BSQ33_00020 SM00481 DNA polymerase alpha chain like domain BSQ33_00030 SM00363 S4 RNA-binding domain BSQ33_00035 SM00382 ATPases associated with a variety of cellular activities BSQ33_00040 SM00382 ATPases associated with a variety of cellular activities BSQ33_00075 SM00919 Malic enzyme, NAD binding domain BSQ33_00075 SM01274 BSQ33_00075 BSQ33_00100 SM00671 Sel1-like repeats. BSQ33_00140 SM00841 Elongation factor P, C-terminal BSQ33_00140 SM01185 BSQ33_00140 BSQ33_00150 SM00486 DNA polymerase type-B family BSQ33_00160 SM00421 helix_turn_helix, Lux Regulon BSQ33_00160 SM00448 cheY-homologous receiver domain BSQ33_00165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSQ33_00165 SM00465 GIY-YIG type nucleases (URI domain) BSQ33_00185 SM00382 ATPases associated with a variety of cellular activities BSQ33_00190 SM00382 ATPases associated with a variety of cellular activities BSQ33_00210 SM00382 ATPases associated with a variety of cellular activities BSQ33_00235 SM00155 Phospholipase D. Active site motifs. BSQ33_00240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_00240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_00280 SM00487 DEAD-like helicases superfamily BSQ33_00280 SM00490 helicase superfamily c-terminal domain BSQ33_00285 SM00363 S4 RNA-binding domain BSQ33_00325 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_00325 SM00895 BSQ33_00325 BSQ33_00330 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSQ33_00345 SM00849 Metallo-beta-lactamase superfamily BSQ33_00365 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_00390 SM00479 BSQ33_00390 BSQ33_00405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSQ33_00475 SM00382 ATPases associated with a variety of cellular activities BSQ33_00510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_00510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_00510 SM01049 BSQ33_00510 BSQ33_00520 SM00852 Probable molybdopterin binding domain BSQ33_00550 SM00434 DNA Topoisomerase IV BSQ33_00560 SM00849 Metallo-beta-lactamase superfamily BSQ33_00575 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_00585 SM00479 BSQ33_00585 BSQ33_00590 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_00590 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_00625 SM00448 cheY-homologous receiver domain BSQ33_00630 SM00091 PAS domain BSQ33_00630 SM00387 Histidine kinase-like ATPases BSQ33_00640 SM00764 Citrate lyase ligase C-terminal domain BSQ33_00670 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSQ33_00690 SM00382 ATPases associated with a variety of cellular activities BSQ33_00705 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_00750 SM00945 ProQ/FINO family BSQ33_00755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_00755 SM00245 tail specific protease BSQ33_00795 SM00981 BSQ33_00795 BSQ33_00800 SM00382 ATPases associated with a variety of cellular activities BSQ33_00835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_00835 SM00091 PAS domain BSQ33_00835 SM00267 diguanylate cyclase BSQ33_01000 SM00825 Beta-ketoacyl synthase BSQ33_01030 SM00387 Histidine kinase-like ATPases BSQ33_01030 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_01030 SM00448 cheY-homologous receiver domain BSQ33_01035 SM00897 FIST N domain BSQ33_01035 SM01204 BSQ33_01035 BSQ33_01045 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_01045 SM00419 helix_turn_helix, cAMP Regulatory protein BSQ33_01070 SM00382 ATPases associated with a variety of cellular activities BSQ33_01110 SM00382 ATPases associated with a variety of cellular activities BSQ33_01130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_01130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_01160 SM00028 Tetratricopeptide repeats BSQ33_01220 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_01235 SM01130 BSQ33_01235 BSQ33_01240 SM00354 helix_turn _helix lactose operon repressor BSQ33_01255 SM01130 BSQ33_01255 BSQ33_01270 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSQ33_01275 SM00226 Low molecular weight phosphatase family BSQ33_01310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_01310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_01345 SM00382 ATPases associated with a variety of cellular activities BSQ33_01350 SM00354 helix_turn _helix lactose operon repressor BSQ33_01375 SM00382 ATPases associated with a variety of cellular activities BSQ33_01375 SM00487 DEAD-like helicases superfamily BSQ33_01375 SM00490 helicase superfamily c-terminal domain BSQ33_01375 SM00847 Helicase associated domain (HA2) Add an annotation BSQ33_01400 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_01410 SM00479 BSQ33_01410 BSQ33_01475 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_01475 SM00895 BSQ33_01475 BSQ33_01485 SM00091 PAS domain BSQ33_01485 SM00382 ATPases associated with a variety of cellular activities BSQ33_01600 SM00382 ATPases associated with a variety of cellular activities BSQ33_01625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_01625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_01855 SM00893 Electron transfer flavoprotein domain BSQ33_01870 SM00989 BSQ33_01870 BSQ33_01885 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_01940 SM00052 Putative diguanylate phosphodiesterase BSQ33_01940 SM00267 diguanylate cyclase BSQ33_01950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_01950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_01955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_01955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_02005 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_02060 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_02085 SM00382 ATPases associated with a variety of cellular activities BSQ33_02100 SM00421 helix_turn_helix, Lux Regulon BSQ33_02130 SM00267 diguanylate cyclase BSQ33_02140 SM00260 Two component signalling adaptor domain BSQ33_02140 SM00448 cheY-homologous receiver domain BSQ33_02155 SM00028 Tetratricopeptide repeats BSQ33_02180 SM00112 Cadherin repeats. BSQ33_02200 SM00382 ATPases associated with a variety of cellular activities BSQ33_02360 SM00479 BSQ33_02360 BSQ33_02390 SM00411 bacterial (prokaryotic) histone like domain BSQ33_02395 SM00873 B3/4 domain BSQ33_02395 SM00874 tRNA synthetase B5 domain BSQ33_02395 SM00896 Ferredoxin-fold anticodon binding domain BSQ33_02425 SM00849 Metallo-beta-lactamase superfamily BSQ33_02535 SM00354 helix_turn _helix lactose operon repressor BSQ33_02555 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSQ33_02555 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSQ33_02555 SM00493 BSQ33_02555 BSQ33_02585 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_02590 SM00382 ATPases associated with a variety of cellular activities BSQ33_02590 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_02600 SM00357 Cold shock protein domain BSQ33_02660 SM00528 Domain in histone-like proteins of HNS family BSQ33_02750 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_02750 SM00876 Biotin and Thiamin Synthesis associated domain BSQ33_02790 SM00382 ATPases associated with a variety of cellular activities BSQ33_02800 SM00245 tail specific protease BSQ33_02810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_02810 SM00387 Histidine kinase-like ATPases BSQ33_02810 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_02815 SM00448 cheY-homologous receiver domain BSQ33_02815 SM00862 Transcriptional regulatory protein, C terminal BSQ33_02825 SM00382 ATPases associated with a variety of cellular activities BSQ33_02845 SM00267 diguanylate cyclase BSQ33_02850 SM00382 ATPases associated with a variety of cellular activities BSQ33_02890 SM00640 Glycosyl hydrolases family 32 BSQ33_02895 SM00354 helix_turn _helix lactose operon repressor BSQ33_02905 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_02910 SM00448 cheY-homologous receiver domain BSQ33_02910 SM00862 Transcriptional regulatory protein, C terminal BSQ33_02915 SM00382 ATPases associated with a variety of cellular activities BSQ33_02930 SM00448 cheY-homologous receiver domain BSQ33_02935 SM00387 Histidine kinase-like ATPases BSQ33_02935 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_02940 SM00387 Histidine kinase-like ATPases BSQ33_02940 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_02950 SM00448 cheY-homologous receiver domain BSQ33_02995 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSQ33_03005 SM01005 Alanine racemase, C-terminal domain BSQ33_03015 SM00797 Allophanate hydrolase subunit 2 BSQ33_03020 SM00796 Allophanate hydrolase subunit 1 BSQ33_03025 SM00052 Putative diguanylate phosphodiesterase BSQ33_03035 SM00637 BSQ33_03035 BSQ33_03040 SM00458 Ricin-type beta-trefoil BSQ33_03060 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_03095 SM00421 helix_turn_helix, Lux Regulon BSQ33_03125 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_03125 SM00871 Bacterial transcription activator, effector binding domain BSQ33_03140 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BSQ33_03140 SM00637 BSQ33_03140 BSQ33_03175 SM00046 Diacylglycerol kinase catalytic domain (presumed) BSQ33_03175 SM00195 Dual specificity phosphatase, catalytic domain BSQ33_03175 SM00404 Protein tyrosine phosphatase, catalytic domain motif BSQ33_03195 SM00749 bacterial OsmY and nodulation domain BSQ33_03200 SM00382 ATPases associated with a variety of cellular activities BSQ33_03250 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_03265 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_03290 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_03330 SM00344 helix_turn_helix ASNC type BSQ33_03350 SM00978 BSQ33_03350 BSQ33_03360 SM00563 Phosphate acyltransferases BSQ33_03375 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BSQ33_03405 SM00382 ATPases associated with a variety of cellular activities BSQ33_03430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_03430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_03440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_03465 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_03465 SM00866 BSQ33_03465 BSQ33_03510 SM01321 BSQ33_03510 BSQ33_03515 SM01144 BSQ33_03515 BSQ33_03575 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_03590 SM00382 ATPases associated with a variety of cellular activities BSQ33_03625 SM00870 BSQ33_03625 BSQ33_03630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_03650 SM01130 BSQ33_03650 BSQ33_03655 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_03660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_03660 SM00091 PAS domain BSQ33_03660 SM00267 diguanylate cyclase BSQ33_03700 SM00052 Putative diguanylate phosphodiesterase BSQ33_03700 SM00267 diguanylate cyclase BSQ33_03720 SM00382 ATPases associated with a variety of cellular activities BSQ33_03725 SM00382 ATPases associated with a variety of cellular activities BSQ33_03730 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_03740 SM00829 Enoylreductase BSQ33_03755 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BSQ33_03755 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BSQ33_03755 SM00493 BSQ33_03755 BSQ33_03790 SM00260 Two component signalling adaptor domain BSQ33_03795 SM00260 Two component signalling adaptor domain BSQ33_03805 SM00073 Histidine Phosphotransfer domain BSQ33_03805 SM00260 Two component signalling adaptor domain BSQ33_03805 SM00387 Histidine kinase-like ATPases BSQ33_03805 SM01231 BSQ33_03805 BSQ33_03815 SM00448 cheY-homologous receiver domain BSQ33_03830 SM00382 ATPases associated with a variety of cellular activities BSQ33_03830 SM00962 SRP54-type protein, GTPase domain BSQ33_03840 SM00855 Phosphoglycerate mutase family BSQ33_03855 SM00836 DALR anticodon binding domain BSQ33_03855 SM01016 Arginyl tRNA synthetase N terminal dom BSQ33_03880 SM00899 BSQ33_03880 BSQ33_03890 SM00382 ATPases associated with a variety of cellular activities BSQ33_03900 SM00881 CoA binding domain BSQ33_03915 SM00861 Transketolase, pyrimidine binding domain BSQ33_03990 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSQ33_04000 SM00825 Beta-ketoacyl synthase BSQ33_04035 SM00463 Small MutS-related domain BSQ33_04090 SM00382 ATPases associated with a variety of cellular activities BSQ33_04115 SM00382 ATPases associated with a variety of cellular activities BSQ33_04115 SM00448 cheY-homologous receiver domain BSQ33_04120 SM00091 PAS domain BSQ33_04120 SM00387 Histidine kinase-like ATPases BSQ33_04120 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_04125 SM00382 ATPases associated with a variety of cellular activities BSQ33_04170 SM00900 BSQ33_04170 BSQ33_04185 SM00382 ATPases associated with a variety of cellular activities BSQ33_04245 SM01130 BSQ33_04245 BSQ33_04255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_04255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_04320 SM00937 BSQ33_04320 BSQ33_04340 SM01400 BSQ33_04340 BSQ33_04455 SM00047 Lysozyme subfamily 2 BSQ33_04500 SM00138 Methyltransferase, chemotaxis proteins BSQ33_04505 SM00260 Two component signalling adaptor domain BSQ33_04505 SM00448 cheY-homologous receiver domain BSQ33_04510 SM00858 BSQ33_04510 BSQ33_04565 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_04600 SM00463 Small MutS-related domain BSQ33_04645 SM00479 BSQ33_04645 BSQ33_04660 SM00849 Metallo-beta-lactamase superfamily BSQ33_04665 SM00257 Lysin motif BSQ33_04675 SM00938 Nitrogen regulatory protein P-II BSQ33_04680 SM00977 TilS substrate C-terminal domain BSQ33_04690 SM00481 DNA polymerase alpha chain like domain BSQ33_04720 SM00935 Outer membrane protein (OmpH-like) BSQ33_04730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_04775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_04830 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BSQ33_04885 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_04910 SM00900 BSQ33_04910 BSQ33_04975 SM00925 MltA specific insert domain BSQ33_05035 SM00354 helix_turn _helix lactose operon repressor BSQ33_05060 SM00838 Elongation factor G C-terminus BSQ33_05060 SM00889 Elongation factor G, domain IV BSQ33_05065 SM00382 ATPases associated with a variety of cellular activities BSQ33_05090 SM01133 BSQ33_05090 BSQ33_05125 SM00986 Uracil DNA glycosylase superfamily BSQ33_05125 SM00987 UreE urease accessory protein, C-terminal domain BSQ33_05130 SM00518 AP endonuclease family 2 BSQ33_05165 SM00448 cheY-homologous receiver domain BSQ33_05165 SM00862 Transcriptional regulatory protein, C terminal BSQ33_05170 SM00073 Histidine Phosphotransfer domain BSQ33_05170 SM00091 PAS domain BSQ33_05170 SM00387 Histidine kinase-like ATPases BSQ33_05170 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_05170 SM00448 cheY-homologous receiver domain BSQ33_05175 SM00267 diguanylate cyclase BSQ33_05180 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_05235 SM00851 MGS-like domain BSQ33_05235 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSQ33_05240 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BSQ33_05255 SM00957 SecA DEAD-like domain BSQ33_05255 SM00958 SecA preprotein cross-linking domain BSQ33_05270 SM00864 Tubulin/FtsZ family, GTPase domain BSQ33_05270 SM00865 Tubulin/FtsZ family, C-terminal domain BSQ33_05275 SM00842 Cell division protein FtsA BSQ33_05350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_05350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_05375 SM00749 bacterial OsmY and nodulation domain BSQ33_05420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_05425 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BSQ33_05450 SM00382 ATPases associated with a variety of cellular activities BSQ33_05450 SM00962 SRP54-type protein, GTPase domain BSQ33_05450 SM00963 SRP54-type protein, helical bundle domain BSQ33_05460 SM01091 Transporter associated domain BSQ33_05485 SM00829 Enoylreductase BSQ33_05545 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSQ33_05555 SM00382 ATPases associated with a variety of cellular activities BSQ33_05565 SM00346 helix_turn_helix isocitrate lyase regulation BSQ33_05610 SM00382 ATPases associated with a variety of cellular activities BSQ33_05655 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BSQ33_05655 SM00534 ATPase domain of DNA mismatch repair MUTS family BSQ33_05660 SM00448 cheY-homologous receiver domain BSQ33_05660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_05665 SM00387 Histidine kinase-like ATPases BSQ33_05685 SM00257 Lysin motif BSQ33_05730 SM00905 Dihydroneopterin aldolase BSQ33_05735 SM01207 BSQ33_05735 BSQ33_05765 SM00400 zinc finger BSQ33_05765 SM00493 BSQ33_05765 BSQ33_05765 SM00766 DNA primase DnaG DnaB-binding BSQ33_05835 SM00829 Enoylreductase BSQ33_05840 SM00563 Phosphate acyltransferases BSQ33_05895 SM00825 Beta-ketoacyl synthase BSQ33_06015 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_06025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_06025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_06100 SM00091 PAS domain BSQ33_06100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_06110 SM00357 Cold shock protein domain BSQ33_06120 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_06120 SM01134 BSQ33_06120 BSQ33_06150 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ33_06155 SM00861 Transketolase, pyrimidine binding domain BSQ33_06165 SM00731 SprT homologues. BSQ33_06185 SM00732 Likely ribonuclease with RNase H fold. BSQ33_06190 SM00382 ATPases associated with a variety of cellular activities BSQ33_06210 SM01152 BSQ33_06210 BSQ33_06220 SM00448 cheY-homologous receiver domain BSQ33_06220 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_06225 SM00073 Histidine Phosphotransfer domain BSQ33_06225 SM00091 PAS domain BSQ33_06225 SM00387 Histidine kinase-like ATPases BSQ33_06225 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_06225 SM00448 cheY-homologous receiver domain BSQ33_06230 SM00331 Sigma factor PP2C-like phosphatases BSQ33_06235 SM00387 Histidine kinase-like ATPases BSQ33_06270 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_06360 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_06375 SM00478 endonuclease III BSQ33_06450 SM00271 DnaJ molecular chaperone homology domain BSQ33_06470 SM00650 Ribosomal RNA adenine dimethylases BSQ33_06555 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_06555 SM00895 BSQ33_06555 BSQ33_06610 SM01209 BSQ33_06610 BSQ33_06655 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_06680 SM00052 Putative diguanylate phosphodiesterase BSQ33_06680 SM00267 diguanylate cyclase BSQ33_06725 SM00382 ATPases associated with a variety of cellular activities BSQ33_06730 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BSQ33_06820 SM00421 helix_turn_helix, Lux Regulon BSQ33_06830 SM01018 B12 binding domain BSQ33_06940 SM00487 DEAD-like helicases superfamily BSQ33_06970 SM00382 ATPases associated with a variety of cellular activities BSQ33_06975 SM00823 Phosphopantetheine attachment site BSQ33_06980 SM00823 Phosphopantetheine attachment site BSQ33_06985 SM00823 Phosphopantetheine attachment site BSQ33_07010 SM00382 ATPases associated with a variety of cellular activities BSQ33_07055 SM00838 Elongation factor G C-terminus BSQ33_07055 SM00889 Elongation factor G, domain IV BSQ33_07095 SM00320 WD40 repeats BSQ33_07110 SM00244 prohibitin homologues BSQ33_07115 SM00244 prohibitin homologues BSQ33_07135 SM00853 MutL C terminal dimerisation domain BSQ33_07135 SM01340 BSQ33_07135 BSQ33_07140 SM00257 Lysin motif BSQ33_07140 SM00646 BSQ33_07140 BSQ33_07180 SM00479 BSQ33_07180 BSQ33_07195 SM00020 Trypsin-like serine protease BSQ33_07245 SM00663 RNA polymerase I subunit A N-terminus BSQ33_07275 SM00649 Ribosomal protein L11/L12 BSQ33_07280 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BSQ33_07280 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSQ33_07335 SM00155 Phospholipase D. Active site motifs. BSQ33_07360 SM00357 Cold shock protein domain BSQ33_07360 SM00382 ATPases associated with a variety of cellular activities BSQ33_07360 SM00959 Rho termination factor, N-terminal domain BSQ33_07370 SM00487 DEAD-like helicases superfamily BSQ33_07370 SM00490 helicase superfamily c-terminal domain BSQ33_07380 SM00387 Histidine kinase-like ATPases BSQ33_07380 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_07380 SM00448 cheY-homologous receiver domain BSQ33_07390 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_07390 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_07395 SM00479 BSQ33_07395 BSQ33_07420 SM00878 Biotin carboxylase C-terminal domain BSQ33_07475 SM00822 BSQ33_07475 BSQ33_07530 SM00798 AICARFT/IMPCHase bienzyme BSQ33_07530 SM00851 MGS-like domain BSQ33_07535 SM01209 BSQ33_07535 BSQ33_07535 SM01210 BSQ33_07535 BSQ33_07540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_07540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_07540 SM01049 BSQ33_07540 BSQ33_07550 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_07550 SM00732 Likely ribonuclease with RNase H fold. BSQ33_07630 SM00382 ATPases associated with a variety of cellular activities BSQ33_07645 SM00363 S4 RNA-binding domain BSQ33_07685 SM01230 BSQ33_07685 BSQ33_07690 SM00091 PAS domain BSQ33_07690 SM00387 Histidine kinase-like ATPases BSQ33_07690 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_07695 SM00382 ATPases associated with a variety of cellular activities BSQ33_07695 SM00448 cheY-homologous receiver domain BSQ33_07755 SM00360 RNA recognition motif BSQ33_07790 SM00833 Cobalamin synthesis protein cobW C-terminal domain BSQ33_07800 SM00382 ATPases associated with a variety of cellular activities BSQ33_07810 SM00382 ATPases associated with a variety of cellular activities BSQ33_07815 SM00382 ATPases associated with a variety of cellular activities BSQ33_08075 SM00563 Phosphate acyltransferases BSQ33_08100 SM00450 Rhodanese Homology Domain BSQ33_08115 SM00382 ATPases associated with a variety of cellular activities BSQ33_08120 SM00382 ATPases associated with a variety of cellular activities BSQ33_08120 SM00962 SRP54-type protein, GTPase domain BSQ33_08120 SM00963 SRP54-type protein, helical bundle domain BSQ33_08155 SM00052 Putative diguanylate phosphodiesterase BSQ33_08180 SM00923 MbtH-like protein BSQ33_08205 SM01144 BSQ33_08205 BSQ33_08240 SM01219 BSQ33_08240 BSQ33_08270 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_08300 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSQ33_08300 SM00474 3'-5' exonuclease BSQ33_08300 SM00475 5'-3' exonuclease BSQ33_08300 SM00482 DNA polymerase A domain BSQ33_08305 SM01004 Delta-aminolevulinic acid dehydratase BSQ33_08360 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_08375 SM01007 Class II Aldolase and Adducin N-terminal domain BSQ33_08390 SM00382 ATPases associated with a variety of cellular activities BSQ33_08440 SM00823 Phosphopantetheine attachment site BSQ33_08460 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_08545 SM00866 BSQ33_08545 BSQ33_08590 SM00344 helix_turn_helix ASNC type BSQ33_08630 SM00382 ATPases associated with a variety of cellular activities BSQ33_08635 SM00876 Biotin and Thiamin Synthesis associated domain BSQ33_08750 SM00382 ATPases associated with a variety of cellular activities BSQ33_08790 SM00470 ParB-like nuclease domain BSQ33_08805 SM01228 BSQ33_08805 BSQ33_08850 SM01234 BSQ33_08850 BSQ33_08865 SM00382 ATPases associated with a variety of cellular activities BSQ33_08875 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_08880 SM00382 ATPases associated with a variety of cellular activities BSQ33_08880 SM00760 Bacterial dnaA protein helix-turn-helix domain BSQ33_08885 SM00480 DNA polymerase III beta subunit BSQ33_08895 SM00387 Histidine kinase-like ATPases BSQ33_08895 SM00433 TopoisomeraseII BSQ33_08980 SM00796 Allophanate hydrolase subunit 1 BSQ33_08980 SM00797 Allophanate hydrolase subunit 2 BSQ33_08980 SM00878 Biotin carboxylase C-terminal domain BSQ33_08995 SM00382 ATPases associated with a variety of cellular activities BSQ33_09010 SM00836 DALR anticodon binding domain BSQ33_09040 SM00028 Tetratricopeptide repeats BSQ33_09080 SM00382 ATPases associated with a variety of cellular activities BSQ33_09085 SM00563 Phosphate acyltransferases BSQ33_09100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_09165 SM01001 AIR carboxylase BSQ33_09225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_09225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_09290 SM00382 ATPases associated with a variety of cellular activities BSQ33_09330 SM00382 ATPases associated with a variety of cellular activities BSQ33_09340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_09340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_09360 SM00014 Acid phosphatase homologues BSQ33_09370 SM01022 BSQ33_09370 BSQ33_09395 SM00341 Helicase and RNase D C-terminal BSQ33_09395 SM00487 DEAD-like helicases superfamily BSQ33_09395 SM00490 helicase superfamily c-terminal domain BSQ33_09395 SM00956 BSQ33_09395 BSQ33_09440 SM00354 helix_turn _helix lactose operon repressor BSQ33_09475 SM00382 ATPases associated with a variety of cellular activities BSQ33_09500 SM00984 UDP binding domain BSQ33_09670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_09670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_09670 SM01049 BSQ33_09670 BSQ33_09695 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BSQ33_09695 SM01232 BSQ33_09695 BSQ33_09930 SM00986 Uracil DNA glycosylase superfamily BSQ33_09930 SM00987 UreE urease accessory protein, C-terminal domain BSQ33_09935 SM00411 bacterial (prokaryotic) histone like domain BSQ33_09945 SM00458 Ricin-type beta-trefoil BSQ33_09945 SM00656 BSQ33_09945 BSQ33_09945 SM00710 Parallel beta-helix repeats BSQ33_09950 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_09955 SM00448 cheY-homologous receiver domain BSQ33_09955 SM00862 Transcriptional regulatory protein, C terminal BSQ33_09960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_09960 SM00387 Histidine kinase-like ATPases BSQ33_09960 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_09980 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_09985 SM00487 DEAD-like helicases superfamily BSQ33_09985 SM00490 helicase superfamily c-terminal domain BSQ33_09990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_09990 SM00954 Region found in RelA / SpoT proteins BSQ33_09995 SM01409 BSQ33_09995 BSQ33_10000 SM00072 Guanylate kinase homologues. BSQ33_10025 SM00421 helix_turn_helix, Lux Regulon BSQ33_10025 SM00448 cheY-homologous receiver domain BSQ33_10045 SM00091 PAS domain BSQ33_10045 SM00267 diguanylate cyclase BSQ33_10060 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_10060 SM00387 Histidine kinase-like ATPases BSQ33_10060 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_10065 SM00448 cheY-homologous receiver domain BSQ33_10065 SM00862 Transcriptional regulatory protein, C terminal BSQ33_10125 SM00919 Malic enzyme, NAD binding domain BSQ33_10125 SM01274 BSQ33_10125 BSQ33_10135 SM00487 DEAD-like helicases superfamily BSQ33_10135 SM00490 helicase superfamily c-terminal domain BSQ33_10140 SM00354 helix_turn _helix lactose operon repressor BSQ33_10155 SM00382 ATPases associated with a variety of cellular activities BSQ33_10155 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_10195 SM00883 Chaperonin 10 Kd subunit BSQ33_10205 SM00382 ATPases associated with a variety of cellular activities BSQ33_10215 SM00841 Elongation factor P, C-terminal BSQ33_10215 SM01185 BSQ33_10215 BSQ33_10245 SM00450 Rhodanese Homology Domain BSQ33_10260 SM00971 Serine acetyltransferase, N-terminal BSQ33_10280 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSQ33_10395 SM00637 BSQ33_10395 BSQ33_10425 SM00825 Beta-ketoacyl synthase BSQ33_10435 SM00825 Beta-ketoacyl synthase BSQ33_10450 SM00822 BSQ33_10450 BSQ33_10495 SM01150 BSQ33_10495 BSQ33_10500 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_10500 SM00419 helix_turn_helix, cAMP Regulatory protein BSQ33_10525 SM00382 ATPases associated with a variety of cellular activities BSQ33_10555 SM00788 Adenylosuccinate synthetase BSQ33_10560 SM00671 Sel1-like repeats. BSQ33_10565 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_10565 SM00357 Cold shock protein domain BSQ33_10565 SM00955 BSQ33_10565 BSQ33_10570 SM00967 RNA 2'-O ribose methyltransferase substrate binding BSQ33_10575 SM01403 BSQ33_10575 BSQ33_10595 SM01382 BSQ33_10595 BSQ33_10595 SM01383 BSQ33_10595 BSQ33_10610 SM00322 K homology RNA-binding domain BSQ33_10630 SM01374 BSQ33_10630 BSQ33_10635 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BSQ33_10700 SM00363 S4 RNA-binding domain BSQ33_10700 SM01390 BSQ33_10700 BSQ33_10705 SM00662 RNA polymerases D BSQ33_10780 SM00382 ATPases associated with a variety of cellular activities BSQ33_10850 SM00382 ATPases associated with a variety of cellular activities BSQ33_10885 SM00924 MgtE intracellular N domain BSQ33_10915 SM00382 ATPases associated with a variety of cellular activities BSQ33_10935 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_10945 SM00382 ATPases associated with a variety of cellular activities BSQ33_10980 SM00563 Phosphate acyltransferases BSQ33_11005 SM01061 CAT RNA binding domain BSQ33_11030 SM00487 DEAD-like helicases superfamily BSQ33_11030 SM00490 helicase superfamily c-terminal domain BSQ33_11115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_11170 SM01329 BSQ33_11170 BSQ33_11175 SM00917 LeuA allosteric (dimerisation) domain BSQ33_11180 SM00014 Acid phosphatase homologues BSQ33_11205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_11325 SM00838 Elongation factor G C-terminus BSQ33_11335 SM00358 Double-stranded RNA binding motif BSQ33_11335 SM00535 Ribonuclease III family BSQ33_11360 SM00073 Histidine Phosphotransfer domain BSQ33_11360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_11360 SM00387 Histidine kinase-like ATPases BSQ33_11360 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_11360 SM00448 cheY-homologous receiver domain BSQ33_11370 SM00954 Region found in RelA / SpoT proteins BSQ33_11385 SM01192 BSQ33_11385 BSQ33_11385 SM01193 BSQ33_11385 BSQ33_11395 SM00287 Bacterial SH3 domain homologues BSQ33_11410 SM00880 BSQ33_11410 BSQ33_11410 SM01118 BSQ33_11410 BSQ33_11415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_11415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_11455 SM00387 Histidine kinase-like ATPases BSQ33_11455 SM00433 TopoisomeraseII BSQ33_11460 SM00434 DNA Topoisomerase IV BSQ33_11520 SM00382 ATPases associated with a variety of cellular activities BSQ33_11540 SM00644 BSQ33_11540 BSQ33_11565 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_11565 SM00895 BSQ33_11565 BSQ33_11595 SM00947 Carbonic anhydrase BSQ33_11600 SM00382 ATPases associated with a variety of cellular activities BSQ33_11630 SM01007 Class II Aldolase and Adducin N-terminal domain BSQ33_11640 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ33_11645 SM00346 helix_turn_helix isocitrate lyase regulation BSQ33_11655 SM00382 ATPases associated with a variety of cellular activities BSQ33_11680 SM00346 helix_turn_helix isocitrate lyase regulation BSQ33_11720 SM00487 DEAD-like helicases superfamily BSQ33_11720 SM00490 helicase superfamily c-terminal domain BSQ33_11720 SM00847 Helicase associated domain (HA2) Add an annotation BSQ33_11740 SM00938 Nitrogen regulatory protein P-II BSQ33_11795 SM01103 BSQ33_11795 BSQ33_11805 SM00382 ATPases associated with a variety of cellular activities BSQ33_11840 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_11860 SM01387 BSQ33_11860 BSQ33_11865 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_11865 SM00322 K homology RNA-binding domain BSQ33_11870 SM00028 Tetratricopeptide repeats BSQ33_11890 SM00052 Putative diguanylate phosphodiesterase BSQ33_11890 SM00091 PAS domain BSQ33_11890 SM00267 diguanylate cyclase BSQ33_12015 SM00226 Low molecular weight phosphatase family BSQ33_12025 SM00448 cheY-homologous receiver domain BSQ33_12025 SM00862 Transcriptional regulatory protein, C terminal BSQ33_12045 SM00487 DEAD-like helicases superfamily BSQ33_12045 SM00490 helicase superfamily c-terminal domain BSQ33_12075 SM00382 ATPases associated with a variety of cellular activities BSQ33_12090 SM00927 DNA mismatch repair enzyme MutH BSQ33_12100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_12130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSQ33_12145 SM00904 Riboflavin kinase BSQ33_12195 SM00448 cheY-homologous receiver domain BSQ33_12195 SM00850 LytTr DNA-binding domain BSQ33_12200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_12210 SM00830 Chorismate mutase type II BSQ33_12220 SM00382 ATPases associated with a variety of cellular activities BSQ33_12250 SM00052 Putative diguanylate phosphodiesterase BSQ33_12250 SM00267 diguanylate cyclase BSQ33_12260 SM00830 Chorismate mutase type II BSQ33_12275 SM00363 S4 RNA-binding domain BSQ33_12285 SM00382 ATPases associated with a variety of cellular activities BSQ33_12285 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_12460 SM00448 cheY-homologous receiver domain BSQ33_12460 SM00862 Transcriptional regulatory protein, C terminal BSQ33_12465 SM00091 PAS domain BSQ33_12465 SM00387 Histidine kinase-like ATPases BSQ33_12465 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_12495 SM00382 ATPases associated with a variety of cellular activities BSQ33_12525 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_12540 SM01323 BSQ33_12540 BSQ33_12585 SM00271 DnaJ molecular chaperone homology domain BSQ33_12610 SM00562 BSQ33_12610 BSQ33_12640 SM00564 beta-propeller repeat BSQ33_12645 SM00382 ATPases associated with a variety of cellular activities BSQ33_12660 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_12660 SM01240 BSQ33_12660 BSQ33_12740 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_12770 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_12780 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_12785 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_12785 SM01134 BSQ33_12785 BSQ33_12790 SM01133 BSQ33_12790 BSQ33_12810 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_12850 SM00422 helix_turn_helix, mercury resistance BSQ33_12875 SM00448 cheY-homologous receiver domain BSQ33_12875 SM00862 Transcriptional regulatory protein, C terminal BSQ33_12880 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_12880 SM00387 Histidine kinase-like ATPases BSQ33_12880 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_12890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_12905 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ33_12915 SM01007 Class II Aldolase and Adducin N-terminal domain BSQ33_12930 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_12930 SM01134 BSQ33_12930 BSQ33_12950 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_12995 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_13090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_13095 SM01061 CAT RNA binding domain BSQ33_13125 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_13170 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_13175 SM00900 BSQ33_13175 BSQ33_13200 SM00387 Histidine kinase-like ATPases BSQ33_13200 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_13205 SM00448 cheY-homologous receiver domain BSQ33_13205 SM00862 Transcriptional regulatory protein, C terminal BSQ33_13295 SM00271 DnaJ molecular chaperone homology domain BSQ33_13325 SM00829 Enoylreductase BSQ33_13340 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_13345 SM01211 BSQ33_13345 BSQ33_13350 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BSQ33_13350 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BSQ33_13365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_13365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_13430 SM00861 Transketolase, pyrimidine binding domain BSQ33_13460 SM00981 BSQ33_13460 BSQ33_13485 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BSQ33_13485 SM00475 5'-3' exonuclease BSQ33_13500 SM00028 Tetratricopeptide repeats BSQ33_13530 SM00382 ATPases associated with a variety of cellular activities BSQ33_13530 SM00930 BSQ33_13530 BSQ33_13540 SM00354 helix_turn _helix lactose operon repressor BSQ33_13550 SM00642 Alpha-amylase domain BSQ33_13580 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_13595 SM00387 Histidine kinase-like ATPases BSQ33_13595 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_13595 SM00448 cheY-homologous receiver domain BSQ33_13600 SM00936 Penicillin-binding protein 5, C-terminal domain BSQ33_13655 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_13655 SM01091 Transporter associated domain BSQ33_13670 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_13705 SM00771 ZipA, C-terminal domain (FtsZ-binding) BSQ33_13710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSQ33_13710 SM00292 breast cancer carboxy-terminal domain BSQ33_13710 SM00532 Ligase N family BSQ33_13715 SM00422 helix_turn_helix, mercury resistance BSQ33_13745 SM00938 Nitrogen regulatory protein P-II BSQ33_13750 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_13765 SM00862 Transcriptional regulatory protein, C terminal BSQ33_13770 SM00387 Histidine kinase-like ATPases BSQ33_13785 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BSQ33_13845 SM00479 BSQ33_13845 BSQ33_13860 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_13860 SM00895 BSQ33_13860 BSQ33_13865 SM00478 endonuclease III BSQ33_13865 SM00525 BSQ33_13865 BSQ33_13875 SM00900 BSQ33_13875 BSQ33_13930 SM00487 DEAD-like helicases superfamily BSQ33_13930 SM00490 helicase superfamily c-terminal domain BSQ33_13935 SM00382 ATPases associated with a variety of cellular activities BSQ33_13935 SM00448 cheY-homologous receiver domain BSQ33_13950 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_13955 SM00852 Probable molybdopterin binding domain BSQ33_13975 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_14015 SM00226 Low molecular weight phosphatase family BSQ33_14045 SM00448 cheY-homologous receiver domain BSQ33_14055 SM00382 ATPases associated with a variety of cellular activities BSQ33_14065 SM00493 BSQ33_14065 BSQ33_14150 SM00859 Semialdehyde dehydrogenase, NAD binding domain BSQ33_14170 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_14175 SM00363 S4 RNA-binding domain BSQ33_14205 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_14210 SM00822 BSQ33_14210 BSQ33_14220 SM00825 Beta-ketoacyl synthase BSQ33_14280 SM00260 Two component signalling adaptor domain BSQ33_14280 SM00448 cheY-homologous receiver domain BSQ33_14285 SM00822 BSQ33_14285 BSQ33_14295 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_14310 SM00422 helix_turn_helix, mercury resistance BSQ33_14330 SM00656 BSQ33_14330 BSQ33_14350 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_14350 SM01134 BSQ33_14350 BSQ33_14360 SM00052 Putative diguanylate phosphodiesterase BSQ33_14360 SM00267 diguanylate cyclase BSQ33_14365 SM00448 cheY-homologous receiver domain BSQ33_14370 SM00387 Histidine kinase-like ATPases BSQ33_14405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_14405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_14415 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_14460 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_14490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_14490 SM00387 Histidine kinase-like ATPases BSQ33_14490 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_14490 SM00448 cheY-homologous receiver domain BSQ33_14495 SM00052 Putative diguanylate phosphodiesterase BSQ33_14495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_14495 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_14495 SM00267 diguanylate cyclase BSQ33_14495 SM00448 cheY-homologous receiver domain BSQ33_14500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_14520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ33_14540 SM00870 BSQ33_14540 BSQ33_14560 SM00487 DEAD-like helicases superfamily BSQ33_14560 SM00491 BSQ33_14560 BSQ33_14590 SM00474 3'-5' exonuclease BSQ33_14655 SM01359 BSQ33_14655 BSQ33_14655 SM01360 BSQ33_14655 BSQ33_14700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_14700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_14700 SM01358 BSQ33_14700 BSQ33_14710 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_14710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSQ33_14715 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_14775 SM00382 ATPases associated with a variety of cellular activities BSQ33_14775 SM00448 cheY-homologous receiver domain BSQ33_14780 SM00387 Histidine kinase-like ATPases BSQ33_14780 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_14795 SM00382 ATPases associated with a variety of cellular activities BSQ33_14795 SM00994 ClpX C4-type zinc finger BSQ33_14795 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_14800 SM00382 ATPases associated with a variety of cellular activities BSQ33_14800 SM00464 Found in ATP-dependent protease La (LON) BSQ33_14805 SM00411 bacterial (prokaryotic) histone like domain BSQ33_14820 SM00387 Histidine kinase-like ATPases BSQ33_14820 SM00448 cheY-homologous receiver domain BSQ33_14835 SM00387 Histidine kinase-like ATPases BSQ33_14845 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_14850 SM00411 bacterial (prokaryotic) histone like domain BSQ33_14860 SM00028 Tetratricopeptide repeats BSQ33_14865 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ33_14890 SM00344 helix_turn_helix ASNC type BSQ33_14895 SM00843 BSQ33_14895 BSQ33_14910 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_14965 SM00382 ATPases associated with a variety of cellular activities BSQ33_14990 SM00421 helix_turn_helix, Lux Regulon BSQ33_15000 SM00487 DEAD-like helicases superfamily BSQ33_15000 SM00490 helicase superfamily c-terminal domain BSQ33_15000 SM00982 BSQ33_15000 BSQ33_15000 SM01058 CarD-like/TRCF domain BSQ33_15015 SM00382 ATPases associated with a variety of cellular activities BSQ33_15030 SM00849 Metallo-beta-lactamase superfamily BSQ33_15035 SM00382 ATPases associated with a variety of cellular activities BSQ33_15065 SM00763 PrkA AAA domain BSQ33_15080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_15110 SM00491 BSQ33_15110 BSQ33_15140 SM00840 BSQ33_15140 BSQ33_15150 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BSQ33_15155 SM00382 ATPases associated with a variety of cellular activities BSQ33_15210 SM00028 Tetratricopeptide repeats BSQ33_15240 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_15245 SM00367 Leucine-rich repeat - CC (cysteine-containing) subfamily BSQ33_15255 SM00829 Enoylreductase BSQ33_15260 SM00900 BSQ33_15260 BSQ33_15275 SM00091 PAS domain BSQ33_15275 SM00387 Histidine kinase-like ATPases BSQ33_15285 SM00448 cheY-homologous receiver domain BSQ33_15300 SM00813 Alpha-L-arabinofuranosidase C-terminus BSQ33_15320 SM00487 DEAD-like helicases superfamily BSQ33_15320 SM00490 helicase superfamily c-terminal domain BSQ33_15335 SM00923 MbtH-like protein BSQ33_15340 SM00823 Phosphopantetheine attachment site BSQ33_15340 SM00824 Thioesterase BSQ33_15345 SM00382 ATPases associated with a variety of cellular activities BSQ33_15390 SM00354 helix_turn _helix lactose operon repressor BSQ33_15415 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_15440 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_15520 SM00028 Tetratricopeptide repeats BSQ33_15545 SM00382 ATPases associated with a variety of cellular activities BSQ33_15565 SM00354 helix_turn _helix lactose operon repressor BSQ33_15580 SM00245 tail specific protease BSQ33_15595 SM00382 ATPases associated with a variety of cellular activities BSQ33_15600 SM00382 ATPases associated with a variety of cellular activities BSQ33_15665 SM00448 cheY-homologous receiver domain BSQ33_15670 SM00387 Histidine kinase-like ATPases BSQ33_15685 SM00729 Elongator protein 3, MiaB family, Radical SAM BSQ33_15700 SM00344 helix_turn_helix ASNC type BSQ33_15710 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_15710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSQ33_15720 SM00382 ATPases associated with a variety of cellular activities BSQ33_15775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_15775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_15795 SM00382 ATPases associated with a variety of cellular activities BSQ33_15810 SM00100 Cyclic nucleotide-monophosphate binding domain BSQ33_15830 SM00052 Putative diguanylate phosphodiesterase BSQ33_15830 SM00267 diguanylate cyclase BSQ33_15920 SM01061 CAT RNA binding domain BSQ33_16050 SM00387 Histidine kinase-like ATPases BSQ33_16050 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_16050 SM00448 cheY-homologous receiver domain BSQ33_16070 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_16105 SM00382 ATPases associated with a variety of cellular activities BSQ33_16255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_16270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_16280 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_16295 SM01234 BSQ33_16295 BSQ33_16370 SM01350 BSQ33_16370 BSQ33_16390 SM00481 DNA polymerase alpha chain like domain BSQ33_16415 SM00829 Enoylreductase BSQ33_16450 SM00267 diguanylate cyclase BSQ33_16455 SM00387 Histidine kinase-like ATPases BSQ33_16455 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_16460 SM00897 FIST N domain BSQ33_16460 SM01204 BSQ33_16460 BSQ33_16465 SM00244 prohibitin homologues BSQ33_16475 SM00479 BSQ33_16475 BSQ33_16480 SM00116 Domain in cystathionine beta-synthase and other proteins. BSQ33_16505 SM00387 Histidine kinase-like ATPases BSQ33_16505 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_16505 SM00448 cheY-homologous receiver domain BSQ33_16525 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_16535 SM00052 Putative diguanylate phosphodiesterase BSQ33_16535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_16535 SM00091 PAS domain BSQ33_16535 SM00267 diguanylate cyclase BSQ33_16555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_16555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_16560 SM00354 helix_turn _helix lactose operon repressor BSQ33_16585 SM00382 ATPases associated with a variety of cellular activities BSQ33_16600 SM00354 helix_turn _helix lactose operon repressor BSQ33_16630 SM00271 DnaJ molecular chaperone homology domain BSQ33_16635 SM00052 Putative diguanylate phosphodiesterase BSQ33_16635 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_16635 SM00267 diguanylate cyclase BSQ33_16650 SM00382 ATPases associated with a variety of cellular activities BSQ33_16700 SM00360 RNA recognition motif BSQ33_16725 SM00382 ATPases associated with a variety of cellular activities BSQ33_16730 SM00327 von Willebrand factor (vWF) type A domain BSQ33_16815 SM00387 Histidine kinase-like ATPases BSQ33_16815 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_16815 SM00448 cheY-homologous receiver domain BSQ33_16850 SM00851 MGS-like domain BSQ33_16865 SM00822 BSQ33_16865 BSQ33_16910 SM00316 Ribosomal protein S1-like RNA-binding domain BSQ33_16910 SM00357 Cold shock protein domain BSQ33_16910 SM00955 BSQ33_16910 BSQ33_16915 SM00487 DEAD-like helicases superfamily BSQ33_16915 SM00490 helicase superfamily c-terminal domain BSQ33_16930 SM00829 Enoylreductase BSQ33_16935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_16935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_16940 SM00267 diguanylate cyclase BSQ33_16940 SM01079 BSQ33_16940 BSQ33_16950 SM00382 ATPases associated with a variety of cellular activities BSQ33_16960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_16960 SM00091 PAS domain BSQ33_16960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_16965 SM00052 Putative diguanylate phosphodiesterase BSQ33_16990 SM00421 helix_turn_helix, Lux Regulon BSQ33_17025 SM00487 DEAD-like helicases superfamily BSQ33_17025 SM00490 helicase superfamily c-terminal domain BSQ33_17030 SM00487 DEAD-like helicases superfamily BSQ33_17030 SM00490 helicase superfamily c-terminal domain BSQ33_17090 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_17090 SM00866 BSQ33_17090 BSQ33_17095 SM00450 Rhodanese Homology Domain BSQ33_17105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BSQ33_17130 SM00287 Bacterial SH3 domain homologues BSQ33_17140 SM00382 ATPases associated with a variety of cellular activities BSQ33_17150 SM01321 BSQ33_17150 BSQ33_17190 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ33_17195 SM01092 CO dehydrogenase flavoprotein C-terminal domain BSQ33_17215 SM00382 ATPases associated with a variety of cellular activities BSQ33_17225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_17225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_17235 SM00267 diguanylate cyclase BSQ33_17250 SM00382 ATPases associated with a variety of cellular activities BSQ33_17275 SM00899 BSQ33_17275 BSQ33_17310 SM00382 ATPases associated with a variety of cellular activities BSQ33_17315 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_17330 SM00893 Electron transfer flavoprotein domain BSQ33_17335 SM00893 Electron transfer flavoprotein domain BSQ33_17350 SM00267 diguanylate cyclase BSQ33_17365 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BSQ33_17365 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BSQ33_17375 SM00387 Histidine kinase-like ATPases BSQ33_17375 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_17380 SM00448 cheY-homologous receiver domain BSQ33_17380 SM00862 Transcriptional regulatory protein, C terminal BSQ33_17430 SM00881 CoA binding domain BSQ33_17450 SM00782 PhnA Zinc-Ribbon BSQ33_17480 SM00867 YceI-like domain BSQ33_17495 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ33_17500 SM00382 ATPases associated with a variety of cellular activities BSQ33_17530 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_17530 SM00866 BSQ33_17530 BSQ33_17560 SM00852 Probable molybdopterin binding domain BSQ33_17570 SM00450 Rhodanese Homology Domain BSQ33_17585 SM00861 Transketolase, pyrimidine binding domain BSQ33_17630 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSQ33_17640 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_17780 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_17795 SM00344 helix_turn_helix ASNC type BSQ33_17810 SM00382 ATPases associated with a variety of cellular activities BSQ33_17835 SM00354 helix_turn _helix lactose operon repressor BSQ33_17855 SM00382 ATPases associated with a variety of cellular activities BSQ33_17915 SM01101 BSQ33_17915 BSQ33_17940 SM00487 DEAD-like helicases superfamily BSQ33_17940 SM00490 helicase superfamily c-terminal domain BSQ33_18005 SM00387 Histidine kinase-like ATPases BSQ33_18005 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_18010 SM00448 cheY-homologous receiver domain BSQ33_18010 SM00862 Transcriptional regulatory protein, C terminal BSQ33_18025 SM00354 helix_turn _helix lactose operon repressor BSQ33_18050 SM00633 Glycosyl hydrolase family 10 BSQ33_18080 SM00052 Putative diguanylate phosphodiesterase BSQ33_18080 SM00267 diguanylate cyclase BSQ33_18080 SM00448 cheY-homologous receiver domain BSQ33_18085 SM00387 Histidine kinase-like ATPases BSQ33_18085 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_18085 SM01079 BSQ33_18085 BSQ33_18120 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_18200 SM00382 ATPases associated with a variety of cellular activities BSQ33_18215 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_18215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BSQ33_18225 SM00345 helix_turn_helix gluconate operon transcriptional repressor BSQ33_18225 SM00895 BSQ33_18225 BSQ33_18235 SM00606 Cellulose Binding Domain Type IV BSQ33_18240 SM01217 BSQ33_18240 BSQ33_18250 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_18255 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_18400 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_18400 SM00267 diguanylate cyclase BSQ33_18470 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BSQ33_18510 SM00382 ATPases associated with a variety of cellular activities BSQ33_18560 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_18600 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_18680 SM00420 helix_turn_helix, Deoxyribose operon repressor BSQ33_18680 SM01134 BSQ33_18680 BSQ33_18755 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_18760 SM01217 BSQ33_18760 BSQ33_18780 SM00382 ATPases associated with a variety of cellular activities BSQ33_18785 SM00382 ATPases associated with a variety of cellular activities BSQ33_18810 SM00357 Cold shock protein domain BSQ33_18815 SM00422 helix_turn_helix, mercury resistance BSQ33_18830 SM00382 ATPases associated with a variety of cellular activities BSQ33_18905 SM00855 Phosphoglycerate mutase family BSQ33_18910 SM00632 BSQ33_18910 BSQ33_18910 SM00642 Alpha-amylase domain BSQ33_18950 SM01321 BSQ33_18950 BSQ33_18965 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19005 SM00382 ATPases associated with a variety of cellular activities BSQ33_19020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_19020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_19065 SM00873 B3/4 domain BSQ33_19120 SM00422 helix_turn_helix, mercury resistance BSQ33_19135 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BSQ33_19150 SM00823 Phosphopantetheine attachment site BSQ33_19150 SM00825 Beta-ketoacyl synthase BSQ33_19150 SM00826 BSQ33_19150 BSQ33_19150 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_19155 SM00822 BSQ33_19155 BSQ33_19155 SM00823 Phosphopantetheine attachment site BSQ33_19155 SM00825 Beta-ketoacyl synthase BSQ33_19155 SM00826 BSQ33_19155 BSQ33_19155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_19155 SM01294 BSQ33_19155 BSQ33_19160 SM00822 BSQ33_19160 BSQ33_19160 SM00823 Phosphopantetheine attachment site BSQ33_19160 SM00825 Beta-ketoacyl synthase BSQ33_19160 SM00826 BSQ33_19160 BSQ33_19160 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_19160 SM00829 Enoylreductase BSQ33_19160 SM01294 BSQ33_19160 BSQ33_19165 SM00822 BSQ33_19165 BSQ33_19165 SM00823 Phosphopantetheine attachment site BSQ33_19165 SM00825 Beta-ketoacyl synthase BSQ33_19165 SM00826 BSQ33_19165 BSQ33_19165 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_19165 SM00829 Enoylreductase BSQ33_19170 SM00822 BSQ33_19170 BSQ33_19170 SM00823 Phosphopantetheine attachment site BSQ33_19170 SM00825 Beta-ketoacyl synthase BSQ33_19170 SM00826 BSQ33_19170 BSQ33_19170 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_19170 SM01294 BSQ33_19170 BSQ33_19175 SM00822 BSQ33_19175 BSQ33_19175 SM00823 Phosphopantetheine attachment site BSQ33_19175 SM00825 Beta-ketoacyl synthase BSQ33_19175 SM00826 BSQ33_19175 BSQ33_19175 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BSQ33_19175 SM01294 BSQ33_19175 BSQ33_19180 SM00822 BSQ33_19180 BSQ33_19180 SM00823 Phosphopantetheine attachment site BSQ33_19205 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19225 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19245 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19295 SM00860 SMI1 / KNR4 family BSQ33_19350 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19360 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19375 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19405 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19435 SM00671 Sel1-like repeats. BSQ33_19455 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19505 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19520 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19605 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19625 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19640 SM00860 SMI1 / KNR4 family BSQ33_19660 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19685 SM00912 haemagglutination activity domain BSQ33_19710 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_19745 SM00917 LeuA allosteric (dimerisation) domain BSQ33_19750 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_19765 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19800 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_19875 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_19925 SM00382 ATPases associated with a variety of cellular activities BSQ33_19930 SM00382 ATPases associated with a variety of cellular activities BSQ33_19930 SM01086 C-terminal, D2-small domain, of ClpB protein BSQ33_19995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_19995 SM00897 FIST N domain BSQ33_19995 SM01204 BSQ33_19995 BSQ33_20000 SM00354 helix_turn _helix lactose operon repressor BSQ33_20045 SM00382 ATPases associated with a variety of cellular activities BSQ33_20110 SM00954 Region found in RelA / SpoT proteins BSQ33_20130 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_20220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_20220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_20235 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_20255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_20255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_20315 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_20345 SM00052 Putative diguanylate phosphodiesterase BSQ33_20345 SM00267 diguanylate cyclase BSQ33_20350 SM00382 ATPases associated with a variety of cellular activities BSQ33_20365 SM00470 ParB-like nuclease domain BSQ33_20430 SM00642 Alpha-amylase domain BSQ33_20460 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_20490 SM01266 BSQ33_20490 BSQ33_20545 SM00052 Putative diguanylate phosphodiesterase BSQ33_20545 SM00267 diguanylate cyclase BSQ33_20565 SM00797 Allophanate hydrolase subunit 2 BSQ33_20570 SM00796 Allophanate hydrolase subunit 1 BSQ33_20590 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_20595 SM00924 MgtE intracellular N domain BSQ33_20610 SM00382 ATPases associated with a variety of cellular activities BSQ33_20615 SM00028 Tetratricopeptide repeats BSQ33_20620 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_20625 SM01057 Eukaryotic-type carbonic anhydrase BSQ33_20645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BSQ33_20650 SM00387 Histidine kinase-like ATPases BSQ33_20655 SM00387 Histidine kinase-like ATPases BSQ33_20680 SM00257 Lysin motif BSQ33_20715 SM00529 Helix-turn-helix diphteria tox regulatory element BSQ33_20730 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_20765 SM00344 helix_turn_helix ASNC type BSQ33_20785 SM00098 Alkaline phosphatase homologues BSQ33_20810 SM01236 BSQ33_20810 BSQ33_20820 SM00448 cheY-homologous receiver domain BSQ33_20820 SM00862 Transcriptional regulatory protein, C terminal BSQ33_20825 SM00387 Histidine kinase-like ATPases BSQ33_20825 SM00388 His Kinase A (phosphoacceptor) domain BSQ33_20830 SM00822 BSQ33_20830 BSQ33_20865 SM00870 BSQ33_20865 BSQ33_20875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_20875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_20895 SM01091 Transporter associated domain BSQ33_20915 SM00267 diguanylate cyclase BSQ33_20915 SM01079 BSQ33_20915 BSQ33_20920 SM00530 Helix-turn-helix XRE-family like proteins BSQ33_20930 SM00260 Two component signalling adaptor domain BSQ33_20930 SM00448 cheY-homologous receiver domain BSQ33_20935 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BSQ33_20935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_20970 SM01351 BSQ33_20970 BSQ33_20990 SM00347 helix_turn_helix multiple antibiotic resistance protein BSQ33_21010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_21010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_21015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_21015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_21025 SM00062 Bacterial periplasmic substrate-binding proteins BSQ33_21040 SM00382 ATPases associated with a variety of cellular activities BSQ33_21045 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_21085 SM00886 Stress responsive A/B Barrel Domain BSQ33_21090 SM00344 helix_turn_helix ASNC type BSQ33_21100 SM01038 Beta galactosidase small chain BSQ33_21115 SM00028 Tetratricopeptide repeats BSQ33_21120 SM00327 von Willebrand factor (vWF) type A domain BSQ33_21140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_21140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_21170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BSQ33_21170 SM00382 ATPases associated with a variety of cellular activities BSQ33_21175 SM00357 Cold shock protein domain BSQ33_21190 SM00448 cheY-homologous receiver domain BSQ33_21195 SM00091 PAS domain BSQ33_21210 SM01240 BSQ33_21210 BSQ33_21250 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_21260 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain BSQ33_21315 SM00563 Phosphate acyltransferases BSQ33_21320 SM00458 Ricin-type beta-trefoil BSQ33_21340 SM00342 helix_turn_helix, arabinose operon control protein BSQ33_21385 SM00354 helix_turn _helix lactose operon repressor BSQ33_21390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BSQ33_21390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BSQ33_21400 SM00382 ATPases associated with a variety of cellular activities BSQ33_21410 SM00671 Sel1-like repeats. BSQ33_21425 SM00267 diguanylate cyclase BSQ33_21430 SM00028 Tetratricopeptide repeats BSQ33_21440 SM00422 helix_turn_helix, mercury resistance BSQ33_21450 SM00257 Lysin motif