locus-tag class description MKS89_00005 PF00308 Bacterial dnaA protein MKS89_00005 PF08299 Bacterial dnaA protein helix-turn-helix MKS89_00005 PF11638 DnaA N-terminal domain MKS89_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MKS89_00010 PF02767 DNA polymerase III beta subunit, central domain MKS89_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MKS89_00015 PF02463 RecF/RecN/SMC N terminal domain MKS89_00020 PF01751 Toprim domain MKS89_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_00020 PF00986 DNA gyrase B subunit, carboxyl terminus MKS89_00020 PF00204 DNA gyrase B MKS89_00020 PF18053 DNA gyrase B subunit insert domain MKS89_00025 PF00011 Hsp20/alpha crystallin family MKS89_00030 PF00174 Oxidoreductase molybdopterin binding domain MKS89_00035 PF01794 Ferric reductase like transmembrane component MKS89_00045 PF00155 Aminotransferase class I and II MKS89_00050 PF01425 Amidase MKS89_00055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKS89_00055 PF00289 Biotin carboxylase, N-terminal domain MKS89_00055 PF02785 Biotin carboxylase C-terminal domain MKS89_00070 PF00005 ABC transporter MKS89_00075 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_00085 PF05746 DALR anticodon binding domain MKS89_00085 PF02092 Glycyl-tRNA synthetase beta subunit MKS89_00090 PF02091 Glycyl-tRNA synthetase alpha subunit MKS89_00100 PF01169 Uncharacterized protein family UPF0016 MKS89_00110 PF05638 Type VI secretion system effector, Hcp MKS89_00120 PF01206 Sulfurtransferase TusA MKS89_00130 PF00291 Pyridoxal-phosphate dependent enzyme MKS89_00130 PF00585 C-terminal regulatory domain of Threonine dehydratase MKS89_00135 PF00920 Dehydratase family MKS89_00140 PF01063 Amino-transferase class IV MKS89_00150 PF00205 Thiamine pyrophosphate enzyme, central domain MKS89_00150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKS89_00150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKS89_00155 PF13335 Magnesium chelatase, subunit ChlI C-terminal MKS89_00155 PF01078 Magnesium chelatase, subunit ChlI MKS89_00160 PF01553 Acyltransferase MKS89_00165 PF01323 DSBA-like thioredoxin domain MKS89_00170 PF01636 Phosphotransferase enzyme family MKS89_00175 PF02743 Cache domain MKS89_00175 PF00672 HAMP domain MKS89_00175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_00180 PF06288 Protein of unknown function (DUF1040) MKS89_00185 PF07070 SpoOM protein MKS89_00190 PF03006 Haemolysin-III related MKS89_00195 PF02386 Cation transport protein MKS89_00200 PF02080 TrkA-C domain MKS89_00200 PF02254 TrkA-N domain MKS89_00205 PF01029 NusB family MKS89_00205 PF01189 16S rRNA methyltransferase RsmB/F MKS89_00210 PF00551 Formyl transferase MKS89_00210 PF02911 Formyl transferase, C-terminal domain MKS89_00215 PF01327 Polypeptide deformylase MKS89_00220 PF02481 DNA recombination-mediator protein A MKS89_00220 PF17782 DprA winged helix domain MKS89_00225 PF04361 Protein of unknown function (DUF494) MKS89_00230 PF01396 Topoisomerase DNA binding C4 zinc finger MKS89_00235 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MKS89_00235 PF02222 ATP-grasp domain MKS89_00240 PF00731 AIR carboxylase MKS89_00245 PF01300 Telomere recombination MKS89_00250 PF01218 Coproporphyrinogen III oxidase MKS89_00255 PF08501 Shikimate dehydrogenase substrate binding domain MKS89_00255 PF01488 Shikimate / quinate 5-dehydrogenase MKS89_00255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MKS89_00265 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_00300 PF01797 Transposase IS200 like MKS89_00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_00305 PF03466 LysR substrate binding domain MKS89_00310 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MKS89_00310 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MKS89_00315 PF04380 Membrane fusogenic activity MKS89_00320 PF00873 AcrB/AcrD/AcrF family MKS89_00325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_00330 PF00580 UvrD/REP helicase N-terminal domain MKS89_00330 PF13361 UvrD-like helicase C-terminal domain MKS89_00360 PF00005 ABC transporter MKS89_00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_00365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_00370 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_00375 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_00375 PF12911 N-terminal TM domain of oligopeptide transport permease C MKS89_00385 PF01497 Periplasmic binding protein MKS89_00390 PF02653 Branched-chain amino acid transport system / permease component MKS89_00395 PF02653 Branched-chain amino acid transport system / permease component MKS89_00400 PF00005 ABC transporter MKS89_00405 PF13407 Periplasmic binding protein domain MKS89_00410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKS89_00410 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_00415 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ MKS89_00420 PF01432 Peptidase family M3 MKS89_00435 PF13361 UvrD-like helicase C-terminal domain MKS89_00435 PF00580 UvrD/REP helicase N-terminal domain MKS89_00440 PF04266 ASCH domain MKS89_00455 PF01810 LysE type translocator MKS89_00460 PF00892 EamA-like transporter family MKS89_00465 PF09382 RQC domain MKS89_00465 PF16124 RecQ zinc-binding MKS89_00465 PF00570 HRDC domain MKS89_00465 PF00271 Helicase conserved C-terminal domain MKS89_00465 PF00270 DEAD/DEAH box helicase MKS89_00485 PF02378 Phosphotransferase system, EIIC MKS89_00490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_00495 PF02378 Phosphotransferase system, EIIC MKS89_00500 PF00232 Glycosyl hydrolase family 1 MKS89_00505 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MKS89_00510 PF00356 Bacterial regulatory proteins, lacI family MKS89_00520 PF02595 Glycerate kinase family MKS89_00525 PF11975 Family 4 glycosyl hydrolase C-terminal domain MKS89_00525 PF02056 Family 4 glycosyl hydrolase MKS89_00530 PF00367 phosphotransferase system, EIIB MKS89_00530 PF02378 Phosphotransferase system, EIIC MKS89_00535 PF07702 UTRA domain MKS89_00535 PF00392 Bacterial regulatory proteins, gntR family MKS89_00545 PF16363 GDP-mannose 4,6 dehydratase MKS89_00550 PF00483 Nucleotidyl transferase MKS89_00555 PF04321 RmlD substrate binding domain MKS89_00560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MKS89_00600 PF08340 Domain of unknown function (DUF1732) MKS89_00600 PF03755 YicC-like family, N-terminal region MKS89_00605 PF01138 3' exoribonuclease family, domain 1 MKS89_00605 PF03725 3' exoribonuclease family, domain 2 MKS89_00610 PF00156 Phosphoribosyl transferase domain MKS89_00615 PF03279 Bacterial lipid A biosynthesis acyltransferase MKS89_00620 PF03279 Bacterial lipid A biosynthesis acyltransferase MKS89_00625 PF00440 Bacterial regulatory proteins, tetR family MKS89_00630 PF02441 Flavoprotein MKS89_00630 PF04127 DNA / pantothenate metabolism flavoprotein MKS89_00635 PF00672 HAMP domain MKS89_00635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_00635 PF02743 Cache domain MKS89_00640 PF04002 RadC-like JAB domain MKS89_00645 PF00830 Ribosomal L28 family MKS89_00650 PF00471 Ribosomal protein L33 MKS89_00660 PF06827 Zinc finger found in FPG and IleRS MKS89_00660 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MKS89_00660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MKS89_00665 PF01467 Cytidylyltransferase-like MKS89_00670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MKS89_00675 PF00535 Glycosyl transferase family 2 MKS89_00680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MKS89_00695 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) MKS89_00700 PF04488 Glycosyltransferase sugar-binding region containing DXD motif MKS89_00715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) MKS89_00725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MKS89_00725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MKS89_00725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MKS89_00730 PF01370 NAD dependent epimerase/dehydratase family MKS89_00740 PF02719 Polysaccharide biosynthesis protein MKS89_00745 PF01370 NAD dependent epimerase/dehydratase family MKS89_00750 PF02397 Bacterial sugar transferase MKS89_00760 PF06082 Exopolysaccharide biosynthesis protein YbjH MKS89_00770 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF MKS89_00785 PF10531 SLBB domain MKS89_00785 PF18412 Outer-membrane lipoprotein Wza C-terminal domain MKS89_00785 PF02563 Polysaccharide biosynthesis/export protein MKS89_00800 PF16363 GDP-mannose 4,6 dehydratase MKS89_00825 PF16363 GDP-mannose 4,6 dehydratase MKS89_00830 PF01370 NAD dependent epimerase/dehydratase family MKS89_00850 PF00535 Glycosyl transferase family 2 MKS89_00855 PF01050 Mannose-6-phosphate isomerase MKS89_00855 PF00483 Nucleotidyl transferase MKS89_00860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKS89_00860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKS89_00860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKS89_00860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKS89_00865 PF02397 Bacterial sugar transferase MKS89_00870 PF04222 Protein of unknown function (DUF416) MKS89_00875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_00880 PF03167 Uracil DNA glycosylase superfamily MKS89_00885 PF00216 Bacterial DNA-binding protein MKS89_00900 PF00155 Aminotransferase class I and II MKS89_00900 PF00392 Bacterial regulatory proteins, gntR family MKS89_00905 PF00072 Response regulator receiver domain MKS89_00905 PF00486 Transcriptional regulatory protein, C terminal MKS89_00910 PF00512 His Kinase A (phospho-acceptor) domain MKS89_00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_00910 PF00672 HAMP domain MKS89_00915 PF07690 Major Facilitator Superfamily MKS89_00920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_00920 PF00529 HlyD membrane-fusion protein of T1SS MKS89_00925 PF02321 Outer membrane efflux protein MKS89_00935 PF00270 DEAD/DEAH box helicase MKS89_00935 PF17191 RecG wedge domain MKS89_00935 PF00271 Helicase conserved C-terminal domain MKS89_00940 PF13291 ACT domain MKS89_00940 PF04607 Region found in RelA / SpoT proteins MKS89_00940 PF02824 TGS domain MKS89_00945 PF01192 RNA polymerase Rpb6 MKS89_00950 PF00625 Guanylate kinase MKS89_00955 PF00375 Sodium:dicarboxylate symporter family MKS89_00960 PF02592 Putative vitamin uptake transporter MKS89_00965 PF00474 Sodium:solute symporter family MKS89_00975 PF00196 Bacterial regulatory proteins, luxR family MKS89_00975 PF00072 Response regulator receiver domain MKS89_00980 PF02683 Cytochrome C biogenesis protein transmembrane region MKS89_00980 PF11412 Disulphide bond corrector protein DsbC MKS89_00985 PF10415 Fumarase C C-terminus MKS89_00985 PF00206 Lyase MKS89_00990 PF00990 Diguanylate cyclase, GGDEF domain MKS89_00990 PF05231 MASE1 MKS89_00990 PF08447 PAS fold MKS89_00990 PF08448 PAS fold MKS89_00990 PF13426 PAS domain MKS89_00990 PF00563 EAL domain MKS89_00995 PF04186 FxsA cytoplasmic membrane protein MKS89_01000 PF00588 SpoU rRNA Methylase family MKS89_01005 PF00512 His Kinase A (phospho-acceptor) domain MKS89_01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_01005 PF00672 HAMP domain MKS89_01005 PF16527 Two-component sensor protein CpxA, periplasmic domain MKS89_01010 PF00486 Transcriptional regulatory protein, C terminal MKS89_01010 PF00072 Response regulator receiver domain MKS89_01020 PF01545 Cation efflux family MKS89_01020 PF16916 Dimerisation domain of Zinc Transporter MKS89_01025 PF04389 Peptidase family M28 MKS89_01025 PF04151 Bacterial pre-peptidase C-terminal domain MKS89_01030 PF00365 Phosphofructokinase MKS89_01035 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded MKS89_01040 PF06005 Cell division protein ZapB MKS89_01045 PF02219 Methylenetetrahydrofolate reductase MKS89_01050 PF00696 Amino acid kinase family MKS89_01050 PF00742 Homoserine dehydrogenase MKS89_01050 PF03447 Homoserine dehydrogenase, NAD binding domain MKS89_01055 PF01053 Cys/Met metabolism PLP-dependent enzyme MKS89_01060 PF01340 Met Apo-repressor, MetJ MKS89_01070 PF00390 Malic enzyme, N-terminal domain MKS89_01070 PF03949 Malic enzyme, NAD binding domain MKS89_01075 PF01197 Ribosomal protein L31 MKS89_01080 PF17764 3′ DNA-binding domain (3′BD) MKS89_01080 PF00270 DEAD/DEAH box helicase MKS89_01080 PF18074 Primosomal protein N C-terminal domain MKS89_01080 PF00271 Helicase conserved C-terminal domain MKS89_01080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MKS89_01085 PF00356 Bacterial regulatory proteins, lacI family MKS89_01095 PF00227 Proteasome subunit MKS89_01100 PF10431 C-terminal, D2-small domain, of ClpB protein MKS89_01100 PF07724 AAA domain (Cdc48 subfamily) MKS89_01100 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_01105 PF01040 UbiA prenyltransferase family MKS89_01110 PF03737 Aldolase/RraA MKS89_01115 PF01554 MatE MKS89_01120 PF00121 Triosephosphate isomerase MKS89_01140 PF00166 Chaperonin 10 Kd subunit MKS89_01145 PF00118 TCP-1/cpn60 chaperonin family MKS89_01150 PF00005 ABC transporter MKS89_01155 PF04055 Radical SAM superfamily MKS89_01160 PF01132 Elongation factor P (EF-P) OB domain MKS89_01160 PF08207 Elongation factor P (EF-P) KOW-like domain MKS89_01160 PF09285 Elongation factor P, C-terminal MKS89_01165 PF02313 Fumarate reductase subunit D MKS89_01170 PF02300 Fumarate reductase subunit C MKS89_01175 PF13183 4Fe-4S dicluster domain MKS89_01175 PF13085 2Fe-2S iron-sulfur cluster binding domain MKS89_01180 PF02910 Fumarate reductase flavoprotein C-term MKS89_01180 PF00890 FAD binding domain MKS89_01185 PF00152 tRNA synthetases class II (D, K and N) MKS89_01190 PF00581 Rhodanese-like domain MKS89_01195 PF02556 Preprotein translocase subunit SecB MKS89_01200 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MKS89_01200 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MKS89_01205 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_01205 PF06426 Serine acetyltransferase, N-terminal MKS89_01210 PF03551 Transcriptional regulator PadR-like family MKS89_01210 PF10400 Virulence activator alpha C-term MKS89_01215 PF00311 Phosphoenolpyruvate carboxylase MKS89_01220 PF07687 Peptidase dimerisation domain MKS89_01220 PF01546 Peptidase family M20/M25/M40 MKS89_01225 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKS89_01225 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKS89_01230 PF00696 Amino acid kinase family MKS89_01235 PF00764 Arginosuccinate synthase MKS89_01250 PF00462 Glutaredoxin MKS89_01250 PF08534 Redoxin MKS89_01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_01255 PF03466 LysR substrate binding domain MKS89_01260 PF00912 Transglycosylase MKS89_01260 PF00905 Penicillin binding protein transpeptidase domain MKS89_01260 PF17092 Penicillin-binding protein OB-like domain MKS89_01285 PF01202 Shikimate kinase MKS89_01290 PF01761 3-dehydroquinate synthase MKS89_01300 PF02086 D12 class N6 adenine-specific DNA methyltransferase MKS89_01305 PF00834 Ribulose-phosphate 3 epimerase family MKS89_01310 PF13419 Haloacid dehalogenase-like hydrolase MKS89_01315 PF00579 tRNA synthetases class I (W and Y) MKS89_01320 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_01330 PF02013 Cellulose or protein binding domain MKS89_01330 PF00150 Cellulase (glycosyl hydrolase family 5) MKS89_01335 PF00942 Cellulose binding domain MKS89_01335 PF12891 Glycoside hydrolase family 44 MKS89_01345 PF01717 Cobalamin-independent synthase, Catalytic domain MKS89_01350 PF00534 Glycosyl transferases group 1 MKS89_01350 PF13477 Glycosyl transferase 4-like MKS89_01370 PF00005 ABC transporter MKS89_01375 PF00117 Glutamine amidotransferase class-I MKS89_01380 PF00202 Aminotransferase class-III MKS89_01385 PF04958 Arginine N-succinyltransferase beta subunit MKS89_01395 PF00027 Cyclic nucleotide-binding domain MKS89_01395 PF13545 Crp-like helix-turn-helix domain MKS89_01400 PF00485 Phosphoribulokinase / Uridine kinase family MKS89_01405 PF06794 Uncharacterised protein family (UPF0270) MKS89_01410 PF00561 alpha/beta hydrolase fold MKS89_01420 PF00005 ABC transporter MKS89_01420 PF12848 ABC transporter MKS89_01425 PF02525 Flavodoxin-like fold MKS89_01430 PF00999 Sodium/hydrogen exchanger family MKS89_01430 PF02254 TrkA-N domain MKS89_01440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKS89_01445 PF01112 Asparaginase MKS89_01450 PF00709 Adenylosuccinate synthetase MKS89_01455 PF08238 Sel1 repeat MKS89_01460 PF17876 Cold shock domain MKS89_01460 PF08461 Ribonuclease R winged-helix domain MKS89_01460 PF08206 Ribonuclease B OB domain MKS89_01460 PF00773 RNB domain MKS89_01460 PF00575 S1 RNA binding domain MKS89_01465 PF00588 SpoU rRNA Methylase family MKS89_01465 PF08032 RNA 2'-O ribose methyltransferase substrate binding MKS89_01470 PF00338 Ribosomal protein S10p/S20e MKS89_01475 PF00297 Ribosomal protein L3 MKS89_01480 PF00573 Ribosomal protein L4/L1 family MKS89_01485 PF00276 Ribosomal protein L23 MKS89_01490 PF00181 Ribosomal Proteins L2, RNA binding domain MKS89_01490 PF03947 Ribosomal Proteins L2, C-terminal domain MKS89_01495 PF00203 Ribosomal protein S19 MKS89_01500 PF00237 Ribosomal protein L22p/L17e MKS89_01505 PF00189 Ribosomal protein S3, C-terminal domain MKS89_01505 PF07650 KH domain MKS89_01510 PF00252 Ribosomal protein L16p/L10e MKS89_01515 PF00831 Ribosomal L29 protein MKS89_01520 PF00366 Ribosomal protein S17 MKS89_01525 PF00238 Ribosomal protein L14p/L23e MKS89_01530 PF00467 KOW motif MKS89_01530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MKS89_01535 PF00673 ribosomal L5P family C-terminus MKS89_01535 PF00281 Ribosomal protein L5 MKS89_01540 PF00253 Ribosomal protein S14p/S29e MKS89_01545 PF00410 Ribosomal protein S8 MKS89_01550 PF00347 Ribosomal protein L6 MKS89_01555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MKS89_01560 PF00333 Ribosomal protein S5, N-terminal domain MKS89_01560 PF03719 Ribosomal protein S5, C-terminal domain MKS89_01565 PF00327 Ribosomal protein L30p/L7e MKS89_01570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MKS89_01575 PF00344 SecY translocase MKS89_01580 PF00444 Ribosomal protein L36 MKS89_01585 PF00416 Ribosomal protein S13/S18 MKS89_01590 PF00411 Ribosomal protein S11 MKS89_01595 PF01479 S4 domain MKS89_01595 PF00163 Ribosomal protein S4/S9 N-terminal domain MKS89_01600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MKS89_01600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MKS89_01600 PF01000 RNA polymerase Rpb3/RpoA insert domain MKS89_01605 PF01196 Ribosomal protein L17 MKS89_01615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKS89_01615 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MKS89_01625 PF13673 Acetyltransferase (GNAT) domain MKS89_01630 PF02872 5'-nucleotidase, C-terminal domain MKS89_01630 PF00149 Calcineurin-like phosphoesterase MKS89_01635 PF10414 Sirohaem synthase dimerisation region MKS89_01635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_01635 PF14824 Sirohaem biosynthesis protein central MKS89_01640 PF01507 Phosphoadenosine phosphosulfate reductase family MKS89_01645 PF00009 Elongation factor Tu GTP binding domain MKS89_01650 PF02080 TrkA-C domain MKS89_01650 PF03600 Citrate transporter MKS89_01675 PF00005 ABC transporter MKS89_01690 PF01625 Peptide methionine sulfoxide reductase MKS89_01695 PF07244 Surface antigen variable number repeat MKS89_01695 PF01103 Surface antigen MKS89_01695 PF17243 POTRA domain TamA domain 1 MKS89_01700 PF04357 TamB, inner membrane protein subunit of TAM complex MKS89_01705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like MKS89_01710 PF00719 Inorganic pyrophosphatase MKS89_01715 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain MKS89_01720 PF08245 Mur ligase middle domain MKS89_01720 PF02875 Mur ligase family, glutamate ligase domain MKS89_01720 PF01225 Mur ligase family, catalytic domain MKS89_01725 PF02441 Flavoprotein MKS89_01735 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_01740 PF00005 ABC transporter MKS89_01745 PF04751 Protein of unknown function (DUF615) MKS89_01750 PF01523 Putative modulator of DNA gyrase MKS89_01770 PF05638 Type VI secretion system effector, Hcp MKS89_01775 PF00571 CBS domain MKS89_01775 PF01769 Divalent cation transporter MKS89_01775 PF03448 MgtE intracellular N domain MKS89_01780 PF00381 PTS HPr component phosphorylation site MKS89_01785 PF03668 P-loop ATPase protein family MKS89_01790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_01795 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MKS89_01800 PF00309 Sigma-54 factor, Activator interacting domain (AID) MKS89_01800 PF04963 Sigma-54 factor, core binding domain MKS89_01800 PF04552 Sigma-54, DNA binding domain MKS89_01805 PF12399 Branched-chain amino acid ATP-binding cassette transporter MKS89_01805 PF00005 ABC transporter MKS89_01825 PF00571 CBS domain MKS89_01825 PF01380 SIS domain MKS89_01830 PF01699 Sodium/calcium exchanger protein MKS89_01835 PF00005 ABC transporter MKS89_01840 PF02405 Permease MlaE MKS89_01845 PF02470 MlaD protein MKS89_01850 PF05494 MlaC protein MKS89_01860 PF01722 BolA-like protein MKS89_01865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKS89_01870 PF01553 Acyltransferase MKS89_01875 PF01042 Endoribonuclease L-PSP MKS89_01880 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MKS89_01880 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MKS89_01885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKS89_01885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKS89_01890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKS89_01890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKS89_01895 PF03123 CAT RNA binding domain MKS89_01895 PF00874 PRD domain MKS89_01900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_01900 PF00367 phosphotransferase system, EIIB MKS89_01900 PF02378 Phosphotransferase system, EIIC MKS89_01905 PF00232 Glycosyl hydrolase family 1 MKS89_01910 PF02562 PhoH-like protein MKS89_01910 PF13638 PIN domain MKS89_01920 PF00271 Helicase conserved C-terminal domain MKS89_01920 PF00176 SNF2 family N-terminal domain MKS89_01920 PF18339 RapA N-terminal Tudor like domain 1 MKS89_01920 PF18337 RapA N-terminal Tudor like domain MKS89_01920 PF12137 RNA polymerase recycling family C-terminal MKS89_01930 PF00849 RNA pseudouridylate synthase MKS89_01935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_01935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_01940 PF05987 Bacterial protein of unknown function (DUF898) MKS89_01945 PF01435 Peptidase family M48 MKS89_01950 PF08264 Anticodon-binding domain of tRNA MKS89_01950 PF00133 tRNA synthetases class I (I, L, M and V) MKS89_01950 PF10458 Valyl tRNA synthetase tRNA binding arm MKS89_01955 PF04364 DNA polymerase III chi subunit, HolC MKS89_01960 PF02789 Cytosol aminopeptidase family, N-terminal domain MKS89_01960 PF00883 Cytosol aminopeptidase family, catalytic domain MKS89_01965 PF03739 Lipopolysaccharide export system permease LptF/LptG MKS89_01970 PF03739 Lipopolysaccharide export system permease LptF/LptG MKS89_01990 PF01966 HD domain MKS89_02050 PF00694 Aconitase C-terminal domain MKS89_02055 PF00330 Aconitase family (aconitate hydratase) MKS89_02060 PF00180 Isocitrate/isopropylmalate dehydrogenase MKS89_02065 PF08502 LeuA allosteric (dimerisation) domain MKS89_02065 PF00682 HMGL-like MKS89_02080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_02080 PF03466 LysR substrate binding domain MKS89_02085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKS89_02085 PF00205 Thiamine pyrophosphate enzyme, central domain MKS89_02085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKS89_02090 PF10369 Small subunit of acetolactate synthase MKS89_02095 PF00155 Aminotransferase class I and II MKS89_02095 PF00392 Bacterial regulatory proteins, gntR family MKS89_02100 PF00202 Aminotransferase class-III MKS89_02105 PF00171 Aldehyde dehydrogenase family MKS89_02110 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_02120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_02125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_02125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_02125 PF01842 ACT domain MKS89_02130 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MKS89_02135 PF01812 5-formyltetrahydrofolate cyclo-ligase family MKS89_02145 PF05164 Cell division protein ZapA MKS89_02150 PF03695 Uncharacterised protein family (UPF0149) MKS89_02155 PF01494 FAD binding domain MKS89_02160 PF01494 FAD binding domain MKS89_02180 PF03937 Flavinator of succinate dehydrogenase MKS89_02190 PF02910 Fumarate reductase flavoprotein C-term MKS89_02190 PF00890 FAD binding domain MKS89_02195 PF04542 Sigma-70 region 2 MKS89_02195 PF08281 Sigma-70, region 4 MKS89_02200 PF03872 Anti sigma-E protein RseA, N-terminal domain MKS89_02200 PF03873 Anti sigma-E protein RseA, C-terminal domain MKS89_02205 PF03888 MucB/RseB N-terminal domain MKS89_02205 PF17188 MucB/RseB C-terminal domain MKS89_02215 PF00679 Elongation factor G C-terminus MKS89_02215 PF00009 Elongation factor Tu GTP binding domain MKS89_02215 PF03144 Elongation factor Tu domain 2 MKS89_02215 PF06421 GTP-binding protein LepA C-terminus MKS89_02220 PF10502 Signal peptidase, peptidase S26 MKS89_02225 PF00035 Double-stranded RNA binding motif MKS89_02225 PF14622 Ribonuclease-III-like MKS89_02230 PF01926 50S ribosome-binding GTPase MKS89_02230 PF07650 KH domain MKS89_02235 PF02565 Recombination protein O C terminal MKS89_02235 PF11967 Recombination protein O N terminal MKS89_02240 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ MKS89_02245 PF01648 4'-phosphopantetheinyl transferase superfamily MKS89_02250 PF00512 His Kinase A (phospho-acceptor) domain MKS89_02250 PF00072 Response regulator receiver domain MKS89_02250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKS89_02250 PF01627 Hpt domain MKS89_02250 PF00672 HAMP domain MKS89_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_02255 PF05958 tRNA (Uracil-5-)-methyltransferase MKS89_02255 PF01938 TRAM domain MKS89_02260 PF02824 TGS domain MKS89_02260 PF13291 ACT domain MKS89_02260 PF04607 Region found in RelA / SpoT proteins MKS89_02265 PF03819 MazG nucleotide pyrophosphohydrolase domain MKS89_02270 PF06418 CTP synthase N-terminus MKS89_02270 PF00117 Glutamine amidotransferase class-I MKS89_02275 PF00113 Enolase, C-terminal TIM barrel domain MKS89_02275 PF03952 Enolase, N-terminal domain MKS89_02280 PF12627 Probable RNA and SrmB- binding site of polymerase A MKS89_02280 PF01743 Poly A polymerase head domain MKS89_02280 PF01966 HD domain MKS89_02285 PF08239 Bacterial SH3 domain MKS89_02290 PF01384 Phosphate transporter family MKS89_02295 PF01865 Protein of unknown function DUF47 MKS89_02300 PF01928 CYTH domain MKS89_02305 PF12729 Four helix bundle sensory module for signal transduction MKS89_02305 PF00672 HAMP domain MKS89_02305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_02310 PF03710 Glutamate-ammonia ligase adenylyltransferase MKS89_02310 PF08335 GlnD PII-uridylyltransferase MKS89_02315 PF00294 pfkB family carbohydrate kinase MKS89_02315 PF01467 Cytidylyltransferase-like MKS89_02320 PF02321 Outer membrane efflux protein MKS89_02325 PF00293 NUDIX domain MKS89_02330 PF06853 Protein of unknown function (DUF1249) MKS89_02335 PF00149 Calcineurin-like phosphoesterase MKS89_02340 PF05728 Uncharacterised protein family (UPF0227) MKS89_02345 PF00986 DNA gyrase B subunit, carboxyl terminus MKS89_02345 PF01751 Toprim domain MKS89_02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_02345 PF00204 DNA gyrase B MKS89_02350 PF00521 DNA gyrase/topoisomerase IV, subunit A MKS89_02350 PF03989 DNA gyrase C-terminal domain, beta-propeller MKS89_02365 PF05114 Protein of unknown function (DUF692) MKS89_02380 PF08281 Sigma-70, region 4 MKS89_02380 PF04542 Sigma-70 region 2 MKS89_02385 PF03884 DNA gyrase inhibitor YacG MKS89_02390 PF07072 Cell division protein MKS89_02395 PF01121 Dephospho-CoA kinase MKS89_02400 PF01478 Type IV leader peptidase family MKS89_02400 PF06750 Bacterial Peptidase A24 N-terminal domain MKS89_02405 PF00482 Type II secretion system (T2SS), protein F MKS89_02410 PF00437 Type II/IV secretion system protein MKS89_02410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain MKS89_02430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain MKS89_02430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain MKS89_02435 PF01510 N-acetylmuramoyl-L-alanine amidase MKS89_02440 PF00258 Flavodoxin MKS89_02445 PF00589 Phage integrase family MKS89_02445 PF02899 Phage integrase, N-terminal SAM-like domain MKS89_02450 PF13098 Thioredoxin-like domain MKS89_02450 PF10411 Disulfide bond isomerase protein N-terminus MKS89_02455 PF01368 DHH family MKS89_02455 PF02272 DHHA1 domain MKS89_02455 PF17768 RecJ OB domain MKS89_02470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKS89_02470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKS89_02490 PF07690 Major Facilitator Superfamily MKS89_02495 PF01494 FAD binding domain MKS89_02505 PF00248 Aldo/keto reductase family MKS89_02510 PF00106 short chain dehydrogenase MKS89_02520 PF07729 FCD domain MKS89_02520 PF00392 Bacterial regulatory proteins, gntR family MKS89_02525 PF17831 Pyruvate dehydrogenase E1 component middle domain MKS89_02525 PF00456 Transketolase, thiamine diphosphate binding domain MKS89_02530 PF02817 e3 binding domain MKS89_02530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKS89_02530 PF00364 Biotin-requiring enzyme MKS89_02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_02535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKS89_02540 PF00440 Bacterial regulatory proteins, tetR family MKS89_02545 PF00156 Phosphoribosyl transferase domain MKS89_02550 PF00484 Carbonic anhydrase MKS89_02555 PF00005 ABC transporter MKS89_02560 PF01061 ABC-2 type transporter MKS89_02565 PF02615 Malate/L-lactate dehydrogenase MKS89_02570 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MKS89_02575 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_02580 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_02585 PF00596 Class II Aldolase and Adducin N-terminal domain MKS89_02590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKS89_02590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKS89_02595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MKS89_02600 PF09339 IclR helix-turn-helix domain MKS89_02600 PF01614 Bacterial transcriptional regulator MKS89_02605 PF01261 Xylose isomerase-like TIM barrel MKS89_02610 PF00005 ABC transporter MKS89_02615 PF02653 Branched-chain amino acid transport system / permease component MKS89_02640 PF02569 Pantoate-beta-alanine ligase MKS89_02645 PF02548 Ketopantoate hydroxymethyltransferase MKS89_02650 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MKS89_02655 PF01743 Poly A polymerase head domain MKS89_02655 PF12626 Polymerase A arginine-rich C-terminus MKS89_02655 PF12627 Probable RNA and SrmB- binding site of polymerase A MKS89_02660 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKS89_02665 PF01258 Prokaryotic dksA/traR C4-type zinc finger MKS89_02670 PF03749 Sugar fermentation stimulation protein RE domain MKS89_02670 PF17746 SfsA N-terminal OB domain MKS89_02675 PF00270 DEAD/DEAH box helicase MKS89_02675 PF00271 Helicase conserved C-terminal domain MKS89_02675 PF08482 ATP-dependent helicase C-terminal MKS89_02675 PF04408 Helicase associated domain (HA2) MKS89_02680 PF00912 Transglycosylase MKS89_02680 PF00905 Penicillin binding protein transpeptidase domain MKS89_02680 PF14814 Bifunctional transglycosylase second domain MKS89_02685 PF00330 Aconitase family (aconitate hydratase) MKS89_02685 PF06434 Aconitate hydratase 2 N-terminus MKS89_02685 PF11791 Aconitate B N-terminal domain MKS89_02695 PF06062 Uncharacterised protein family (UPF0231) MKS89_02700 PF00543 Nitrogen regulatory protein P-II MKS89_02705 PF00909 Ammonium Transporter Family MKS89_02710 PF05175 Methyltransferase small domain MKS89_02710 PF08468 Methyltransferase small domain N-terminal MKS89_02715 PF01594 AI-2E family transporter MKS89_02720 PF00202 Aminotransferase class-III MKS89_02725 PF01521 Iron-sulphur cluster biosynthesis MKS89_02730 PF01476 LysM domain MKS89_02730 PF08525 Opacity-associated protein A N-terminal motif MKS89_02730 PF01551 Peptidase family M23 MKS89_02735 PF01479 S4 domain MKS89_02735 PF00579 tRNA synthetases class I (W and Y) MKS89_02740 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family MKS89_02745 PF13609 Gram-negative porin MKS89_02750 PF01272 Transcription elongation factor, GreA/GreB, C-term MKS89_02750 PF03449 Transcription elongation factor, N-terminal MKS89_02755 PF01985 CRS1 / YhbY (CRM) domain MKS89_02760 PF01728 FtsJ-like methyltransferase MKS89_02765 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_02765 PF01434 Peptidase family M41 MKS89_02765 PF06480 FtsH Extracellular MKS89_02765 PF17862 AAA+ lid domain MKS89_02770 PF00809 Pterin binding enzyme MKS89_02775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKS89_02775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKS89_02775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKS89_02775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKS89_02780 PF03840 Preprotein translocase SecG subunit MKS89_02795 PF02576 RimP N-terminal domain MKS89_02795 PF17384 RimP C-terminal SH3 domain MKS89_02800 PF08529 NusA N-terminal domain MKS89_02800 PF13184 NusA-like KH domain MKS89_02800 PF00575 S1 RNA binding domain MKS89_02805 PF00009 Elongation factor Tu GTP binding domain MKS89_02805 PF11987 Translation-initiation factor 2 MKS89_02805 PF08364 Bacterial translation initiation factor IF-2 associated region MKS89_02805 PF04760 Translation initiation factor IF-2, N-terminal region MKS89_02810 PF02033 Ribosome-binding factor A MKS89_02815 PF09157 Pseudouridine synthase II TruB, C-terminal MKS89_02815 PF16198 tRNA pseudouridylate synthase B C-terminal domain MKS89_02815 PF01509 TruB family pseudouridylate synthase (N terminal domain) MKS89_02820 PF00312 Ribosomal protein S15 MKS89_02825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MKS89_02825 PF03725 3' exoribonuclease family, domain 2 MKS89_02825 PF00575 S1 RNA binding domain MKS89_02825 PF01138 3' exoribonuclease family, domain 1 MKS89_02825 PF00013 KH domain MKS89_02830 PF07719 Tetratricopeptide repeat MKS89_02830 PF13181 Tetratricopeptide repeat MKS89_02835 PF01554 MatE MKS89_02840 PF01136 Peptidase family U32 MKS89_02845 PF01136 Peptidase family U32 MKS89_02850 PF00563 EAL domain MKS89_02850 PF00990 Diguanylate cyclase, GGDEF domain MKS89_02850 PF03707 Bacterial signalling protein N terminal repeat MKS89_02855 PF02036 SCP-2 sterol transfer family MKS89_02860 PF13508 Acetyltransferase (GNAT) domain MKS89_02870 PF00583 Acetyltransferase (GNAT) family MKS89_02875 PF02397 Bacterial sugar transferase MKS89_02910 PF01501 Glycosyl transferase family 8 MKS89_02910 PF00535 Glycosyl transferase family 2 MKS89_02915 PF00534 Glycosyl transferases group 1 MKS89_02915 PF13439 Glycosyltransferase Family 4 MKS89_02920 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_02925 PF13439 Glycosyltransferase Family 4 MKS89_02925 PF00534 Glycosyl transferases group 1 MKS89_02950 PF01522 Polysaccharide deacetylase MKS89_02965 PF13609 Gram-negative porin MKS89_02970 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MKS89_02975 PF01451 Low molecular weight phosphotyrosine protein phosphatase MKS89_02985 PF00486 Transcriptional regulatory protein, C terminal MKS89_02985 PF00072 Response regulator receiver domain MKS89_02995 PF16658 Class II release factor RF3, C-terminal domain MKS89_02995 PF03144 Elongation factor Tu domain 2 MKS89_02995 PF00009 Elongation factor Tu GTP binding domain MKS89_03000 PF00270 DEAD/DEAH box helicase MKS89_03000 PF00271 Helicase conserved C-terminal domain MKS89_03005 PF05175 Methyltransferase small domain MKS89_03010 PF05525 Branched-chain amino acid transport protein MKS89_03020 PF00152 tRNA synthetases class II (D, K and N) MKS89_03020 PF01336 OB-fold nucleic acid binding domain MKS89_03025 PF02954 Bacterial regulatory protein, Fis family MKS89_03025 PF00072 Response regulator receiver domain MKS89_03025 PF00158 Sigma-54 interaction domain MKS89_03035 PF00248 Aldo/keto reductase family MKS89_03040 PF02976 DNA mismatch repair enzyme MutH MKS89_03045 PF00293 NUDIX domain MKS89_03050 PF02896 PEP-utilising enzyme, TIM barrel domain MKS89_03050 PF00391 PEP-utilising enzyme, mobile domain MKS89_03050 PF05524 PEP-utilising enzyme, N-terminal MKS89_03050 PF01590 GAF domain MKS89_03055 PF01925 Sulfite exporter TauE/SafE MKS89_03060 PF01790 Prolipoprotein diacylglyceryl transferase MKS89_03065 PF00303 Thymidylate synthase MKS89_03070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_03070 PF03466 LysR substrate binding domain MKS89_03075 PF01022 Bacterial regulatory protein, arsR family MKS89_03080 PF01649 Ribosomal protein S20 MKS89_03085 PF03023 Lipid II flippase MurJ MKS89_03090 PF01687 Riboflavin kinase MKS89_03090 PF06574 FAD synthetase MKS89_03095 PF06827 Zinc finger found in FPG and IleRS MKS89_03095 PF00133 tRNA synthetases class I (I, L, M and V) MKS89_03095 PF08264 Anticodon-binding domain of tRNA MKS89_03100 PF01252 Signal peptidase (SPase) II MKS89_03105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKS89_03110 PF02401 LytB protein MKS89_03115 PF02554 Carbon starvation protein CstA MKS89_03125 PF13580 SIS domain MKS89_03130 PF03702 Anhydro-N-acetylmuramic acid kinase MKS89_03135 PF00933 Glycosyl hydrolase family 3 N terminal domain MKS89_03140 PF04397 LytTr DNA-binding domain MKS89_03140 PF00072 Response regulator receiver domain MKS89_03145 PF07694 5TMR of 5TMR-LYT MKS89_03145 PF06580 Histidine kinase MKS89_03150 PF00793 DAHP synthetase I family MKS89_03155 PF01817 Chorismate mutase type II MKS89_03155 PF02153 Prephenate dehydrogenase MKS89_03160 PF07238 PilZ domain MKS89_03165 PF00005 ABC transporter MKS89_03165 PF12848 ABC transporter MKS89_03170 PF01464 Transglycosylase SLT domain MKS89_03170 PF14718 Soluble lytic murein transglycosylase L domain MKS89_03175 PF01371 Trp repressor protein MKS89_03180 PF00206 Lyase MKS89_03180 PF10415 Fumarase C C-terminus MKS89_03185 PF04962 KduI/IolB family MKS89_03190 PF01931 Protein of unknown function DUF84 MKS89_03200 PF13416 Bacterial extracellular solute-binding protein MKS89_03205 PF01817 Chorismate mutase type II MKS89_03205 PF00800 Prephenate dehydratase MKS89_03210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MKS89_03215 PF13525 Outer membrane lipoprotein MKS89_03220 PF00849 RNA pseudouridylate synthase MKS89_03220 PF01479 S4 domain MKS89_03225 PF02578 Multi-copper polyphenol oxidoreductase laccase MKS89_03230 PF17871 AAA lid domain MKS89_03230 PF02861 Clp amino terminal domain, pathogenicity island component MKS89_03230 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_03230 PF10431 C-terminal, D2-small domain, of ClpB protein MKS89_03230 PF07724 AAA domain (Cdc48 subfamily) MKS89_03295 PF00881 Nitroreductase family MKS89_03300 PF12838 4Fe-4S dicluster domain MKS89_03305 PF16325 Peptidase family U32 C-terminal domain MKS89_03305 PF01136 Peptidase family U32 MKS89_03310 PF04381 Putative exonuclease, RdgC MKS89_03315 PF00072 Response regulator receiver domain MKS89_03315 PF00486 Transcriptional regulatory protein, C terminal MKS89_03320 PF00512 His Kinase A (phospho-acceptor) domain MKS89_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_03320 PF11808 Phosphate regulon sensor protein PhoR MKS89_03320 PF00989 PAS fold MKS89_03325 PF12849 PBP superfamily domain MKS89_03330 PF02541 Ppx/GppA phosphatase family MKS89_03335 PF13089 Polyphosphate kinase N-terminal domain MKS89_03335 PF17941 Polyphosphate kinase C-terminal domain 1 MKS89_03335 PF13090 Polyphosphate kinase C-terminal domain 2 MKS89_03335 PF02503 Polyphosphate kinase middle domain MKS89_03340 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_03345 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_03350 PF00005 ABC transporter MKS89_03355 PF01895 PhoU domain MKS89_03360 PF00578 AhpC/TSA family MKS89_03360 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKS89_03365 PF03466 LysR substrate binding domain MKS89_03365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_03370 PF01274 Malate synthase MKS89_03375 PF00463 Isocitrate lyase family MKS89_03380 PF00478 IMP dehydrogenase / GMP reductase domain MKS89_03380 PF00571 CBS domain MKS89_03385 PF02547 Queuosine biosynthesis protein MKS89_03390 PF01702 Queuine tRNA-ribosyltransferase MKS89_03395 PF02699 Preprotein translocase subunit MKS89_03400 PF07549 SecD/SecF GG Motif MKS89_03400 PF13721 SecD export protein N-terminal TM region MKS89_03400 PF02355 Protein export membrane protein MKS89_03405 PF07549 SecD/SecF GG Motif MKS89_03405 PF02355 Protein export membrane protein MKS89_03410 PF00459 Inositol monophosphatase family MKS89_03415 PF00588 SpoU rRNA Methylase family MKS89_03420 PF02082 Transcriptional regulator MKS89_03425 PF00266 Aminotransferase class-V MKS89_03430 PF01592 NifU-like N terminal domain MKS89_03435 PF01521 Iron-sulphur cluster biosynthesis MKS89_03440 PF00226 DnaJ domain MKS89_03440 PF07743 HSCB C-terminal oligomerisation domain MKS89_03445 PF00012 Hsp70 protein MKS89_03450 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_03455 PF04384 Iron-sulphur cluster assembly MKS89_03460 PF00883 Cytosol aminopeptidase family, catalytic domain MKS89_03460 PF12404 Peptidase MKS89_03465 PF00334 Nucleoside diphosphate kinase MKS89_03470 PF04055 Radical SAM superfamily MKS89_03475 PF13464 Domain of unknown function (DUF4115) MKS89_03480 PF04551 GcpE protein MKS89_03485 PF03129 Anticodon binding domain MKS89_03485 PF13393 Histidyl-tRNA synthetase MKS89_03490 PF09976 Tetratricopeptide repeat-like domain MKS89_03495 PF13360 PQQ-like domain MKS89_03500 PF01926 50S ribosome-binding GTPase MKS89_03500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MKS89_03510 PF02601 Exonuclease VII, large subunit MKS89_03510 PF13742 OB-fold nucleic acid binding domain MKS89_03515 PF00571 CBS domain MKS89_03515 PF00478 IMP dehydrogenase / GMP reductase domain MKS89_03520 PF00117 Glutamine amidotransferase class-I MKS89_03520 PF00958 GMP synthase C terminal domain MKS89_03520 PF02540 NAD synthase MKS89_03535 PF09225 Restriction endonuclease PvuII MKS89_03555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MKS89_03555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKS89_03555 PF02805 Metal binding domain of Ada MKS89_03555 PF12833 Helix-turn-helix domain MKS89_03565 PF01757 Acyltransferase family MKS89_03595 PF01797 Transposase IS200 like MKS89_03600 PF01810 LysE type translocator MKS89_03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_03605 PF03466 LysR substrate binding domain MKS89_03610 PF00455 DeoR C terminal sensor domain MKS89_03610 PF08220 DeoR-like helix-turn-helix domain MKS89_03615 PF01791 DeoC/LacD family aldolase MKS89_03620 PF00294 pfkB family carbohydrate kinase MKS89_03625 PF07690 Major Facilitator Superfamily MKS89_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_03650 PF03466 LysR substrate binding domain MKS89_03655 PF00376 MerR family regulatory protein MKS89_03655 PF09278 MerR, DNA binding MKS89_03660 PF00583 Acetyltransferase (GNAT) family MKS89_03665 PF02321 Outer membrane efflux protein MKS89_03670 PF00873 AcrB/AcrD/AcrF family MKS89_03675 PF00529 HlyD membrane-fusion protein of T1SS MKS89_03675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_03680 PF00486 Transcriptional regulatory protein, C terminal MKS89_03680 PF00072 Response regulator receiver domain MKS89_03685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_03685 PF00512 His Kinase A (phospho-acceptor) domain MKS89_03685 PF00989 PAS fold MKS89_03685 PF16736 Single Cache-like MKS89_03690 PF01235 Sodium:alanine symporter family MKS89_03695 PF01966 HD domain MKS89_03695 PF13286 Phosphohydrolase-associated domain MKS89_03705 PF01261 Xylose isomerase-like TIM barrel MKS89_03710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MKS89_03720 PF00596 Class II Aldolase and Adducin N-terminal domain MKS89_03725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_03730 PF03611 PTS system sugar-specific permease component MKS89_03735 PF00455 DeoR C terminal sensor domain MKS89_03735 PF08220 DeoR-like helix-turn-helix domain MKS89_03750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_03760 PF12833 Helix-turn-helix domain MKS89_03770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_03770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_03770 PF02378 Phosphotransferase system, EIIC MKS89_03785 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MKS89_03835 PF02540 NAD synthase MKS89_03845 PF00266 Aminotransferase class-V MKS89_03870 PF00171 Aldehyde dehydrogenase family MKS89_03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_03875 PF03466 LysR substrate binding domain MKS89_03890 PF16861 Carbamoyltransferase C-terminus MKS89_03890 PF02543 Carbamoyltransferase N-terminus MKS89_03895 PF03062 MBOAT, membrane-bound O-acyltransferase family MKS89_03910 PF04304 Protein of unknown function (DUF454) MKS89_03920 PF08447 PAS fold MKS89_03920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_03925 PF00874 PRD domain MKS89_03925 PF03123 CAT RNA binding domain MKS89_03930 PF00367 phosphotransferase system, EIIB MKS89_03930 PF02378 Phosphotransferase system, EIIC MKS89_03930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_03935 PF13186 Iron-sulfur cluster-binding domain MKS89_03935 PF04055 Radical SAM superfamily MKS89_03945 PF00884 Sulfatase MKS89_03955 PF12833 Helix-turn-helix domain MKS89_03955 PF10114 Sensory domain found in PocR MKS89_03965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_03975 PF01116 Fructose-bisphosphate aldolase class-II MKS89_03990 PF00365 Phosphofructokinase MKS89_04015 PF00890 FAD binding domain MKS89_04015 PF04205 FMN-binding domain MKS89_04015 PF03358 NADPH-dependent FMN reductase MKS89_04020 PF00890 FAD binding domain MKS89_04020 PF04205 FMN-binding domain MKS89_04020 PF03358 NADPH-dependent FMN reductase MKS89_04025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_04025 PF03466 LysR substrate binding domain MKS89_04030 PF02424 ApbE family MKS89_04035 PF00149 Calcineurin-like phosphoesterase MKS89_04045 PF07690 Major Facilitator Superfamily MKS89_04095 PF00300 Histidine phosphatase superfamily (branch 1) MKS89_04120 PF01668 SmpB protein MKS89_04125 PF03364 Polyketide cyclase / dehydrase and lipid transport MKS89_04130 PF03658 RnfH family Ubiquitin MKS89_04135 PF04355 SmpA / OmlA family MKS89_04145 PF02463 RecF/RecN/SMC N terminal domain MKS89_04150 PF01513 ATP-NAD kinase MKS89_04155 PF01025 GrpE MKS89_04165 PF16868 NMT1-like family MKS89_04170 PF00012 Hsp70 protein MKS89_04175 PF00684 DnaJ central domain MKS89_04175 PF00226 DnaJ domain MKS89_04175 PF01556 DnaJ C terminal domain MKS89_04200 PF00756 Putative esterase MKS89_04205 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_04205 PF00107 Zinc-binding dehydrogenase MKS89_04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_04210 PF03466 LysR substrate binding domain MKS89_04215 PF14437 MafB19-like deaminase MKS89_04220 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_04220 PF01464 Transglycosylase SLT domain MKS89_04225 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal MKS89_04225 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MKS89_04225 PF02769 AIR synthase related protein, C-terminal domain MKS89_04230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKS89_04230 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKS89_04240 PF00141 Peroxidase MKS89_04245 PF00672 HAMP domain MKS89_04245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_04260 PF06786 Uncharacterised protein family (UPF0253) MKS89_04265 PF03129 Anticodon binding domain MKS89_04265 PF04073 Aminoacyl-tRNA editing domain MKS89_04265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKS89_04270 PF18389 TrmO C-terminal domain MKS89_04270 PF01980 tRNA-methyltransferase O MKS89_04275 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MKS89_04300 PF04287 tRNA pseudouridine synthase C MKS89_04305 PF00849 RNA pseudouridylate synthase MKS89_04310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase MKS89_04310 PF02779 Transketolase, pyrimidine binding domain MKS89_04310 PF02780 Transketolase, C-terminal domain MKS89_04315 PF00348 Polyprenyl synthetase MKS89_04320 PF02609 Exonuclease VII small subunit MKS89_04325 PF01618 MotA/TolQ/ExbB proton channel family MKS89_04330 PF13677 Membrane MotB of proton-channel complex MotA/MotB MKS89_04330 PF00691 OmpA family MKS89_04335 PF00248 Aldo/keto reductase family MKS89_04340 PF02568 Thiamine biosynthesis protein (ThiI) MKS89_04340 PF02926 THUMP domain MKS89_04345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_04345 PF03466 LysR substrate binding domain MKS89_04360 PF01728 FtsJ-like methyltransferase MKS89_04360 PF18125 RlmM ferredoxin-like domain MKS89_04365 PF01367 5'-3' exonuclease, C-terminal SAM fold MKS89_04365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MKS89_04370 PF11892 Domain of unknown function (DUF3412) MKS89_04370 PF03641 Possible lysine decarboxylase MKS89_04370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases MKS89_04385 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MKS89_04385 PF14489 QueF-like protein MKS89_04390 PF07348 Syd protein (SUKH-2) MKS89_04395 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) MKS89_04400 PF03180 NLPA lipoprotein MKS89_04405 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_04410 PF00005 ABC transporter MKS89_04410 PF09383 NIL domain MKS89_04420 PF00356 Bacterial regulatory proteins, lacI family MKS89_04425 PF02378 Phosphotransferase system, EIIC MKS89_04425 PF00367 phosphotransferase system, EIIB MKS89_04430 PF16657 Maltogenic Amylase, C-terminal domain MKS89_04430 PF00128 Alpha amylase, catalytic domain MKS89_04445 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MKS89_04445 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MKS89_04450 PF00464 Serine hydroxymethyltransferase MKS89_04460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MKS89_04460 PF04055 Radical SAM superfamily MKS89_04465 PF03099 Biotin/lipoate A/B protein ligase family MKS89_04470 PF04359 Protein of unknown function (DUF493) MKS89_04475 PF00072 Response regulator receiver domain MKS89_04475 PF01627 Hpt domain MKS89_04475 PF00512 His Kinase A (phospho-acceptor) domain MKS89_04475 PF00672 HAMP domain MKS89_04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_04475 PF17149 Periplasmic sensor domain found in signal transduction proteins MKS89_04480 PF00768 D-alanyl-D-alanine carboxypeptidase MKS89_04480 PF07943 Penicillin-binding protein 5, C-terminal domain MKS89_04485 PF05036 Sporulation related domain MKS89_04485 PF03330 Lytic transglycolase MKS89_04490 PF01098 Cell cycle protein MKS89_04495 PF03717 Penicillin-binding Protein dimerisation domain MKS89_04495 PF00905 Penicillin binding protein transpeptidase domain MKS89_04500 PF02590 Predicted SPOUT methyltransferase MKS89_04510 PF06144 DNA polymerase III, delta subunit MKS89_04510 PF14840 Processivity clamp loader gamma complex DNA pol III C-term MKS89_04515 PF04390 Lipopolysaccharide-assembly MKS89_04520 PF08264 Anticodon-binding domain of tRNA MKS89_04520 PF00133 tRNA synthetases class I (I, L, M and V) MKS89_04520 PF13603 Leucyl-tRNA synthetase, Domain 2 MKS89_04530 PF00795 Carbon-nitrogen hydrolase MKS89_04535 PF03471 Transporter associated domain MKS89_04535 PF00571 CBS domain MKS89_04540 PF02130 Uncharacterized protein family UPF0054 MKS89_04545 PF02562 PhoH-like protein MKS89_04550 PF04055 Radical SAM superfamily MKS89_04550 PF01938 TRAM domain MKS89_04550 PF00919 Uncharacterized protein family UPF0004 MKS89_04555 PF01494 FAD binding domain MKS89_04560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_04565 PF05524 PEP-utilising enzyme, N-terminal MKS89_04565 PF00391 PEP-utilising enzyme, mobile domain MKS89_04565 PF02896 PEP-utilising enzyme, TIM barrel domain MKS89_04570 PF00381 PTS HPr component phosphorylation site MKS89_04575 PF00291 Pyridoxal-phosphate dependent enzyme MKS89_04585 PF04354 ZipA, C-terminal FtsZ-binding domain MKS89_04590 PF00533 BRCA1 C Terminus (BRCT) domain MKS89_04590 PF03120 NAD-dependent DNA ligase OB-fold domain MKS89_04590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MKS89_04590 PF12826 Helix-hairpin-helix motif MKS89_04590 PF01653 NAD-dependent DNA ligase adenylation domain MKS89_04595 PF13411 MerR HTH family regulatory protein MKS89_04600 PF00085 Thioredoxin MKS89_04605 PF00106 short chain dehydrogenase MKS89_04610 PF08338 Domain of unknown function (DUF1731) MKS89_04610 PF01370 NAD dependent epimerase/dehydratase family MKS89_04615 PF07556 Protein of unknown function (DUF1538) MKS89_04620 PF07556 Protein of unknown function (DUF1538) MKS89_04640 PF17323 Trans-membrane regulatory protein ToxS MKS89_04645 PF00486 Transcriptional regulatory protein, C terminal MKS89_04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_04650 PF00183 Hsp90 protein MKS89_04655 PF05191 Adenylate kinase, active site lid MKS89_04660 PF00762 Ferrochelatase MKS89_04665 PF02357 Transcription termination factor nusG MKS89_04670 PF13537 Glutamine amidotransferase domain MKS89_04670 PF00733 Asparagine synthase MKS89_04675 PF00480 ROK family MKS89_04675 PF01047 MarR family MKS89_04680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MKS89_04680 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKS89_04690 PF01416 tRNA pseudouridine synthase MKS89_04695 PF01039 Carboxyl transferase domain MKS89_04695 PF17848 Acetyl-coA carboxylase zinc finger domain MKS89_04700 PF02875 Mur ligase family, glutamate ligase domain MKS89_04700 PF08245 Mur ligase middle domain MKS89_04705 PF05036 Sporulation related domain MKS89_04710 PF02674 Colicin V production protein MKS89_04715 PF00156 Phosphoribosyl transferase domain MKS89_04720 PF13726 Na+-H+ antiporter family MKS89_04720 PF03553 Na+/H+ antiporter family MKS89_04725 PF00929 Exonuclease MKS89_04730 PF00691 OmpA family MKS89_04730 PF18393 MotY N-terminal domain MKS89_04735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKS89_04740 PF00392 Bacterial regulatory proteins, gntR family MKS89_04740 PF07729 FCD domain MKS89_04745 PF00633 Helix-hairpin-helix motif MKS89_04745 PF10576 Iron-sulfur binding domain of endonuclease III MKS89_04745 PF00730 HhH-GPD superfamily base excision DNA repair protein MKS89_04750 PF02508 Rnf-Nqr subunit, membrane protein MKS89_04755 PF04205 FMN-binding domain MKS89_04760 PF03116 NQR2, RnfD, RnfE family MKS89_04765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit MKS89_04765 PF12838 4Fe-4S dicluster domain MKS89_04765 PF13375 RnfC Barrel sandwich hybrid domain MKS89_04765 PF10531 SLBB domain MKS89_04770 PF04060 Putative Fe-S cluster MKS89_04775 PF02508 Rnf-Nqr subunit, membrane protein MKS89_04785 PF00205 Thiamine pyrophosphate enzyme, central domain MKS89_04785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKS89_04785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKS89_04790 PF03306 Alpha-acetolactate decarboxylase MKS89_04795 PF03466 LysR substrate binding domain MKS89_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_04800 PF00857 Isochorismatase family MKS89_04805 PF01276 Orn/Lys/Arg decarboxylase, major domain MKS89_04805 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MKS89_04810 PF00892 EamA-like transporter family MKS89_04830 PF00271 Helicase conserved C-terminal domain MKS89_04830 PF04851 Type III restriction enzyme, res subunit MKS89_04830 PF02151 UvrB/uvrC motif MKS89_04830 PF12344 Ultra-violet resistance protein B MKS89_04830 PF17757 UvrB interaction domain MKS89_04835 PF00158 Sigma-54 interaction domain MKS89_04835 PF02954 Bacterial regulatory protein, Fis family MKS89_04835 PF00072 Response regulator receiver domain MKS89_04840 PF01627 Hpt domain MKS89_04845 PF01933 Uncharacterised protein family UPF0052 MKS89_04850 PF04055 Radical SAM superfamily MKS89_04850 PF06463 Molybdenum Cofactor Synthesis C MKS89_04855 PF00994 Probable molybdopterin binding domain MKS89_04860 PF01967 MoaC family MKS89_04865 PF02597 ThiS family MKS89_04870 PF02391 MoaE protein MKS89_04880 PF01048 Phosphorylase superfamily MKS89_04890 PF09334 tRNA synthetases class I (M) MKS89_04890 PF01588 Putative tRNA binding domain MKS89_04895 PF10609 NUBPL iron-transfer P-loop NTPase MKS89_04900 PF00485 Phosphoribulokinase / Uridine kinase family MKS89_04910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP MKS89_04915 PF01451 Low molecular weight phosphotyrosine protein phosphatase MKS89_04920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) MKS89_04925 PF02803 Thiolase, C-terminal domain MKS89_04925 PF00108 Thiolase, N-terminal domain MKS89_04930 PF00378 Enoyl-CoA hydratase/isomerase MKS89_04930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MKS89_04930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MKS89_04935 PF00881 Nitroreductase family MKS89_04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_04940 PF03466 LysR substrate binding domain MKS89_04945 PF00072 Response regulator receiver domain MKS89_04950 PF00156 Phosphoribosyl transferase domain MKS89_04955 PF12169 DNA polymerase III subunits gamma and tau domain III MKS89_04955 PF12170 DNA polymerase III tau subunit V interacting with alpha MKS89_04955 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding MKS89_04960 PF02575 YbaB/EbfC DNA-binding family MKS89_04965 PF02132 RecR protein MKS89_04965 PF13662 Toprim domain MKS89_04970 PF03692 Putative zinc- or iron-chelating domain MKS89_04975 PF03692 Putative zinc- or iron-chelating domain MKS89_05040 PF07702 UTRA domain MKS89_05040 PF00392 Bacterial regulatory proteins, gntR family MKS89_05045 PF01797 Transposase IS200 like MKS89_05050 PF00221 Aromatic amino acid lyase MKS89_05055 PF01979 Amidohydrolase family MKS89_05065 PF01175 Urocanase Rossmann-like domain MKS89_05065 PF17392 Urocanase C-terminal domain MKS89_05065 PF17391 Urocanase N-terminal domain MKS89_05080 PF00672 HAMP domain MKS89_05080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_05100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_05105 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_05110 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_05115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_05115 PF00005 ABC transporter MKS89_05120 PF00155 Aminotransferase class I and II MKS89_05125 PF00425 chorismate binding enzyme MKS89_05130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKS89_05130 PF16582 Middle domain of thiamine pyrophosphate MKS89_05130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKS89_05135 PF12697 Alpha/beta hydrolase family MKS89_05140 PF00378 Enoyl-CoA hydratase/isomerase MKS89_05145 PF13378 Enolase C-terminal domain-like MKS89_05150 PF00501 AMP-binding enzyme MKS89_05150 PF13193 AMP-binding enzyme C-terminal domain MKS89_05160 PF03601 Conserved hypothetical protein 698 MKS89_05165 PF07690 Major Facilitator Superfamily MKS89_05180 PF00857 Isochorismatase family MKS89_05190 PF01037 Lrp/AsnC ligand binding domain MKS89_05190 PF13404 AsnC-type helix-turn-helix domain MKS89_05205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKS89_05225 PF01043 SecA preprotein cross-linking domain MKS89_05225 PF07517 SecA DEAD-like domain MKS89_05225 PF02810 SEC-C motif MKS89_05225 PF07516 SecA Wing and Scaffold domain MKS89_05245 PF00459 Inositol monophosphatase family MKS89_05250 PF00356 Bacterial regulatory proteins, lacI family MKS89_05260 PF00005 ABC transporter MKS89_05260 PF08402 TOBE domain MKS89_05275 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_05290 PF11398 Protein of unknown function (DUF2813) MKS89_05295 PF00580 UvrD/REP helicase N-terminal domain MKS89_05295 PF13361 UvrD-like helicase C-terminal domain MKS89_05300 PF17912 MalK OB fold domain MKS89_05300 PF03459 TOBE domain MKS89_05300 PF00005 ABC transporter MKS89_05320 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_05325 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_05330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_05330 PF03466 LysR substrate binding domain MKS89_05335 PF00893 Small Multidrug Resistance protein MKS89_05340 PF00270 DEAD/DEAH box helicase MKS89_05340 PF00271 Helicase conserved C-terminal domain MKS89_05345 PF09905 DNA-binding protein VF530 MKS89_05355 PF01738 Dienelactone hydrolase family MKS89_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_05360 PF03466 LysR substrate binding domain MKS89_05365 PF00698 Acyl transferase domain MKS89_05370 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG MKS89_05385 PF01039 Carboxyl transferase domain MKS89_05390 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase MKS89_05395 PF16957 Malonate decarboxylase, alpha subunit, transporter MKS89_05400 PF00933 Glycosyl hydrolase family 3 N terminal domain MKS89_05415 PF02311 AraC-like ligand binding domain MKS89_05415 PF12833 Helix-turn-helix domain MKS89_05420 PF00795 Carbon-nitrogen hydrolase MKS89_05430 PF02322 Cytochrome bd terminal oxidase subunit II MKS89_05435 PF01654 Cytochrome bd terminal oxidase subunit I MKS89_05440 PF00392 Bacterial regulatory proteins, gntR family MKS89_05440 PF00155 Aminotransferase class I and II MKS89_05445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKS89_05445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKS89_05450 PF00553 Cellulose binding domain MKS89_05450 PF00041 Fibronectin type III domain MKS89_05450 PF01341 Glycosyl hydrolases family 6 MKS89_05465 PF12833 Helix-turn-helix domain MKS89_05465 PF01497 Periplasmic binding protein MKS89_05475 PF13847 Methyltransferase domain MKS89_05480 PF12697 Alpha/beta hydrolase family MKS89_05495 PF00196 Bacterial regulatory proteins, luxR family MKS89_05500 PF00579 tRNA synthetases class I (W and Y) MKS89_05505 PF00512 His Kinase A (phospho-acceptor) domain MKS89_05505 PF00989 PAS fold MKS89_05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_05505 PF13188 PAS domain MKS89_05505 PF13426 PAS domain MKS89_05535 PF00474 Sodium:solute symporter family MKS89_05545 PF00455 DeoR C terminal sensor domain MKS89_05545 PF08220 DeoR-like helix-turn-helix domain MKS89_05550 PF00923 Transaldolase/Fructose-6-phosphate aldolase MKS89_05555 PF04055 Radical SAM superfamily MKS89_05560 PF01228 Glycine radical MKS89_05560 PF02901 Pyruvate formate lyase-like MKS89_05565 PF13407 Periplasmic binding protein domain MKS89_05570 PF00512 His Kinase A (phospho-acceptor) domain MKS89_05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_05570 PF00672 HAMP domain MKS89_05570 PF17149 Periplasmic sensor domain found in signal transduction proteins MKS89_05570 PF01627 Hpt domain MKS89_05570 PF00072 Response regulator receiver domain MKS89_05575 PF00563 EAL domain MKS89_05575 PF00990 Diguanylate cyclase, GGDEF domain MKS89_05575 PF03707 Bacterial signalling protein N terminal repeat MKS89_05580 PF00672 HAMP domain MKS89_05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_05580 PF12729 Four helix bundle sensory module for signal transduction MKS89_05590 PF13847 Methyltransferase domain MKS89_05595 PF01263 Aldose 1-epimerase MKS89_05600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKS89_05600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKS89_05605 PF01641 SelR domain MKS89_05615 PF07023 Protein of unknown function (DUF1315) MKS89_05620 PF00710 Asparaginase, N-terminal MKS89_05620 PF17763 Glutaminase/Asparaginase C-terminal domain MKS89_05625 PF01343 Peptidase family S49 MKS89_05630 PF01842 ACT domain MKS89_05630 PF00551 Formyl transferase MKS89_05640 PF13307 Helicase C-terminal domain MKS89_05640 PF04851 Type III restriction enzyme, res subunit MKS89_05645 PF00814 Glycoprotease family MKS89_05660 PF00561 alpha/beta hydrolase fold MKS89_05665 PF00501 AMP-binding enzyme MKS89_05665 PF13193 AMP-binding enzyme C-terminal domain MKS89_05670 PF01612 3'-5' exonuclease MKS89_05670 PF00570 HRDC domain MKS89_05675 PF03776 Septum formation topological specificity factor MinE MKS89_05680 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MKS89_05685 PF03775 Septum formation inhibitor MinC, C-terminal domain MKS89_05685 PF05209 Septum formation inhibitor MinC, N-terminal domain MKS89_05690 PF05166 YcgL domain MKS89_05695 PF13406 Transglycosylase SLT domain MKS89_05700 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MKS89_05700 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MKS89_05715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKS89_05735 PF12833 Helix-turn-helix domain MKS89_05740 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKS89_05740 PF00578 AhpC/TSA family MKS89_05745 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain MKS89_05745 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain MKS89_05745 PF11974 Bacterial alpha-2-macroglobulin MG3 domain MKS89_05745 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain MKS89_05745 PF17962 Bacterial macroglobulin domain 6 MKS89_05745 PF01835 MG2 domain MKS89_05745 PF07678 A-macroglobulin TED domain MKS89_05745 PF00207 Alpha-2-macroglobulin family MKS89_05745 PF07703 Alpha-2-macroglobulin bait region domain MKS89_05750 PF00905 Penicillin binding protein transpeptidase domain MKS89_05750 PF00912 Transglycosylase MKS89_05750 PF06832 Penicillin-Binding Protein C-terminus Family MKS89_05755 PF09905 DNA-binding protein VF530 MKS89_05760 PF01810 LysE type translocator MKS89_05765 PF07883 Cupin domain MKS89_05790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_05790 PF12729 Four helix bundle sensory module for signal transduction MKS89_05790 PF00672 HAMP domain MKS89_05800 PF12833 Helix-turn-helix domain MKS89_05800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKS89_05800 PF02805 Metal binding domain of Ada MKS89_05800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MKS89_05820 PF07478 D-ala D-ala ligase C-terminus MKS89_05820 PF01820 D-ala D-ala ligase N-terminus MKS89_05825 PF02899 Phage integrase, N-terminal SAM-like domain MKS89_05825 PF00589 Phage integrase family MKS89_05830 PF00480 ROK family MKS89_05830 PF01047 MarR family MKS89_05835 PF01979 Amidohydrolase family MKS89_05840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MKS89_05845 PF02378 Phosphotransferase system, EIIC MKS89_05845 PF00367 phosphotransferase system, EIIB MKS89_05845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_05850 PF02696 Uncharacterized ACR, YdiU/UPF0061 family MKS89_05855 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_05860 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MKS89_05865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_05875 PF00574 Clp protease MKS89_05880 PF02954 Bacterial regulatory protein, Fis family MKS89_05880 PF00072 Response regulator receiver domain MKS89_05880 PF00158 Sigma-54 interaction domain MKS89_05885 PF02743 Cache domain MKS89_05885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_05885 PF00512 His Kinase A (phospho-acceptor) domain MKS89_05890 PF05697 Bacterial trigger factor protein (TF) MKS89_05890 PF05698 Bacterial trigger factor protein (TF) C-terminus MKS89_05890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKS89_05895 PF00574 Clp protease MKS89_05900 PF06689 ClpX C4-type zinc finger MKS89_05900 PF07724 AAA domain (Cdc48 subfamily) MKS89_05900 PF10431 C-terminal, D2-small domain, of ClpB protein MKS89_05905 PF05362 Lon protease (S16) C-terminal proteolytic domain MKS89_05905 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_05905 PF02190 ATP-dependent protease La (LON) substrate-binding domain MKS89_05910 PF00216 Bacterial DNA-binding protein MKS89_05915 PF13145 PPIC-type PPIASE domain MKS89_05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_05925 PF00072 Response regulator receiver domain MKS89_05930 PF17327 Acyl homoserine lactone synthase MKS89_05935 PF02224 Cytidylate kinase MKS89_05940 PF00575 S1 RNA binding domain MKS89_05945 PF00216 Bacterial DNA-binding protein MKS89_05950 PF06305 Lipopolysaccharide assembly protein A domain MKS89_05955 PF18073 Rubredoxin metal binding domain MKS89_05960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MKS89_05965 PF13006 Insertion element 4 transposase N-terminal MKS89_05965 PF01609 Transposase DDE domain MKS89_05970 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) MKS89_05980 PF03466 LysR substrate binding domain MKS89_05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_05990 PF01037 Lrp/AsnC ligand binding domain MKS89_05995 PF01580 FtsK/SpoIIIE family MKS89_05995 PF09397 Ftsk gamma domain MKS89_05995 PF17854 FtsK alpha domain MKS89_05995 PF13491 4TM region of DNA translocase FtsK/SpoIIIE MKS89_06000 PF02600 Disulfide bond formation protein DsbB MKS89_06005 PF06450 Bacterial Na+/H+ antiporter B (NhaB) MKS89_06010 PF07840 FadR C-terminal domain MKS89_06010 PF00392 Bacterial regulatory proteins, gntR family MKS89_06020 PF01230 HIT domain MKS89_06035 PF08139 Prokaryotic membrane lipoprotein lipid attachment site MKS89_06035 PF13036 Peptidoglycan-synthase activator LpoB MKS89_06045 PF05728 Uncharacterised protein family (UPF0227) MKS89_06050 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_06055 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_06060 PF12911 N-terminal TM domain of oligopeptide transport permease C MKS89_06060 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_06065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_06065 PF00005 ABC transporter MKS89_06080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_06090 PF00072 Response regulator receiver domain MKS89_06090 PF00196 Bacterial regulatory proteins, luxR family MKS89_06100 PF03461 TRCF domain MKS89_06100 PF00271 Helicase conserved C-terminal domain MKS89_06100 PF00270 DEAD/DEAH box helicase MKS89_06100 PF02559 CarD-like/TRCF domain MKS89_06100 PF17757 UvrB interaction domain MKS89_06110 PF12704 MacB-like periplasmic core domain MKS89_06110 PF02687 FtsX-like permease family MKS89_06115 PF00005 ABC transporter MKS89_06120 PF02687 FtsX-like permease family MKS89_06120 PF12704 MacB-like periplasmic core domain MKS89_06130 PF03772 Competence protein MKS89_06130 PF13567 Domain of unknown function (DUF4131) MKS89_06130 PF00753 Metallo-beta-lactamase superfamily MKS89_06135 PF00664 ABC transporter transmembrane region MKS89_06135 PF00005 ABC transporter MKS89_06140 PF02606 Tetraacyldisaccharide-1-P 4'-kinase MKS89_06145 PF03966 Trm112p-like protein MKS89_06150 PF02348 Cytidylyltransferase MKS89_06155 PF04293 SpoVR like protein MKS89_06160 PF04285 Protein of unknown function (DUF444) MKS89_06165 PF06798 PrkA serine protein kinase C-terminal domain MKS89_06165 PF08298 PrkA AAA domain MKS89_06170 PF03887 YfbU domain MKS89_06175 PF04055 Radical SAM superfamily MKS89_06180 PF00672 HAMP domain MKS89_06180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_06190 PF02901 Pyruvate formate lyase-like MKS89_06190 PF01228 Glycine radical MKS89_06195 PF03372 Endonuclease/Exonuclease/phosphatase family MKS89_06200 PF10689 Protein of unknown function (DUF2496) MKS89_06205 PF07445 Primosomal replication protein priC MKS89_06210 PF01925 Sulfite exporter TauE/SafE MKS89_06215 PF13307 Helicase C-terminal domain MKS89_06215 PF06733 DEAD_2 MKS89_06220 PF13609 Gram-negative porin MKS89_06225 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MKS89_06230 PF02810 SEC-C motif MKS89_06235 PF00149 Calcineurin-like phosphoesterase MKS89_06240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MKS89_06245 PF09190 DALR domain MKS89_06245 PF01406 tRNA synthetases class I (C) catalytic domain MKS89_06250 PF02075 Crossover junction endodeoxyribonuclease RuvC MKS89_06255 PF07499 RuvA, C-terminal domain MKS89_06255 PF01330 RuvA N terminal domain MKS89_06260 PF17864 RuvB AAA lid domain MKS89_06260 PF05496 Holliday junction DNA helicase RuvB P-loop domain MKS89_06260 PF05491 RuvB C-terminal winged helix domain MKS89_06265 PF01654 Cytochrome bd terminal oxidase subunit I MKS89_06270 PF02322 Cytochrome bd terminal oxidase subunit II MKS89_06275 PF08173 Membrane bound YbgT-like protein MKS89_06280 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) MKS89_06290 PF01618 MotA/TolQ/ExbB proton channel family MKS89_06295 PF02472 Biopolymer transport protein ExbD/TolR MKS89_06305 PF07676 WD40-like Beta Propeller Repeat MKS89_06305 PF04052 TolB amino-terminal domain MKS89_06310 PF00691 OmpA family MKS89_06315 PF16331 TolA binding protein trimerisation MKS89_06315 PF13174 Tetratricopeptide repeat MKS89_06320 PF02445 Quinolinate synthetase A protein MKS89_06330 PF06610 L-alanine exporter MKS89_06375 PF05860 haemagglutination activity domain MKS89_06395 PF00156 Phosphoribosyl transferase domain MKS89_06400 PF03466 LysR substrate binding domain MKS89_06400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_06405 PF00107 Zinc-binding dehydrogenase MKS89_06405 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_06410 PF00890 FAD binding domain MKS89_06410 PF04205 FMN-binding domain MKS89_06410 PF03358 NADPH-dependent FMN reductase MKS89_06415 PF02424 ApbE family MKS89_06425 PF07690 Major Facilitator Superfamily MKS89_06430 PF17203 Single cache domain 3 MKS89_06430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_06435 PF00939 Sodium:sulfate symporter transmembrane region MKS89_06440 PF12431 Transcriptional regulator MKS89_06440 PF00072 Response regulator receiver domain MKS89_06445 PF04303 PrpF protein MKS89_06450 PF00330 Aconitase family (aconitate hydratase) MKS89_06450 PF11791 Aconitate B N-terminal domain MKS89_06450 PF06434 Aconitate hydratase 2 N-terminus MKS89_06455 PF06964 Alpha-L-arabinofuranosidase C-terminal domain MKS89_06460 PF07715 TonB-dependent Receptor Plug Domain MKS89_06465 PF11806 Domain of unknown function (DUF3327) MKS89_06465 PF00756 Putative esterase MKS89_06475 PF00501 AMP-binding enzyme MKS89_06475 PF00668 Condensation domain MKS89_06475 PF00550 Phosphopantetheine attachment site MKS89_06475 PF13193 AMP-binding enzyme C-terminal domain MKS89_06480 PF00005 ABC transporter MKS89_06485 PF01032 FecCD transport family MKS89_06490 PF01032 FecCD transport family MKS89_06495 PF05977 Transmembrane secretion effector MKS89_06500 PF01497 Periplasmic binding protein MKS89_06505 PF00857 Isochorismatase family MKS89_06505 PF00550 Phosphopantetheine attachment site MKS89_06510 PF01797 Transposase IS200 like MKS89_06515 PF13193 AMP-binding enzyme C-terminal domain MKS89_06515 PF00501 AMP-binding enzyme MKS89_06520 PF00425 chorismate binding enzyme MKS89_06545 PF00005 ABC transporter MKS89_06550 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_06555 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_06560 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_06565 PF00356 Bacterial regulatory proteins, lacI family MKS89_06570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_06575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_06580 PF03611 PTS system sugar-specific permease component MKS89_06585 PF00089 Trypsin MKS89_06595 PF02423 Ornithine cyclodeaminase/mu-crystallin family MKS89_06605 PF01266 FAD dependent oxidoreductase MKS89_06625 PF04717 Type VI secretion system, phage-baseplate injector MKS89_06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_06650 PF03466 LysR substrate binding domain MKS89_06655 PF02525 Flavodoxin-like fold MKS89_06660 PF00149 Calcineurin-like phosphoesterase MKS89_06665 PF00005 ABC transporter MKS89_06665 PF08402 TOBE domain MKS89_06685 PF00356 Bacterial regulatory proteins, lacI family MKS89_06695 PF04225 Opacity-associated protein A LysM-like domain MKS89_06695 PF01551 Peptidase family M23 MKS89_06705 PF02001 Protein of unknown function DUF134 MKS89_06715 PF00664 ABC transporter transmembrane region MKS89_06715 PF00005 ABC transporter MKS89_06720 PF00005 ABC transporter MKS89_06720 PF00664 ABC transporter transmembrane region MKS89_06725 PF02424 ApbE family MKS89_06730 PF02254 TrkA-N domain MKS89_06730 PF02080 TrkA-C domain MKS89_06735 PF02386 Cation transport protein MKS89_06745 PF07055 Enoyl reductase FAD binding domain MKS89_06745 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MKS89_06745 PF12241 Trans-2-enoyl-CoA reductase catalytic region MKS89_06750 PF06826 Predicted Permease Membrane Region MKS89_06750 PF02080 TrkA-C domain MKS89_06755 PF00462 Glutaredoxin MKS89_06760 PF01418 Helix-turn-helix domain, rpiR family MKS89_06760 PF01380 SIS domain MKS89_06765 PF00282 Pyridoxal-dependent decarboxylase conserved domain MKS89_06775 PF04994 TfoX C-terminal domain MKS89_06775 PF04993 TfoX N-terminal domain MKS89_06790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_06790 PF00512 His Kinase A (phospho-acceptor) domain MKS89_06800 PF00266 Aminotransferase class-V MKS89_06805 PF11842 Domain of unknown function (DUF3362) MKS89_06805 PF04055 Radical SAM superfamily MKS89_06805 PF08497 Radical SAM N-terminal MKS89_06820 PF01037 Lrp/AsnC ligand binding domain MKS89_06825 PF01053 Cys/Met metabolism PLP-dependent enzyme MKS89_06830 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_06835 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_06840 PF00005 ABC transporter MKS89_06845 PF03466 LysR substrate binding domain MKS89_06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_06850 PF08267 Cobalamin-independent synthase, N-terminal domain MKS89_06850 PF01717 Cobalamin-independent synthase, Catalytic domain MKS89_06860 PF03795 YCII-related domain MKS89_06865 PF03061 Thioesterase superfamily MKS89_06870 PF04279 Intracellular septation protein A MKS89_06875 PF00375 Sodium:dicarboxylate symporter family MKS89_06880 PF00290 Tryptophan synthase alpha chain MKS89_06885 PF00291 Pyridoxal-phosphate dependent enzyme MKS89_06890 PF00218 Indole-3-glycerol phosphate synthase MKS89_06890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MKS89_06895 PF02885 Glycosyl transferase family, helical bundle domain MKS89_06895 PF00591 Glycosyl transferase family, a/b domain MKS89_06900 PF00117 Glutamine amidotransferase class-I MKS89_06905 PF00425 chorismate binding enzyme MKS89_06905 PF04715 Anthranilate synthase component I, N terminal region MKS89_06910 PF02811 PHP domain MKS89_06915 PF01300 Telomere recombination MKS89_06920 PF01479 S4 domain MKS89_06920 PF00849 RNA pseudouridylate synthase MKS89_06925 PF00664 ABC transporter transmembrane region MKS89_06925 PF00005 ABC transporter MKS89_06930 PF00005 ABC transporter MKS89_06930 PF00664 ABC transporter transmembrane region MKS89_06935 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_06945 PF02698 DUF218 domain MKS89_06955 PF00390 Malic enzyme, N-terminal domain MKS89_06955 PF03949 Malic enzyme, NAD binding domain MKS89_06965 PF01259 SAICAR synthetase MKS89_06980 PF00691 OmpA family MKS89_06995 PF02913 FAD linked oxidases, C-terminal domain MKS89_06995 PF01565 FAD binding domain MKS89_06995 PF13183 4Fe-4S dicluster domain MKS89_07000 PF04191 Phospholipid methyltransferase MKS89_07010 PF04269 Protein of unknown function, DUF440 MKS89_07015 PF09285 Elongation factor P, C-terminal MKS89_07015 PF01132 Elongation factor P (EF-P) OB domain MKS89_07015 PF08207 Elongation factor P (EF-P) KOW-like domain MKS89_07025 PF00136 DNA polymerase family B MKS89_07025 PF03104 DNA polymerase family B, exonuclease domain MKS89_07035 PF00072 Response regulator receiver domain MKS89_07035 PF00196 Bacterial regulatory proteins, luxR family MKS89_07040 PF01541 GIY-YIG catalytic domain MKS89_07040 PF02151 UvrB/uvrC motif MKS89_07040 PF08459 UvrC Helix-hairpin-helix N-terminal MKS89_07045 PF01066 CDP-alcohol phosphatidyltransferase MKS89_07050 PF03649 Uncharacterised protein family (UPF0014) MKS89_07060 PF00005 ABC transporter MKS89_07065 PF00005 ABC transporter MKS89_07065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_07070 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_07070 PF12911 N-terminal TM domain of oligopeptide transport permease C MKS89_07075 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_07080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_07085 PF02954 Bacterial regulatory protein, Fis family MKS89_07085 PF00158 Sigma-54 interaction domain MKS89_07090 PF04012 PspA/IM30 family MKS89_07100 PF04024 PspC domain MKS89_07105 PF01053 Cys/Met metabolism PLP-dependent enzyme MKS89_07110 PF13091 PLD-like domain MKS89_07110 PF13396 Phospholipase_D-nuclease N-terminal MKS89_07115 PF02743 Cache domain MKS89_07115 PF00672 HAMP domain MKS89_07115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_07120 PF00209 Sodium:neurotransmitter symporter family MKS89_07125 PF00849 RNA pseudouridylate synthase MKS89_07130 PF10672 S-adenosylmethionine-dependent methyltransferase MKS89_07130 PF17785 PUA-like domain MKS89_07140 PF06945 Protein of unknown function (DUF1289) MKS89_07155 PF01386 Ribosomal L25p family MKS89_07160 PF00271 Helicase conserved C-terminal domain MKS89_07160 PF04851 Type III restriction enzyme, res subunit MKS89_07165 PF01479 S4 domain MKS89_07165 PF00849 RNA pseudouridylate synthase MKS89_07170 PF07690 Major Facilitator Superfamily MKS89_07185 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_07185 PF00107 Zinc-binding dehydrogenase MKS89_07190 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_07200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_07200 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MKS89_07205 PF07729 FCD domain MKS89_07205 PF00392 Bacterial regulatory proteins, gntR family MKS89_07210 PF13378 Enolase C-terminal domain-like MKS89_07210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MKS89_07220 PF00753 Metallo-beta-lactamase superfamily MKS89_07250 PF07729 FCD domain MKS89_07250 PF00392 Bacterial regulatory proteins, gntR family MKS89_07255 PF01063 Amino-transferase class IV MKS89_07260 PF14748 Pyrroline-5-carboxylate reductase dimerisation MKS89_07260 PF03807 NADP oxidoreductase coenzyme F420-dependent MKS89_07280 PF01810 LysE type translocator MKS89_07300 PF01810 LysE type translocator MKS89_07305 PF16861 Carbamoyltransferase C-terminus MKS89_07305 PF02543 Carbamoyltransferase N-terminus MKS89_07315 PF11490 DNA polymerase III polC-type N-terminus II MKS89_07315 PF07733 Bacterial DNA polymerase III alpha NTPase domain MKS89_07315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MKS89_07315 PF14579 Helix-hairpin-helix motif MKS89_07315 PF02811 PHP domain MKS89_07315 PF00929 Exonuclease MKS89_07320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_07320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_07325 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MKS89_07325 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MKS89_07330 PF07690 Major Facilitator Superfamily MKS89_07345 PF07478 D-ala D-ala ligase C-terminus MKS89_07345 PF01820 D-ala D-ala ligase N-terminus MKS89_07370 PF01177 Asp/Glu/Hydantoin racemase MKS89_07375 PF11066 Protein of unknown function (DUF2867) MKS89_07375 PF13460 NAD(P)H-binding MKS89_07380 PF01554 MatE MKS89_07385 PF00005 ABC transporter MKS89_07395 PF06965 Na+/H+ antiporter 1 MKS89_07400 PF00202 Aminotransferase class-III MKS89_07405 PF16653 Saccharopine dehydrogenase C-terminal domain MKS89_07405 PF03435 Saccharopine dehydrogenase NADP binding domain MKS89_07410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKS89_07415 PF00672 HAMP domain MKS89_07415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_07415 PF17200 Single Cache domain 2 MKS89_07425 PF00994 Probable molybdopterin binding domain MKS89_07435 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_07440 PF00268 Ribonucleotide reductase, small chain MKS89_07445 PF03477 ATP cone domain MKS89_07445 PF02867 Ribonucleotide reductase, barrel domain MKS89_07445 PF00317 Ribonucleotide reductase, all-alpha domain MKS89_07455 PF03989 DNA gyrase C-terminal domain, beta-propeller MKS89_07455 PF00521 DNA gyrase/topoisomerase IV, subunit A MKS89_07460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_07460 PF02378 Phosphotransferase system, EIIC MKS89_07460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_07470 PF09261 Alpha mannosidase middle domain MKS89_07470 PF07748 Glycosyl hydrolases family 38 C-terminal domain MKS89_07470 PF01074 Glycosyl hydrolases family 38 N-terminal domain MKS89_07475 PF01418 Helix-turn-helix domain, rpiR family MKS89_07475 PF01380 SIS domain MKS89_07480 PF00480 ROK family MKS89_07490 PF00925 GTP cyclohydrolase II MKS89_07495 PF00753 Metallo-beta-lactamase superfamily MKS89_07510 PF01047 MarR family MKS89_07515 PF02028 BCCT, betaine/carnitine/choline family transporter MKS89_07550 PF00857 Isochorismatase family MKS89_07555 PF00072 Response regulator receiver domain MKS89_07555 PF12431 Transcriptional regulator MKS89_07560 PF17203 Single cache domain 3 MKS89_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_07565 PF03390 2-hydroxycarboxylate transporter family MKS89_07570 PF08218 Citrate lyase ligase C-terminal domain MKS89_07575 PF06857 Malonate decarboxylase delta subunit (MdcD) MKS89_07580 PF03328 HpcH/HpaI aldolase/citrate lyase family MKS89_07585 PF04223 Citrate lyase, alpha subunit (CitF) MKS89_07590 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase MKS89_07595 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase MKS89_07600 PF10672 S-adenosylmethionine-dependent methyltransferase MKS89_07600 PF17785 PUA-like domain MKS89_07605 PF00708 Acylphosphatase MKS89_07610 PF04358 DsrC like protein MKS89_07615 PF01027 Inhibitor of apoptosis-promoting Bax1 MKS89_07620 PF00005 ABC transporter MKS89_07625 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_07630 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_07635 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_07640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_07640 PF10414 Sirohaem synthase dimerisation region MKS89_07640 PF14824 Sirohaem biosynthesis protein central MKS89_07645 PF10928 Protein of unknown function (DUF2810) MKS89_07650 PF04461 Protein of unknown function (DUF520) MKS89_07655 PF00793 DAHP synthetase I family MKS89_07665 PF17783 CvfB-like winged helix domain MKS89_07665 PF13509 S1 domain MKS89_07670 PF01189 16S rRNA methyltransferase RsmB/F MKS89_07670 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MKS89_07670 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MKS89_07675 PF13185 GAF domain MKS89_07680 PF17516 ProQ C-terminal domain MKS89_07680 PF04352 ProQ/FINO family MKS89_07685 PF11818 C-terminal domain of tail specific protease (DUF3340) MKS89_07685 PF00595 PDZ domain MKS89_07685 PF03572 Peptidase family S41 MKS89_07685 PF17804 Tail specific protease N-terminal domain MKS89_07695 PF01433 Peptidase family M1 domain MKS89_07695 PF17432 Domain of unknown function (DUF3458_C) ARM repeats MKS89_07695 PF11940 Domain of unknown function (DUF3458) Ig-like fold MKS89_07705 PF05088 Bacterial NAD-glutamate dehydrogenase MKS89_07710 PF01180 Dihydroorotate dehydrogenase MKS89_07715 PF07126 Cell-division protein ZapC MKS89_07720 PF10672 S-adenosylmethionine-dependent methyltransferase MKS89_07720 PF02926 THUMP domain MKS89_07720 PF01170 Putative RNA methylase family UPF0020 MKS89_07725 PF00005 ABC transporter MKS89_07725 PF16326 ABC transporter C-terminal domain MKS89_07725 PF12848 ABC transporter MKS89_07735 PF04957 Ribosome modulation factor MKS89_07740 PF07977 FabA-like domain MKS89_07745 PF13654 AAA domain MKS89_07745 PF05362 Lon protease (S16) C-terminal proteolytic domain MKS89_07750 PF17414 MatP C-terminal ribbon-helix-helix domain MKS89_07750 PF06303 MatP N-terminal domain MKS89_07760 PF00990 Diguanylate cyclase, GGDEF domain MKS89_07760 PF00072 Response regulator receiver domain MKS89_07775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MKS89_07775 PF00391 PEP-utilising enzyme, mobile domain MKS89_07785 PF00202 Aminotransferase class-III MKS89_07790 PF00891 O-methyltransferase domain MKS89_07790 PF16864 Dimerisation domain MKS89_07800 PF00155 Aminotransferase class I and II MKS89_07800 PF00550 Phosphopantetheine attachment site MKS89_07805 PF00501 AMP-binding enzyme MKS89_07805 PF13193 AMP-binding enzyme C-terminal domain MKS89_07810 PF02801 Beta-ketoacyl synthase, C-terminal domain MKS89_07810 PF00109 Beta-ketoacyl synthase, N-terminal domain MKS89_07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_07835 PF09308 LuxQ, periplasmic MKS89_07835 PF00072 Response regulator receiver domain MKS89_07835 PF00512 His Kinase A (phospho-acceptor) domain MKS89_07850 PF00027 Cyclic nucleotide-binding domain MKS89_07850 PF13545 Crp-like helix-turn-helix domain MKS89_07855 PF00582 Universal stress protein family MKS89_07860 PF01171 PP-loop family MKS89_07875 PF08402 TOBE domain MKS89_07875 PF00005 ABC transporter MKS89_07880 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_07885 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_07890 PF13416 Bacterial extracellular solute-binding protein MKS89_07895 PF02146 Sir2 family MKS89_07900 PF03222 Tryptophan/tyrosine permease family MKS89_07905 PF00909 Ammonium Transporter Family MKS89_07915 PF02954 Bacterial regulatory protein, Fis family MKS89_07915 PF06506 Propionate catabolism activator MKS89_07915 PF00158 Sigma-54 interaction domain MKS89_07920 PF12804 MobA-like NTP transferase domain MKS89_07925 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MKS89_07930 PF00480 ROK family MKS89_07935 PF00672 HAMP domain MKS89_07935 PF12729 Four helix bundle sensory module for signal transduction MKS89_07935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_07945 PF03881 Fructosamine kinase MKS89_07950 PF00677 Lumazine binding domain MKS89_07955 PF01554 MatE MKS89_07960 PF14743 DNA ligase OB-like domain MKS89_07960 PF01068 ATP dependent DNA ligase domain MKS89_07970 PF03544 Gram-negative bacterial TonB protein C-terminal MKS89_07975 PF02472 Biopolymer transport protein ExbD/TolR MKS89_07980 PF01618 MotA/TolQ/ExbB proton channel family MKS89_07985 PF01618 MotA/TolQ/ExbB proton channel family MKS89_07995 PF03009 Glycerophosphoryl diester phosphodiesterase family MKS89_08005 PF01235 Sodium:alanine symporter family MKS89_08020 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MKS89_08035 PF00701 Dihydrodipicolinate synthetase family MKS89_08040 PF00356 Bacterial regulatory proteins, lacI family MKS89_08050 PF01566 Natural resistance-associated macrophage protein MKS89_08055 PF00701 Dihydrodipicolinate synthetase family MKS89_08065 PF01022 Bacterial regulatory protein, arsR family MKS89_08075 PF03358 NADPH-dependent FMN reductase MKS89_08080 PF01758 Sodium Bile acid symporter family MKS89_08095 PF03960 ArsC family MKS89_08100 PF10509 Galactokinase galactose-binding signature MKS89_08100 PF08544 GHMP kinases C terminal MKS89_08100 PF00288 GHMP kinases N terminal domain MKS89_08105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MKS89_08105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MKS89_08110 PF16363 GDP-mannose 4,6 dehydratase MKS89_08115 PF12729 Four helix bundle sensory module for signal transduction MKS89_08115 PF00672 HAMP domain MKS89_08115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_08120 PF02264 LamB porin MKS89_08125 PF08532 Beta-galactosidase trimerisation domain MKS89_08125 PF02449 Beta-galactosidase MKS89_08125 PF08533 Beta-galactosidase C-terminal domain MKS89_08130 PF07745 Glycosyl hydrolase family 53 MKS89_08135 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_08140 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_08145 PF13416 Bacterial extracellular solute-binding protein MKS89_08150 PF00005 ABC transporter MKS89_08150 PF17912 MalK OB fold domain MKS89_08160 PF07745 Glycosyl hydrolase family 53 MKS89_08170 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_08170 PF00107 Zinc-binding dehydrogenase MKS89_08175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_08175 PF12793 Sugar transport-related sRNA regulator N-term MKS89_08185 PF07944 Beta-L-arabinofuranosidase, GH127 MKS89_08205 PF13419 Haloacid dehalogenase-like hydrolase MKS89_08215 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold MKS89_08215 PF11898 Domain of unknown function (DUF3418) MKS89_08215 PF04408 Helicase associated domain (HA2) MKS89_08215 PF00271 Helicase conserved C-terminal domain MKS89_08215 PF00270 DEAD/DEAH box helicase MKS89_08240 PF04055 Radical SAM superfamily MKS89_08240 PF18693 TRAM domain MKS89_08240 PF00919 Uncharacterized protein family UPF0004 MKS89_08260 PF00012 Hsp70 protein MKS89_08265 PF00012 Hsp70 protein MKS89_08275 PF06508 Queuosine biosynthesis protein QueC MKS89_08280 PF04055 Radical SAM superfamily MKS89_08290 PF00583 Acetyltransferase (GNAT) family MKS89_08295 PF16177 Acetyl-coenzyme A synthetase N-terminus MKS89_08295 PF00501 AMP-binding enzyme MKS89_08295 PF13193 AMP-binding enzyme C-terminal domain MKS89_08300 PF03972 MmgE/PrpD family MKS89_08305 PF00285 Citrate synthase, C-terminal domain MKS89_08315 PF00392 Bacterial regulatory proteins, gntR family MKS89_08315 PF07729 FCD domain MKS89_08320 PF13302 Acetyltransferase (GNAT) domain MKS89_08325 PF18024 Helix-turn-helix domain MKS89_08325 PF00158 Sigma-54 interaction domain MKS89_08330 PF05128 Domain of unknown function (DUF697) MKS89_08335 PF04317 YcjX-like family, DUF463 MKS89_08345 PF00892 EamA-like transporter family MKS89_08370 PF04715 Anthranilate synthase component I, N terminal region MKS89_08370 PF00425 chorismate binding enzyme MKS89_08375 PF00293 NUDIX domain MKS89_08380 PF03313 Serine dehydratase alpha chain MKS89_08380 PF03315 Serine dehydratase beta chain MKS89_08385 PF01242 6-pyruvoyl tetrahydropterin synthase MKS89_08390 PF00970 Oxidoreductase FAD-binding domain MKS89_08390 PF00042 Globin MKS89_08390 PF00175 Oxidoreductase NAD-binding domain MKS89_08395 PF00355 Rieske [2Fe-2S] domain MKS89_08395 PF00848 Ring hydroxylating alpha subunit (catalytic domain) MKS89_08400 PF00367 phosphotransferase system, EIIB MKS89_08400 PF02378 Phosphotransferase system, EIIC MKS89_08400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_08410 PF02028 BCCT, betaine/carnitine/choline family transporter MKS89_08415 PF02310 B12 binding domain MKS89_08415 PF02607 B12 binding domain MKS89_08415 PF02965 Vitamin B12 dependent methionine synthase, activation domain MKS89_08415 PF00809 Pterin binding enzyme MKS89_08415 PF02574 Homocysteine S-methyltransferase MKS89_08430 PF01032 FecCD transport family MKS89_08435 PF01032 FecCD transport family MKS89_08440 PF00005 ABC transporter MKS89_08445 PF03466 LysR substrate binding domain MKS89_08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_08450 PF07715 TonB-dependent Receptor Plug Domain MKS89_08450 PF00593 TonB dependent receptor MKS89_08455 PF12729 Four helix bundle sensory module for signal transduction MKS89_08455 PF00672 HAMP domain MKS89_08455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_08485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_08485 PF03466 LysR substrate binding domain MKS89_08510 PF01037 Lrp/AsnC ligand binding domain MKS89_08525 PF01566 Natural resistance-associated macrophage protein MKS89_08530 PF02742 Iron dependent repressor, metal binding and dimerisation domain MKS89_08530 PF01325 Iron dependent repressor, N-terminal DNA binding domain MKS89_08565 PF00990 Diguanylate cyclase, GGDEF domain MKS89_08565 PF08448 PAS fold MKS89_08615 PF03527 RHS protein MKS89_08615 PF05593 RHS Repeat MKS89_08625 PF18284 DNA methylase N-terminal domain MKS89_08625 PF00145 C-5 cytosine-specific DNA methylase MKS89_08640 PF03527 RHS protein MKS89_08640 PF14220 Domain of unknown function (DUF4329) MKS89_08640 PF05593 RHS Repeat MKS89_08655 PF05593 RHS Repeat MKS89_08655 PF03527 RHS protein MKS89_08665 PF04717 Type VI secretion system, phage-baseplate injector MKS89_08675 PF02028 BCCT, betaine/carnitine/choline family transporter MKS89_08685 PF00766 Electron transfer flavoprotein FAD-binding domain MKS89_08685 PF01012 Electron transfer flavoprotein domain MKS89_08690 PF13183 4Fe-4S dicluster domain MKS89_08690 PF02754 Cysteine-rich domain MKS89_08695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKS89_08710 PF12833 Helix-turn-helix domain MKS89_08710 PF01965 DJ-1/PfpI family MKS89_08715 PF03313 Serine dehydratase alpha chain MKS89_08715 PF03315 Serine dehydratase beta chain MKS89_08720 PF00551 Formyl transferase MKS89_08725 PF04268 Sarcosine oxidase, gamma subunit family MKS89_08730 PF01571 Aminomethyltransferase folate-binding domain MKS89_08730 PF08669 Glycine cleavage T-protein C-terminal barrel domain MKS89_08730 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_08730 PF17806 Sarcosine oxidase A3 domain MKS89_08740 PF01266 FAD dependent oxidoreductase MKS89_08745 PF00464 Serine hydroxymethyltransferase MKS89_08750 PF00152 tRNA synthetases class II (D, K and N) MKS89_08750 PF01336 OB-fold nucleic acid binding domain MKS89_08755 PF00155 Aminotransferase class I and II MKS89_08765 PF00563 EAL domain MKS89_08765 PF00990 Diguanylate cyclase, GGDEF domain MKS89_08765 PF03707 Bacterial signalling protein N terminal repeat MKS89_08770 PF07969 Amidohydrolase family MKS89_08775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_08775 PF00672 HAMP domain MKS89_08775 PF02743 Cache domain MKS89_08780 PF00672 HAMP domain MKS89_08780 PF17200 Single Cache domain 2 MKS89_08780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_08790 PF02470 MlaD protein MKS89_08795 PF04403 Paraquat-inducible protein A MKS89_08805 PF02685 Glucokinase MKS89_08815 PF07702 UTRA domain MKS89_08815 PF00392 Bacterial regulatory proteins, gntR family MKS89_08840 PF00005 ABC transporter MKS89_08840 PF08402 TOBE domain MKS89_08850 PF00155 Aminotransferase class I and II MKS89_08855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase MKS89_08890 PF11713 Peptidase C80 family MKS89_08890 PF12919 TcdA/TcdB catalytic glycosyltransferase domain MKS89_08890 PF12918 TcdB toxin N-terminal helical domain MKS89_08890 PF12920 TcdA/TcdB pore forming domain MKS89_08895 PF12804 MobA-like NTP transferase domain MKS89_08895 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_08915 PF01177 Asp/Glu/Hydantoin racemase MKS89_08920 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_08925 PF14785 Maltose transport system permease protein MalF P2 domain MKS89_08925 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_08930 PF01547 Bacterial extracellular solute-binding protein MKS89_08935 PF08402 TOBE domain MKS89_08935 PF00005 ABC transporter MKS89_08940 PF02446 4-alpha-glucanotransferase MKS89_08945 PF00343 Carbohydrate phosphorylase MKS89_08950 PF17874 MalT-like TPR region MKS89_08950 PF00196 Bacterial regulatory proteins, luxR family MKS89_08980 PF00990 Diguanylate cyclase, GGDEF domain MKS89_08990 PF00072 Response regulator receiver domain MKS89_08990 PF01584 CheW-like domain MKS89_09000 PF04204 Homoserine O-succinyltransferase MKS89_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_09015 PF03466 LysR substrate binding domain MKS89_09020 PF07690 Major Facilitator Superfamily MKS89_09035 PF02321 Outer membrane efflux protein MKS89_09040 PF05736 OprF membrane domain MKS89_09040 PF00691 OmpA family MKS89_09050 PF00005 ABC transporter MKS89_09055 PF01032 FecCD transport family MKS89_09060 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MKS89_09065 PF02654 Cobalamin-5-phosphate synthase MKS89_09070 PF02277 Phosphoribosyltransferase MKS89_09205 PF01381 Helix-turn-helix MKS89_09205 PF00717 Peptidase S24-like MKS89_09210 PF08411 Exonuclease C-terminal MKS89_09210 PF00929 Exonuclease MKS89_09215 PF03788 LrgA family MKS89_09220 PF04172 LrgB-like family MKS89_09225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKS89_09225 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region MKS89_09230 PF02222 ATP-grasp domain MKS89_09235 PF05724 Thiopurine S-methyltransferase (TPMT) MKS89_09240 PF00216 Bacterial DNA-binding protein MKS89_09245 PF01588 Putative tRNA binding domain MKS89_09245 PF03147 Ferredoxin-fold anticodon binding domain MKS89_09245 PF03483 B3/4 domain MKS89_09245 PF03484 tRNA synthetase B5 domain MKS89_09245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MKS89_09250 PF01409 tRNA synthetases class II core domain (F) MKS89_09250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MKS89_09280 PF01370 NAD dependent epimerase/dehydratase family MKS89_09285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKS89_09285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKS89_09310 PF00265 Thymidine kinase MKS89_09315 PF00152 tRNA synthetases class II (D, K and N) MKS89_09315 PF01336 OB-fold nucleic acid binding domain MKS89_09315 PF02938 GAD domain MKS89_09320 PF01904 Protein of unknown function DUF72 MKS89_09325 PF13649 Methyltransferase domain MKS89_09330 PF08003 Protein of unknown function (DUF1698) MKS89_09335 PF08443 RimK-like ATP-grasp domain MKS89_09335 PF18030 RimK PreATP-grasp domain MKS89_09345 PF08443 RimK-like ATP-grasp domain MKS89_09345 PF18030 RimK PreATP-grasp domain MKS89_09350 PF00535 Glycosyl transferase family 2 MKS89_09365 PF16330 MukB hinge domain MKS89_09365 PF04310 MukB N-terminal MKS89_09370 PF04288 MukE-like family MKS89_09375 PF17193 MukF C-terminal domain MKS89_09375 PF17192 MukF middle domain MKS89_09375 PF03882 MukF winged-helix domain MKS89_09380 PF13847 Methyltransferase domain MKS89_09385 PF02698 DUF218 domain MKS89_09390 PF00356 Bacterial regulatory proteins, lacI family MKS89_09395 PF04993 TfoX N-terminal domain MKS89_09395 PF04994 TfoX C-terminal domain MKS89_09400 PF00534 Glycosyl transferases group 1 MKS89_09400 PF08323 Starch synthase catalytic domain MKS89_09405 PF00483 Nucleotidyl transferase MKS89_09410 PF01396 Topoisomerase DNA binding C4 zinc finger MKS89_09410 PF01751 Toprim domain MKS89_09410 PF01131 DNA topoisomerase MKS89_09410 PF08272 Topoisomerase I zinc-ribbon-like MKS89_09415 PF10692 Protein of unknown function (DUF2498) MKS89_09420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKS89_09430 PF03588 Leucyl/phenylalanyl-tRNA protein transferase MKS89_09435 PF04377 Arginine-tRNA-protein transferase, C terminus MKS89_09435 PF04376 Arginine-tRNA-protein transferase, N terminus MKS89_09440 PF01176 Translation initiation factor 1A / IF-1 MKS89_09445 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_09445 PF07724 AAA domain (Cdc48 subfamily) MKS89_09445 PF17871 AAA lid domain MKS89_09445 PF02861 Clp amino terminal domain, pathogenicity island component MKS89_09445 PF10431 C-terminal, D2-small domain, of ClpB protein MKS89_09450 PF02617 ATP-dependent Clp protease adaptor protein ClpS MKS89_09455 PF00313 'Cold-shock' DNA-binding domain MKS89_09460 PF03971 Monomeric isocitrate dehydrogenase MKS89_09465 PF00849 RNA pseudouridylate synthase MKS89_09470 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MKS89_09470 PF01502 Phosphoribosyl-AMP cyclohydrolase MKS89_09475 PF00977 Histidine biosynthesis protein MKS89_09480 PF00977 Histidine biosynthesis protein MKS89_09485 PF00117 Glutamine amidotransferase class-I MKS89_09490 PF00475 Imidazoleglycerol-phosphate dehydratase MKS89_09490 PF08645 Polynucleotide kinase 3 phosphatase MKS89_09495 PF00155 Aminotransferase class I and II MKS89_09500 PF00815 Histidinol dehydrogenase MKS89_09505 PF01634 ATP phosphoribosyltransferase MKS89_09505 PF08029 HisG, C-terminal domain MKS89_09510 PF03553 Na+/H+ antiporter family MKS89_09515 PF00816 H-NS histone family MKS89_09520 PF00294 pfkB family carbohydrate kinase MKS89_09530 PF04356 Protein of unknown function (DUF489) MKS89_09535 PF00206 Lyase MKS89_09535 PF08328 Adenylosuccinate lyase C-terminal MKS89_09540 PF01435 Peptidase family M48 MKS89_09550 PF03738 Glutathionylspermidine synthase preATP-grasp MKS89_09560 PF04012 PspA/IM30 family MKS89_09565 PF00764 Arginosuccinate synthase MKS89_09575 PF03994 Domain of Unknown Function (DUF350) MKS89_09580 PF06693 Protein of unknown function (DUF1190) MKS89_09590 PF08241 Methyltransferase domain MKS89_09595 PF00155 Aminotransferase class I and II MKS89_09600 PF06968 Biotin and Thiamin Synthesis associated domain MKS89_09600 PF04055 Radical SAM superfamily MKS89_09605 PF00202 Aminotransferase class-III MKS89_09620 PF01757 Acyltransferase family MKS89_09620 PF00842 Alanine racemase, C-terminal domain MKS89_09620 PF01168 Alanine racemase, N-terminal domain MKS89_09630 PF04116 Fatty acid hydroxylase superfamily MKS89_09655 PF00005 ABC transporter MKS89_09655 PF12848 ABC transporter MKS89_09675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_09675 PF00512 His Kinase A (phospho-acceptor) domain MKS89_09675 PF00672 HAMP domain MKS89_09685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKS89_09685 PF02403 Seryl-tRNA synthetase N-terminal domain MKS89_09690 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_09690 PF16193 AAA C-terminal domain MKS89_09690 PF12002 MgsA AAA+ ATPase C terminal MKS89_09695 PF03548 Outer membrane lipoprotein carrier protein LolA MKS89_09700 PF02810 SEC-C motif MKS89_09700 PF07517 SecA DEAD-like domain MKS89_09700 PF01043 SecA preprotein cross-linking domain MKS89_09700 PF07516 SecA Wing and Scaffold domain MKS89_09705 PF01207 Dihydrouridine synthase (Dus) MKS89_09710 PF00990 Diguanylate cyclase, GGDEF domain MKS89_09710 PF00072 Response regulator receiver domain MKS89_09720 PF00005 ABC transporter MKS89_09725 PF02653 Branched-chain amino acid transport system / permease component MKS89_09735 PF04217 Protein of unknown function, DUF412 MKS89_09740 PF00871 Acetokinase family MKS89_09745 PF07085 DRTGG domain MKS89_09745 PF01515 Phosphate acetyl/butaryl transferase MKS89_09750 PF13409 Glutathione S-transferase, N-terminal domain MKS89_09755 PF00294 pfkB family carbohydrate kinase MKS89_09760 PF08244 Glycosyl hydrolases family 32 C terminal MKS89_09760 PF00251 Glycosyl hydrolases family 32 N-terminal domain MKS89_09765 PF00356 Bacterial regulatory proteins, lacI family MKS89_09770 PF00367 phosphotransferase system, EIIB MKS89_09770 PF02378 Phosphotransferase system, EIIC MKS89_09775 PF00672 HAMP domain MKS89_09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_09775 PF00512 His Kinase A (phospho-acceptor) domain MKS89_09780 PF00072 Response regulator receiver domain MKS89_09780 PF00486 Transcriptional regulatory protein, C terminal MKS89_09785 PF00005 ABC transporter MKS89_09790 PF01032 FecCD transport family MKS89_09795 PF08543 Phosphomethylpyrimidine kinase MKS89_09800 PF02954 Bacterial regulatory protein, Fis family MKS89_09800 PF00072 Response regulator receiver domain MKS89_09800 PF00158 Sigma-54 interaction domain MKS89_09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_09805 PF00512 His Kinase A (phospho-acceptor) domain MKS89_09805 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_09810 PF00512 His Kinase A (phospho-acceptor) domain MKS89_09810 PF00989 PAS fold MKS89_09820 PF00072 Response regulator receiver domain MKS89_09835 PF05368 NmrA-like family MKS89_09840 PF01638 HxlR-like helix-turn-helix MKS89_09845 PF02321 Outer membrane efflux protein MKS89_09850 PF00873 AcrB/AcrD/AcrF family MKS89_09855 PF00529 HlyD membrane-fusion protein of T1SS MKS89_09855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_09860 PF01063 Amino-transferase class IV MKS89_09865 PF13378 Enolase C-terminal domain-like MKS89_09865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MKS89_09875 PF01168 Alanine racemase, N-terminal domain MKS89_09875 PF00842 Alanine racemase, C-terminal domain MKS89_09880 PF03746 LamB/YcsF family MKS89_09885 PF02626 Carboxyltransferase domain, subdomain A and B MKS89_09890 PF02682 Carboxyltransferase domain, subdomain C and D MKS89_09895 PF00563 EAL domain MKS89_09895 PF12792 CSS motif domain associated with EAL MKS89_09900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MKS89_09900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MKS89_09905 PF00150 Cellulase (glycosyl hydrolase family 5) MKS89_09905 PF00553 Cellulose binding domain MKS89_09905 PF02013 Cellulose or protein binding domain MKS89_09920 PF01810 LysE type translocator MKS89_09925 PF07690 Major Facilitator Superfamily MKS89_09940 PF01810 LysE type translocator MKS89_09945 PF01810 LysE type translocator MKS89_09975 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 MKS89_09975 PF03515 Colicin-like bacteriocin tRNase domain MKS89_09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_09995 PF03466 LysR substrate binding domain MKS89_10005 PF03618 Kinase/pyrophosphorylase MKS89_10010 PF00391 PEP-utilising enzyme, mobile domain MKS89_10010 PF02896 PEP-utilising enzyme, TIM barrel domain MKS89_10010 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MKS89_10015 PF00392 Bacterial regulatory proteins, gntR family MKS89_10015 PF00155 Aminotransferase class I and II MKS89_10025 PF00672 HAMP domain MKS89_10025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_10025 PF12729 Four helix bundle sensory module for signal transduction MKS89_10030 PF03390 2-hydroxycarboxylate transporter family MKS89_10035 PF02910 Fumarate reductase flavoprotein C-term MKS89_10035 PF00890 FAD binding domain MKS89_10040 PF13183 4Fe-4S dicluster domain MKS89_10040 PF13085 2Fe-2S iron-sulfur cluster binding domain MKS89_10045 PF02300 Fumarate reductase subunit C MKS89_10050 PF02313 Fumarate reductase subunit D MKS89_10055 PF03605 Anaerobic c4-dicarboxylate membrane transporter MKS89_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_10060 PF00989 PAS fold MKS89_10060 PF17203 Single cache domain 3 MKS89_10060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain MKS89_10065 PF00072 Response regulator receiver domain MKS89_10065 PF08279 HTH domain MKS89_10070 PF00990 Diguanylate cyclase, GGDEF domain MKS89_10070 PF00563 EAL domain MKS89_10070 PF03707 Bacterial signalling protein N terminal repeat MKS89_10075 PF01266 FAD dependent oxidoreductase MKS89_10075 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MKS89_10080 PF08220 DeoR-like helix-turn-helix domain MKS89_10080 PF00455 DeoR C terminal sensor domain MKS89_10090 PF07690 Major Facilitator Superfamily MKS89_10095 PF00544 Pectate lyase MKS89_10105 PF13609 Gram-negative porin MKS89_10110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MKS89_10115 PF13411 MerR HTH family regulatory protein MKS89_10125 PF08496 Peptidase family S49 N-terminal MKS89_10125 PF01343 Peptidase family S49 MKS89_10130 PF00106 short chain dehydrogenase MKS89_10135 PF00072 Response regulator receiver domain MKS89_10135 PF01584 CheW-like domain MKS89_10140 PF00480 ROK family MKS89_10145 PF00224 Pyruvate kinase, barrel domain MKS89_10145 PF02887 Pyruvate kinase, alpha/beta domain MKS89_10150 PF01734 Patatin-like phospholipase MKS89_10160 PF00209 Sodium:neurotransmitter symporter family MKS89_10175 PF00367 phosphotransferase system, EIIB MKS89_10175 PF02378 Phosphotransferase system, EIIC MKS89_10180 PF01026 TatD related DNase MKS89_10185 PF09115 DNA polymerase III, delta subunit, C terminal MKS89_10190 PF02223 Thymidylate kinase MKS89_10195 PF02618 YceG-like family MKS89_10200 PF01063 Amino-transferase class IV MKS89_10205 PF00109 Beta-ketoacyl synthase, N-terminal domain MKS89_10205 PF02801 Beta-ketoacyl synthase, C-terminal domain MKS89_10210 PF00550 Phosphopantetheine attachment site MKS89_10220 PF00698 Acyl transferase domain MKS89_10225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKS89_10225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKS89_10230 PF02504 Fatty acid synthesis protein MKS89_10235 PF01783 Ribosomal L32p protein family MKS89_10240 PF02620 Large ribosomal RNA subunit accumulation protein YceD MKS89_10245 PF02545 Maf-like protein MKS89_10250 PF00849 RNA pseudouridylate synthase MKS89_10250 PF01479 S4 domain MKS89_10255 PF12111 Polyribonucleotide phosphorylase C terminal MKS89_10255 PF10150 Ribonuclease E/G family MKS89_10255 PF00575 S1 RNA binding domain MKS89_10260 PF01740 STAS domain MKS89_10260 PF00916 Sulfate permease family MKS89_10265 PF00171 Aldehyde dehydrogenase family MKS89_10265 PF00465 Iron-containing alcohol dehydrogenase MKS89_10270 PF00520 Ion transport protein MKS89_10270 PF00027 Cyclic nucleotide-binding domain MKS89_10275 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKS89_10275 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKS89_10280 PF03502 Nucleoside-specific channel-forming protein, Tsx MKS89_10285 PF04245 37-kD nucleoid-associated bacterial protein MKS89_10290 PF07208 Protein of unknown function (DUF1414) MKS89_10295 PF11893 Domain of unknown function (DUF3413) MKS89_10295 PF00884 Sulfatase MKS89_10315 PF00589 Phage integrase family MKS89_10315 PF12167 Arm DNA-binding domain MKS89_10345 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MKS89_10360 PF16925 Tetracyclin repressor-like, C-terminal domain MKS89_10360 PF00440 Bacterial regulatory proteins, tetR family MKS89_10365 PF07690 Major Facilitator Superfamily MKS89_10405 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_10410 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_10415 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_10420 PF00005 ABC transporter MKS89_10425 PF01112 Asparaginase MKS89_10430 PF01168 Alanine racemase, N-terminal domain MKS89_10440 PF00710 Asparaginase, N-terminal MKS89_10440 PF17763 Glutaminase/Asparaginase C-terminal domain MKS89_10445 PF01970 Tripartite tricarboxylate transporter TctA family MKS89_10455 PF03401 Tripartite tricarboxylate transporter family receptor MKS89_10460 PF00701 Dihydrodipicolinate synthetase family MKS89_10465 PF00294 pfkB family carbohydrate kinase MKS89_10470 PF00990 Diguanylate cyclase, GGDEF domain MKS89_10485 PF00135 Carboxylesterase family MKS89_10490 PF05971 RNA methyltransferase MKS89_10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_10495 PF00512 His Kinase A (phospho-acceptor) domain MKS89_10500 PF02954 Bacterial regulatory protein, Fis family MKS89_10500 PF00072 Response regulator receiver domain MKS89_10500 PF00158 Sigma-54 interaction domain MKS89_10505 PF00005 ABC transporter MKS89_10505 PF02687 FtsX-like permease family MKS89_10505 PF12704 MacB-like periplasmic core domain MKS89_10510 PF00005 ABC transporter MKS89_10510 PF02687 FtsX-like permease family MKS89_10510 PF12704 MacB-like periplasmic core domain MKS89_10530 PF13419 Haloacid dehalogenase-like hydrolase MKS89_10540 PF00005 ABC transporter MKS89_10550 PF00563 EAL domain MKS89_10550 PF00990 Diguanylate cyclase, GGDEF domain MKS89_10550 PF03707 Bacterial signalling protein N terminal repeat MKS89_10555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_10560 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_10565 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_10565 PF12911 N-terminal TM domain of oligopeptide transport permease C MKS89_10570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_10570 PF00005 ABC transporter MKS89_10575 PF00005 ABC transporter MKS89_10575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_10580 PF12833 Helix-turn-helix domain MKS89_10580 PF02311 AraC-like ligand binding domain MKS89_10590 PF16884 N-terminal domain of oxidoreductase MKS89_10590 PF00107 Zinc-binding dehydrogenase MKS89_10600 PF01131 DNA topoisomerase MKS89_10600 PF01751 Toprim domain MKS89_10605 PF00462 Glutaredoxin MKS89_10610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MKS89_10610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MKS89_10625 PF04333 MlaA lipoprotein MKS89_10635 PF01584 CheW-like domain MKS89_10645 PF13614 AAA domain MKS89_10650 PF01339 CheB methylesterase MKS89_10650 PF00072 Response regulator receiver domain MKS89_10655 PF01584 CheW-like domain MKS89_10655 PF02895 Signal transducing histidine kinase, homodimeric domain MKS89_10655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_10655 PF01627 Hpt domain MKS89_10655 PF00072 Response regulator receiver domain MKS89_10660 PF04344 Chemotaxis phosphatase, CheZ MKS89_10665 PF00072 Response regulator receiver domain MKS89_10670 PF04542 Sigma-70 region 2 MKS89_10670 PF04545 Sigma-70, region 4 MKS89_10670 PF04539 Sigma-70 region 3 MKS89_10675 PF10609 NUBPL iron-transfer P-loop NTPase MKS89_10680 PF00448 SRP54-type protein, GTPase domain MKS89_10685 PF00771 FHIPEP family MKS89_10690 PF00300 Histidine phosphatase superfamily (branch 1) MKS89_10695 PF00675 Insulinase (Peptidase family M16) MKS89_10695 PF05193 Peptidase M16 inactive domain MKS89_10695 PF16187 Middle or third domain of peptidase_M16 MKS89_10700 PF06185 YecM protein MKS89_10705 PF00750 tRNA synthetases class I (R) MKS89_10705 PF05746 DALR anticodon binding domain MKS89_10705 PF03485 Arginyl tRNA synthetase N terminal domain MKS89_10725 PF02421 Ferrous iron transport protein B MKS89_10725 PF07664 Ferrous iron transport protein B C terminus MKS89_10725 PF07670 Nucleoside recognition MKS89_10730 PF04023 FeoA domain MKS89_10735 PF01297 Zinc-uptake complex component A periplasmic MKS89_10740 PF00005 ABC transporter MKS89_10745 PF00950 ABC 3 transport family MKS89_10750 PF00549 CoA-ligase MKS89_10750 PF02629 CoA binding domain MKS89_10755 PF00549 CoA-ligase MKS89_10755 PF08442 ATP-grasp domain MKS89_10760 PF02817 e3 binding domain MKS89_10760 PF00364 Biotin-requiring enzyme MKS89_10760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKS89_10765 PF16870 2-oxoglutarate dehydrogenase C-terminal MKS89_10765 PF00676 Dehydrogenase E1 component MKS89_10765 PF16078 2-oxoglutarate dehydrogenase N-terminus MKS89_10765 PF02779 Transketolase, pyrimidine binding domain MKS89_10770 PF13085 2Fe-2S iron-sulfur cluster binding domain MKS89_10775 PF02910 Fumarate reductase flavoprotein C-term MKS89_10775 PF00890 FAD binding domain MKS89_10780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MKS89_10785 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MKS89_10790 PF00285 Citrate synthase, C-terminal domain MKS89_10795 PF01784 NIF3 (NGG1p interacting factor 3) MKS89_10815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKS89_10815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKS89_10815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKS89_10815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKS89_10820 PF03925 SeqA protein C-terminal domain MKS89_10820 PF17206 SeqA protein N-terminal domain MKS89_10825 PF00561 alpha/beta hydrolase fold MKS89_10830 PF00258 Flavodoxin MKS89_10835 PF01475 Ferric uptake regulator family MKS89_10840 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKS89_10840 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKS89_10845 PF11890 Domain of unknown function (DUF3410) MKS89_10845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_10845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_10850 PF00109 Beta-ketoacyl synthase, N-terminal domain MKS89_10850 PF02801 Beta-ketoacyl synthase, C-terminal domain MKS89_10855 PF01266 FAD dependent oxidoreductase MKS89_10855 PF05430 S-adenosyl-L-methionine-dependent methyltransferase MKS89_10860 PF03358 NADPH-dependent FMN reductase MKS89_10865 PF08891 YfcL protein MKS89_10870 PF04315 Elongation factor P hydroxylase MKS89_10875 PF01264 Chorismate synthase MKS89_10880 PF05175 Methyltransferase small domain MKS89_10885 PF01713 Smr domain MKS89_10890 PF01312 FlhB HrpN YscU SpaS Family MKS89_10895 PF01311 Bacterial export proteins, family 1 MKS89_10900 PF01313 Bacterial export proteins, family 3 MKS89_10905 PF00813 FliP family MKS89_10910 PF04347 Flagellar biosynthesis protein, FliO MKS89_10915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MKS89_10920 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term MKS89_10920 PF02154 Flagellar motor switch protein FliM MKS89_10925 PF03748 Flagellar basal body-associated protein FliL MKS89_10940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKS89_10940 PF18269 T3SS EscN ATPase C-terminal domain MKS89_10950 PF01706 FliG C-terminal domain MKS89_10950 PF14841 FliG middle domain MKS89_10950 PF14842 FliG N-terminal domain MKS89_10955 PF01514 Secretory protein of YscJ/FliF family MKS89_10955 PF08345 Flagellar M-ring protein C-terminal MKS89_10960 PF02049 Flagellar hook-basal body complex protein FliE MKS89_10965 PF02954 Bacterial regulatory protein, Fis family MKS89_10965 PF00072 Response regulator receiver domain MKS89_10965 PF00158 Sigma-54 interaction domain MKS89_10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_10970 PF00512 His Kinase A (phospho-acceptor) domain MKS89_10970 PF13188 PAS domain MKS89_10975 PF06490 Flagellar regulatory protein FleQ MKS89_10975 PF02954 Bacterial regulatory protein, Fis family MKS89_10975 PF00158 Sigma-54 interaction domain MKS89_10980 PF02561 Flagellar protein FliS MKS89_10990 PF07196 Flagellin hook IN motif MKS89_10990 PF07195 Flagellar hook-associated protein 2 C-terminus MKS89_10990 PF02465 Flagellar hook-associated protein 2 N-terminus MKS89_10995 PF03646 FlaG protein MKS89_11000 PF00700 Bacterial flagellin C-terminal helical region MKS89_11000 PF07196 Flagellin hook IN motif MKS89_11000 PF00669 Bacterial flagellin N-terminal helical region MKS89_11005 PF00700 Bacterial flagellin C-terminal helical region MKS89_11005 PF07196 Flagellin hook IN motif MKS89_11005 PF00669 Bacterial flagellin N-terminal helical region MKS89_11010 PF07196 Flagellin hook IN motif MKS89_11010 PF00669 Bacterial flagellin N-terminal helical region MKS89_11010 PF00700 Bacterial flagellin C-terminal helical region MKS89_11015 PF04261 Dyp-type peroxidase family MKS89_11025 PF03960 ArsC family MKS89_11030 PF01546 Peptidase family M20/M25/M40 MKS89_11030 PF07687 Peptidase dimerisation domain MKS89_11035 PF02557 D-alanyl-D-alanine carboxypeptidase MKS89_11045 PF06804 NlpB/DapX lipoprotein MKS89_11050 PF00701 Dihydrodipicolinate synthetase family MKS89_11055 PF00578 AhpC/TSA family MKS89_11060 PF02743 Cache domain MKS89_11060 PF00672 HAMP domain MKS89_11060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_11065 PF01594 AI-2E family transporter MKS89_11070 PF01435 Peptidase family M48 MKS89_11070 PF13181 Tetratricopeptide repeat MKS89_11075 PF03960 ArsC family MKS89_11080 PF03358 NADPH-dependent FMN reductase MKS89_11090 PF00860 Permease family MKS89_11095 PF04073 Aminoacyl-tRNA editing domain MKS89_11100 PF02872 5'-nucleotidase, C-terminal domain MKS89_11100 PF00149 Calcineurin-like phosphoesterase MKS89_11105 PF00793 DAHP synthetase I family MKS89_11110 PF13369 Transglutaminase-like superfamily MKS89_11115 PF04247 Invasion gene expression up-regulator, SirB MKS89_11120 PF13847 Methyltransferase domain MKS89_11120 PF17827 PrmC N-terminal domain MKS89_11125 PF03462 PCRF domain MKS89_11125 PF00472 RF-1 domain MKS89_11130 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MKS89_11130 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MKS89_11130 PF01488 Shikimate / quinate 5-dehydrogenase MKS89_11135 PF03550 Outer membrane lipoprotein LolB MKS89_11140 PF00288 GHMP kinases N terminal domain MKS89_11140 PF08544 GHMP kinases C terminal MKS89_11145 PF14572 Phosphoribosyl synthetase-associated domain MKS89_11145 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MKS89_11150 PF01195 Peptidyl-tRNA hydrolase MKS89_11155 PF01926 50S ribosome-binding GTPase MKS89_11155 PF06071 Protein of unknown function (DUF933) MKS89_11225 PF00669 Bacterial flagellin N-terminal helical region MKS89_11225 PF07196 Flagellin hook IN motif MKS89_11225 PF00700 Bacterial flagellin C-terminal helical region MKS89_11230 PF00669 Bacterial flagellin N-terminal helical region MKS89_11230 PF00700 Bacterial flagellin C-terminal helical region MKS89_11230 PF07196 Flagellin hook IN motif MKS89_11235 PF00669 Bacterial flagellin N-terminal helical region MKS89_11240 PF07196 Flagellin hook IN motif MKS89_11240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKS89_11245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKS89_11245 PF10135 Rod binding protein MKS89_11250 PF02119 Flagellar P-ring protein MKS89_11255 PF02107 Flagellar L-ring protein MKS89_11260 PF00460 Flagella basal body rod protein MKS89_11260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKS89_11265 PF00460 Flagella basal body rod protein MKS89_11265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKS89_11270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKS89_11270 PF00460 Flagella basal body rod protein MKS89_11270 PF07559 Flagellar basal body protein FlaE MKS89_11275 PF03963 Flagellar hook capping protein - N-terminal region MKS89_11275 PF13860 FlgD Ig-like domain MKS89_11275 PF13861 FlgD Tudor-like domain MKS89_11280 PF00460 Flagella basal body rod protein MKS89_11280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal MKS89_11285 PF00460 Flagella basal body rod protein MKS89_11290 PF01739 CheR methyltransferase, SAM binding domain MKS89_11290 PF03705 CheR methyltransferase, all-alpha domain MKS89_11295 PF00072 Response regulator receiver domain MKS89_11295 PF01584 CheW-like domain MKS89_11340 PF03922 OmpW family MKS89_11355 PF01047 MarR family MKS89_11365 PF00691 OmpA family MKS89_11365 PF01389 OmpA-like transmembrane domain MKS89_11370 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKS89_11375 PF00403 Heavy-metal-associated domain MKS89_11380 PF01963 TraB family MKS89_11390 PF01713 Smr domain MKS89_11400 PF00586 AIR synthase related protein, N-terminal domain MKS89_11400 PF02769 AIR synthase related protein, C-terminal domain MKS89_11405 PF00551 Formyl transferase MKS89_11410 PF00293 NUDIX domain MKS89_11415 PF13230 Glutamine amidotransferases class-II MKS89_11420 PF13580 SIS domain MKS89_11425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKS89_11425 PF09317 Domain of unknown function (DUF1974) MKS89_11425 PF02770 Acyl-CoA dehydrogenase, middle domain MKS89_11425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKS89_11435 PF00929 Exonuclease MKS89_11440 PF00075 RNase H MKS89_11445 PF08241 Methyltransferase domain MKS89_11450 PF16123 Hydroxyacylglutathione hydrolase C-terminus MKS89_11450 PF00753 Metallo-beta-lactamase superfamily MKS89_11455 PF01476 LysM domain MKS89_11455 PF01464 Transglycosylase SLT domain MKS89_11465 PF00543 Nitrogen regulatory protein P-II MKS89_11470 PF01171 PP-loop family MKS89_11470 PF09179 TilS substrate binding domain MKS89_11470 PF11734 TilS substrate C-terminal domain MKS89_11475 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MKS89_11480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MKS89_11480 PF01336 OB-fold nucleic acid binding domain MKS89_11480 PF02811 PHP domain MKS89_11480 PF07733 Bacterial DNA polymerase III alpha NTPase domain MKS89_11480 PF14579 Helix-hairpin-helix motif MKS89_11485 PF01351 Ribonuclease HII MKS89_11490 PF02684 Lipid-A-disaccharide synthetase MKS89_11495 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 MKS89_11495 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_11500 PF07977 FabA-like domain MKS89_11505 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_11505 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD MKS89_11510 PF03938 Outer membrane protein (OmpH-like) MKS89_11515 PF01103 Surface antigen MKS89_11515 PF07244 Surface antigen variable number repeat MKS89_11520 PF02163 Peptidase family M50 MKS89_11520 PF17820 PDZ domain MKS89_11525 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase MKS89_11525 PF13288 DXP reductoisomerase C-terminal domain MKS89_11525 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MKS89_11535 PF01255 Putative undecaprenyl diphosphate synthase MKS89_11540 PF01765 Ribosome recycling factor MKS89_11545 PF00696 Amino acid kinase family MKS89_11550 PF00889 Elongation factor TS MKS89_11555 PF00318 Ribosomal protein S2 MKS89_11560 PF00557 Metallopeptidase family M24 MKS89_11565 PF08335 GlnD PII-uridylyltransferase MKS89_11565 PF01966 HD domain MKS89_11565 PF01909 Nucleotidyltransferase domain MKS89_11570 PF11944 Protein of unknown function (DUF3461) MKS89_11575 PF04608 Phosphatidylglycerophosphatase A MKS89_11580 PF00586 AIR synthase related protein, N-terminal domain MKS89_11580 PF02769 AIR synthase related protein, C-terminal domain MKS89_11585 PF01029 NusB family MKS89_11590 PF00885 6,7-dimethyl-8-ribityllumazine synthase MKS89_11595 PF00925 GTP cyclohydrolase II MKS89_11595 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MKS89_11600 PF00677 Lumazine binding domain MKS89_11605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKS89_11605 PF01872 RibD C-terminal domain MKS89_11610 PF03477 ATP cone domain MKS89_11615 PF00171 Aldehyde dehydrogenase family MKS89_11620 PF00696 Amino acid kinase family MKS89_11620 PF01472 PUA domain MKS89_11625 PF07417 Sigma factor-binding transcriptional regulator Crl MKS89_11630 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) MKS89_11635 PF00156 Phosphoribosyl transferase domain MKS89_11640 PF00860 Permease family MKS89_11645 PF07687 Peptidase dimerisation domain MKS89_11645 PF01546 Peptidase family M20/M25/M40 MKS89_11650 PF18030 RimK PreATP-grasp domain MKS89_11650 PF08443 RimK-like ATP-grasp domain MKS89_11655 PF18030 RimK PreATP-grasp domain MKS89_11655 PF08443 RimK-like ATP-grasp domain MKS89_11660 PF00209 Sodium:neurotransmitter symporter family MKS89_11665 PF11799 impB/mucB/samB family C-terminal domain MKS89_11665 PF11798 IMS family HHH motif MKS89_11665 PF00817 impB/mucB/samB family MKS89_11670 PF00892 EamA-like transporter family MKS89_11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_11675 PF03466 LysR substrate binding domain MKS89_11680 PF04055 Radical SAM superfamily MKS89_11690 PF00970 Oxidoreductase FAD-binding domain MKS89_11690 PF00175 Oxidoreductase NAD-binding domain MKS89_11690 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_11695 PF02508 Rnf-Nqr subunit, membrane protein MKS89_11700 PF02508 Rnf-Nqr subunit, membrane protein MKS89_11705 PF04205 FMN-binding domain MKS89_11710 PF03116 NQR2, RnfD, RnfE family MKS89_11715 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) MKS89_11715 PF11973 NQRA C-terminal domain MKS89_11720 PF01722 BolA-like protein MKS89_11725 PF05175 Methyltransferase small domain MKS89_11735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MKS89_11740 PF07690 Major Facilitator Superfamily MKS89_11745 PF02558 Ketopantoate reductase PanE/ApbA MKS89_11745 PF08546 Ketopantoate reductase PanE/ApbA C terminal MKS89_11750 PF01965 DJ-1/PfpI family MKS89_11755 PF00266 Aminotransferase class-V MKS89_11760 PF02657 Fe-S metabolism associated domain MKS89_11765 PF00899 ThiF family MKS89_11770 PF06725 3D domain MKS89_11770 PF03562 MltA specific insert domain MKS89_11775 PF00696 Amino acid kinase family MKS89_11775 PF00583 Acetyltransferase (GNAT) family MKS89_11785 PF13538 UvrD-like helicase C-terminal domain MKS89_11790 PF13361 UvrD-like helicase C-terminal domain MKS89_11790 PF12705 PD-(D/E)XK nuclease superfamily MKS89_11790 PF00580 UvrD/REP helicase N-terminal domain MKS89_11795 PF17946 RecC C-terminal domain MKS89_11805 PF07130 YebG protein MKS89_11810 PF14602 Hexapeptide repeat of succinyl-transferase MKS89_11810 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle MKS89_11815 PF00962 Adenosine/AMP deaminase MKS89_11825 PF00356 Bacterial regulatory proteins, lacI family MKS89_11830 PF00072 Response regulator receiver domain MKS89_11835 PF00501 AMP-binding enzyme MKS89_11845 PF03466 LysR substrate binding domain MKS89_11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_11850 PF00679 Elongation factor G C-terminus MKS89_11850 PF14492 Elongation Factor G, domain II MKS89_11850 PF03764 Elongation factor G, domain IV MKS89_11850 PF00009 Elongation factor Tu GTP binding domain MKS89_11850 PF03144 Elongation factor Tu domain 2 MKS89_11855 PF18073 Rubredoxin metal binding domain MKS89_11865 PF18429 Domain of unknown function (DUF5609) MKS89_11875 PF01048 Phosphorylase superfamily MKS89_11880 PF01791 DeoC/LacD family aldolase MKS89_11885 PF01773 Na+ dependent nucleoside transporter N-terminus MKS89_11885 PF07662 Na+ dependent nucleoside transporter C-terminus MKS89_11885 PF07670 Nucleoside recognition MKS89_11890 PF01026 TatD related DNase MKS89_11900 PF03883 Peroxide stress protein YaaA MKS89_11905 PF01235 Sodium:alanine symporter family MKS89_11920 PF03167 Uracil DNA glycosylase superfamily MKS89_11925 PF01261 Xylose isomerase-like TIM barrel MKS89_11930 PF01228 Glycine radical MKS89_11935 PF00291 Pyridoxal-phosphate dependent enzyme MKS89_11935 PF14821 Threonine synthase N terminus MKS89_11940 PF08544 GHMP kinases C terminal MKS89_11940 PF00288 GHMP kinases N terminal domain MKS89_11945 PF03447 Homoserine dehydrogenase, NAD binding domain MKS89_11945 PF00742 Homoserine dehydrogenase MKS89_11945 PF13840 ACT domain MKS89_11945 PF00696 Amino acid kinase family MKS89_11945 PF01842 ACT domain MKS89_11950 PF03737 Aldolase/RraA MKS89_11960 PF00072 Response regulator receiver domain MKS89_11960 PF00486 Transcriptional regulatory protein, C terminal MKS89_11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_11965 PF00512 His Kinase A (phospho-acceptor) domain MKS89_11965 PF18415 Histidine kinase receptor ArcB trans-membrane domain MKS89_11965 PF01627 Hpt domain MKS89_11965 PF00989 PAS fold MKS89_11965 PF00072 Response regulator receiver domain MKS89_11975 PF16199 Radical_SAM C-terminal domain MKS89_11975 PF04055 Radical SAM superfamily MKS89_11980 PF01493 GXGXG motif MKS89_11980 PF01645 Conserved region in glutamate synthase MKS89_11980 PF00310 Glutamine amidotransferases class-II MKS89_11980 PF04898 Glutamate synthase central domain MKS89_11985 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_11985 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MKS89_11990 PF00310 Glutamine amidotransferases class-II MKS89_11990 PF01493 GXGXG motif MKS89_11990 PF01645 Conserved region in glutamate synthase MKS89_11990 PF04898 Glutamate synthase central domain MKS89_11995 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MKS89_11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_12000 PF01048 Phosphorylase superfamily MKS89_12010 PF01497 Periplasmic binding protein MKS89_12015 PF03458 UPF0126 domain MKS89_12020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_12020 PF03466 LysR substrate binding domain MKS89_12025 PF01925 Sulfite exporter TauE/SafE MKS89_12030 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKS89_12030 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MKS89_12030 PF02142 MGS-like domain MKS89_12035 PF00117 Glutamine amidotransferase class-I MKS89_12035 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MKS89_12040 PF05173 Dihydrodipicolinate reductase, C-terminus MKS89_12040 PF01113 Dihydrodipicolinate reductase, N-terminus MKS89_12045 PF00293 NUDIX domain MKS89_12050 PF02810 SEC-C motif MKS89_12050 PF07517 SecA DEAD-like domain MKS89_12050 PF01043 SecA preprotein cross-linking domain MKS89_12050 PF07516 SecA Wing and Scaffold domain MKS89_12060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase MKS89_12065 PF12327 FtsZ family, C-terminal domain MKS89_12065 PF00091 Tubulin/FtsZ family, GTPase domain MKS89_12070 PF02491 SHS2 domain inserted in FTSA MKS89_12075 PF03799 Cell division protein FtsQ MKS89_12075 PF08478 POTRA domain, FtsQ-type MKS89_12080 PF01225 Mur ligase family, catalytic domain MKS89_12080 PF02875 Mur ligase family, glutamate ligase domain MKS89_12080 PF08245 Mur ligase middle domain MKS89_12085 PF04101 Glycosyltransferase family 28 C-terminal domain MKS89_12085 PF03033 Glycosyltransferase family 28 N-terminal domain MKS89_12090 PF01098 Cell cycle protein MKS89_12095 PF02875 Mur ligase family, glutamate ligase domain MKS89_12095 PF08245 Mur ligase middle domain MKS89_12100 PF00953 Glycosyl transferase family 4 MKS89_12100 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MKS89_12105 PF08245 Mur ligase middle domain MKS89_12105 PF01225 Mur ligase family, catalytic domain MKS89_12105 PF02875 Mur ligase family, glutamate ligase domain MKS89_12110 PF01225 Mur ligase family, catalytic domain MKS89_12110 PF02875 Mur ligase family, glutamate ligase domain MKS89_12110 PF08245 Mur ligase middle domain MKS89_12115 PF03717 Penicillin-binding Protein dimerisation domain MKS89_12115 PF00905 Penicillin binding protein transpeptidase domain MKS89_12120 PF04999 Cell division protein FtsL MKS89_12125 PF01795 MraW methylase family MKS89_12135 PF01554 MatE MKS89_12140 PF03466 LysR substrate binding domain MKS89_12140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_12145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_12145 PF00672 HAMP domain MKS89_12150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_12155 PF04348 LppC putative lipoprotein MKS89_12160 PF02021 Uncharacterised protein family UPF0102 MKS89_12165 PF13580 SIS domain MKS89_12170 PF04972 BON domain MKS89_12175 PF04386 Stringent starvation protein B MKS89_12180 PF00043 Glutathione S-transferase, C-terminal domain MKS89_12180 PF02798 Glutathione S-transferase, N-terminal domain MKS89_12185 PF00380 Ribosomal protein S9/S16 MKS89_12190 PF00572 Ribosomal protein L13 MKS89_12195 PF03969 AFG1-like ATPase MKS89_12200 PF06295 Protein of unknown function (DUF1043) MKS89_12205 PF00595 PDZ domain MKS89_12210 PF13180 PDZ domain MKS89_12215 PF01245 Ribosomal protein L19 MKS89_12220 PF01746 tRNA (Guanine-1)-methyltransferase MKS89_12225 PF01782 RimM N-terminal domain MKS89_12225 PF05239 PRC-barrel domain MKS89_12230 PF00886 Ribosomal protein S16 MKS89_12235 PF00448 SRP54-type protein, GTPase domain MKS89_12235 PF02881 SRP54-type protein, helical bundle domain MKS89_12235 PF02978 Signal peptide binding domain MKS89_12240 PF01578 Cytochrome C assembly protein MKS89_12245 PF01595 Cyclin M transmembrane N-terminal domain MKS89_12245 PF00571 CBS domain MKS89_12245 PF03471 Transporter associated domain MKS89_12250 PF02664 S-Ribosylhomocysteinase (LuxS) MKS89_12255 PF04262 Glutamate-cysteine ligase MKS89_12260 PF00675 Insulinase (Peptidase family M16) MKS89_12260 PF05193 Peptidase M16 inactive domain MKS89_12265 PF09335 SNARE associated Golgi protein MKS89_12270 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_12270 PF00107 Zinc-binding dehydrogenase MKS89_12275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit MKS89_12280 PF00682 HMGL-like MKS89_12280 PF00364 Biotin-requiring enzyme MKS89_12280 PF02436 Conserved carboxylase domain MKS89_12285 PF04277 Oxaloacetate decarboxylase, gamma chain MKS89_12320 PF02599 Global regulator protein family MKS89_12325 PF01842 ACT domain MKS89_12325 PF13840 ACT domain MKS89_12325 PF00696 Amino acid kinase family MKS89_12330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MKS89_12330 PF01411 tRNA synthetases class II (A) MKS89_12330 PF02272 DHHA1 domain MKS89_12335 PF02631 RecX family MKS89_12340 PF00154 recA bacterial DNA recombination protein MKS89_12345 PF02464 Competence-damaged protein MKS89_12350 PF09339 IclR helix-turn-helix domain MKS89_12350 PF01614 Bacterial transcriptional regulator MKS89_12360 PF07883 Cupin domain MKS89_12370 PF00294 pfkB family carbohydrate kinase MKS89_12375 PF01081 KDPG and KHG aldolase MKS89_12380 PF06917 Periplasmic pectate lyase MKS89_12390 PF03459 TOBE domain MKS89_12390 PF17912 MalK OB fold domain MKS89_12390 PF00005 ABC transporter MKS89_12395 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_12400 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_12405 PF06178 Oligogalacturonate-specific porin protein (KdgM) MKS89_12410 PF13229 Right handed beta helix region MKS89_12420 PF14583 Oligogalacturonate lyase MKS89_12425 PF01624 MutS domain I MKS89_12425 PF05192 MutS domain III MKS89_12425 PF00488 MutS domain V MKS89_12425 PF05190 MutS family domain IV MKS89_12425 PF05188 MutS domain II MKS89_12430 PF11849 Domain of unknown function (DUF3369) MKS89_12435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_12435 PF00512 His Kinase A (phospho-acceptor) domain MKS89_12435 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_12440 PF01494 FAD binding domain MKS89_12445 PF03211 Pectate lyase MKS89_12450 PF04542 Sigma-70 region 2 MKS89_12450 PF04539 Sigma-70 region 3 MKS89_12450 PF04545 Sigma-70, region 4 MKS89_12450 PF00140 Sigma-70 factor, region 1.2 MKS89_12455 PF01476 LysM domain MKS89_12455 PF01551 Peptidase family M23 MKS89_12465 PF01975 Survival protein SurE MKS89_12470 PF01142 tRNA pseudouridine synthase D (TruD) MKS89_12475 PF02542 YgbB family MKS89_12480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MKS89_12485 PF04977 Septum formation initiator MKS89_12490 PF02673 Bacitracin resistance protein BacA MKS89_12495 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MKS89_12500 PF02152 Dihydroneopterin aldolase MKS89_12505 PF02660 Glycerol-3-phosphate acyltransferase MKS89_12510 PF00561 alpha/beta hydrolase fold MKS89_12515 PF00814 Glycoprotease family MKS89_12520 PF01165 Ribosomal protein S21 MKS89_12525 PF09424 Yqey-like protein MKS89_12530 PF01807 CHC2 zinc finger MKS89_12530 PF08275 DNA primase catalytic core, N-terminal domain MKS89_12530 PF08278 DNA primase DnaG DnaB-binding MKS89_12530 PF10410 DnaB-helicase binding domain of primase MKS89_12535 PF04542 Sigma-70 region 2 MKS89_12535 PF04546 Sigma-70, non-essential region MKS89_12535 PF04539 Sigma-70 region 3 MKS89_12535 PF03979 Sigma-70 factor, region 1.1 MKS89_12535 PF00140 Sigma-70 factor, region 1.2 MKS89_12535 PF04545 Sigma-70, region 4 MKS89_12565 PF05840 Bacteriophage replication gene A protein (GPA) MKS89_12575 PF05840 Bacteriophage replication gene A protein (GPA) MKS89_12585 PF01740 STAS domain MKS89_12585 PF00916 Sulfate permease family MKS89_12595 PF00753 Metallo-beta-lactamase superfamily MKS89_12600 PF00578 AhpC/TSA family MKS89_12600 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKS89_12625 PF00884 Sulfatase MKS89_12640 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_12640 PF00107 Zinc-binding dehydrogenase MKS89_12690 PF00550 Phosphopantetheine attachment site MKS89_12690 PF00975 Thioesterase domain MKS89_12690 PF13193 AMP-binding enzyme C-terminal domain MKS89_12690 PF00501 AMP-binding enzyme MKS89_12690 PF00668 Condensation domain MKS89_12695 PF00698 Acyl transferase domain MKS89_12695 PF00668 Condensation domain MKS89_12695 PF16197 Ketoacyl-synthetase C-terminal extension MKS89_12695 PF00109 Beta-ketoacyl synthase, N-terminal domain MKS89_12695 PF02801 Beta-ketoacyl synthase, C-terminal domain MKS89_12695 PF00550 Phosphopantetheine attachment site MKS89_12815 PF02954 Bacterial regulatory protein, Fis family MKS89_12815 PF00072 Response regulator receiver domain MKS89_12815 PF00158 Sigma-54 interaction domain MKS89_12820 PF02378 Phosphotransferase system, EIIC MKS89_12820 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_12820 PF00367 phosphotransferase system, EIIB MKS89_12825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_12825 PF00672 HAMP domain MKS89_12830 PF00884 Sulfatase MKS89_12830 PF16347 Domain of unknown function (DUF4976) MKS89_12840 PF13186 Iron-sulfur cluster-binding domain MKS89_12840 PF04055 Radical SAM superfamily MKS89_12845 PF00884 Sulfatase MKS89_12855 PF16385 Domain of unknown function MKS89_12855 PF00884 Sulfatase MKS89_12860 PF13186 Iron-sulfur cluster-binding domain MKS89_12860 PF04055 Radical SAM superfamily MKS89_12865 PF02656 Domain of unknown function (DUF202) MKS89_12870 PF01380 SIS domain MKS89_12870 PF01418 Helix-turn-helix domain, rpiR family MKS89_12885 PF02378 Phosphotransferase system, EIIC MKS89_12885 PF00367 phosphotransferase system, EIIB MKS89_12885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_12890 PF00672 HAMP domain MKS89_12890 PF02203 Tar ligand binding domain homologue MKS89_12890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_12900 PF00313 'Cold-shock' DNA-binding domain MKS89_12920 PF06445 GyrI-like small molecule binding domain MKS89_12990 PF01380 SIS domain MKS89_12995 PF00455 DeoR C terminal sensor domain MKS89_12995 PF08220 DeoR-like helix-turn-helix domain MKS89_13000 PF00224 Pyruvate kinase, barrel domain MKS89_13000 PF02887 Pyruvate kinase, alpha/beta domain MKS89_13005 PF04402 Protein of unknown function (DUF541) MKS89_13010 PF05552 Conserved TM helix MKS89_13010 PF00924 Mechanosensitive ion channel MKS89_13015 PF01116 Fructose-bisphosphate aldolase class-II MKS89_13020 PF00162 Phosphoglycerate kinase MKS89_13025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKS89_13025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKS89_13030 PF02779 Transketolase, pyrimidine binding domain MKS89_13030 PF02780 Transketolase, C-terminal domain MKS89_13030 PF00456 Transketolase, thiamine diphosphate binding domain MKS89_13035 PF02773 S-adenosylmethionine synthetase, C-terminal domain MKS89_13035 PF02772 S-adenosylmethionine synthetase, central domain MKS89_13035 PF00438 S-adenosylmethionine synthetase, N-terminal domain MKS89_13040 PF10263 SprT-like family MKS89_13040 PF17283 SprT-like zinc ribbon domain MKS89_13045 PF04452 RNA methyltransferase MKS89_13050 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain MKS89_13050 PF02951 Prokaryotic glutathione synthetase, N-terminal domain MKS89_13055 PF02622 Uncharacterized ACR, COG1678 MKS89_13060 PF03652 Holliday junction resolvase MKS89_13065 PF00437 Type II/IV secretion system protein MKS89_13070 PF01168 Alanine racemase, N-terminal domain MKS89_13075 PF03807 NADP oxidoreductase coenzyme F420-dependent MKS89_13075 PF14748 Pyrroline-5-carboxylate reductase dimerisation MKS89_13080 PF02325 YGGT family MKS89_13085 PF02594 Uncharacterised ACR, YggU family COG1872 MKS89_13090 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MKS89_13095 PF00072 Response regulator receiver domain MKS89_13100 PF00072 Response regulator receiver domain MKS89_13100 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKS89_13100 PF00512 His Kinase A (phospho-acceptor) domain MKS89_13100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_13100 PF00672 HAMP domain MKS89_13100 PF01627 Hpt domain MKS89_13120 PF01740 STAS domain MKS89_13120 PF08678 Rsbr N terminal MKS89_13130 PF08212 Lipocalin-like domain MKS89_13165 PF05593 RHS Repeat MKS89_13165 PF03527 RHS protein MKS89_13205 PF03527 RHS protein MKS89_13205 PF05593 RHS Repeat MKS89_13240 PF04717 Type VI secretion system, phage-baseplate injector MKS89_13245 PF01725 Ham1 family MKS89_13250 PF06969 HemN C-terminal domain MKS89_13250 PF04055 Radical SAM superfamily MKS89_13255 PF04960 Glutaminase MKS89_13260 PF02390 Putative methyltransferase MKS89_13265 PF00633 Helix-hairpin-helix motif MKS89_13265 PF14815 NUDIX domain MKS89_13265 PF00730 HhH-GPD superfamily base excision DNA repair protein MKS89_13270 PF04362 Bacterial Fe(2+) trafficking MKS89_13275 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain MKS89_13275 PF01464 Transglycosylase SLT domain MKS89_13325 PF05099 Tellurite resistance protein TerB MKS89_13325 PF00226 DnaJ domain MKS89_13330 PF03968 OstA-like protein MKS89_13330 PF04453 LPS transport system D MKS89_13335 PF09312 SurA N-terminal domain MKS89_13340 PF04166 Pyridoxal phosphate biosynthetic protein PdxA MKS89_13345 PF00398 Ribosomal RNA adenine dimethylase MKS89_13350 PF04379 ApaG domain MKS89_13355 PF00149 Calcineurin-like phosphoesterase MKS89_13360 PF00186 Dihydrofolate reductase MKS89_13365 PF06738 Putative threonine/serine exporter MKS89_13365 PF12821 Threonine/Serine exporter, ThrE MKS89_13370 PF06738 Putative threonine/serine exporter MKS89_13375 PF01018 GTP1/OBG MKS89_13375 PF01926 50S ribosome-binding GTPase MKS89_13380 PF01016 Ribosomal L27 protein MKS89_13385 PF00829 Ribosomal prokaryotic L21 protein MKS89_13390 PF00348 Polyprenyl synthetase MKS89_13395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MKS89_13395 PF00056 lactate/malate dehydrogenase, NAD binding domain MKS89_13400 PF01316 Arginine repressor, DNA binding domain MKS89_13400 PF02863 Arginine repressor, C-terminal domain MKS89_13405 PF16868 NMT1-like family MKS89_13415 PF00582 Universal stress protein family MKS89_13425 PF03786 D-mannonate dehydratase (UxuA) MKS89_13430 PF07729 FCD domain MKS89_13430 PF00392 Bacterial regulatory proteins, gntR family MKS89_13435 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_13440 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component MKS89_13445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_13450 PF17137 Domain of unknown function (DUF5110) MKS89_13450 PF13802 Galactose mutarotase-like MKS89_13450 PF01055 Glycosyl hydrolases family 31 MKS89_13450 PF16338 Domain of unknown function (DUF4968) MKS89_13455 PF08125 Mannitol dehydrogenase C-terminal domain MKS89_13455 PF01232 Mannitol dehydrogenase Rossmann domain MKS89_13460 PF02614 Glucuronate isomerase MKS89_13465 PF00294 pfkB family carbohydrate kinase MKS89_13470 PF01081 KDPG and KHG aldolase MKS89_13475 PF00733 Asparagine synthase MKS89_13475 PF09147 Domain of unknown function (DUF1933) MKS89_13480 PF00378 Enoyl-CoA hydratase/isomerase MKS89_13485 PF02668 Taurine catabolism dioxygenase TauD, TfdA family MKS89_13490 PF01619 Proline dehydrogenase MKS89_13495 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_13505 PF00892 EamA-like transporter family MKS89_13515 PF01047 MarR family MKS89_13515 PF00480 ROK family MKS89_13520 PF01869 BadF/BadG/BcrA/BcrD ATPase family MKS89_13535 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_13540 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_13555 PF00005 ABC transporter MKS89_13555 PF17912 MalK OB fold domain MKS89_13560 PF06877 Regulator of ribonuclease activity B MKS89_13565 PF01523 Putative modulator of DNA gyrase MKS89_13570 PF00795 Carbon-nitrogen hydrolase MKS89_13575 PF13502 AsmA-like C-terminal region MKS89_13575 PF13116 Protein of unknown function MKS89_13580 PF10150 Ribonuclease E/G family MKS89_13580 PF00575 S1 RNA binding domain MKS89_13585 PF02545 Maf-like protein MKS89_13590 PF04093 rod shape-determining protein MreD MKS89_13595 PF04085 rod shape-determining protein MreC MKS89_13605 PF00990 Diguanylate cyclase, GGDEF domain MKS89_13605 PF00563 EAL domain MKS89_13605 PF17157 Gammaproteobacterial periplasmic sensor domain MKS89_13610 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKS89_13620 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA MKS89_13625 PF00586 AIR synthase related protein, N-terminal domain MKS89_13625 PF02769 AIR synthase related protein, C-terminal domain MKS89_13630 PF01924 Hydrogenase formation hypA family MKS89_13635 PF01455 HupF/HypC family MKS89_13640 PF00708 Acylphosphatase MKS89_13640 PF17788 HypF Kae1-like domain MKS89_13640 PF01300 Telomere recombination MKS89_13640 PF07503 HypF finger MKS89_13650 PF02634 FdhD/NarQ family MKS89_13655 PF01590 GAF domain MKS89_13655 PF02954 Bacterial regulatory protein, Fis family MKS89_13655 PF00158 Sigma-54 interaction domain MKS89_13660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKS89_13660 PF00384 Molybdopterin oxidoreductase MKS89_13660 PF01568 Molydopterin dinucleotide binding domain MKS89_13665 PF12800 4Fe-4S binding domain MKS89_13665 PF13247 4Fe-4S dicluster domain MKS89_13670 PF01750 Hydrogenase maturation protease MKS89_13675 PF07450 Formate hydrogenlyase maturation protein HycH MKS89_13680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MKS89_13685 PF12838 4Fe-4S dicluster domain MKS89_13690 PF00374 Nickel-dependent hydrogenase MKS89_13690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MKS89_13690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MKS89_13695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKS89_13695 PF00361 Proton-conducting membrane transporter MKS89_13700 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MKS89_13705 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKS89_13705 PF00361 Proton-conducting membrane transporter MKS89_13710 PF00146 NADH dehydrogenase MKS89_13715 PF00361 Proton-conducting membrane transporter MKS89_13720 PF00037 4Fe-4S binding domain MKS89_13720 PF12798 4Fe-4S binding domain MKS89_13725 PF00696 Amino acid kinase family MKS89_13725 PF01842 ACT domain MKS89_13730 PF00266 Aminotransferase class-V MKS89_13740 PF00005 ABC transporter MKS89_13740 PF17755 UvrA DNA-binding domain MKS89_13740 PF17760 UvrA interaction domain MKS89_13745 PF00483 Nucleotidyl transferase MKS89_13750 PF00196 Bacterial regulatory proteins, luxR family MKS89_13755 PF00436 Single-strand binding protein family MKS89_13760 PF00809 Pterin binding enzyme MKS89_13760 PF02965 Vitamin B12 dependent methionine synthase, activation domain MKS89_13760 PF02574 Homocysteine S-methyltransferase MKS89_13760 PF02310 B12 binding domain MKS89_13760 PF02607 B12 binding domain MKS89_13765 PF00999 Sodium/hydrogen exchanger family MKS89_13810 PF01507 Phosphoadenosine phosphosulfate reductase family MKS89_13815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKS89_13815 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKS89_13820 PF00175 Oxidoreductase NAD-binding domain MKS89_13820 PF00258 Flavodoxin MKS89_13820 PF00667 FAD binding domain MKS89_13835 PF01207 Dihydrouridine synthase (Dus) MKS89_13860 PF00664 ABC transporter transmembrane region MKS89_13860 PF00005 ABC transporter MKS89_13865 PF00550 Phosphopantetheine attachment site MKS89_13865 PF00501 AMP-binding enzyme MKS89_13865 PF13193 AMP-binding enzyme C-terminal domain MKS89_13865 PF00668 Condensation domain MKS89_13865 PF07993 Male sterility protein MKS89_13870 PF00550 Phosphopantetheine attachment site MKS89_13870 PF00668 Condensation domain MKS89_13870 PF00975 Thioesterase domain MKS89_13870 PF00501 AMP-binding enzyme MKS89_13870 PF13193 AMP-binding enzyme C-terminal domain MKS89_13875 PF00975 Thioesterase domain MKS89_13875 PF00550 Phosphopantetheine attachment site MKS89_13875 PF00668 Condensation domain MKS89_13875 PF13193 AMP-binding enzyme C-terminal domain MKS89_13875 PF00501 AMP-binding enzyme MKS89_13880 PF01475 Ferric uptake regulator family MKS89_13890 PF00342 Phosphoglucose isomerase MKS89_13895 PF01894 Uncharacterised protein family UPF0047 MKS89_13900 PF00772 DnaB-like helicase N terminal domain MKS89_13900 PF03796 DnaB-like helicase C terminal domain MKS89_13910 PF03948 Ribosomal protein L9, C-terminal domain MKS89_13910 PF01281 Ribosomal protein L9, N-terminal domain MKS89_13915 PF01084 Ribosomal protein S18 MKS89_13920 PF00436 Single-strand binding protein family MKS89_13925 PF01250 Ribosomal protein S6 MKS89_13930 PF00210 Ferritin-like domain MKS89_13935 PF04324 BFD-like [2Fe-2S] binding domain MKS89_13940 PF00009 Elongation factor Tu GTP binding domain MKS89_13940 PF03144 Elongation factor Tu domain 2 MKS89_13940 PF03143 Elongation factor Tu C-terminal domain MKS89_13945 PF00679 Elongation factor G C-terminus MKS89_13945 PF03144 Elongation factor Tu domain 2 MKS89_13945 PF00009 Elongation factor Tu GTP binding domain MKS89_13945 PF03764 Elongation factor G, domain IV MKS89_13945 PF14492 Elongation Factor G, domain II MKS89_13950 PF00177 Ribosomal protein S7p/S5e MKS89_13955 PF00164 Ribosomal protein S12/S23 MKS89_13965 PF02635 DsrE/DsrF-like family MKS89_13970 PF02635 DsrE/DsrF-like family MKS89_13975 PF08348 YheO-like PAS domain MKS89_13975 PF13309 HTH domain MKS89_13980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MKS89_13980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKS89_13990 PF04102 SlyX MKS89_13995 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) MKS89_14000 PF01145 SPFH domain / Band 7 family MKS89_14005 PF01145 SPFH domain / Band 7 family MKS89_14005 PF12221 Bacterial membrane protein N terminal MKS89_14010 PF01926 50S ribosome-binding GTPase MKS89_14010 PF13167 GTP-binding GTPase N-terminal MKS89_14010 PF16360 GTP-binding GTPase Middle Region MKS89_14015 PF17209 Hfq protein MKS89_14025 PF01119 DNA mismatch repair protein, C-terminal domain MKS89_14025 PF08676 MutL C terminal dimerisation domain MKS89_14030 PF01520 N-acetylmuramoyl-L-alanine amidase MKS89_14035 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MKS89_14040 PF08331 Domain of unknown function (DUF1730) MKS89_14070 PF00929 Exonuclease MKS89_14075 PF03193 RsgA GTPase MKS89_14080 PF02666 Phosphatidylserine decarboxylase MKS89_14085 PF00939 Sodium:sulfate symporter transmembrane region MKS89_14095 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MKS89_14095 PF01676 Metalloenzyme superfamily MKS89_14100 PF01551 Peptidase family M23 MKS89_14105 PF08360 QacR-like protein, C-terminal region MKS89_14105 PF00440 Bacterial regulatory proteins, tetR family MKS89_14110 PF01208 Uroporphyrinogen decarboxylase (URO-D) MKS89_14115 PF09297 NADH pyrophosphatase zinc ribbon domain MKS89_14115 PF00293 NUDIX domain MKS89_14120 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ MKS89_14125 PF04998 RNA polymerase Rpb1, domain 5 MKS89_14125 PF04983 RNA polymerase Rpb1, domain 3 MKS89_14125 PF00623 RNA polymerase Rpb1, domain 2 MKS89_14125 PF05000 RNA polymerase Rpb1, domain 4 MKS89_14125 PF04997 RNA polymerase Rpb1, domain 1 MKS89_14130 PF04560 RNA polymerase Rpb2, domain 7 MKS89_14130 PF04563 RNA polymerase beta subunit MKS89_14130 PF04561 RNA polymerase Rpb2, domain 2 MKS89_14130 PF04565 RNA polymerase Rpb2, domain 3 MKS89_14130 PF10385 RNA polymerase beta subunit external 1 domain MKS89_14130 PF00562 RNA polymerase Rpb2, domain 6 MKS89_14135 PF00542 Ribosomal protein L7/L12 C-terminal domain MKS89_14135 PF16320 Ribosomal protein L7/L12 dimerisation domain MKS89_14140 PF00466 Ribosomal protein L10 MKS89_14145 PF00687 Ribosomal protein L1p/L10e family MKS89_14150 PF00298 Ribosomal protein L11, RNA binding domain MKS89_14150 PF03946 Ribosomal protein L11, N-terminal domain MKS89_14155 PF00467 KOW motif MKS89_14155 PF02357 Transcription termination factor nusG MKS89_14160 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MKS89_14165 PF03143 Elongation factor Tu C-terminal domain MKS89_14165 PF03144 Elongation factor Tu domain 2 MKS89_14165 PF00009 Elongation factor Tu GTP binding domain MKS89_14190 PF00485 Phosphoribulokinase / Uridine kinase family MKS89_14195 PF08279 HTH domain MKS89_14195 PF03099 Biotin/lipoate A/B protein ligase family MKS89_14195 PF02237 Biotin protein ligase C terminal domain MKS89_14200 PF01565 FAD binding domain MKS89_14200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MKS89_14210 PF13091 PLD-like domain MKS89_14215 PF00175 Oxidoreductase NAD-binding domain MKS89_14220 PF00970 Oxidoreductase FAD-binding domain MKS89_14220 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_14220 PF00175 Oxidoreductase NAD-binding domain MKS89_14225 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MKS89_14235 PF07497 Rho termination factor, RNA-binding domain MKS89_14235 PF07498 Rho termination factor, N-terminal domain MKS89_14235 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKS89_14240 PF00085 Thioredoxin MKS89_14245 PF00270 DEAD/DEAH box helicase MKS89_14245 PF00271 Helicase conserved C-terminal domain MKS89_14250 PF02541 Ppx/GppA phosphatase family MKS89_14255 PF00672 HAMP domain MKS89_14255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_14255 PF01627 Hpt domain MKS89_14255 PF00072 Response regulator receiver domain MKS89_14255 PF00512 His Kinase A (phospho-acceptor) domain MKS89_14260 PF07702 UTRA domain MKS89_14260 PF00392 Bacterial regulatory proteins, gntR family MKS89_14265 PF02378 Phosphotransferase system, EIIC MKS89_14265 PF00367 phosphotransferase system, EIIB MKS89_14270 PF02056 Family 4 glycosyl hydrolase MKS89_14270 PF11975 Family 4 glycosyl hydrolase C-terminal domain MKS89_14275 PF12832 MFS_1 like family MKS89_14290 PF16177 Acetyl-coenzyme A synthetase N-terminus MKS89_14290 PF00501 AMP-binding enzyme MKS89_14290 PF13193 AMP-binding enzyme C-terminal domain MKS89_14295 PF01220 Dehydroquinase class II MKS89_14300 PF00364 Biotin-requiring enzyme MKS89_14305 PF00289 Biotin carboxylase, N-terminal domain MKS89_14305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKS89_14305 PF02785 Biotin carboxylase C-terminal domain MKS89_14315 PF01207 Dihydrouridine synthase (Dus) MKS89_14320 PF02954 Bacterial regulatory protein, Fis family MKS89_14350 PF03466 LysR substrate binding domain MKS89_14350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_14355 PF01638 HxlR-like helix-turn-helix MKS89_14360 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) MKS89_14365 PF00361 Proton-conducting membrane transporter MKS89_14365 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus MKS89_14365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKS89_14370 PF03466 LysR substrate binding domain MKS89_14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_14375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_14375 PF00672 HAMP domain MKS89_14375 PF17200 Single Cache domain 2 MKS89_14380 PF01238 Phosphomannose isomerase type I MKS89_14385 PF01808 AICARFT/IMPCHase bienzyme MKS89_14385 PF02142 MGS-like domain MKS89_14390 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MKS89_14390 PF02843 Phosphoribosylglycinamide synthetase, C domain MKS89_14390 PF02844 Phosphoribosylglycinamide synthetase, N domain MKS89_14395 PF17200 Single Cache domain 2 MKS89_14395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_14395 PF00672 HAMP domain MKS89_14400 PF03449 Transcription elongation factor, N-terminal MKS89_14400 PF01272 Transcription elongation factor, GreA/GreB, C-term MKS89_14405 PF17674 HHH domain MKS89_14405 PF00575 S1 RNA binding domain MKS89_14405 PF09371 Tex-like protein N-terminal domain MKS89_14405 PF16921 Tex protein YqgF-like domain MKS89_14415 PF00561 alpha/beta hydrolase fold MKS89_14420 PF00156 Phosphoribosyl transferase domain MKS89_14425 PF01521 Iron-sulphur cluster biosynthesis MKS89_14425 PF01106 NifU-like domain MKS89_14430 PF00293 NUDIX domain MKS89_14435 PF00459 Inositol monophosphatase family MKS89_14440 PF01203 Type II secretion system (T2SS), protein N MKS89_14445 PF04612 Type II secretion system (T2SS), protein M MKS89_14450 PF12693 GspL periplasmic domain MKS89_14450 PF05134 Type II secretion system (T2SS), protein L MKS89_14455 PF03934 Type II secretion system (T2SS), protein K MKS89_14460 PF07963 Prokaryotic N-terminal methylation motif MKS89_14460 PF11612 Type II secretion system (T2SS), protein J MKS89_14465 PF07963 Prokaryotic N-terminal methylation motif MKS89_14465 PF02501 Type II secretion system (T2SS), protein I MKS89_14470 PF12019 Type II transport protein GspH MKS89_14475 PF08334 Type II secretion system (T2SS), protein G MKS89_14475 PF07963 Prokaryotic N-terminal methylation motif MKS89_14480 PF00482 Type II secretion system (T2SS), protein F MKS89_14485 PF00437 Type II/IV secretion system protein MKS89_14490 PF00263 Bacterial type II and III secretion system protein MKS89_14490 PF03958 Bacterial type II/III secretion system short domain MKS89_14495 PF11356 Type II secretion system protein C MKS89_14500 PF01479 S4 domain MKS89_14505 PF01430 Hsp33 protein MKS89_14510 PF01293 Phosphoenolpyruvate carboxykinase MKS89_14520 PF09500 Putative thioesterase (yiiD_Cterm) MKS89_14520 PF00583 Acetyltransferase (GNAT) family MKS89_14525 PF02580 D-Tyr-tRNA(Tyr) deacylase MKS89_14530 PF03631 Virulence factor BrkB MKS89_14535 PF00009 Elongation factor Tu GTP binding domain MKS89_14535 PF00679 Elongation factor G C-terminus MKS89_14535 PF03144 Elongation factor Tu domain 2 MKS89_14540 PF00120 Glutamine synthetase, catalytic domain MKS89_14540 PF03951 Glutamine synthetase, beta-Grasp domain MKS89_14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_14545 PF00989 PAS fold MKS89_14545 PF00512 His Kinase A (phospho-acceptor) domain MKS89_14550 PF02954 Bacterial regulatory protein, Fis family MKS89_14550 PF00072 Response regulator receiver domain MKS89_14550 PF00158 Sigma-54 interaction domain MKS89_14615 PF01177 Asp/Glu/Hydantoin racemase MKS89_14620 PF00593 TonB dependent receptor MKS89_14620 PF07715 TonB-dependent Receptor Plug Domain MKS89_14625 PF05958 tRNA (Uracil-5-)-methyltransferase MKS89_14630 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal MKS89_14630 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal MKS89_14635 PF01321 Creatinase/Prolidase N-terminal domain MKS89_14635 PF00557 Metallopeptidase family M24 MKS89_14640 PF00291 Pyridoxal-phosphate dependent enzyme MKS89_14645 PF01180 Dihydroorotate dehydrogenase MKS89_14650 PF00156 Phosphoribosyl transferase domain MKS89_14660 PF03641 Possible lysine decarboxylase MKS89_14665 PF00293 NUDIX domain MKS89_14665 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain MKS89_14665 PF09297 NADH pyrophosphatase zinc ribbon domain MKS89_14670 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKS89_14670 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKS89_14685 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKS89_14685 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKS89_14690 PF00950 ABC 3 transport family MKS89_14695 PF00005 ABC transporter MKS89_14700 PF01297 Zinc-uptake complex component A periplasmic MKS89_14705 PF00664 ABC transporter transmembrane region MKS89_14705 PF08021 Siderophore-interacting FAD-binding domain MKS89_14705 PF04954 Siderophore-interacting protein MKS89_14705 PF00005 ABC transporter MKS89_14710 PF00664 ABC transporter transmembrane region MKS89_14710 PF00005 ABC transporter MKS89_14715 PF00440 Bacterial regulatory proteins, tetR family MKS89_14720 PF05638 Type VI secretion system effector, Hcp MKS89_14725 PF04717 Type VI secretion system, phage-baseplate injector MKS89_14785 PF00367 phosphotransferase system, EIIB MKS89_14785 PF02378 Phosphotransferase system, EIIC MKS89_14790 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_14800 PF01116 Fructose-bisphosphate aldolase class-II MKS89_14805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MKS89_14805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MKS89_14810 PF00294 pfkB family carbohydrate kinase MKS89_14815 PF00455 DeoR C terminal sensor domain MKS89_14815 PF08220 DeoR-like helix-turn-helix domain MKS89_14820 PF01263 Aldose 1-epimerase MKS89_14830 PF00465 Iron-containing alcohol dehydrogenase MKS89_14835 PF02733 Dak1 domain MKS89_14835 PF02734 DAK2 domain MKS89_14840 PF01055 Glycosyl hydrolases family 31 MKS89_14845 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_14850 PF03466 LysR substrate binding domain MKS89_14850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_14860 PF00440 Bacterial regulatory proteins, tetR family MKS89_14865 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_14865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKS89_14870 PF04072 Leucine carboxyl methyltransferase MKS89_14875 PF01726 LexA DNA binding domain MKS89_14875 PF00717 Peptidase S24-like MKS89_14880 PF01219 Prokaryotic diacylglycerol kinase MKS89_14885 PF01553 Acyltransferase MKS89_14890 PF01040 UbiA prenyltransferase family MKS89_14895 PF04345 Chorismate lyase MKS89_14905 PF01694 Rhomboid family MKS89_14905 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease MKS89_14910 PF00581 Rhodanese-like domain MKS89_14915 PF00140 Sigma-70 factor, region 1.2 MKS89_14915 PF04542 Sigma-70 region 2 MKS89_14915 PF04545 Sigma-70, region 4 MKS89_14920 PF18075 FtsX extracellular domain MKS89_14925 PF00005 ABC transporter MKS89_14930 PF00448 SRP54-type protein, GTPase domain MKS89_14930 PF02881 SRP54-type protein, helical bundle domain MKS89_14940 PF01914 MarC family integral membrane protein MKS89_14960 PF00210 Ferritin-like domain MKS89_14965 PF00563 EAL domain MKS89_14965 PF08668 HDOD domain MKS89_14970 PF01810 LysE type translocator MKS89_14975 PF12146 Serine aminopeptidase, S33 MKS89_14985 PF00550 Phosphopantetheine attachment site MKS89_14985 PF00668 Condensation domain MKS89_14985 PF13193 AMP-binding enzyme C-terminal domain MKS89_14985 PF00501 AMP-binding enzyme MKS89_14995 PF17837 4'-phosphopantetheinyl transferase N-terminal domain MKS89_14995 PF01648 4'-phosphopantetheinyl transferase superfamily MKS89_15010 PF03942 DTW domain MKS89_15015 PF13419 Haloacid dehalogenase-like hydrolase MKS89_15020 PF02899 Phage integrase, N-terminal SAM-like domain MKS89_15020 PF00589 Phage integrase family MKS89_15030 PF01678 Diaminopimelate epimerase MKS89_15035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKS89_15035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKS89_15045 PF01491 Frataxin-like domain MKS89_15050 PF12633 Adenylate cyclase NT domain MKS89_15050 PF01295 Adenylate cyclase, class-I MKS89_15055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MKS89_15055 PF03900 Porphobilinogen deaminase, C-terminal domain MKS89_15060 PF02602 Uroporphyrinogen-III synthase HemD MKS89_15065 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase MKS89_15070 PF07719 Tetratricopeptide repeat MKS89_15070 PF07219 HemY protein N-terminus MKS89_15075 PF06969 HemN C-terminal domain MKS89_15075 PF04055 Radical SAM superfamily MKS89_15080 PF10675 Protein of unknown function (DUF2489) MKS89_15085 PF04220 Der GTPase activator (YihI) MKS89_15100 PF01926 50S ribosome-binding GTPase MKS89_15105 PF01367 5'-3' exonuclease, C-terminal SAM fold MKS89_15105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MKS89_15105 PF00476 DNA polymerase family A MKS89_15105 PF01612 3'-5' exonuclease MKS89_15110 PF00490 Delta-aminolevulinic acid dehydratase MKS89_15115 PF01026 TatD related DNase MKS89_15120 PF00902 Sec-independent protein translocase protein (TatC) MKS89_15125 PF02416 mttA/Hcf106 family MKS89_15135 PF03109 ABC1 family MKS89_15140 PF02036 SCP-2 sterol transfer family MKS89_15145 PF01209 ubiE/COQ5 methyltransferase family MKS89_15150 PF02646 RmuC family MKS89_15165 PF12833 Helix-turn-helix domain MKS89_15165 PF02311 AraC-like ligand binding domain MKS89_15175 PF11762 L-arabinose isomerase C-terminal domain MKS89_15175 PF02610 L-arabinose isomerase MKS89_15180 PF00596 Class II Aldolase and Adducin N-terminal domain MKS89_15185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKS89_15185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKS89_15190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKS89_15195 PF00005 ABC transporter MKS89_15200 PF02653 Branched-chain amino acid transport system / permease component MKS89_15220 PF03992 Antibiotic biosynthesis monooxygenase MKS89_15225 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_15230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_15230 PF03466 LysR substrate binding domain MKS89_15245 PF00668 Condensation domain MKS89_15245 PF13193 AMP-binding enzyme C-terminal domain MKS89_15245 PF00550 Phosphopantetheine attachment site MKS89_15245 PF00501 AMP-binding enzyme MKS89_15245 PF00975 Thioesterase domain MKS89_15250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKS89_15250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKS89_15255 PF14489 QueF-like protein MKS89_15255 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term MKS89_15280 PF01878 EVE domain MKS89_15290 PF08279 HTH domain MKS89_15290 PF13280 WYL domain MKS89_15295 PF13460 NAD(P)H-binding MKS89_15305 PF00392 Bacterial regulatory proteins, gntR family MKS89_15305 PF07702 UTRA domain MKS89_15310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKS89_15310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKS89_15315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_15315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_15320 PF00596 Class II Aldolase and Adducin N-terminal domain MKS89_15330 PF07663 Sorbitol phosphotransferase enzyme II C-terminus MKS89_15330 PF03612 Sorbitol phosphotransferase enzyme II N-terminus MKS89_15340 PF10625 Universal stress protein B (UspB) MKS89_15345 PF00210 Ferritin-like domain MKS89_15350 PF00582 Universal stress protein family MKS89_15355 PF00892 EamA-like transporter family MKS89_15365 PF04445 Putative SAM-dependent methyltransferase MKS89_15370 PF01037 Lrp/AsnC ligand binding domain MKS89_15380 PF01321 Creatinase/Prolidase N-terminal domain MKS89_15380 PF00557 Metallopeptidase family M24 MKS89_15385 PF13977 BetI-type transcriptional repressor, C-terminal MKS89_15385 PF00440 Bacterial regulatory proteins, tetR family MKS89_15390 PF00171 Aldehyde dehydrogenase family MKS89_15395 PF05199 GMC oxidoreductase MKS89_15395 PF00732 GMC oxidoreductase MKS89_15400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MKS89_15405 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_15410 PF00005 ABC transporter MKS89_15410 PF00571 CBS domain MKS89_15415 PF06968 Biotin and Thiamin Synthesis associated domain MKS89_15415 PF04055 Radical SAM superfamily MKS89_15420 PF05690 Thiazole biosynthesis protein ThiG MKS89_15425 PF02597 ThiS family MKS89_15430 PF00899 ThiF family MKS89_15435 PF02581 Thiamine monophosphate synthase MKS89_15440 PF13667 ThiC-associated domain MKS89_15440 PF01964 Radical SAM ThiC family MKS89_15445 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MKS89_15450 PF04616 Glycosyl hydrolases family 43 MKS89_15450 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain MKS89_15500 PF12724 Flavodoxin domain MKS89_15505 PF02386 Cation transport protein MKS89_15510 PF09186 Domain of unknown function (DUF1949) MKS89_15510 PF01205 Uncharacterized protein family UPF0029 MKS89_15515 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MKS89_15515 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MKS89_15515 PF00378 Enoyl-CoA hydratase/isomerase MKS89_15520 PF02803 Thiolase, C-terminal domain MKS89_15520 PF00108 Thiolase, N-terminal domain MKS89_15525 PF00132 Bacterial transferase hexapeptide (six repeats) MKS89_15525 PF12804 MobA-like NTP transferase domain MKS89_15530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MKS89_15530 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MKS89_15535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKS89_15535 PF02874 ATP synthase alpha/beta family, beta-barrel domain MKS89_15540 PF00231 ATP synthase MKS89_15545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKS89_15545 PF00306 ATP synthase alpha/beta chain, C terminal domain MKS89_15545 PF02874 ATP synthase alpha/beta family, beta-barrel domain MKS89_15550 PF00213 ATP synthase delta (OSCP) subunit MKS89_15555 PF00430 ATP synthase B/B' CF(0) MKS89_15560 PF00137 ATP synthase subunit C MKS89_15565 PF00119 ATP synthase A chain MKS89_15575 PF17762 HTH domain found in ParB protein MKS89_15575 PF02195 ParB-like nuclease domain MKS89_15580 PF13614 AAA domain MKS89_15585 PF02527 rRNA small subunit methyltransferase G MKS89_15590 PF01134 Glucose inhibited division protein A MKS89_15590 PF13932 GidA associated domain MKS89_15595 PF00258 Flavodoxin MKS89_15605 PF01420 Type I restriction modification DNA specificity domain MKS89_15610 PF02384 N-6 DNA Methylase MKS89_15610 PF12161 HsdM N-terminal domain MKS89_15625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_15625 PF03466 LysR substrate binding domain MKS89_15640 PF01926 50S ribosome-binding GTPase MKS89_15640 PF12631 MnmE helical domain MKS89_15640 PF10396 GTP-binding protein TrmE N-terminus MKS89_15645 PF02096 60Kd inner membrane protein MKS89_15645 PF14849 YidC periplasmic domain MKS89_15650 PF01809 Putative membrane protein insertion efficiency factor MKS89_15655 PF00825 Ribonuclease P MKS89_15660 PF00468 Ribosomal protein L34 MKS89_15665 PF00005 ABC transporter MKS89_15670 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_15675 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_15685 PF00529 HlyD membrane-fusion protein of T1SS MKS89_15695 PF00232 Glycosyl hydrolase family 1 MKS89_15700 PF02743 Cache domain MKS89_15700 PF00672 HAMP domain MKS89_15700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_15710 PF07681 DoxX MKS89_15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_15715 PF03466 LysR substrate binding domain MKS89_15720 PF04219 Protein of unknown function, DUF MKS89_15725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_15725 PF02378 Phosphotransferase system, EIIC MKS89_15725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_15730 PF01232 Mannitol dehydrogenase Rossmann domain MKS89_15730 PF08125 Mannitol dehydrogenase C-terminal domain MKS89_15735 PF05068 Mannitol repressor MKS89_15745 PF00474 Sodium:solute symporter family MKS89_15755 PF14850 DNA-binding domain of Proline dehydrogenase MKS89_15755 PF18327 Proline utilization A proline dehydrogenase N-terminal domain MKS89_15755 PF00171 Aldehyde dehydrogenase family MKS89_15755 PF01619 Proline dehydrogenase MKS89_15760 PF12833 Helix-turn-helix domain MKS89_15770 PF03781 Sulfatase-modifying factor enzyme 1 MKS89_15775 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region MKS89_15775 PF01243 Pyridoxamine 5'-phosphate oxidase MKS89_15780 PF00529 HlyD membrane-fusion protein of T1SS MKS89_15795 PF00005 ABC transporter MKS89_15795 PF00664 ABC transporter transmembrane region MKS89_15795 PF03412 Peptidase C39 family MKS89_15805 PF13718 GNAT acetyltransferase 2 MKS89_15805 PF05127 Helicase MKS89_15815 PF18607 ParA helix turn helix domain MKS89_15815 PF13614 AAA domain MKS89_15835 PF01709 Transcriptional regulator MKS89_15840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MKS89_15840 PF06481 COX Aromatic Rich Motif MKS89_15845 PF00115 Cytochrome C and Quinol oxidase polypeptide I MKS89_15850 PF00510 Cytochrome c oxidase subunit III MKS89_15855 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MKS89_15860 PF01040 UbiA prenyltransferase family MKS89_15865 PF00343 Carbohydrate phosphorylase MKS89_15870 PF02446 4-alpha-glucanotransferase MKS89_15875 PF02806 Alpha amylase, C-terminal all-beta domain MKS89_15875 PF00128 Alpha amylase, catalytic domain MKS89_15875 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MKS89_15880 PF01565 FAD binding domain MKS89_15880 PF02913 FAD linked oxidases, C-terminal domain MKS89_15900 PF07690 Major Facilitator Superfamily MKS89_15905 PF01047 MarR family MKS89_15910 PF02441 Flavoprotein MKS89_15915 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MKS89_15925 PF17189 Glycosyl hydrolase family 30 beta sandwich domain MKS89_15935 PF12464 Maltose acetyltransferase MKS89_15935 PF14602 Hexapeptide repeat of succinyl-transferase MKS89_15960 PF13654 AAA domain MKS89_15960 PF05362 Lon protease (S16) C-terminal proteolytic domain MKS89_15965 PF01554 MatE MKS89_15970 PF00793 DAHP synthetase I family MKS89_15975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKS89_15975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKS89_15975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKS89_15975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKS89_15980 PF08019 Phosphoethanolamine transferase EptA/EptB MKS89_15980 PF00884 Sulfatase MKS89_15985 PF01219 Prokaryotic diacylglycerol kinase MKS89_15990 PF00480 ROK family MKS89_15995 PF00563 EAL domain MKS89_15995 PF00990 Diguanylate cyclase, GGDEF domain MKS89_15995 PF03707 Bacterial signalling protein N terminal repeat MKS89_16010 PF03352 Methyladenine glycosylase MKS89_16015 PF02626 Carboxyltransferase domain, subdomain A and B MKS89_16025 PF00364 Biotin-requiring enzyme MKS89_16030 PF03746 LamB/YcsF family MKS89_16045 PF01769 Divalent cation transporter MKS89_16045 PF00571 CBS domain MKS89_16045 PF03448 MgtE intracellular N domain MKS89_16050 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MKS89_16055 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_16060 PF00571 CBS domain MKS89_16060 PF00005 ABC transporter MKS89_16075 PF00194 Eukaryotic-type carbonic anhydrase MKS89_16080 PF03605 Anaerobic c4-dicarboxylate membrane transporter MKS89_16085 PF02540 NAD synthase MKS89_16090 PF01467 Cytidylyltransferase-like MKS89_16095 PF11849 Domain of unknown function (DUF3369) MKS89_16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_16100 PF00512 His Kinase A (phospho-acceptor) domain MKS89_16100 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_16105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_16105 PF00512 His Kinase A (phospho-acceptor) domain MKS89_16105 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_16120 PF01037 Lrp/AsnC ligand binding domain MKS89_16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_16125 PF03466 LysR substrate binding domain MKS89_16140 PF00245 Alkaline phosphatase MKS89_16160 PF00501 AMP-binding enzyme MKS89_16175 PF00486 Transcriptional regulatory protein, C terminal MKS89_16175 PF00072 Response regulator receiver domain MKS89_16180 PF00512 His Kinase A (phospho-acceptor) domain MKS89_16180 PF08521 Two-component sensor kinase N-terminal MKS89_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_16195 PF00501 AMP-binding enzyme MKS89_16195 PF13193 AMP-binding enzyme C-terminal domain MKS89_16200 PF00583 Acetyltransferase (GNAT) family MKS89_16205 PF00202 Aminotransferase class-III MKS89_16210 PF06339 Ectoine synthase MKS89_16215 PF13840 ACT domain MKS89_16215 PF00696 Amino acid kinase family MKS89_16220 PF00710 Asparaginase, N-terminal MKS89_16220 PF17763 Glutaminase/Asparaginase C-terminal domain MKS89_16230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16230 PF00672 HAMP domain MKS89_16230 PF02743 Cache domain MKS89_16235 PF05726 Pirin C-terminal cupin domain MKS89_16235 PF02678 Pirin MKS89_16245 PF00924 Mechanosensitive ion channel MKS89_16255 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MKS89_16255 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MKS89_16270 PF00072 Response regulator receiver domain MKS89_16270 PF00990 Diguanylate cyclase, GGDEF domain MKS89_16285 PF00072 Response regulator receiver domain MKS89_16285 PF01584 CheW-like domain MKS89_16290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16290 PF08447 PAS fold MKS89_16290 PF13426 PAS domain MKS89_16300 PF13302 Acetyltransferase (GNAT) domain MKS89_16310 PF03466 LysR substrate binding domain MKS89_16310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_16315 PF02056 Family 4 glycosyl hydrolase MKS89_16315 PF11975 Family 4 glycosyl hydrolase C-terminal domain MKS89_16320 PF12843 Putative quorum-sensing-regulated virulence factor MKS89_16325 PF14521 Lysine-specific metallo-endopeptidase MKS89_16330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKS89_16330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKS89_16345 PF05992 SbmA/BacA-like family MKS89_16355 PF01047 MarR family MKS89_16360 PF02566 OsmC-like protein MKS89_16365 PF00085 Thioredoxin MKS89_16375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16375 PF12729 Four helix bundle sensory module for signal transduction MKS89_16375 PF00672 HAMP domain MKS89_16380 PF02743 Cache domain MKS89_16380 PF00672 HAMP domain MKS89_16380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16385 PF13417 Glutathione S-transferase, N-terminal domain MKS89_16385 PF00043 Glutathione S-transferase, C-terminal domain MKS89_16395 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_16400 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_16405 PF00005 ABC transporter MKS89_16410 PF12833 Helix-turn-helix domain MKS89_16415 PF01810 LysE type translocator MKS89_16420 PF01037 Lrp/AsnC ligand binding domain MKS89_16420 PF13404 AsnC-type helix-turn-helix domain MKS89_16430 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MKS89_16430 PF02837 Glycosyl hydrolases family 2, sugar binding domain MKS89_16430 PF02929 Beta galactosidase small chain MKS89_16430 PF16353 Domain of unknown function(DUF4981) MKS89_16430 PF00703 Glycosyl hydrolases family 2 MKS89_16460 PF01882 Protein of unknown function DUF58 MKS89_16465 PF07726 ATPase family associated with various cellular activities (AAA) MKS89_16465 PF17863 AAA lid domain MKS89_16470 PF02743 Cache domain MKS89_16470 PF00672 HAMP domain MKS89_16470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16480 PF00155 Aminotransferase class I and II MKS89_16490 PF07687 Peptidase dimerisation domain MKS89_16490 PF01546 Peptidase family M20/M25/M40 MKS89_16500 PF01590 GAF domain MKS89_16500 PF00158 Sigma-54 interaction domain MKS89_16505 PF00313 'Cold-shock' DNA-binding domain MKS89_16510 PF03889 Alternative ribosome-rescue factor A MKS89_16520 PF00672 HAMP domain MKS89_16520 PF01627 Hpt domain MKS89_16520 PF00072 Response regulator receiver domain MKS89_16520 PF00512 His Kinase A (phospho-acceptor) domain MKS89_16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_16520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKS89_16530 PF01256 Carbohydrate kinase MKS89_16530 PF03853 YjeF-related protein N-terminus MKS89_16540 PF00478 IMP dehydrogenase / GMP reductase domain MKS89_16545 PF13520 Amino acid permease MKS89_16550 PF05985 Ethanolamine ammonia-lyase light chain (EutC) MKS89_16555 PF06751 Ethanolamine ammonia lyase large subunit (EutB) MKS89_16560 PF12833 Helix-turn-helix domain MKS89_16570 PF00472 RF-1 domain MKS89_16580 PF00990 Diguanylate cyclase, GGDEF domain MKS89_16590 PF01212 Beta-eliminating lyase MKS89_16600 PF01548 Transposase MKS89_16600 PF02371 Transposase IS116/IS110/IS902 family MKS89_16620 PF00232 Glycosyl hydrolase family 1 MKS89_16625 PF02378 Phosphotransferase system, EIIC MKS89_16625 PF00367 phosphotransferase system, EIIB MKS89_16630 PF01202 Shikimate kinase MKS89_16635 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKS89_16635 PF00356 Bacterial regulatory proteins, lacI family MKS89_16640 PF03466 LysR substrate binding domain MKS89_16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_16650 PF00672 HAMP domain MKS89_16650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16655 PF04286 Protein of unknown function (DUF445) MKS89_16660 PF00005 ABC transporter MKS89_16660 PF00664 ABC transporter transmembrane region MKS89_16665 PF00128 Alpha amylase, catalytic domain MKS89_16665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MKS89_16680 PF00375 Sodium:dicarboxylate symporter family MKS89_16690 PF17158 Membrane-associated sensor, integral membrane domain MKS89_16690 PF00990 Diguanylate cyclase, GGDEF domain MKS89_16700 PF08349 Protein of unknown function (DUF1722) MKS89_16705 PF13411 MerR HTH family regulatory protein MKS89_16710 PF03441 FAD binding domain of DNA photolyase MKS89_16710 PF00875 DNA photolyase MKS89_16715 PF03734 L,D-transpeptidase catalytic domain MKS89_16715 PF17969 L,D-transpeptidase C-terminal domain MKS89_16715 PF01476 LysM domain MKS89_16725 PF00270 DEAD/DEAH box helicase MKS89_16725 PF00271 Helicase conserved C-terminal domain MKS89_16730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_16730 PF00672 HAMP domain MKS89_16730 PF17200 Single Cache domain 2 MKS89_16735 PF12849 PBP superfamily domain MKS89_16740 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_16745 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_16750 PF00005 ABC transporter MKS89_16755 PF07670 Nucleoside recognition MKS89_16765 PF08525 Opacity-associated protein A N-terminal motif MKS89_16765 PF01476 LysM domain MKS89_16765 PF01551 Peptidase family M23 MKS89_16770 PF08447 PAS fold MKS89_16770 PF08448 PAS fold MKS89_16770 PF00990 Diguanylate cyclase, GGDEF domain MKS89_16770 PF00563 EAL domain MKS89_16780 PF13609 Gram-negative porin MKS89_16785 PF04336 Acyl carrier protein phosphodiesterase MKS89_16790 PF07690 Major Facilitator Superfamily MKS89_16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_16795 PF03466 LysR substrate binding domain MKS89_16800 PF00248 Aldo/keto reductase family MKS89_16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_16805 PF03466 LysR substrate binding domain MKS89_16810 PF13302 Acetyltransferase (GNAT) domain MKS89_16830 PF01557 Fumarylacetoacetate (FAA) hydrolase family MKS89_16835 PF03600 Citrate transporter MKS89_16840 PF01810 LysE type translocator MKS89_16845 PF00367 phosphotransferase system, EIIB MKS89_16845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_16845 PF02378 Phosphotransferase system, EIIC MKS89_16850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKS89_16850 PF02378 Phosphotransferase system, EIIC MKS89_16850 PF00367 phosphotransferase system, EIIB MKS89_16855 PF03123 CAT RNA binding domain MKS89_16855 PF00874 PRD domain MKS89_16860 PF00232 Glycosyl hydrolase family 1 MKS89_16875 PF01914 MarC family integral membrane protein MKS89_16900 PF01554 MatE MKS89_16910 PF03063 Prismane/CO dehydrogenase family MKS89_16930 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) MKS89_16930 PF00072 Response regulator receiver domain MKS89_16930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_16930 PF00512 His Kinase A (phospho-acceptor) domain MKS89_16930 PF01627 Hpt domain MKS89_16930 PF00672 HAMP domain MKS89_16935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKS89_16940 PF02566 OsmC-like protein MKS89_16945 PF02311 AraC-like ligand binding domain MKS89_16945 PF12833 Helix-turn-helix domain MKS89_16950 PF05661 Protein of unknown function (DUF808) MKS89_16955 PF13649 Methyltransferase domain MKS89_16970 PF02954 Bacterial regulatory protein, Fis family MKS89_16970 PF00158 Sigma-54 interaction domain MKS89_16970 PF00072 Response regulator receiver domain MKS89_16980 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MKS89_17080 PF01979 Amidohydrolase family MKS89_17085 PF00970 Oxidoreductase FAD-binding domain MKS89_17085 PF00175 Oxidoreductase NAD-binding domain MKS89_17085 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_17115 PF17200 Single Cache domain 2 MKS89_17115 PF00672 HAMP domain MKS89_17115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_17120 PF02574 Homocysteine S-methyltransferase MKS89_17120 PF02219 Methylenetetrahydrofolate reductase MKS89_17130 PF00672 HAMP domain MKS89_17130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_17140 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH MKS89_17160 PF00881 Nitroreductase family MKS89_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_17165 PF03466 LysR substrate binding domain MKS89_17185 PF14581 SseB protein C-terminal domain MKS89_17185 PF07179 SseB protein N-terminal domain MKS89_17200 PF13476 AAA domain MKS89_17215 PF18030 RimK PreATP-grasp domain MKS89_17215 PF02080 TrkA-C domain MKS89_17215 PF08443 RimK-like ATP-grasp domain MKS89_17230 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MKS89_17230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MKS89_17235 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MKS89_17240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MKS89_17240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MKS89_17245 PF11849 Domain of unknown function (DUF3369) MKS89_17260 PF04400 (Na+)-NQR maturation NqrM MKS89_17265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MKS89_17265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKS89_17280 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_17280 PF00107 Zinc-binding dehydrogenase MKS89_17285 PF03330 Lytic transglycolase MKS89_17290 PF04958 Arginine N-succinyltransferase beta subunit MKS89_17295 PF04958 Arginine N-succinyltransferase beta subunit MKS89_17300 PF00171 Aldehyde dehydrogenase family MKS89_17305 PF04996 Succinylarginine dihydrolase MKS89_17310 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family MKS89_17315 PF00990 Diguanylate cyclase, GGDEF domain MKS89_17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_17320 PF00512 His Kinase A (phospho-acceptor) domain MKS89_17330 PF01145 SPFH domain / Band 7 family MKS89_17350 PF10688 Bacterial inner membrane protein MKS89_17355 PF00529 HlyD membrane-fusion protein of T1SS MKS89_17355 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_17360 PF00873 AcrB/AcrD/AcrF family MKS89_17365 PF00155 Aminotransferase class I and II MKS89_17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_17370 PF00072 Response regulator receiver domain MKS89_17375 PF01471 Putative peptidoglycan binding domain MKS89_17375 PF04717 Type VI secretion system, phage-baseplate injector MKS89_17385 PF14310 Fibronectin type III-like domain MKS89_17385 PF00933 Glycosyl hydrolase family 3 N terminal domain MKS89_17385 PF01915 Glycosyl hydrolase family 3 C-terminal domain MKS89_17390 PF00722 Glycosyl hydrolases family 16 MKS89_17405 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin MKS89_17410 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKS89_17415 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_17420 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_17425 PF00005 ABC transporter MKS89_17430 PF01418 Helix-turn-helix domain, rpiR family MKS89_17430 PF01380 SIS domain MKS89_17435 PF13593 SBF-like CPA transporter family (DUF4137) MKS89_17440 PF01425 Amidase MKS89_17450 PF00266 Aminotransferase class-V MKS89_17455 PF01546 Peptidase family M20/M25/M40 MKS89_17455 PF07687 Peptidase dimerisation domain MKS89_17480 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system MKS89_17485 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA MKS89_17490 PF03466 LysR substrate binding domain MKS89_17490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_17500 PF13520 Amino acid permease MKS89_17505 PF04371 Porphyromonas-type peptidyl-arginine deiminase MKS89_17510 PF00703 Glycosyl hydrolases family 2 MKS89_17510 PF02836 Glycosyl hydrolases family 2, TIM barrel domain MKS89_17510 PF02837 Glycosyl hydrolases family 2, sugar binding domain MKS89_17515 PF03573 outer membrane porin, OprD family MKS89_17520 PF02378 Phosphotransferase system, EIIC MKS89_17525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_17530 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MKS89_17535 PF08279 HTH domain MKS89_17535 PF05043 Mga helix-turn-helix domain MKS89_17535 PF00874 PRD domain MKS89_17535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_17540 PF00465 Iron-containing alcohol dehydrogenase MKS89_17550 PF02028 BCCT, betaine/carnitine/choline family transporter MKS89_17555 PF00582 Universal stress protein family MKS89_17560 PF03601 Conserved hypothetical protein 698 MKS89_17570 PF01810 LysE type translocator MKS89_17580 PF01053 Cys/Met metabolism PLP-dependent enzyme MKS89_17585 PF13599 Pentapeptide repeats (9 copies) MKS89_17595 PF00672 HAMP domain MKS89_17595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_17605 PF01544 CorA-like Mg2+ transporter protein MKS89_17615 PF00083 Sugar (and other) transporter MKS89_17620 PF12833 Helix-turn-helix domain MKS89_17625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKS89_17625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKS89_17630 PF00854 POT family MKS89_17635 PF14600 Cellulose-binding domain MKS89_17635 PF00150 Cellulase (glycosyl hydrolase family 5) MKS89_17655 PF00360 Phytochrome region MKS89_17655 PF01590 GAF domain MKS89_17655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_17655 PF00512 His Kinase A (phospho-acceptor) domain MKS89_17655 PF08446 PAS fold MKS89_17660 PF00563 EAL domain MKS89_17660 PF00990 Diguanylate cyclase, GGDEF domain MKS89_17660 PF03707 Bacterial signalling protein N terminal repeat MKS89_17665 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_17665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKS89_17670 PF02909 Tetracyclin repressor-like, C-terminal domain MKS89_17670 PF00440 Bacterial regulatory proteins, tetR family MKS89_17680 PF02595 Glycerate kinase family MKS89_17690 PF03422 Carbohydrate binding module (family 6) MKS89_17690 PF00331 Glycosyl hydrolase family 10 MKS89_17690 PF00553 Cellulose binding domain MKS89_17695 PF02378 Phosphotransferase system, EIIC MKS89_17695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_17700 PF00294 pfkB family carbohydrate kinase MKS89_17705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_17705 PF00381 PTS HPr component phosphorylation site MKS89_17710 PF00356 Bacterial regulatory proteins, lacI family MKS89_17710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKS89_17725 PF00072 Response regulator receiver domain MKS89_17725 PF00486 Transcriptional regulatory protein, C terminal MKS89_17730 PF08521 Two-component sensor kinase N-terminal MKS89_17730 PF00512 His Kinase A (phospho-acceptor) domain MKS89_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_17740 PF04303 PrpF protein MKS89_17750 PF01970 Tripartite tricarboxylate transporter TctA family MKS89_17790 PF00270 DEAD/DEAH box helicase MKS89_17790 PF18019 HD domain MKS89_17790 PF00271 Helicase conserved C-terminal domain MKS89_17810 PF09704 CRISPR-associated protein (Cas_Cas5) MKS89_17820 PF01867 CRISPR associated protein Cas1 MKS89_17825 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) MKS89_17840 PF01183 Glycosyl hydrolases family 25 MKS89_17840 PF01471 Putative peptidoglycan binding domain MKS89_17850 PF05025 RbsD / FucU transport protein family MKS89_17855 PF00005 ABC transporter MKS89_17860 PF02653 Branched-chain amino acid transport system / permease component MKS89_17865 PF13407 Periplasmic binding protein domain MKS89_17870 PF00294 pfkB family carbohydrate kinase MKS89_17875 PF00356 Bacterial regulatory proteins, lacI family MKS89_17880 PF06826 Predicted Permease Membrane Region MKS89_17880 PF02080 TrkA-C domain MKS89_17885 PF00950 ABC 3 transport family MKS89_17890 PF00950 ABC 3 transport family MKS89_17895 PF00005 ABC transporter MKS89_17900 PF01297 Zinc-uptake complex component A periplasmic MKS89_17905 PF01575 MaoC like domain MKS89_17910 PF01037 Lrp/AsnC ligand binding domain MKS89_17915 PF00291 Pyridoxal-phosphate dependent enzyme MKS89_17920 PF03605 Anaerobic c4-dicarboxylate membrane transporter MKS89_17925 PF00717 Peptidase S24-like MKS89_17925 PF01381 Helix-turn-helix MKS89_18015 PF07484 Phage Tail Collar Domain MKS89_18055 PF03129 Anticodon binding domain MKS89_18055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKS89_18055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MKS89_18055 PF02824 TGS domain MKS89_18060 PF00707 Translation initiation factor IF-3, C-terminal domain MKS89_18060 PF05198 Translation initiation factor IF-3, N-terminal domain MKS89_18065 PF01632 Ribosomal protein L35 MKS89_18070 PF00453 Ribosomal protein L20 MKS89_18075 PF07690 Major Facilitator Superfamily MKS89_18085 PF13419 Haloacid dehalogenase-like hydrolase MKS89_18090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase MKS89_18090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKS89_18100 PF00456 Transketolase, thiamine diphosphate binding domain MKS89_18100 PF02780 Transketolase, C-terminal domain MKS89_18100 PF02779 Transketolase, pyrimidine binding domain MKS89_18105 PF00923 Transaldolase/Fructose-6-phosphate aldolase MKS89_18115 PF00581 Rhodanese-like domain MKS89_18120 PF00899 ThiF family MKS89_18125 PF03454 MoeA C-terminal region (domain IV) MKS89_18125 PF00994 Probable molybdopterin binding domain MKS89_18125 PF03453 MoeA N-terminal region (domain I and II) MKS89_18130 PF01227 GTP cyclohydrolase I MKS89_18135 PF01095 Pectinesterase MKS89_18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_18145 PF03466 LysR substrate binding domain MKS89_18150 PF13419 Haloacid dehalogenase-like hydrolase MKS89_18155 PF07702 UTRA domain MKS89_18155 PF00392 Bacterial regulatory proteins, gntR family MKS89_18165 PF00293 NUDIX domain MKS89_18170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_18175 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_18180 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_18180 PF12911 N-terminal TM domain of oligopeptide transport permease C MKS89_18185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_18185 PF00005 ABC transporter MKS89_18190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKS89_18190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKS89_18200 PF01292 Prokaryotic cytochrome b561 MKS89_18205 PF04264 YceI-like domain MKS89_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_18215 PF03466 LysR substrate binding domain MKS89_18220 PF11398 Protein of unknown function (DUF2813) MKS89_18225 PF02872 5'-nucleotidase, C-terminal domain MKS89_18225 PF00149 Calcineurin-like phosphoesterase MKS89_18235 PF08274 PhnA Zinc-Ribbon MKS89_18235 PF03831 PhnA domain MKS89_18240 PF03061 Thioesterase superfamily MKS89_18245 PF12793 Sugar transport-related sRNA regulator N-term MKS89_18245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_18250 PF03466 LysR substrate binding domain MKS89_18255 PF00583 Acetyltransferase (GNAT) family MKS89_18255 PF13380 CoA binding domain MKS89_18255 PF13607 Succinyl-CoA ligase like flavodoxin domain MKS89_18265 PF01820 D-ala D-ala ligase N-terminus MKS89_18265 PF07478 D-ala D-ala ligase C-terminus MKS89_18280 PF01253 Translation initiation factor SUI1 MKS89_18285 PF00465 Iron-containing alcohol dehydrogenase MKS89_18300 PF00072 Response regulator receiver domain MKS89_18300 PF00486 Transcriptional regulatory protein, C terminal MKS89_18310 PF02233 NAD(P) transhydrogenase beta subunit MKS89_18315 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKS89_18315 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKS89_18315 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch MKS89_18330 PF00990 Diguanylate cyclase, GGDEF domain MKS89_18345 PF01012 Electron transfer flavoprotein domain MKS89_18345 PF00766 Electron transfer flavoprotein FAD-binding domain MKS89_18350 PF01012 Electron transfer flavoprotein domain MKS89_18355 PF02770 Acyl-CoA dehydrogenase, middle domain MKS89_18355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKS89_18355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKS89_18360 PF16875 Glycosyl hydrolase family 36 N-terminal domain MKS89_18360 PF16874 Glycosyl hydrolase family 36 C-terminal domain MKS89_18365 PF13426 PAS domain MKS89_18365 PF02954 Bacterial regulatory protein, Fis family MKS89_18365 PF00158 Sigma-54 interaction domain MKS89_18370 PF01979 Amidohydrolase family MKS89_18375 PF00939 Sodium:sulfate symporter transmembrane region MKS89_18380 PF03737 Aldolase/RraA MKS89_18385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_18385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_18405 PF04023 FeoA domain MKS89_18405 PF07664 Ferrous iron transport protein B C terminus MKS89_18405 PF17910 FeoB cytosolic helical domain MKS89_18405 PF02421 Ferrous iron transport protein B MKS89_18405 PF07670 Nucleoside recognition MKS89_18425 PF00005 ABC transporter MKS89_18425 PF03459 TOBE domain MKS89_18430 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_18440 PF03707 Bacterial signalling protein N terminal repeat MKS89_18440 PF00990 Diguanylate cyclase, GGDEF domain MKS89_18440 PF00563 EAL domain MKS89_18450 PF00672 HAMP domain MKS89_18450 PF12729 Four helix bundle sensory module for signal transduction MKS89_18450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_18460 PF00005 ABC transporter MKS89_18465 PF02653 Branched-chain amino acid transport system / permease component MKS89_18470 PF02653 Branched-chain amino acid transport system / permease component MKS89_18475 PF02608 ABC transporter substrate-binding protein PnrA-like MKS89_18480 PF01799 [2Fe-2S] binding domain MKS89_18480 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MKS89_18480 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MKS89_18480 PF00111 2Fe-2S iron-sulfur cluster binding domain MKS89_18500 PF00576 HIUase/Transthyretin family MKS89_18505 PF01979 Amidohydrolase family MKS89_18515 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) MKS89_18540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_18545 PF00005 ABC transporter MKS89_18545 PF02687 FtsX-like permease family MKS89_18545 PF12704 MacB-like periplasmic core domain MKS89_18550 PF02321 Outer membrane efflux protein MKS89_18570 PF13597 Anaerobic ribonucleoside-triphosphate reductase MKS89_18570 PF03477 ATP cone domain MKS89_18575 PF00873 AcrB/AcrD/AcrF family MKS89_18580 PF00529 HlyD membrane-fusion protein of T1SS MKS89_18580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_18595 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_18595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKS89_18600 PF00392 Bacterial regulatory proteins, gntR family MKS89_18600 PF07702 UTRA domain MKS89_18605 PF00294 pfkB family carbohydrate kinase MKS89_18610 PF03747 ADP-ribosylglycohydrolase MKS89_18615 PF03825 Nucleoside H+ symporter MKS89_18620 PF00107 Zinc-binding dehydrogenase MKS89_18620 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_18625 PF00578 AhpC/TSA family MKS89_18625 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKS89_18630 PF13192 Thioredoxin domain MKS89_18630 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKS89_18645 PF00384 Molybdopterin oxidoreductase MKS89_18660 PF00271 Helicase conserved C-terminal domain MKS89_18660 PF00270 DEAD/DEAH box helicase MKS89_18665 PF00271 Helicase conserved C-terminal domain MKS89_18665 PF00270 DEAD/DEAH box helicase MKS89_18665 PF03880 DbpA RNA binding domain MKS89_18670 PF00795 Carbon-nitrogen hydrolase MKS89_18670 PF00583 Acetyltransferase (GNAT) family MKS89_18675 PF04616 Glycosyl hydrolases family 43 MKS89_18685 PF00563 EAL domain MKS89_18685 PF12792 CSS motif domain associated with EAL MKS89_18695 PF13426 PAS domain MKS89_18695 PF08447 PAS fold MKS89_18695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_18700 PF02525 Flavodoxin-like fold MKS89_18705 PF00005 ABC transporter MKS89_18705 PF16326 ABC transporter C-terminal domain MKS89_18705 PF12848 ABC transporter MKS89_18725 PF02914 Bacteriophage Mu transposase MKS89_18725 PF02316 Mu DNA-binding domain MKS89_18725 PF09039 Mu DNA binding, I gamma subdomain MKS89_18725 PF09299 Mu transposase, C-terminal MKS89_18730 PF13401 AAA domain MKS89_18730 PF09077 Mu B transposition protein, C terminal MKS89_18805 PF08765 Mor transcription activator family MKS89_18840 PF08461 Ribonuclease R winged-helix domain MKS89_18845 PF11985 Protein of unknown function (DUF3486) MKS89_18855 PF03237 Terminase-like family MKS89_18860 PF06074 Protein of unknown function (DUF935) MKS89_18875 PF10124 Mu-like prophage major head subunit gpT MKS89_18915 PF04984 Phage tail sheath protein subtilisin-like domain MKS89_18915 PF17482 Phage tail sheath C-terminal domain MKS89_18925 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 MKS89_18960 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) MKS89_18975 PF00672 HAMP domain MKS89_18975 PF02743 Cache domain MKS89_18975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_18980 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_18980 PF00107 Zinc-binding dehydrogenase MKS89_18985 PF00155 Aminotransferase class I and II MKS89_18990 PF00232 Glycosyl hydrolase family 1 MKS89_18995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_18995 PF08447 PAS fold MKS89_19000 PF03880 DbpA RNA binding domain MKS89_19000 PF00270 DEAD/DEAH box helicase MKS89_19000 PF00271 Helicase conserved C-terminal domain MKS89_19005 PF08206 Ribonuclease B OB domain MKS89_19005 PF00773 RNB domain MKS89_19005 PF00575 S1 RNA binding domain MKS89_19015 PF12849 PBP superfamily domain MKS89_19020 PF00654 Voltage gated chloride channel MKS89_19025 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKS89_19025 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKS89_19030 PF01926 50S ribosome-binding GTPase MKS89_19035 PF00561 alpha/beta hydrolase fold MKS89_19035 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus MKS89_19045 PF02803 Thiolase, C-terminal domain MKS89_19045 PF00108 Thiolase, N-terminal domain MKS89_19050 PF00106 short chain dehydrogenase MKS89_19060 PF00483 Nucleotidyl transferase MKS89_19070 PF02142 MGS-like domain MKS89_19075 PF12462 DNA helicase IV / RNA helicase N terminal MKS89_19075 PF00580 UvrD/REP helicase N-terminal domain MKS89_19075 PF13361 UvrD-like helicase C-terminal domain MKS89_19080 PF12805 FUSC-like inner membrane protein yccS MKS89_19095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MKS89_19095 PF07685 CobB/CobQ-like glutamine amidotransferase domain MKS89_19105 PF00072 Response regulator receiver domain MKS89_19105 PF09308 LuxQ, periplasmic MKS89_19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKS89_19105 PF00512 His Kinase A (phospho-acceptor) domain MKS89_19120 PF01541 GIY-YIG catalytic domain MKS89_19125 PF04337 Protein of unknown function, DUF480 MKS89_19130 PF04363 Protein of unknown function (DUF496) MKS89_19135 PF08534 Redoxin MKS89_19140 PF00293 NUDIX domain MKS89_19145 PF03186 CobD/Cbib protein MKS89_19150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MKS89_19150 PF07685 CobB/CobQ-like glutamine amidotransferase domain MKS89_19170 PF02798 Glutathione S-transferase, N-terminal domain MKS89_19175 PF01184 GPR1/FUN34/yaaH family MKS89_19180 PF06629 MltA-interacting protein MipA MKS89_19185 PF05762 VWA domain containing CoxE-like protein MKS89_19190 PF12592 Protein of unknown function (DUF3763) MKS89_19190 PF07728 AAA domain (dynein-related subfamily) MKS89_19190 PF17868 AAA lid domain MKS89_19200 PF00440 Bacterial regulatory proteins, tetR family MKS89_19205 PF16363 GDP-mannose 4,6 dehydratase MKS89_19210 PF01494 FAD binding domain MKS89_19220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKS89_19220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MKS89_19230 PF00759 Glycosyl hydrolase family 9 MKS89_19230 PF00404 Dockerin type I domain MKS89_19230 PF02927 Cellulase N-terminal ig-like domain MKS89_19230 PF02018 Carbohydrate binding domain MKS89_19250 PF01914 MarC family integral membrane protein MKS89_19260 PF00005 ABC transporter MKS89_19265 PF13472 GDSL-like Lipase/Acylhydrolase family MKS89_19270 PF07055 Enoyl reductase FAD binding domain MKS89_19270 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase MKS89_19270 PF12241 Trans-2-enoyl-CoA reductase catalytic region MKS89_19275 PF00990 Diguanylate cyclase, GGDEF domain MKS89_19275 PF00563 EAL domain MKS89_19275 PF03707 Bacterial signalling protein N terminal repeat MKS89_19280 PF00226 DnaJ domain MKS89_19280 PF01556 DnaJ C terminal domain MKS89_19280 PF00684 DnaJ central domain MKS89_19300 PF00722 Glycosyl hydrolases family 16 MKS89_19305 PF00759 Glycosyl hydrolase family 9 MKS89_19305 PF00404 Dockerin type I domain MKS89_19305 PF02927 Cellulase N-terminal ig-like domain MKS89_19305 PF02018 Carbohydrate binding domain MKS89_19310 PF00356 Bacterial regulatory proteins, lacI family MKS89_19320 PF06165 Glycosyltransferase family 36 MKS89_19320 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain MKS89_19325 PF00005 ABC transporter MKS89_19325 PF08402 TOBE domain MKS89_19330 PF00232 Glycosyl hydrolase family 1 MKS89_19335 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_19340 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_19350 PF00356 Bacterial regulatory proteins, lacI family MKS89_19355 PF00672 HAMP domain MKS89_19355 PF12729 Four helix bundle sensory module for signal transduction MKS89_19355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_19360 PF00871 Acetokinase family MKS89_19375 PF00563 EAL domain MKS89_19375 PF03707 Bacterial signalling protein N terminal repeat MKS89_19375 PF13188 PAS domain MKS89_19375 PF00990 Diguanylate cyclase, GGDEF domain MKS89_19385 PF08669 Glycine cleavage T-protein C-terminal barrel domain MKS89_19385 PF01571 Aminomethyltransferase folate-binding domain MKS89_19395 PF01597 Glycine cleavage H-protein MKS89_19400 PF02347 Glycine cleavage system P-protein MKS89_19435 PF00149 Calcineurin-like phosphoesterase MKS89_19435 PF12320 Type 5 capsule protein repressor C-terminal domain MKS89_19440 PF13476 AAA domain MKS89_19460 PF13476 AAA domain MKS89_19475 PF00583 Acetyltransferase (GNAT) family MKS89_19520 PF01867 CRISPR associated protein Cas1 MKS89_19520 PF01930 Domain of unknown function DUF83 MKS89_19525 PF09827 CRISPR associated protein Cas2 MKS89_19530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_19530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_19535 PF01740 STAS domain MKS89_19535 PF00916 Sulfate permease family MKS89_19545 PF00990 Diguanylate cyclase, GGDEF domain MKS89_19545 PF00072 Response regulator receiver domain MKS89_19580 PF01263 Aldose 1-epimerase MKS89_19585 PF08544 GHMP kinases C terminal MKS89_19585 PF00288 GHMP kinases N terminal domain MKS89_19585 PF10509 Galactokinase galactose-binding signature MKS89_19590 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain MKS89_19590 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain MKS89_19600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion MKS89_19600 PF00529 HlyD membrane-fusion protein of T1SS MKS89_19605 PF04632 Fusaric acid resistance protein family MKS89_19615 PF00801 PKD domain MKS89_19615 PF05547 Immune inhibitor A peptidase M6 MKS89_19630 PF07722 Peptidase C26 MKS89_19640 PF07274 Protein of unknown function (DUF1440) MKS89_19645 PF00171 Aldehyde dehydrogenase family MKS89_19650 PF01590 GAF domain MKS89_19650 PF02954 Bacterial regulatory protein, Fis family MKS89_19650 PF00158 Sigma-54 interaction domain MKS89_19655 PF01842 ACT domain MKS89_19655 PF00800 Prephenate dehydratase MKS89_19660 PF03466 LysR substrate binding domain MKS89_19660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_19665 PF00455 DeoR C terminal sensor domain MKS89_19665 PF08220 DeoR-like helix-turn-helix domain MKS89_19670 PF03009 Glycerophosphoryl diester phosphodiesterase family MKS89_19675 PF13416 Bacterial extracellular solute-binding protein MKS89_19680 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_19685 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_19690 PF17912 MalK OB fold domain MKS89_19690 PF00005 ABC transporter MKS89_19700 PF10502 Signal peptidase, peptidase S26 MKS89_19705 PF00795 Carbon-nitrogen hydrolase MKS89_19705 PF02540 NAD synthase MKS89_19750 PF13302 Acetyltransferase (GNAT) domain MKS89_19755 PF01327 Polypeptide deformylase MKS89_19760 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MKS89_19765 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system MKS89_19790 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_19795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_19805 PF01042 Endoribonuclease L-PSP MKS89_19810 PF07969 Amidohydrolase family MKS89_19830 PF13358 DDE superfamily endonuclease MKS89_19865 PF02013 Cellulose or protein binding domain MKS89_19865 PF01522 Polysaccharide deacetylase MKS89_19865 PF16841 Ca-dependent carbohydrate-binding module xylan-binding MKS89_19865 PF00457 Glycosyl hydrolases family 11 MKS89_19880 PF01361 Tautomerase enzyme MKS89_19885 PF00892 EamA-like transporter family MKS89_19900 PF03829 PTS system glucitol/sorbitol-specific IIA component MKS89_19905 PF07663 Sorbitol phosphotransferase enzyme II C-terminus MKS89_19905 PF03612 Sorbitol phosphotransferase enzyme II N-terminus MKS89_19910 PF03608 PTS system enzyme II sorbitol-specific factor MKS89_19915 PF08220 DeoR-like helix-turn-helix domain MKS89_19915 PF00455 DeoR C terminal sensor domain MKS89_19920 PF06923 Glucitol operon activator protein (GutM) MKS89_19925 PF00106 short chain dehydrogenase MKS89_19930 PF03829 PTS system glucitol/sorbitol-specific IIA component MKS89_19935 PF07663 Sorbitol phosphotransferase enzyme II C-terminus MKS89_19935 PF03612 Sorbitol phosphotransferase enzyme II N-terminus MKS89_19940 PF03608 PTS system enzyme II sorbitol-specific factor MKS89_19945 PF00923 Transaldolase/Fructose-6-phosphate aldolase MKS89_19970 PF02931 Neurotransmitter-gated ion-channel ligand binding domain MKS89_19975 PF00282 Pyridoxal-dependent decarboxylase conserved domain MKS89_19980 PF12833 Helix-turn-helix domain MKS89_19985 PF00933 Glycosyl hydrolase family 3 N terminal domain MKS89_19985 PF01915 Glycosyl hydrolase family 3 C-terminal domain MKS89_19985 PF14310 Fibronectin type III-like domain MKS89_19990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKS89_19995 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_20000 PF00528 Binding-protein-dependent transport system inner membrane component MKS89_20000 PF12911 N-terminal TM domain of oligopeptide transport permease C MKS89_20005 PF00005 ABC transporter MKS89_20005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_20010 PF00005 ABC transporter MKS89_20010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKS89_20015 PF01447 Thermolysin metallopeptidase, catalytic domain MKS89_20015 PF02868 Thermolysin metallopeptidase, alpha-helical domain MKS89_20015 PF04151 Bacterial pre-peptidase C-terminal domain MKS89_20015 PF03413 Peptidase propeptide and YPEB domain MKS89_20015 PF07504 Fungalysin/Thermolysin Propeptide Motif MKS89_20030 PF00313 'Cold-shock' DNA-binding domain MKS89_20045 PF08019 Phosphoethanolamine transferase EptA/EptB MKS89_20045 PF00884 Sulfatase MKS89_20050 PF00005 ABC transporter MKS89_20055 PF02361 Cobalt transport protein MKS89_20060 PF02553 Cobalt transport protein component CbiN MKS89_20065 PF01891 Cobalt uptake substrate-specific transmembrane region MKS89_20070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_20075 PF06180 Cobalt chelatase (CbiK) MKS89_20080 PF02571 Precorrin-6x reductase CbiJ/CobK MKS89_20085 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_20090 PF01890 Cobalamin synthesis G C-terminus MKS89_20090 PF11761 Cobalamin biosynthesis central region MKS89_20090 PF11760 Cobalamin synthesis G N-terminal MKS89_20095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_20100 PF05175 Methyltransferase small domain MKS89_20105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_20110 PF01888 CbiD MKS89_20115 PF02570 Precorrin-8X methylmutase MKS89_20120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKS89_20130 PF00128 Alpha amylase, catalytic domain MKS89_20130 PF02806 Alpha amylase, C-terminal all-beta domain MKS89_20155 PF01048 Phosphorylase superfamily MKS89_20195 PF01497 Periplasmic binding protein MKS89_20200 PF01032 FecCD transport family MKS89_20205 PF01032 FecCD transport family MKS89_20210 PF00005 ABC transporter MKS89_20220 PF07715 TonB-dependent Receptor Plug Domain MKS89_20220 PF00593 TonB dependent receptor MKS89_20225 PF07859 alpha/beta hydrolase fold MKS89_20230 PF02567 Phenazine biosynthesis-like protein MKS89_20240 PF01810 LysE type translocator MKS89_20255 PF00696 Amino acid kinase family MKS89_20260 PF13520 Amino acid permease MKS89_20265 PF04371 Porphyromonas-type peptidyl-arginine deiminase MKS89_20270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKS89_20270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKS89_20275 PF07690 Major Facilitator Superfamily MKS89_20280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_20280 PF03466 LysR substrate binding domain MKS89_20285 PF00440 Bacterial regulatory proteins, tetR family MKS89_20290 PF13520 Amino acid permease MKS89_20310 PF00501 AMP-binding enzyme MKS89_20310 PF01553 Acyltransferase MKS89_20315 PF01738 Dienelactone hydrolase family MKS89_20330 PF05594 Haemagluttinin repeat MKS89_20330 PF15526 Novel toxin 21 MKS89_20330 PF05860 haemagglutination activity domain MKS89_20330 PF13332 Hemagglutinin repeat MKS89_20330 PF13332 Hemagglutinin repeat MKS89_20330 PF05860 haemagglutination activity domain MKS89_20330 PF15526 Novel toxin 21 MKS89_20330 PF04829 Pre-toxin domain with VENN motif MKS89_20330 PF04829 Pre-toxin domain with VENN motif MKS89_20330 PF05594 Haemagluttinin repeat MKS89_20335 PF08479 POTRA domain, ShlB-type MKS89_20335 PF17287 POTRA domain MKS89_20335 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB MKS89_20350 PF07715 TonB-dependent Receptor Plug Domain MKS89_20350 PF00593 TonB dependent receptor MKS89_20355 PF02311 AraC-like ligand binding domain MKS89_20355 PF12833 Helix-turn-helix domain MKS89_20375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKS89_20385 PF08502 LeuA allosteric (dimerisation) domain MKS89_20385 PF00682 HMGL-like MKS89_20400 PF14525 AraC-binding-like domain MKS89_20400 PF12833 Helix-turn-helix domain MKS89_20410 PF00939 Sodium:sulfate symporter transmembrane region MKS89_20430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_20430 PF03466 LysR substrate binding domain MKS89_20435 PF02652 L-lactate permease MKS89_20440 PF02754 Cysteine-rich domain MKS89_20445 PF11870 Domain of unknown function (DUF3390) MKS89_20445 PF13183 4Fe-4S dicluster domain MKS89_20445 PF02589 LUD domain MKS89_20450 PF02589 LUD domain MKS89_20460 PF01817 Chorismate mutase type II MKS89_20485 PF01930 Domain of unknown function DUF83 MKS89_20485 PF01867 CRISPR associated protein Cas1 MKS89_20490 PF09827 CRISPR associated protein Cas2 MKS89_20500 PF16473 3' exoribonuclease, RNase T-like MKS89_20530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MKS89_20530 PF13378 Enolase C-terminal domain-like MKS89_20535 PF07729 FCD domain MKS89_20535 PF00392 Bacterial regulatory proteins, gntR family MKS89_20540 PF00107 Zinc-binding dehydrogenase MKS89_20540 PF08240 Alcohol dehydrogenase GroES-like domain MKS89_20545 PF03480 Bacterial extracellular solute-binding protein, family 7 MKS89_20555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component MKS89_20565 PF06744 Type VI secretion protein IcmF C-terminal MKS89_20565 PF14331 ImcF-related N-terminal domain MKS89_20565 PF06761 Intracellular multiplication and human macrophage-killing MKS89_20580 PF02954 Bacterial regulatory protein, Fis family MKS89_20580 PF00158 Sigma-54 interaction domain MKS89_20585 PF10431 C-terminal, D2-small domain, of ClpB protein MKS89_20585 PF07724 AAA domain (Cdc48 subfamily) MKS89_20585 PF17871 AAA lid domain MKS89_20585 PF00004 ATPase family associated with various cellular activities (AAA) MKS89_20595 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE MKS89_20615 PF05947 Type VI secretion system, TssF MKS89_20625 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath MKS89_20645 PF00672 HAMP domain MKS89_20645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_20645 PF02203 Tar ligand binding domain homologue MKS89_20650 PF00356 Bacterial regulatory proteins, lacI family MKS89_20660 PF13183 4Fe-4S dicluster domain MKS89_20660 PF02754 Cysteine-rich domain MKS89_20665 PF00890 FAD binding domain MKS89_20670 PF04324 BFD-like [2Fe-2S] binding domain MKS89_20670 PF01266 FAD dependent oxidoreductase MKS89_20675 PF00230 Major intrinsic protein MKS89_20680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKS89_20680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKS89_20685 PF00005 ABC transporter MKS89_20690 PF01032 FecCD transport family MKS89_20695 PF01032 FecCD transport family MKS89_20700 PF01497 Periplasmic binding protein MKS89_20705 PF07715 TonB-dependent Receptor Plug Domain MKS89_20705 PF00593 TonB dependent receptor MKS89_20750 PF13673 Acetyltransferase (GNAT) domain MKS89_20750 PF04229 GrpB protein MKS89_20775 PF01320 Colicin immunity protein / pyocin immunity protein MKS89_20800 PF16841 Ca-dependent carbohydrate-binding module xylan-binding MKS89_20800 PF00457 Glycosyl hydrolases family 11 MKS89_20805 PF03422 Carbohydrate binding module (family 6) MKS89_20805 PF00553 Cellulose binding domain MKS89_20805 PF03664 Glycosyl hydrolase family 62 MKS89_20815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKS89_20815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKS89_20820 PF01177 Asp/Glu/Hydantoin racemase MKS89_20835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_20835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_20835 PF00874 PRD domain MKS89_20835 PF05043 Mga helix-turn-helix domain MKS89_20835 PF08279 HTH domain MKS89_20840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_20845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_20845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKS89_20845 PF02378 Phosphotransferase system, EIIC MKS89_20850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKS89_20855 PF01116 Fructose-bisphosphate aldolase class-II MKS89_20860 PF01116 Fructose-bisphosphate aldolase class-II MKS89_20865 PF00480 ROK family MKS89_20870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase MKS89_20875 PF03466 LysR substrate binding domain MKS89_20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKS89_20880 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MKS89_20885 PF02743 Cache domain MKS89_20885 PF00672 HAMP domain MKS89_20885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain MKS89_20890 PF00135 Carboxylesterase family