CU052_00025 SM00857 Resolvase, N terminal domain CU052_00160 SM00470 ParB-like nuclease domain CU052_00370 SM00530 Helix-turn-helix XRE-family like proteins CU052_00425 SM00382 ATPases associated with a variety of cellular activities CU052_00440 SM00849 Metallo-beta-lactamase superfamily CU052_00455 SM00382 ATPases associated with a variety of cellular activities CU052_00470 SM00487 DEAD-like helicases superfamily CU052_00470 SM00490 helicase superfamily c-terminal domain CU052_00470 SM00982 CU052_00470 CU052_00470 SM01058 CarD-like/TRCF domain CU052_00520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_00520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_00545 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_00565 SM00831 Cation transporter/ATPase, N-terminus CU052_00575 SM00062 Bacterial periplasmic substrate-binding proteins CU052_00575 SM00267 diguanylate cyclase CU052_00605 SM00344 helix_turn_helix ASNC type CU052_00775 SM00978 CU052_00775 CU052_00785 SM00563 Phosphate acyltransferases CU052_00820 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CU052_00850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_00925 SM00825 Beta-ketoacyl synthase CU052_00940 SM00382 ATPases associated with a variety of cellular activities CU052_00970 SM00823 Phosphopantetheine attachment site CU052_00970 SM00825 Beta-ketoacyl synthase CU052_00975 SM00823 Phosphopantetheine attachment site CU052_00985 SM00823 Phosphopantetheine attachment site CU052_00985 SM00825 Beta-ketoacyl synthase CU052_00985 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CU052_00990 SM00823 Phosphopantetheine attachment site CU052_00990 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CU052_01010 SM00825 Beta-ketoacyl synthase CU052_01015 SM00822 CU052_01015 CU052_01015 SM00823 Phosphopantetheine attachment site CU052_01015 SM00825 Beta-ketoacyl synthase CU052_01015 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CU052_01015 SM00829 Enoylreductase CU052_01025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_01035 SM01144 CU052_01035 CU052_01065 SM00411 bacterial (prokaryotic) histone like domain CU052_01070 SM00382 ATPases associated with a variety of cellular activities CU052_01070 SM00464 Found in ATP-dependent protease La (LON) CU052_01075 SM00382 ATPases associated with a variety of cellular activities CU052_01075 SM00994 ClpX C4-type zinc finger CU052_01075 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_01090 SM00387 Histidine kinase-like ATPases CU052_01090 SM00388 His Kinase A (phosphoacceptor) domain CU052_01095 SM00382 ATPases associated with a variety of cellular activities CU052_01095 SM00448 cheY-homologous receiver domain CU052_01125 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CU052_01140 SM00487 DEAD-like helicases superfamily CU052_01140 SM00490 helicase superfamily c-terminal domain CU052_01145 SM01091 Transporter associated domain CU052_01165 SM00823 Phosphopantetheine attachment site CU052_01225 SM00563 Phosphate acyltransferases CU052_01285 SM00825 Beta-ketoacyl synthase CU052_01295 SM00822 CU052_01295 CU052_01300 SM00825 Beta-ketoacyl synthase CU052_01365 SM00474 3'-5' exonuclease CU052_01395 SM00487 DEAD-like helicases superfamily CU052_01395 SM00491 CU052_01395 CU052_01415 SM00836 DALR anticodon binding domain CU052_01415 SM01016 Arginyl tRNA synthetase N terminal dom CU052_01435 SM00899 CU052_01435 CU052_01440 SM00342 helix_turn_helix, arabinose operon control protein CU052_01450 SM00382 ATPases associated with a variety of cellular activities CU052_01460 SM00881 CoA binding domain CU052_01475 SM00861 Transketolase, pyrimidine binding domain CU052_01595 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CU052_01620 SM00387 Histidine kinase-like ATPases CU052_01625 SM00862 Transcriptional regulatory protein, C terminal CU052_01655 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_01660 SM00938 Nitrogen regulatory protein P-II CU052_01695 SM00244 prohibitin homologues CU052_01730 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU052_01730 SM00292 breast cancer carboxy-terminal domain CU052_01730 SM00532 Ligase N family CU052_01735 SM00771 ZipA, C-terminal domain (FtsZ-binding) CU052_01795 SM00047 Lysozyme subfamily 2 CU052_01845 SM00138 Methyltransferase, chemotaxis proteins CU052_01850 SM00260 Two component signalling adaptor domain CU052_01850 SM00448 cheY-homologous receiver domain CU052_01855 SM00858 CU052_01855 CU052_01935 SM01081 Putative carbohydrate binding domain CU052_01965 SM00463 Small MutS-related domain CU052_01970 SM00363 S4 RNA-binding domain CU052_02005 SM00937 CU052_02005 CU052_02025 SM01400 CU052_02025 CU052_02150 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_02165 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_02165 SM01091 Transporter associated domain CU052_02220 SM00936 Penicillin-binding protein 5, C-terminal domain CU052_02235 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_02250 SM00862 Transcriptional regulatory protein, C terminal CU052_02260 SM00642 Alpha-amylase domain CU052_02270 SM00354 helix_turn _helix lactose operon repressor CU052_02280 SM00382 ATPases associated with a variety of cellular activities CU052_02280 SM00930 CU052_02280 CU052_02320 SM00028 Tetratricopeptide repeats CU052_02325 SM00267 diguanylate cyclase CU052_02335 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CU052_02335 SM00475 5'-3' exonuclease CU052_02340 SM00477 DNA/RNA non-specific endonuclease CU052_02340 SM00892 DNA/RNA non-specific endonuclease CU052_02365 SM00981 CU052_02365 CU052_02390 SM00861 Transketolase, pyrimidine binding domain CU052_02440 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CU052_02495 SM01211 CU052_02495 CU052_02500 SM00062 Bacterial periplasmic substrate-binding proteins CU052_02550 SM00271 DnaJ molecular chaperone homology domain CU052_02675 SM00342 helix_turn_helix, arabinose operon control protein CU052_02745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_02800 SM00382 ATPases associated with a variety of cellular activities CU052_02845 SM00495 Chitin-binding domain type 3 CU052_02860 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_02860 SM01240 CU052_02860 CU052_02875 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU052_02875 SM00267 diguanylate cyclase CU052_02885 SM00382 ATPases associated with a variety of cellular activities CU052_02890 SM00564 beta-propeller repeat CU052_02910 SM00530 Helix-turn-helix XRE-family like proteins CU052_02920 SM00562 CU052_02920 CU052_02945 SM00271 DnaJ molecular chaperone homology domain CU052_03000 SM01323 CU052_03000 CU052_03015 SM00020 Trypsin-like serine protease CU052_03025 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_03080 SM00382 ATPases associated with a variety of cellular activities CU052_03110 SM00091 PAS domain CU052_03110 SM00387 Histidine kinase-like ATPases CU052_03110 SM00388 His Kinase A (phosphoacceptor) domain CU052_03115 SM00448 cheY-homologous receiver domain CU052_03115 SM00862 Transcriptional regulatory protein, C terminal CU052_03200 SM00382 ATPases associated with a variety of cellular activities CU052_03200 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_03210 SM00363 S4 RNA-binding domain CU052_03220 SM00062 Bacterial periplasmic substrate-binding proteins CU052_03230 SM00830 Chorismate mutase type II CU052_03250 SM00382 ATPases associated with a variety of cellular activities CU052_03265 SM00830 Chorismate mutase type II CU052_03320 SM00448 cheY-homologous receiver domain CU052_03320 SM00850 LytTr DNA-binding domain CU052_03345 SM00904 Riboflavin kinase CU052_03360 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_03390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU052_03400 SM00927 DNA mismatch repair enzyme MutH CU052_03420 SM00382 ATPases associated with a variety of cellular activities CU052_03465 SM00487 DEAD-like helicases superfamily CU052_03465 SM00490 helicase superfamily c-terminal domain CU052_03495 SM00986 Uracil DNA glycosylase superfamily CU052_03495 SM00987 UreE urease accessory protein, C-terminal domain CU052_03505 SM00518 AP endonuclease family 2 CU052_03555 SM00448 cheY-homologous receiver domain CU052_03555 SM00862 Transcriptional regulatory protein, C terminal CU052_03565 SM00073 Histidine Phosphotransfer domain CU052_03565 SM00091 PAS domain CU052_03565 SM00387 Histidine kinase-like ATPases CU052_03565 SM00388 His Kinase A (phosphoacceptor) domain CU052_03565 SM00448 cheY-homologous receiver domain CU052_03575 SM00091 PAS domain CU052_03575 SM00267 diguanylate cyclase CU052_03665 SM00851 MGS-like domain CU052_03665 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CU052_03670 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CU052_03685 SM00957 SecA DEAD-like domain CU052_03685 SM00958 SecA preprotein cross-linking domain CU052_03695 SM00864 Tubulin/FtsZ family, GTPase domain CU052_03695 SM00865 Tubulin/FtsZ family, C-terminal domain CU052_03700 SM00842 Cell division protein FtsA CU052_03790 SM00749 bacterial OsmY and nodulation domain CU052_03855 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU052_03860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU052_03865 SM00434 DNA Topoisomerase IV CU052_03870 SM00387 Histidine kinase-like ATPases CU052_03870 SM00433 TopoisomeraseII CU052_03910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_03920 SM00880 CU052_03920 CU052_03920 SM01118 CU052_03920 CU052_03935 SM00287 Bacterial SH3 domain homologues CU052_03945 SM00382 ATPases associated with a variety of cellular activities CU052_03965 SM00905 Dihydroneopterin aldolase CU052_03970 SM01207 CU052_03970 CU052_03995 SM00400 zinc finger CU052_03995 SM00493 CU052_03995 CU052_03995 SM00766 DNA primase DnaG DnaB-binding CU052_04025 SM00563 Phosphate acyltransferases CU052_04050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_04050 SM00387 Histidine kinase-like ATPases CU052_04050 SM00388 His Kinase A (phosphoacceptor) domain CU052_04055 SM00448 cheY-homologous receiver domain CU052_04055 SM00862 Transcriptional regulatory protein, C terminal CU052_04075 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_04075 SM01134 CU052_04075 CU052_04090 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_04090 SM00895 CU052_04090 CU052_04125 SM00014 Acid phosphatase homologues CU052_04140 SM00917 LeuA allosteric (dimerisation) domain CU052_04145 SM01329 CU052_04145 CU052_04165 SM00271 DnaJ molecular chaperone homology domain CU052_04185 SM00650 Ribosomal RNA adenine dimethylases CU052_04270 SM00382 ATPases associated with a variety of cellular activities CU052_04350 SM00382 ATPases associated with a variety of cellular activities CU052_04405 SM00487 DEAD-like helicases superfamily CU052_04405 SM00490 helicase superfamily c-terminal domain CU052_04440 SM00662 RNA polymerases D CU052_04445 SM00363 S4 RNA-binding domain CU052_04445 SM01390 CU052_04445 CU052_04510 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CU052_04515 SM01374 CU052_04515 CU052_04535 SM00322 K homology RNA-binding domain CU052_04550 SM01382 CU052_04550 CU052_04550 SM01383 CU052_04550 CU052_04570 SM01403 CU052_04570 CU052_04585 SM00487 DEAD-like helicases superfamily CU052_04585 SM00490 helicase superfamily c-terminal domain CU052_04590 SM00354 helix_turn _helix lactose operon repressor CU052_04605 SM00382 ATPases associated with a variety of cellular activities CU052_04605 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_04715 SM00984 UDP binding domain CU052_04795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_04795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_04795 SM01049 CU052_04795 CU052_04825 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CU052_04825 SM01232 CU052_04825 CU052_04835 SM00672 Putative lipopolysaccharide-modifying enzyme. CU052_04960 SM00858 CU052_04960 CU052_05060 SM00862 Transcriptional regulatory protein, C terminal CU052_05085 SM00382 ATPases associated with a variety of cellular activities CU052_05090 SM00382 ATPases associated with a variety of cellular activities CU052_05145 SM00028 Tetratricopeptide repeats CU052_05150 SM00072 Guanylate kinase homologues. CU052_05155 SM01409 CU052_05155 CU052_05160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_05160 SM00954 Region found in RelA / SpoT proteins CU052_05170 SM00487 DEAD-like helicases superfamily CU052_05170 SM00490 helicase superfamily c-terminal domain CU052_05185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_05185 SM00387 Histidine kinase-like ATPases CU052_05185 SM00388 His Kinase A (phosphoacceptor) domain CU052_05190 SM00448 cheY-homologous receiver domain CU052_05190 SM00862 Transcriptional regulatory protein, C terminal CU052_05205 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_05205 SM00732 Likely ribonuclease with RNase H fold. CU052_05285 SM00382 ATPases associated with a variety of cellular activities CU052_05300 SM00363 S4 RNA-binding domain CU052_05345 SM00838 Elongation factor G C-terminus CU052_05355 SM01230 CU052_05355 CU052_05365 SM00091 PAS domain CU052_05365 SM00387 Histidine kinase-like ATPases CU052_05365 SM00388 His Kinase A (phosphoacceptor) domain CU052_05370 SM00382 ATPases associated with a variety of cellular activities CU052_05370 SM00448 cheY-homologous receiver domain CU052_05375 SM00052 Putative diguanylate phosphodiesterase CU052_05375 SM00267 diguanylate cyclase CU052_05375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_05385 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_05420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CU052_05420 SM00474 3'-5' exonuclease CU052_05420 SM00475 5'-3' exonuclease CU052_05420 SM00482 DNA polymerase A domain CU052_05435 SM01004 Delta-aminolevulinic acid dehydratase CU052_05485 SM00052 Putative diguanylate phosphodiesterase CU052_05485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CU052_05485 SM00091 PAS domain CU052_05485 SM00267 diguanylate cyclase CU052_05540 SM00052 Putative diguanylate phosphodiesterase CU052_05540 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CU052_05540 SM00091 PAS domain CU052_05540 SM00267 diguanylate cyclase CU052_05545 SM00344 helix_turn_helix ASNC type CU052_05585 SM00382 ATPases associated with a variety of cellular activities CU052_05595 SM00530 Helix-turn-helix XRE-family like proteins CU052_05645 SM00354 helix_turn _helix lactose operon repressor CU052_05650 SM00220 Serine/Threonine protein kinases, catalytic domain CU052_05695 SM00382 ATPases associated with a variety of cellular activities CU052_05850 SM00829 Enoylreductase CU052_05890 SM00642 Alpha-amylase domain CU052_05905 SM00387 Histidine kinase-like ATPases CU052_05905 SM00433 TopoisomeraseII CU052_05915 SM00480 DNA polymerase III beta subunit CU052_05920 SM00382 ATPases associated with a variety of cellular activities CU052_05920 SM00760 Bacterial dnaA protein helix-turn-helix domain CU052_05930 SM00062 Bacterial periplasmic substrate-binding proteins CU052_05930 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CU052_05940 SM00382 ATPases associated with a variety of cellular activities CU052_05955 SM01234 CU052_05955 CU052_05975 SM01228 CU052_05975 CU052_05990 SM00470 ParB-like nuclease domain CU052_06030 SM00382 ATPases associated with a variety of cellular activities CU052_06050 SM00062 Bacterial periplasmic substrate-binding proteins CU052_06115 SM00857 Resolvase, N terminal domain CU052_06170 SM00387 Histidine kinase-like ATPases CU052_06235 SM00267 diguanylate cyclase CU052_06245 SM00563 Phosphate acyltransferases CU052_06315 SM00257 Lysin motif CU052_06340 SM01001 AIR carboxylase CU052_06450 SM00876 Biotin and Thiamin Synthesis associated domain CU052_06515 SM00342 helix_turn_helix, arabinose operon control protein CU052_06525 SM00341 Helicase and RNase D C-terminal CU052_06525 SM00487 DEAD-like helicases superfamily CU052_06525 SM00490 helicase superfamily c-terminal domain CU052_06525 SM00956 CU052_06525 CU052_06550 SM00487 DEAD-like helicases superfamily CU052_06550 SM00490 helicase superfamily c-terminal domain CU052_06560 SM00357 Cold shock protein domain CU052_06560 SM00382 ATPases associated with a variety of cellular activities CU052_06560 SM00959 Rho termination factor, N-terminal domain CU052_06640 SM01219 CU052_06640 CU052_06680 SM01144 CU052_06680 CU052_06715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_06720 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU052_06785 SM00382 ATPases associated with a variety of cellular activities CU052_06785 SM00962 SRP54-type protein, GTPase domain CU052_06785 SM00963 SRP54-type protein, helical bundle domain CU052_06790 SM00382 ATPases associated with a variety of cellular activities CU052_06805 SM00450 Rhodanese Homology Domain CU052_06830 SM00563 Phosphate acyltransferases CU052_06890 SM00360 RNA recognition motif CU052_06975 SM00155 Phospholipase D. Active site motifs. CU052_07035 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CU052_07035 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CU052_07040 SM00649 Ribosomal protein L11/L12 CU052_07065 SM00663 RNA polymerase I subunit A N-terminus CU052_07095 SM00986 Uracil DNA glycosylase superfamily CU052_07095 SM00987 UreE urease accessory protein, C-terminal domain CU052_07115 SM00411 bacterial (prokaryotic) histone like domain CU052_07125 SM01209 CU052_07125 CU052_07125 SM01210 CU052_07125 CU052_07130 SM00798 AICARFT/IMPCHase bienzyme CU052_07130 SM00851 MGS-like domain CU052_07140 SM00422 helix_turn_helix, mercury resistance CU052_07145 SM00862 Transcriptional regulatory protein, C terminal CU052_07165 SM00829 Enoylreductase CU052_07195 SM00267 diguanylate cyclase CU052_07220 SM00878 Biotin carboxylase C-terminal domain CU052_07240 SM00479 CU052_07240 CU052_07255 SM00387 Histidine kinase-like ATPases CU052_07255 SM00388 His Kinase A (phosphoacceptor) domain CU052_07255 SM00448 cheY-homologous receiver domain CU052_07290 SM00421 helix_turn_helix, Lux Regulon CU052_07290 SM00448 cheY-homologous receiver domain CU052_07325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_07325 SM00387 Histidine kinase-like ATPases CU052_07325 SM00388 His Kinase A (phosphoacceptor) domain CU052_07330 SM00448 cheY-homologous receiver domain CU052_07330 SM00862 Transcriptional regulatory protein, C terminal CU052_07355 SM00883 Chaperonin 10 Kd subunit CU052_07380 SM00841 Elongation factor P, C-terminal CU052_07380 SM01185 CU052_07380 CU052_07440 SM00971 Serine acetyltransferase, N-terminal CU052_07455 SM00450 Rhodanese Homology Domain CU052_07470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_07470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_07490 SM00479 CU052_07490 CU052_07565 SM00257 Lysin motif CU052_07565 SM00646 CU052_07565 CU052_07570 SM00853 MutL C terminal dimerisation domain CU052_07570 SM01340 CU052_07570 CU052_07590 SM00244 prohibitin homologues CU052_07595 SM00244 prohibitin homologues CU052_07605 SM00788 Adenylosuccinate synthetase CU052_07615 SM00671 Sel1-like repeats. CU052_07635 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_07635 SM00357 Cold shock protein domain CU052_07635 SM00955 CU052_07635 CU052_07640 SM00967 RNA 2'-O ribose methyltransferase substrate binding CU052_07690 SM01150 CU052_07690 CU052_07695 SM00100 Cyclic nucleotide-monophosphate binding domain CU052_07695 SM00419 helix_turn_helix, cAMP Regulatory protein CU052_07720 SM00382 ATPases associated with a variety of cellular activities CU052_07765 SM00320 WD40 repeats CU052_07805 SM00838 Elongation factor G C-terminus CU052_07805 SM00889 Elongation factor G, domain IV CU052_07825 SM00919 Malic enzyme, NAD binding domain CU052_07825 SM01274 CU052_07825 CU052_07865 SM00859 Semialdehyde dehydrogenase, NAD binding domain CU052_07935 SM00965 Secretin and TonB N terminus short domain CU052_07990 SM01005 Alanine racemase, C-terminal domain CU052_08090 SM01018 B12 binding domain CU052_08125 SM00421 helix_turn_helix, Lux Regulon CU052_08135 SM00052 Putative diguanylate phosphodiesterase CU052_08135 SM00267 diguanylate cyclase CU052_08170 SM00965 Secretin and TonB N terminus short domain CU052_08180 SM00028 Tetratricopeptide repeats CU052_08185 SM00382 ATPases associated with a variety of cellular activities CU052_08255 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_08275 SM00670 Large family of predicted nucleotide-binding domains CU052_08280 SM00487 DEAD-like helicases superfamily CU052_08280 SM00490 helicase superfamily c-terminal domain CU052_08310 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_08310 SM00924 MgtE intracellular N domain CU052_08340 SM00382 ATPases associated with a variety of cellular activities CU052_08355 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_08365 SM00382 ATPases associated with a variety of cellular activities CU052_08400 SM00563 Phosphate acyltransferases CU052_08445 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_08485 SM00822 CU052_08485 CU052_08530 SM00354 helix_turn _helix lactose operon repressor CU052_08535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_08620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_08620 SM01049 CU052_08620 CU052_08670 SM00478 endonuclease III CU052_08670 SM00525 CU052_08670 CU052_08690 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_08705 SM01152 CU052_08705 CU052_08725 SM00382 ATPases associated with a variety of cellular activities CU052_08735 SM00732 Likely ribonuclease with RNase H fold. CU052_08765 SM00731 SprT homologues. CU052_08780 SM00861 Transketolase, pyrimidine binding domain CU052_08790 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU052_08930 SM00838 Elongation factor G C-terminus CU052_08940 SM00358 Double-stranded RNA binding motif CU052_08940 SM00535 Ribonuclease III family CU052_08965 SM00073 Histidine Phosphotransfer domain CU052_08965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_08965 SM00387 Histidine kinase-like ATPases CU052_08965 SM00388 His Kinase A (phosphoacceptor) domain CU052_08965 SM00448 cheY-homologous receiver domain CU052_08980 SM00954 Region found in RelA / SpoT proteins CU052_08995 SM01192 CU052_08995 CU052_08995 SM01193 CU052_08995 CU052_09030 SM00257 Lysin motif CU052_09040 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CU052_09040 SM00534 ATPase domain of DNA mismatch repair MUTS family CU052_09050 SM00382 ATPases associated with a variety of cellular activities CU052_09060 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CU052_09140 SM00829 Enoylreductase CU052_09170 SM01091 Transporter associated domain CU052_09180 SM00382 ATPases associated with a variety of cellular activities CU052_09180 SM00962 SRP54-type protein, GTPase domain CU052_09180 SM00963 SRP54-type protein, helical bundle domain CU052_09250 SM00644 CU052_09250 CU052_09255 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_09255 SM00895 CU052_09255 CU052_09285 SM00947 Carbonic anhydrase CU052_09295 SM00382 ATPases associated with a variety of cellular activities CU052_09350 SM00487 DEAD-like helicases superfamily CU052_09350 SM00490 helicase superfamily c-terminal domain CU052_09350 SM00847 Helicase associated domain (HA2) Add an annotation CU052_09380 SM00938 Nitrogen regulatory protein P-II CU052_09400 SM00382 ATPases associated with a variety of cellular activities CU052_09410 SM01068 Putative carbohydrate binding domain CU052_09430 SM00382 ATPases associated with a variety of cellular activities CU052_09435 SM00382 ATPases associated with a variety of cellular activities CU052_09455 SM00091 PAS domain CU052_09455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_09455 SM00387 Histidine kinase-like ATPases CU052_09455 SM00388 His Kinase A (phosphoacceptor) domain CU052_09455 SM00448 cheY-homologous receiver domain CU052_09525 SM01103 CU052_09525 CU052_09535 SM00382 ATPases associated with a variety of cellular activities CU052_09570 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_09590 SM01387 CU052_09590 CU052_09595 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_09595 SM00322 K homology RNA-binding domain CU052_09600 SM00028 Tetratricopeptide repeats CU052_09605 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_09625 SM00052 Putative diguanylate phosphodiesterase CU052_09625 SM00091 PAS domain CU052_09625 SM00267 diguanylate cyclase CU052_09655 SM00267 diguanylate cyclase CU052_09680 SM01133 CU052_09680 CU052_09685 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CU052_09715 SM00382 ATPases associated with a variety of cellular activities CU052_09720 SM00838 Elongation factor G C-terminus CU052_09720 SM00889 Elongation factor G, domain IV CU052_09740 SM00342 helix_turn_helix, arabinose operon control protein CU052_09760 SM00858 CU052_09760 CU052_09780 SM00382 ATPases associated with a variety of cellular activities CU052_09795 SM00028 Tetratricopeptide repeats CU052_09800 SM00327 von Willebrand factor (vWF) type A domain CU052_09840 SM01038 Beta galactosidase small chain CU052_09865 SM00354 helix_turn _helix lactose operon repressor CU052_09900 SM00354 helix_turn _helix lactose operon repressor CU052_09925 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_09925 SM01134 CU052_09925 CU052_10040 SM00925 MltA specific insert domain CU052_10135 SM00900 CU052_10135 CU052_10165 SM00267 diguanylate cyclase CU052_10165 SM00448 cheY-homologous receiver domain CU052_10175 SM00487 DEAD-like helicases superfamily CU052_10175 SM00490 helicase superfamily c-terminal domain CU052_10190 SM00495 Chitin-binding domain type 3 CU052_10190 SM00636 CU052_10190 CU052_10255 SM00849 Metallo-beta-lactamase superfamily CU052_10320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_10365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU052_10375 SM00935 Outer membrane protein (OmpH-like) CU052_10405 SM00481 DNA polymerase alpha chain like domain CU052_10415 SM00977 TilS substrate C-terminal domain CU052_10425 SM00938 Nitrogen regulatory protein P-II CU052_10440 SM00257 Lysin motif CU052_10445 SM00849 Metallo-beta-lactamase superfamily CU052_10460 SM00479 CU052_10460 CU052_10540 SM00028 Tetratricopeptide repeats CU052_10560 SM00487 DEAD-like helicases superfamily CU052_10590 SM00974 CU052_10590 CU052_10635 SM00382 ATPases associated with a variety of cellular activities CU052_10655 SM00382 ATPases associated with a variety of cellular activities CU052_10680 SM00923 MbtH-like protein CU052_10690 SM00823 Phosphopantetheine attachment site CU052_10700 SM00823 Phosphopantetheine attachment site CU052_10735 SM00382 ATPases associated with a variety of cellular activities CU052_10815 SM00857 Resolvase, N terminal domain CU052_10865 SM01130 CU052_10865 CU052_10920 SM00342 helix_turn_helix, arabinose operon control protein CU052_10980 SM00382 ATPases associated with a variety of cellular activities CU052_10985 SM00387 Histidine kinase-like ATPases CU052_10985 SM00388 His Kinase A (phosphoacceptor) domain CU052_10990 SM00382 ATPases associated with a variety of cellular activities CU052_10990 SM00448 cheY-homologous receiver domain CU052_11015 SM00382 ATPases associated with a variety of cellular activities CU052_11080 SM00382 ATPases associated with a variety of cellular activities CU052_11080 SM00962 SRP54-type protein, GTPase domain CU052_11095 SM00448 cheY-homologous receiver domain CU052_11105 SM00073 Histidine Phosphotransfer domain CU052_11105 SM00260 Two component signalling adaptor domain CU052_11105 SM00387 Histidine kinase-like ATPases CU052_11105 SM01231 CU052_11105 CU052_11110 SM00448 cheY-homologous receiver domain CU052_11120 SM00260 Two component signalling adaptor domain CU052_11125 SM00260 Two component signalling adaptor domain CU052_11135 SM00382 ATPases associated with a variety of cellular activities CU052_11220 SM00855 Phosphoglycerate mutase family CU052_11225 SM00463 Small MutS-related domain CU052_11265 SM00825 Beta-ketoacyl synthase CU052_11280 SM00859 Semialdehyde dehydrogenase, NAD binding domain CU052_11330 SM00448 cheY-homologous receiver domain CU052_11350 SM00382 ATPases associated with a variety of cellular activities CU052_11360 SM00493 CU052_11360 CU052_11425 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_11480 SM00257 Lysin motif CU052_11525 SM00098 Alkaline phosphatase homologues CU052_11550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_11550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_11565 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU052_11585 SM00870 CU052_11585 CU052_11605 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CU052_11605 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CU052_11605 SM00493 CU052_11605 CU052_11660 SM00859 Semialdehyde dehydrogenase, NAD binding domain CU052_11710 SM00479 CU052_11710 CU052_11730 SM00478 endonuclease III CU052_11730 SM00525 CU052_11730 CU052_11740 SM00900 CU052_11740 CU052_11775 SM00487 DEAD-like helicases superfamily CU052_11775 SM00490 helicase superfamily c-terminal domain CU052_11780 SM00382 ATPases associated with a variety of cellular activities CU052_11780 SM00448 cheY-homologous receiver domain CU052_11795 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_11800 SM00852 Probable molybdopterin binding domain CU052_11845 SM00382 ATPases associated with a variety of cellular activities CU052_11850 SM00382 ATPases associated with a variety of cellular activities CU052_11895 SM00382 ATPases associated with a variety of cellular activities CU052_11915 SM00267 diguanylate cyclase CU052_11940 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_11975 SM00226 Low molecular weight phosphatase family CU052_11990 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_11995 SM00363 S4 RNA-binding domain CU052_12025 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CU052_12030 SM00822 CU052_12030 CU052_12040 SM00825 Beta-ketoacyl synthase CU052_12115 SM00260 Two component signalling adaptor domain CU052_12115 SM00448 cheY-homologous receiver domain CU052_12120 SM00481 DNA polymerase alpha chain like domain CU052_12155 SM00822 CU052_12155 CU052_12170 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_12175 SM00411 bacterial (prokaryotic) histone like domain CU052_12185 SM00028 Tetratricopeptide repeats CU052_12190 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CU052_12305 SM00530 Helix-turn-helix XRE-family like proteins CU052_12345 SM00382 ATPases associated with a variety of cellular activities CU052_12360 SM00128 Inositol polyphosphate phosphatase, catalytic domain homologues CU052_12390 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_12425 SM00387 Histidine kinase-like ATPases CU052_12425 SM00388 His Kinase A (phosphoacceptor) domain CU052_12430 SM00448 cheY-homologous receiver domain CU052_12430 SM00862 Transcriptional regulatory protein, C terminal CU052_12520 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_12525 SM00052 Putative diguanylate phosphodiesterase CU052_12525 SM00091 PAS domain CU052_12575 SM00387 Histidine kinase-like ATPases CU052_12575 SM00388 His Kinase A (phosphoacceptor) domain CU052_12575 SM00448 cheY-homologous receiver domain CU052_12625 SM00481 DNA polymerase alpha chain like domain CU052_12640 SM00363 S4 RNA-binding domain CU052_12650 SM00841 Elongation factor P, C-terminal CU052_12650 SM01185 CU052_12650 CU052_12660 SM00486 DNA polymerase type-B family CU052_12665 SM00421 helix_turn_helix, Lux Regulon CU052_12665 SM00448 cheY-homologous receiver domain CU052_12670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU052_12670 SM00465 GIY-YIG type nucleases (URI domain) CU052_12730 SM00852 Probable molybdopterin binding domain CU052_12760 SM00434 DNA Topoisomerase IV CU052_12850 SM00849 Metallo-beta-lactamase superfamily CU052_12880 SM00387 Histidine kinase-like ATPases CU052_12880 SM01049 CU052_12880 CU052_12885 SM00421 helix_turn_helix, Lux Regulon CU052_12885 SM00448 cheY-homologous receiver domain CU052_12890 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_12900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_12900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_12905 SM00479 CU052_12905 CU052_12910 SM00100 Cyclic nucleotide-monophosphate binding domain CU052_12910 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_12925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_12965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_12965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_12975 SM00421 helix_turn_helix, Lux Regulon CU052_12985 SM00052 Putative diguanylate phosphodiesterase CU052_13010 SM00387 Histidine kinase-like ATPases CU052_13010 SM00388 His Kinase A (phosphoacceptor) domain CU052_13010 SM00448 cheY-homologous receiver domain CU052_13040 SM00091 PAS domain CU052_13040 SM00382 ATPases associated with a variety of cellular activities CU052_13200 SM00671 Sel1-like repeats. CU052_13255 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_13255 SM00866 CU052_13255 CU052_13270 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CU052_13365 SM00530 Helix-turn-helix XRE-family like proteins CU052_13575 SM00530 Helix-turn-helix XRE-family like proteins CU052_13600 SM00267 diguanylate cyclase CU052_13610 SM00873 B3/4 domain CU052_13610 SM00874 tRNA synthetase B5 domain CU052_13610 SM00896 Ferredoxin-fold anticodon binding domain CU052_13650 SM00411 bacterial (prokaryotic) histone like domain CU052_13685 SM00479 CU052_13685 CU052_13730 SM00903 Flavin reductase like domain CU052_13750 SM00855 Phosphoglycerate mutase family CU052_13770 SM00382 ATPases associated with a variety of cellular activities CU052_13865 SM00267 diguanylate cyclase CU052_13875 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_13875 SM00895 CU052_13875 CU052_13905 SM01130 CU052_13905 CU052_13910 SM00382 ATPases associated with a variety of cellular activities CU052_13955 SM00862 Transcriptional regulatory protein, C terminal CU052_13960 SM00448 cheY-homologous receiver domain CU052_13960 SM00862 Transcriptional regulatory protein, C terminal CU052_13965 SM00388 His Kinase A (phosphoacceptor) domain CU052_13970 SM00247 Beta/gamma crystallins CU052_13995 SM00382 ATPases associated with a variety of cellular activities CU052_14000 SM00382 ATPases associated with a variety of cellular activities CU052_14140 SM00448 cheY-homologous receiver domain CU052_14145 SM00091 PAS domain CU052_14145 SM00387 Histidine kinase-like ATPases CU052_14170 SM00764 Citrate lyase ligase C-terminal domain CU052_14205 SM00495 Chitin-binding domain type 3 CU052_14225 SM00382 ATPases associated with a variety of cellular activities CU052_14320 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_14465 SM00091 PAS domain CU052_14465 SM00387 Histidine kinase-like ATPases CU052_14470 SM00448 cheY-homologous receiver domain CU052_14480 SM00342 helix_turn_helix, arabinose operon control protein CU052_14480 SM00871 Bacterial transcription activator, effector binding domain CU052_14495 SM01350 CU052_14495 CU052_14530 SM00409 Immunoglobulin CU052_14530 SM00635 Bacterial Ig-like domain 2 CU052_14545 SM00857 Resolvase, N terminal domain CU052_14560 SM00052 Putative diguanylate phosphodiesterase CU052_14575 SM00342 helix_turn_helix, arabinose operon control protein CU052_14645 SM00327 von Willebrand factor (vWF) type A domain CU052_14665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CU052_14670 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_14690 SM00382 ATPases associated with a variety of cellular activities CU052_14705 SM00062 Bacterial periplasmic substrate-binding proteins CU052_14765 SM00382 ATPases associated with a variety of cellular activities CU052_14775 SM00945 ProQ/FINO family CU052_14780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU052_14780 SM00245 tail specific protease CU052_14820 SM00981 CU052_14820 CU052_14830 SM00382 ATPases associated with a variety of cellular activities CU052_14885 SM00387 Histidine kinase-like ATPases CU052_14885 SM00388 His Kinase A (phosphoacceptor) domain CU052_14885 SM00448 cheY-homologous receiver domain CU052_14890 SM00897 FIST N domain CU052_14890 SM01204 CU052_14890 CU052_14940 SM00100 Cyclic nucleotide-monophosphate binding domain CU052_14940 SM00419 helix_turn_helix, cAMP Regulatory protein CU052_14970 SM00382 ATPases associated with a variety of cellular activities CU052_15020 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU052_15055 SM00382 ATPases associated with a variety of cellular activities CU052_15075 SM00387 Histidine kinase-like ATPases CU052_15075 SM00388 His Kinase A (phosphoacceptor) domain CU052_15090 SM00382 ATPases associated with a variety of cellular activities CU052_15100 SM00852 Probable molybdopterin binding domain CU052_15115 SM01144 CU052_15115 CU052_15165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_15180 SM00267 diguanylate cyclase CU052_15185 SM00448 cheY-homologous receiver domain CU052_15245 SM00382 ATPases associated with a variety of cellular activities CU052_15245 SM00448 cheY-homologous receiver domain CU052_15305 SM01276 CU052_15305 CU052_15315 SM00327 von Willebrand factor (vWF) type A domain CU052_15335 SM00028 Tetratricopeptide repeats CU052_15335 SM00267 diguanylate cyclase CU052_15360 SM00020 Trypsin-like serine protease CU052_15360 SM00495 Chitin-binding domain type 3 CU052_15395 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_15395 SM00895 CU052_15395 CU052_15460 SM00382 ATPases associated with a variety of cellular activities CU052_15460 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_15495 SM00220 Serine/Threonine protein kinases, catalytic domain CU052_15500 SM00062 Bacterial periplasmic substrate-binding proteins CU052_15500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_15605 SM00421 helix_turn_helix, Lux Regulon CU052_15620 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_15675 SM00028 Tetratricopeptide repeats CU052_15680 SM00245 tail specific protease CU052_15700 SM00382 ATPases associated with a variety of cellular activities CU052_15700 SM00487 DEAD-like helicases superfamily CU052_15700 SM00490 helicase superfamily c-terminal domain CU052_15700 SM00847 Helicase associated domain (HA2) Add an annotation CU052_15730 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU052_15755 SM00479 CU052_15755 CU052_15760 SM00267 diguanylate cyclase CU052_15760 SM01079 CU052_15760 CU052_15815 SM00382 ATPases associated with a variety of cellular activities CU052_15820 SM00382 ATPases associated with a variety of cellular activities CU052_15850 SM00382 ATPases associated with a variety of cellular activities CU052_15880 SM00267 diguanylate cyclase CU052_15890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_15895 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CU052_15925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_15930 SM00052 Putative diguanylate phosphodiesterase CU052_15930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CU052_15930 SM00091 PAS domain CU052_15930 SM00267 diguanylate cyclase CU052_15935 SM00448 cheY-homologous receiver domain CU052_15940 SM00100 Cyclic nucleotide-monophosphate binding domain CU052_15940 SM00387 Histidine kinase-like ATPases CU052_15990 SM00487 DEAD-like helicases superfamily CU052_15990 SM00490 helicase superfamily c-terminal domain CU052_15995 SM00919 Malic enzyme, NAD binding domain CU052_15995 SM01274 CU052_15995 CU052_16010 SM00267 diguanylate cyclase CU052_16035 SM00382 ATPases associated with a variety of cellular activities CU052_16040 SM00382 ATPases associated with a variety of cellular activities CU052_16060 SM00530 Helix-turn-helix XRE-family like proteins CU052_16075 SM00267 diguanylate cyclase CU052_16095 SM00387 Histidine kinase-like ATPases CU052_16100 SM00448 cheY-homologous receiver domain CU052_16190 SM00382 ATPases associated with a variety of cellular activities CU052_16205 SM00354 helix_turn _helix lactose operon repressor CU052_16230 SM00363 S4 RNA-binding domain CU052_16235 SM00487 DEAD-like helicases superfamily CU052_16235 SM00490 helicase superfamily c-terminal domain CU052_16245 SM00448 cheY-homologous receiver domain CU052_16245 SM00862 Transcriptional regulatory protein, C terminal CU052_16250 SM00387 Histidine kinase-like ATPases CU052_16315 SM00421 helix_turn_helix, Lux Regulon CU052_16315 SM00448 cheY-homologous receiver domain CU052_16320 SM00387 Histidine kinase-like ATPases CU052_16320 SM00388 His Kinase A (phosphoacceptor) domain CU052_16325 SM00450 Rhodanese Homology Domain CU052_16355 SM00382 ATPases associated with a variety of cellular activities CU052_16365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU052_16365 SM00382 ATPases associated with a variety of cellular activities CU052_16390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_16390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_16400 SM00155 Phospholipase D. Active site motifs. CU052_16455 SM00382 ATPases associated with a variety of cellular activities CU052_16475 SM00382 ATPases associated with a variety of cellular activities CU052_16480 SM00382 ATPases associated with a variety of cellular activities CU052_16490 SM01131 CU052_16490 CU052_16505 SM00382 ATPases associated with a variety of cellular activities CU052_16575 SM00840 CU052_16575 CU052_16590 SM00052 Putative diguanylate phosphodiesterase CU052_16645 SM00528 Domain in histone-like proteins of HNS family CU052_16740 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_16740 SM00876 Biotin and Thiamin Synthesis associated domain CU052_16770 SM00382 ATPases associated with a variety of cellular activities CU052_16780 SM00843 CU052_16780 CU052_16785 SM00344 helix_turn_helix ASNC type CU052_16790 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CU052_16790 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CU052_16815 SM00857 Resolvase, N terminal domain CU052_17080 SM00382 ATPases associated with a variety of cellular activities CU052_17210 SM00342 helix_turn_helix, arabinose operon control protein CU052_17230 SM00382 ATPases associated with a variety of cellular activities CU052_17265 SM00487 DEAD-like helicases superfamily CU052_17395 SM00387 Histidine kinase-like ATPases CU052_17395 SM00388 His Kinase A (phosphoacceptor) domain CU052_17395 SM00448 cheY-homologous receiver domain CU052_17445 SM00342 helix_turn_helix, arabinose operon control protein CU052_17500 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_17505 SM00028 Tetratricopeptide repeats CU052_17560 SM00382 ATPases associated with a variety of cellular activities CU052_17565 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU052_17570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_17650 SM00448 cheY-homologous receiver domain CU052_17650 SM00862 Transcriptional regulatory protein, C terminal CU052_17660 SM00354 helix_turn _helix lactose operon repressor CU052_17695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CU052_17695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CU052_17695 SM00493 CU052_17695 CU052_17725 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_17730 SM00382 ATPases associated with a variety of cellular activities CU052_17730 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_17740 SM00357 Cold shock protein domain CU052_17765 SM00491 CU052_17765 CU052_17785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_17785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_17805 SM00062 Bacterial periplasmic substrate-binding proteins CU052_17805 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CU052_17810 SM00382 ATPases associated with a variety of cellular activities CU052_17860 SM00763 PrkA AAA domain CU052_17905 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_17905 SM01134 CU052_17905 CU052_17935 SM00861 Transketolase, pyrimidine binding domain CU052_17970 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_17970 SM01134 CU052_17970 CU052_17975 SM00354 helix_turn _helix lactose operon repressor CU052_18010 SM01060 CU052_18010 CU052_18015 SM00248 ankyrin repeats CU052_18060 SM00062 Bacterial periplasmic substrate-binding proteins CU052_18110 SM00382 ATPases associated with a variety of cellular activities CU052_18145 SM00838 Elongation factor G C-terminus CU052_18145 SM00889 Elongation factor G, domain IV CU052_18155 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CU052_18210 SM00382 ATPases associated with a variety of cellular activities CU052_18225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_18225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_18230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_18230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_18245 SM00587 ZnF_C4 abd HLH domain containing kinases domain CU052_18265 SM00226 Low molecular weight phosphatase family CU052_18265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_18280 SM00382 ATPases associated with a variety of cellular activities CU052_18305 SM00267 diguanylate cyclase CU052_18310 SM00028 Tetratricopeptide repeats CU052_18335 SM00422 helix_turn_helix, mercury resistance CU052_18345 SM00257 Lysin motif CU052_18355 SM00487 DEAD-like helicases superfamily CU052_18355 SM00490 helicase superfamily c-terminal domain CU052_18365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_18365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_18385 SM00382 ATPases associated with a variety of cellular activities CU052_18390 SM00267 diguanylate cyclase CU052_18400 SM00028 Tetratricopeptide repeats CU052_18400 SM00327 von Willebrand factor (vWF) type A domain CU052_18405 SM00327 von Willebrand factor (vWF) type A domain CU052_18425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_18425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_18435 SM00421 helix_turn_helix, Lux Regulon CU052_18440 SM00421 helix_turn_helix, Lux Regulon CU052_18450 SM00382 ATPases associated with a variety of cellular activities CU052_18460 SM01266 CU052_18460 CU052_18465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_18465 SM00448 cheY-homologous receiver domain CU052_18470 SM00387 Histidine kinase-like ATPases CU052_18470 SM00388 His Kinase A (phosphoacceptor) domain CU052_18500 SM00382 ATPases associated with a variety of cellular activities CU052_18550 SM00052 Putative diguanylate phosphodiesterase CU052_18555 SM00052 Putative diguanylate phosphodiesterase CU052_18565 SM00495 Chitin-binding domain type 3 CU052_18615 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU052_18635 SM01119 CU052_18635 CU052_18685 SM00382 ATPases associated with a variety of cellular activities CU052_18695 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_18700 SM00382 ATPases associated with a variety of cellular activities CU052_18730 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_18750 SM00260 Two component signalling adaptor domain CU052_18750 SM00448 cheY-homologous receiver domain CU052_18770 SM00642 Alpha-amylase domain CU052_18775 SM00829 Enoylreductase CU052_18805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_18860 SM00342 helix_turn_helix, arabinose operon control protein CU052_18875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_18905 SM00872 Alpha mannosidase, middle domain CU052_18915 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_18915 SM00866 CU052_18915 CU052_18945 SM00481 DNA polymerase alpha chain like domain CU052_18955 SM00530 Helix-turn-helix XRE-family like proteins CU052_18975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_18975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_19010 SM00052 Putative diguanylate phosphodiesterase CU052_19010 SM00267 diguanylate cyclase CU052_19070 SM00342 helix_turn_helix, arabinose operon control protein CU052_19150 SM00091 PAS domain CU052_19150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_19155 SM00861 Transketolase, pyrimidine binding domain CU052_19175 SM00636 CU052_19175 CU052_19180 SM00052 Putative diguanylate phosphodiesterase CU052_19180 SM00267 diguanylate cyclase CU052_19185 SM00450 Rhodanese Homology Domain CU052_19210 SM00852 Probable molybdopterin binding domain CU052_19260 SM00448 cheY-homologous receiver domain CU052_19275 SM01240 CU052_19275 CU052_19325 SM00382 ATPases associated with a variety of cellular activities CU052_19340 SM00028 Tetratricopeptide repeats CU052_19420 SM00267 diguanylate cyclase CU052_19460 SM00382 ATPases associated with a variety of cellular activities CU052_19475 SM00244 prohibitin homologues CU052_19485 SM00448 cheY-homologous receiver domain CU052_19490 SM00052 Putative diguanylate phosphodiesterase CU052_19490 SM00448 cheY-homologous receiver domain CU052_19505 SM00387 Histidine kinase-like ATPases CU052_19505 SM00388 His Kinase A (phosphoacceptor) domain CU052_19505 SM00448 cheY-homologous receiver domain CU052_19595 SM00382 ATPases associated with a variety of cellular activities CU052_19615 SM00354 helix_turn _helix lactose operon repressor CU052_19660 SM00382 ATPases associated with a variety of cellular activities CU052_19665 SM00422 helix_turn_helix, mercury resistance CU052_19715 SM00267 diguanylate cyclase CU052_19720 SM00487 DEAD-like helicases superfamily CU052_19720 SM00490 helicase superfamily c-terminal domain CU052_19735 SM00346 helix_turn_helix isocitrate lyase regulation CU052_19740 SM00052 Putative diguanylate phosphodiesterase CU052_19745 SM00382 ATPases associated with a variety of cellular activities CU052_19780 SM00382 ATPases associated with a variety of cellular activities CU052_19800 SM00530 Helix-turn-helix XRE-family like proteins CU052_19805 SM00857 Resolvase, N terminal domain CU052_19905 SM00342 helix_turn_helix, arabinose operon control protein CU052_19910 SM00316 Ribosomal protein S1-like RNA-binding domain CU052_19910 SM00357 Cold shock protein domain CU052_19910 SM00955 CU052_19910 CU052_19915 SM00487 DEAD-like helicases superfamily CU052_19915 SM00490 helicase superfamily c-terminal domain CU052_19920 SM00052 Putative diguanylate phosphodiesterase CU052_19920 SM00267 diguanylate cyclase CU052_19980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_19985 SM00382 ATPases associated with a variety of cellular activities CU052_19990 SM00062 Bacterial periplasmic substrate-binding proteins CU052_19990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CU052_20025 SM00900 CU052_20025 CU052_20040 SM00893 Electron transfer flavoprotein domain CU052_20045 SM00893 Electron transfer flavoprotein domain CU052_20055 SM00861 Transketolase, pyrimidine binding domain CU052_20110 SM00448 cheY-homologous receiver domain CU052_20110 SM00862 Transcriptional regulatory protein, C terminal CU052_20115 SM00388 His Kinase A (phosphoacceptor) domain CU052_20120 SM00871 Bacterial transcription activator, effector binding domain CU052_20125 SM00098 Alkaline phosphatase homologues CU052_20145 SM00028 Tetratricopeptide repeats CU052_20145 SM00267 diguanylate cyclase CU052_20160 SM00052 Putative diguanylate phosphodiesterase CU052_20170 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU052_20190 SM01012 CU052_20190 CU052_20210 SM00382 ATPases associated with a variety of cellular activities CU052_20245 SM00331 Sigma factor PP2C-like phosphatases CU052_20245 SM00448 cheY-homologous receiver domain CU052_20270 SM00636 CU052_20270 CU052_20280 SM00867 YceI-like domain CU052_20295 SM00388 His Kinase A (phosphoacceptor) domain CU052_20300 SM00448 cheY-homologous receiver domain CU052_20300 SM00862 Transcriptional regulatory protein, C terminal CU052_20305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_20305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_20315 SM01266 CU052_20315 CU052_20330 SM00267 diguanylate cyclase CU052_20330 SM01079 CU052_20330 CU052_20350 SM00342 helix_turn_helix, arabinose operon control protein CU052_20400 SM00710 Parallel beta-helix repeats CU052_20410 SM00849 Metallo-beta-lactamase superfamily CU052_20420 SM00704 CDGSH-type zinc finger. Function unknown. CU052_20430 SM00953 CU052_20430 CU052_20475 SM00448 cheY-homologous receiver domain CU052_20480 SM00220 Serine/Threonine protein kinases, catalytic domain CU052_20485 SM00240 Forkhead associated domain CU052_20515 SM00331 Sigma factor PP2C-like phosphatases CU052_20515 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CU052_20560 SM00382 ATPases associated with a variety of cellular activities CU052_20560 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_20665 SM00342 helix_turn_helix, arabinose operon control protein CU052_20700 SM00382 ATPases associated with a variety of cellular activities CU052_20740 SM00642 Alpha-amylase domain CU052_20795 SM00267 diguanylate cyclase CU052_20865 SM00342 helix_turn_helix, arabinose operon control protein CU052_20900 SM00342 helix_turn_helix, arabinose operon control protein CU052_20935 SM00387 Histidine kinase-like ATPases CU052_20940 SM00421 helix_turn_helix, Lux Regulon CU052_20940 SM00448 cheY-homologous receiver domain CU052_20950 SM00342 helix_turn_helix, arabinose operon control protein CU052_20975 SM00450 Rhodanese Homology Domain CU052_20980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_21015 SM00342 helix_turn_helix, arabinose operon control protein CU052_21055 SM00382 ATPases associated with a variety of cellular activities CU052_21065 SM00267 diguanylate cyclase CU052_21065 SM00448 cheY-homologous receiver domain CU052_21080 SM00267 diguanylate cyclase CU052_21095 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CU052_21095 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CU052_21105 SM00387 Histidine kinase-like ATPases CU052_21105 SM00388 His Kinase A (phosphoacceptor) domain CU052_21110 SM00448 cheY-homologous receiver domain CU052_21110 SM00862 Transcriptional regulatory protein, C terminal CU052_21175 SM00881 CoA binding domain CU052_21205 SM00091 PAS domain CU052_21205 SM00267 diguanylate cyclase CU052_21205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_21215 SM00796 Allophanate hydrolase subunit 1 CU052_21220 SM00797 Allophanate hydrolase subunit 2 CU052_21235 SM00382 ATPases associated with a variety of cellular activities CU052_21250 SM00052 Putative diguanylate phosphodiesterase CU052_21250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU052_21250 SM00267 diguanylate cyclase CU052_21260 SM00271 DnaJ molecular chaperone homology domain CU052_21325 SM00782 PhnA Zinc-Ribbon CU052_21375 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_21380 SM00867 YceI-like domain CU052_21400 SM00052 Putative diguanylate phosphodiesterase CU052_21405 SM00487 DEAD-like helicases superfamily CU052_21405 SM00490 helicase superfamily c-terminal domain CU052_21420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_21440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_21470 SM00495 Chitin-binding domain type 3 CU052_21470 SM00636 CU052_21470 CU052_21475 SM00342 helix_turn_helix, arabinose operon control protein CU052_21490 SM00382 ATPases associated with a variety of cellular activities CU052_21500 SM00062 Bacterial periplasmic substrate-binding proteins CU052_21500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CU052_21510 SM00052 Putative diguanylate phosphodiesterase CU052_21525 SM00354 helix_turn _helix lactose operon repressor CU052_21550 SM00862 Transcriptional regulatory protein, C terminal CU052_21590 SM00530 Helix-turn-helix XRE-family like proteins CU052_21710 SM00028 Tetratricopeptide repeats CU052_21715 SM00479 CU052_21715 CU052_21740 SM00382 ATPases associated with a variety of cellular activities CU052_21785 SM00014 Acid phosphatase homologues CU052_21825 SM00822 CU052_21825 CU052_21860 SM00422 helix_turn_helix, mercury resistance CU052_21890 SM00862 Transcriptional regulatory protein, C terminal CU052_21955 SM00260 Two component signalling adaptor domain CU052_21955 SM00448 cheY-homologous receiver domain CU052_21970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_21970 SM01358 CU052_21970 CU052_21975 SM00421 helix_turn_helix, Lux Regulon CU052_21975 SM00448 cheY-homologous receiver domain CU052_21985 SM00267 diguanylate cyclase CU052_21990 SM00421 helix_turn_helix, Lux Regulon CU052_21990 SM00448 cheY-homologous receiver domain CU052_21995 SM00052 Putative diguanylate phosphodiesterase CU052_21995 SM00448 cheY-homologous receiver domain CU052_22000 SM00062 Bacterial periplasmic substrate-binding proteins CU052_22000 SM00387 Histidine kinase-like ATPases CU052_22000 SM00388 His Kinase A (phosphoacceptor) domain CU052_22000 SM00448 cheY-homologous receiver domain CU052_22005 SM00267 diguanylate cyclase CU052_22005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_22020 SM00382 ATPases associated with a variety of cellular activities CU052_22090 SM00028 Tetratricopeptide repeats CU052_22125 SM00387 Histidine kinase-like ATPases CU052_22125 SM00448 cheY-homologous receiver domain CU052_22170 SM00990 CU052_22170 CU052_22175 SM00028 Tetratricopeptide repeats CU052_22205 SM00046 Diacylglycerol kinase catalytic domain (presumed) CU052_22225 SM00382 ATPases associated with a variety of cellular activities CU052_22275 SM00327 von Willebrand factor (vWF) type A domain CU052_22295 SM00028 Tetratricopeptide repeats CU052_22310 SM00448 cheY-homologous receiver domain CU052_22310 SM00862 Transcriptional regulatory protein, C terminal CU052_22315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_22315 SM00387 Histidine kinase-like ATPases CU052_22315 SM00388 His Kinase A (phosphoacceptor) domain CU052_22335 SM00073 Histidine Phosphotransfer domain CU052_22335 SM00387 Histidine kinase-like ATPases CU052_22335 SM00388 His Kinase A (phosphoacceptor) domain CU052_22335 SM00448 cheY-homologous receiver domain CU052_22345 SM00851 MGS-like domain CU052_22500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_22500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_22525 SM00448 cheY-homologous receiver domain CU052_22535 SM00382 ATPases associated with a variety of cellular activities CU052_22540 SM00382 ATPases associated with a variety of cellular activities CU052_22560 SM00382 ATPases associated with a variety of cellular activities CU052_22580 SM00062 Bacterial periplasmic substrate-binding proteins CU052_22580 SM00267 diguanylate cyclase CU052_22595 SM00357 Cold shock protein domain CU052_22600 SM01322 CU052_22600 CU052_22725 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_22725 SM01134 CU052_22725 CU052_22755 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_22775 SM00220 Serine/Threonine protein kinases, catalytic domain CU052_22800 SM00240 Forkhead associated domain CU052_22825 SM00382 ATPases associated with a variety of cellular activities CU052_22825 SM01086 C-terminal, D2-small domain, of ClpB protein CU052_22975 SM00635 Bacterial Ig-like domain 2 CU052_22980 SM00862 Transcriptional regulatory protein, C terminal CU052_22990 SM00470 ParB-like nuclease domain CU052_23095 SM00421 helix_turn_helix, Lux Regulon CU052_23110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_23110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_23110 SM01358 CU052_23110 CU052_23145 SM00421 helix_turn_helix, Lux Regulon CU052_23145 SM00448 cheY-homologous receiver domain CU052_23150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_23150 SM00387 Histidine kinase-like ATPases CU052_23165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU052_23205 SM00822 CU052_23205 CU052_23255 SM00344 helix_turn_helix ASNC type CU052_23270 SM00387 Histidine kinase-like ATPases CU052_23270 SM00388 His Kinase A (phosphoacceptor) domain CU052_23270 SM00448 cheY-homologous receiver domain CU052_23280 SM00465 GIY-YIG type nucleases (URI domain) CU052_23315 SM00387 Histidine kinase-like ATPases CU052_23315 SM00388 His Kinase A (phosphoacceptor) domain CU052_23315 SM00448 cheY-homologous receiver domain CU052_23320 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU052_23345 SM00344 helix_turn_helix ASNC type CU052_23355 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_23365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_23365 SM00387 Histidine kinase-like ATPases CU052_23365 SM00388 His Kinase A (phosphoacceptor) domain CU052_23370 SM00448 cheY-homologous receiver domain CU052_23370 SM00862 Transcriptional regulatory protein, C terminal CU052_23385 SM00342 helix_turn_helix, arabinose operon control protein CU052_23405 SM00924 MgtE intracellular N domain CU052_23430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_23435 SM00530 Helix-turn-helix XRE-family like proteins CU052_23445 SM00563 Phosphate acyltransferases CU052_23485 SM01065 Starch binding domain CU052_23500 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_23500 SM00895 CU052_23500 CU052_23520 SM00448 cheY-homologous receiver domain CU052_23520 SM00862 Transcriptional regulatory protein, C terminal CU052_23525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_23525 SM00387 Histidine kinase-like ATPases CU052_23525 SM00388 His Kinase A (phosphoacceptor) domain CU052_23550 SM00342 helix_turn_helix, arabinose operon control protein CU052_23665 SM00342 helix_turn_helix, arabinose operon control protein CU052_23745 SM00382 ATPases associated with a variety of cellular activities CU052_23800 SM01022 CU052_23800 CU052_23810 SM00829 Enoylreductase CU052_23820 SM01060 CU052_23820 CU052_23855 SM00342 helix_turn_helix, arabinose operon control protein CU052_23905 SM00849 Metallo-beta-lactamase superfamily CU052_23910 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU052_23910 SM00382 ATPases associated with a variety of cellular activities CU052_23930 SM00342 helix_turn_helix, arabinose operon control protein CU052_23930 SM00871 Bacterial transcription activator, effector binding domain CU052_23975 SM00487 DEAD-like helicases superfamily CU052_23975 SM00490 helicase superfamily c-terminal domain CU052_24070 SM00788 Adenylosuccinate synthetase CU052_24075 SM00052 Putative diguanylate phosphodiesterase CU052_24080 SM00870 CU052_24080 CU052_24100 SM00421 helix_turn_helix, Lux Regulon CU052_24110 SM00886 Stress responsive A/B Barrel Domain CU052_24160 SM00267 diguanylate cyclase CU052_24170 SM00421 helix_turn_helix, Lux Regulon CU052_24245 SM00155 Phospholipase D. Active site motifs. CU052_24270 SM00028 Tetratricopeptide repeats CU052_24280 SM00422 helix_turn_helix, mercury resistance CU052_24285 SM01057 Eukaryotic-type carbonic anhydrase CU052_24315 SM00829 Enoylreductase CU052_24325 SM00052 Putative diguanylate phosphodiesterase CU052_24325 SM00267 diguanylate cyclase CU052_24330 SM00062 Bacterial periplasmic substrate-binding proteins CU052_24340 SM00388 His Kinase A (phosphoacceptor) domain CU052_24345 SM00448 cheY-homologous receiver domain CU052_24345 SM00862 Transcriptional regulatory protein, C terminal CU052_24390 SM00481 DNA polymerase alpha chain like domain CU052_24410 SM00020 Trypsin-like serine protease CU052_24415 SM00052 Putative diguanylate phosphodiesterase CU052_24425 SM00382 ATPases associated with a variety of cellular activities CU052_24450 SM00382 ATPases associated with a variety of cellular activities CU052_24565 SM00342 helix_turn_helix, arabinose operon control protein CU052_24580 SM00062 Bacterial periplasmic substrate-binding proteins CU052_24595 SM00900 CU052_24595 CU052_24610 SM00382 ATPases associated with a variety of cellular activities CU052_24670 SM00862 Transcriptional regulatory protein, C terminal CU052_24765 SM00858 CU052_24765 CU052_24855 SM00631 CU052_24855 CU052_24890 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_24890 SM00866 CU052_24890 CU052_24900 SM00382 ATPases associated with a variety of cellular activities CU052_24925 SM00354 helix_turn _helix lactose operon repressor CU052_25035 SM01266 CU052_25035 CU052_25100 SM00267 diguanylate cyclase CU052_25110 SM00530 Helix-turn-helix XRE-family like proteins CU052_25115 SM00267 diguanylate cyclase CU052_25115 SM01079 CU052_25115 CU052_25220 SM00382 ATPases associated with a variety of cellular activities CU052_25220 SM00448 cheY-homologous receiver domain CU052_25225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CU052_25225 SM00387 Histidine kinase-like ATPases CU052_25245 SM00342 helix_turn_helix, arabinose operon control protein CU052_25290 SM00849 Metallo-beta-lactamase superfamily CU052_25335 SM00382 ATPases associated with a variety of cellular activities CU052_25410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_25410 SM00387 Histidine kinase-like ATPases CU052_25410 SM00388 His Kinase A (phosphoacceptor) domain CU052_25415 SM00448 cheY-homologous receiver domain CU052_25415 SM00862 Transcriptional regulatory protein, C terminal CU052_25505 SM00382 ATPases associated with a variety of cellular activities CU052_25535 SM00014 Acid phosphatase homologues CU052_25595 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_25620 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_25630 SM00642 Alpha-amylase domain CU052_25650 SM00642 Alpha-amylase domain CU052_25655 SM00267 diguanylate cyclase CU052_25690 SM00857 Resolvase, N terminal domain CU052_25740 SM00382 ATPases associated with a variety of cellular activities CU052_25795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_25795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_25815 SM00347 helix_turn_helix multiple antibiotic resistance protein CU052_25870 SM00996 S-adenosyl-L-homocysteine hydrolase CU052_25870 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CU052_25895 SM00642 Alpha-amylase domain CU052_25930 SM00342 helix_turn_helix, arabinose operon control protein CU052_25940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_25945 SM00829 Enoylreductase CU052_25955 SM00344 helix_turn_helix ASNC type CU052_25960 SM00342 helix_turn_helix, arabinose operon control protein CU052_25990 SM00487 DEAD-like helicases superfamily CU052_25990 SM00490 helicase superfamily c-terminal domain CU052_26020 SM00530 Helix-turn-helix XRE-family like proteins CU052_26030 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_26030 SM00895 CU052_26030 CU052_26125 SM00342 helix_turn_helix, arabinose operon control protein CU052_26180 SM00116 Domain in cystathionine beta-synthase and other proteins. CU052_26185 SM00479 CU052_26185 CU052_26195 SM00382 ATPases associated with a variety of cellular activities CU052_26205 SM00344 helix_turn_helix ASNC type CU052_26240 SM00360 RNA recognition motif CU052_26250 SM00422 helix_turn_helix, mercury resistance CU052_26270 SM00342 helix_turn_helix, arabinose operon control protein CU052_26275 SM00421 helix_turn_helix, Lux Regulon CU052_26285 SM00387 Histidine kinase-like ATPases CU052_26285 SM00388 His Kinase A (phosphoacceptor) domain CU052_26290 SM00448 cheY-homologous receiver domain CU052_26305 SM00052 Putative diguanylate phosphodiesterase CU052_26305 SM00267 diguanylate cyclase CU052_26310 SM00382 ATPases associated with a variety of cellular activities CU052_26370 SM00965 Secretin and TonB N terminus short domain CU052_26375 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CU052_26415 SM00470 ParB-like nuclease domain CU052_26435 SM00382 ATPases associated with a variety of cellular activities CU052_26440 SM00382 ATPases associated with a variety of cellular activities CU052_26460 SM00387 Histidine kinase-like ATPases CU052_26460 SM00388 His Kinase A (phosphoacceptor) domain CU052_26460 SM00448 cheY-homologous receiver domain CU052_26505 SM00382 ATPases associated with a variety of cellular activities CU052_26545 SM00387 Histidine kinase-like ATPases CU052_26550 SM00448 cheY-homologous receiver domain CU052_26550 SM00850 LytTr DNA-binding domain CU052_26565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CU052_26565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU052_26565 SM01049 CU052_26565 CU052_26600 SM00382 ATPases associated with a variety of cellular activities CU052_26605 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU052_26620 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_26620 SM01134 CU052_26620 CU052_26635 SM01007 Class II Aldolase and Adducin N-terminal domain CU052_26645 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CU052_26700 SM00342 helix_turn_helix, arabinose operon control protein CU052_26700 SM01009 AlkA N-terminal domain CU052_26725 SM00342 helix_turn_helix, arabinose operon control protein CU052_26740 SM00382 ATPases associated with a variety of cellular activities CU052_26750 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_26750 SM01134 CU052_26750 CU052_26755 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_26755 SM01134 CU052_26755 CU052_26860 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins CU052_26860 SM00495 Chitin-binding domain type 3 CU052_26860 SM00636 CU052_26860 CU052_26880 SM00267 diguanylate cyclase CU052_26890 SM00354 helix_turn _helix lactose operon repressor CU052_26915 SM00382 ATPases associated with a variety of cellular activities CU052_26920 SM00354 helix_turn _helix lactose operon repressor CU052_26935 SM01234 CU052_26935 CU052_26955 SM00267 diguanylate cyclase CU052_26980 SM00829 Enoylreductase CU052_27015 SM00344 helix_turn_helix ASNC type CU052_27020 SM00495 Chitin-binding domain type 3 CU052_27040 SM00342 helix_turn_helix, arabinose operon control protein CU052_27045 SM00052 Putative diguanylate phosphodiesterase CU052_27130 SM00342 helix_turn_helix, arabinose operon control protein CU052_27145 SM00382 ATPases associated with a variety of cellular activities CU052_27150 SM00382 ATPases associated with a variety of cellular activities CU052_27305 SM00642 Alpha-amylase domain CU052_27310 SM00671 Sel1-like repeats. CU052_27330 SM00966 SpoVT / AbrB like domain CU052_27345 SM00882 Coenzyme A transferase CU052_27350 SM00882 Coenzyme A transferase CU052_27460 SM00421 helix_turn_helix, Lux Regulon CU052_27485 SM00642 Alpha-amylase domain CU052_27495 SM00642 Alpha-amylase domain CU052_27595 SM00226 Low molecular weight phosphatase family CU052_27615 SM00420 helix_turn_helix, Deoxyribose operon repressor CU052_27615 SM01134 CU052_27615 CU052_27640 SM01007 Class II Aldolase and Adducin N-terminal domain CU052_27670 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CU052_27690 SM00450 Rhodanese Homology Domain CU052_27720 SM01234 CU052_27720 CU052_27735 SM00936 Penicillin-binding protein 5, C-terminal domain CU052_27740 SM00642 Alpha-amylase domain CU052_27745 SM00342 helix_turn_helix, arabinose operon control protein CU052_27875 SM00448 cheY-homologous receiver domain CU052_27875 SM00862 Transcriptional regulatory protein, C terminal CU052_27880 SM00387 Histidine kinase-like ATPases CU052_27880 SM00388 His Kinase A (phosphoacceptor) domain CU052_27985 SM00382 ATPases associated with a variety of cellular activities CU052_28010 SM00382 ATPases associated with a variety of cellular activities CU052_28045 SM00450 Rhodanese Homology Domain CU052_28095 SM00838 Elongation factor G C-terminus CU052_28095 SM00889 Elongation factor G, domain IV CU052_28130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU052_28170 SM00237 Domains in Na-Ca exchangers and integrin-beta4 CU052_28195 SM00857 Resolvase, N terminal domain CU052_28370 SM00318 Staphylococcal nuclease homologues CU052_28510 SM00729 Elongator protein 3, MiaB family, Radical SAM CU052_28580 SM00470 ParB-like nuclease domain CU052_28680 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CU052_28680 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CU052_28680 SM00493 CU052_28680 CU052_28790 SM00052 Putative diguanylate phosphodiesterase CU052_28855 SM00327 von Willebrand factor (vWF) type A domain CU052_28980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU052_29010 SM00778 Zinc-binding domain of primase-helicase CU052_29035 SM00530 Helix-turn-helix XRE-family like proteins