609	Transcriptional regulator
BSQ33_21390	COG0840	transmembrane signaling receptor activity
BSQ33_21395	COG4399	Belongs to the UPF0754 family
BSQ33_21400	COG1132	(ABC) transporter
BSQ33_21415	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BSQ33_21425	COG3706	GGDEF domain
BSQ33_21435	COG3272	Protein of unknown function (DUF1722)
BSQ33_21440	COG0789	Transcriptional regulator
BSQ33_21445	COG0415	Belongs to the DNA photolyase family
BSQ33_21450	COG1388	LysM domain
BSQ33_21450	COG1376	ErfK ybiS ycfS ynhG family protein