locus-tag class description LA59_00020 PF08240 Alcohol dehydrogenase GroES-like domain LA59_00020 PF00107 Zinc-binding dehydrogenase LA59_00025 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LA59_00025 PF01276 Orn/Lys/Arg decarboxylase, major domain LA59_00025 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LA59_00030 PF13520 Amino acid permease LA59_00040 PF18500 CadC C-terminal domain 1 LA59_00040 PF00486 Transcriptional regulatory protein, C terminal LA59_00045 PF13411 MerR HTH family regulatory protein LA59_00055 PF02142 MGS-like domain LA59_00055 PF01808 AICARFT/IMPCHase bienzyme LA59_00060 PF02843 Phosphoribosylglycinamide synthetase, C domain LA59_00060 PF02844 Phosphoribosylglycinamide synthetase, N domain LA59_00060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LA59_00070 PF00216 Bacterial DNA-binding protein LA59_00075 PF01595 Cyclin M transmembrane N-terminal domain LA59_00075 PF00571 CBS domain LA59_00080 PF04222 Protein of unknown function (DUF416) LA59_00085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_00090 PF03167 Uracil DNA glycosylase superfamily LA59_00095 PF01208 Uroporphyrinogen decarboxylase (URO-D) LA59_00110 PF00293 NUDIX domain LA59_00110 PF09297 NADH pyrophosphatase zinc ribbon domain LA59_00115 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ LA59_00120 PF04983 RNA polymerase Rpb1, domain 3 LA59_00120 PF04997 RNA polymerase Rpb1, domain 1 LA59_00120 PF05000 RNA polymerase Rpb1, domain 4 LA59_00120 PF04998 RNA polymerase Rpb1, domain 5 LA59_00120 PF00623 RNA polymerase Rpb1, domain 2 LA59_00125 PF10385 RNA polymerase beta subunit external 1 domain LA59_00125 PF04563 RNA polymerase beta subunit LA59_00125 PF04561 RNA polymerase Rpb2, domain 2 LA59_00125 PF04565 RNA polymerase Rpb2, domain 3 LA59_00125 PF04560 RNA polymerase Rpb2, domain 7 LA59_00125 PF00562 RNA polymerase Rpb2, domain 6 LA59_00130 PF00542 Ribosomal protein L7/L12 C-terminal domain LA59_00130 PF16320 Ribosomal protein L7/L12 dimerisation domain LA59_00135 PF00466 Ribosomal protein L10 LA59_00140 PF00687 Ribosomal protein L1p/L10e family LA59_00145 PF00298 Ribosomal protein L11, RNA binding domain LA59_00145 PF03946 Ribosomal protein L11, N-terminal domain LA59_00150 PF00467 KOW motif LA59_00150 PF02357 Transcription termination factor nusG LA59_00155 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LA59_00160 PF00009 Elongation factor Tu GTP binding domain LA59_00160 PF03143 Elongation factor Tu C-terminal domain LA59_00160 PF03144 Elongation factor Tu domain 2 LA59_00185 PF00485 Phosphoribulokinase / Uridine kinase family LA59_00190 PF02237 Biotin protein ligase C terminal domain LA59_00190 PF08279 HTH domain LA59_00190 PF03099 Biotin/lipoate A/B protein ligase family LA59_00195 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LA59_00195 PF01565 FAD binding domain LA59_00205 PF13091 PLD-like domain LA59_00280 PF01177 Asp/Glu/Hydantoin racemase LA59_00290 PF07715 TonB-dependent Receptor Plug Domain LA59_00290 PF00593 TonB dependent receptor LA59_00295 PF05958 tRNA (Uracil-5-)-methyltransferase LA59_00305 PF00440 Bacterial regulatory proteins, tetR family LA59_00310 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_00310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_00315 PF01554 MatE LA59_00325 PF00717 Peptidase S24-like LA59_00325 PF01726 LexA DNA binding domain LA59_00330 PF01553 Acyltransferase LA59_00335 PF01040 UbiA prenyltransferase family LA59_00340 PF04345 Chorismate lyase LA59_00345 PF03748 Flagellar basal body-associated protein FliL LA59_00350 PF01694 Rhomboid family LA59_00350 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LA59_00355 PF00581 Rhodanese-like domain LA59_00360 PF04542 Sigma-70 region 2 LA59_00360 PF00140 Sigma-70 factor, region 1.2 LA59_00360 PF04545 Sigma-70, region 4 LA59_00365 PF18075 FtsX extracellular domain LA59_00370 PF00005 ABC transporter LA59_00375 PF00448 SRP54-type protein, GTPase domain LA59_00375 PF02881 SRP54-type protein, helical bundle domain LA59_00390 PF01914 MarC family integral membrane protein LA59_00410 PF10694 Protein of unknown function (DUF2500) LA59_00435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_00435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_00440 PF01022 Bacterial regulatory protein, arsR family LA59_00445 PF08668 HDOD domain LA59_00445 PF00563 EAL domain LA59_00450 PF01810 LysE type translocator LA59_00455 PF12146 Serine aminopeptidase, S33 LA59_00480 PF10442 FIST C domain LA59_00480 PF00990 Diguanylate cyclase, GGDEF domain LA59_00480 PF08495 FIST N domain LA59_00480 PF00563 EAL domain LA59_00485 PF13419 Haloacid dehalogenase-like hydrolase LA59_00490 PF02899 Phage integrase, N-terminal SAM-like domain LA59_00490 PF00589 Phage integrase family LA59_00500 PF01678 Diaminopimelate epimerase LA59_00505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA59_00505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA59_00515 PF01491 Frataxin-like domain LA59_00520 PF12633 Adenylate cyclase NT domain LA59_00520 PF01295 Adenylate cyclase, class-I LA59_00525 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LA59_00525 PF03900 Porphobilinogen deaminase, C-terminal domain LA59_00530 PF02602 Uroporphyrinogen-III synthase HemD LA59_00535 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase LA59_00540 PF07219 HemY protein N-terminus LA59_00575 PF00175 Oxidoreductase NAD-binding domain LA59_00580 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_00585 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LA59_00595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_00595 PF07498 Rho termination factor, N-terminal domain LA59_00595 PF07497 Rho termination factor, RNA-binding domain LA59_00600 PF00085 Thioredoxin LA59_00605 PF00270 DEAD/DEAH box helicase LA59_00605 PF00271 Helicase conserved C-terminal domain LA59_00610 PF02541 Ppx/GppA phosphatase family LA59_00615 PF02592 Putative vitamin uptake transporter LA59_00625 PF09382 RQC domain LA59_00625 PF00570 HRDC domain LA59_00625 PF00271 Helicase conserved C-terminal domain LA59_00625 PF16124 RecQ zinc-binding LA59_00625 PF00270 DEAD/DEAH box helicase LA59_00630 PF00892 EamA-like transporter family LA59_00640 PF01810 LysE type translocator LA59_00650 PF00580 UvrD/REP helicase N-terminal domain LA59_00650 PF13361 UvrD-like helicase C-terminal domain LA59_00660 PF05114 Protein of unknown function (DUF692) LA59_00680 PF07690 Major Facilitator Superfamily LA59_00685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_00685 PF03466 LysR substrate binding domain LA59_00690 PF00557 Metallopeptidase family M24 LA59_00690 PF01321 Creatinase/Prolidase N-terminal domain LA59_00690 PF00557 Metallopeptidase family M24 LA59_00690 PF01321 Creatinase/Prolidase N-terminal domain LA59_00695 PF04055 Radical SAM superfamily LA59_00695 PF06968 Biotin and Thiamin Synthesis associated domain LA59_00700 PF05690 Thiazole biosynthesis protein ThiG LA59_00705 PF02597 ThiS family LA59_00710 PF00899 ThiF family LA59_00715 PF02581 Thiamine monophosphate synthase LA59_00720 PF01964 Radical SAM ThiC family LA59_00720 PF13667 ThiC-associated domain LA59_00725 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LA59_00730 PF00394 Multicopper oxidase LA59_00730 PF07731 Multicopper oxidase LA59_00730 PF07732 Multicopper oxidase LA59_00770 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_00780 PF01488 Shikimate / quinate 5-dehydrogenase LA59_00780 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LA59_00780 PF08501 Shikimate dehydrogenase substrate binding domain LA59_00785 PF01218 Coproporphyrinogen III oxidase LA59_00790 PF01300 Telomere recombination LA59_00795 PF00731 AIR carboxylase LA59_00800 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LA59_00800 PF02222 ATP-grasp domain LA59_00805 PF01396 Topoisomerase DNA binding C4 zinc finger LA59_00810 PF04361 Protein of unknown function (DUF494) LA59_00815 PF02481 DNA recombination-mediator protein A LA59_00815 PF17782 DprA winged helix domain LA59_00825 PF01327 Polypeptide deformylase LA59_00830 PF02911 Formyl transferase, C-terminal domain LA59_00830 PF00551 Formyl transferase LA59_00835 PF01189 16S rRNA methyltransferase RsmB/F LA59_00835 PF01029 NusB family LA59_00840 PF02080 TrkA-C domain LA59_00840 PF02254 TrkA-N domain LA59_00845 PF02386 Cation transport protein LA59_00855 PF03006 Haemolysin-III related LA59_00860 PF07070 SpoOM protein LA59_00865 PF06288 Protein of unknown function (DUF1040) LA59_00870 PF12801 4Fe-4S binding domain LA59_00870 PF13746 4Fe-4S dicluster domain LA59_00870 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LA59_00875 PF01636 Phosphotransferase enzyme family LA59_00880 PF01323 DSBA-like thioredoxin domain LA59_00895 PF00990 Diguanylate cyclase, GGDEF domain LA59_00895 PF08448 PAS fold LA59_00900 PF01078 Magnesium chelatase, subunit ChlI LA59_00900 PF13335 Magnesium chelatase, subunit ChlI C-terminal LA59_00905 PF00205 Thiamine pyrophosphate enzyme, central domain LA59_00905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_00905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_00915 PF01063 Amino-transferase class IV LA59_00920 PF00920 Dehydratase family LA59_00925 PF00291 Pyridoxal-phosphate dependent enzyme LA59_00925 PF00585 C-terminal regulatory domain of Threonine dehydratase LA59_00930 PF03466 LysR substrate binding domain LA59_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_00935 PF07690 Major Facilitator Superfamily LA59_00940 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_00945 PF00528 Binding-protein-dependent transport system inner membrane component LA59_00950 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_00950 PF12804 MobA-like NTP transferase domain LA59_00955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LA59_00955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LA59_00960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_00960 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_00965 PF00231 ATP synthase LA59_00970 PF00306 ATP synthase alpha/beta chain, C terminal domain LA59_00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_00975 PF00213 ATP synthase delta (OSCP) subunit LA59_00980 PF00430 ATP synthase B/B' CF(0) LA59_00985 PF00137 ATP synthase subunit C LA59_00990 PF00119 ATP synthase A chain LA59_00995 PF03899 ATP synthase I chain LA59_01000 PF17762 HTH domain found in ParB protein LA59_01000 PF02195 ParB-like nuclease domain LA59_01005 PF13614 AAA domain LA59_01010 PF02527 rRNA small subunit methyltransferase G LA59_01015 PF13932 GidA associated domain LA59_01015 PF01134 Glucose inhibited division protein A LA59_01020 PF00258 Flavodoxin LA59_01025 PF01926 50S ribosome-binding GTPase LA59_01025 PF10396 GTP-binding protein TrmE N-terminus LA59_01025 PF12631 MnmE helical domain LA59_01030 PF02096 60Kd inner membrane protein LA59_01030 PF14849 YidC periplasmic domain LA59_01035 PF00825 Ribonuclease P LA59_01040 PF00468 Ribosomal protein L34 LA59_01045 PF00005 ABC transporter LA59_01050 PF00528 Binding-protein-dependent transport system inner membrane component LA59_01055 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_01060 PF11638 DnaA N-terminal domain LA59_01060 PF08299 Bacterial dnaA protein helix-turn-helix LA59_01060 PF00308 Bacterial dnaA protein LA59_01065 PF00712 DNA polymerase III beta subunit, N-terminal domain LA59_01065 PF02767 DNA polymerase III beta subunit, central domain LA59_01065 PF02768 DNA polymerase III beta subunit, C-terminal domain LA59_01070 PF02463 RecF/RecN/SMC N terminal domain LA59_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_01075 PF18053 DNA gyrase B subunit insert domain LA59_01075 PF01751 Toprim domain LA59_01075 PF00204 DNA gyrase B LA59_01075 PF00986 DNA gyrase B subunit, carboxyl terminus LA59_01080 PF00011 Hsp20/alpha crystallin family LA59_01085 PF00155 Aminotransferase class I and II LA59_01090 PF00128 Alpha amylase, catalytic domain LA59_01095 PF02092 Glycyl-tRNA synthetase beta subunit LA59_01095 PF05746 DALR anticodon binding domain LA59_01100 PF02091 Glycyl-tRNA synthetase alpha subunit LA59_01105 PF01169 Uncharacterized protein family UPF0016 LA59_01115 PF01206 Sulfurtransferase TusA LA59_01125 PF03466 LysR substrate binding domain LA59_01125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_01130 PF08240 Alcohol dehydrogenase GroES-like domain LA59_01130 PF00107 Zinc-binding dehydrogenase LA59_01135 PF00108 Thiolase, N-terminal domain LA59_01135 PF02803 Thiolase, C-terminal domain LA59_01140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA59_01140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA59_01140 PF00378 Enoyl-CoA hydratase/isomerase LA59_01145 PF01205 Uncharacterized protein family UPF0029 LA59_01145 PF09186 Domain of unknown function (DUF1949) LA59_01150 PF02386 Cation transport protein LA59_01155 PF12724 Flavodoxin domain LA59_01200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_01200 PF03466 LysR substrate binding domain LA59_01205 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LA59_01205 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LA59_01210 PF04380 Membrane fusogenic activity LA59_01215 PF00873 AcrB/AcrD/AcrF family LA59_01220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_01225 PF08359 YsiA-like protein, C-terminal region LA59_01225 PF00440 Bacterial regulatory proteins, tetR family LA59_01230 PF13361 UvrD-like helicase C-terminal domain LA59_01230 PF00580 UvrD/REP helicase N-terminal domain LA59_01235 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_01275 PF00005 ABC transporter LA59_01275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_01280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_01290 PF00528 Binding-protein-dependent transport system inner membrane component LA59_01290 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_01320 PF00069 Protein kinase domain LA59_01325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_01325 PF00356 Bacterial regulatory proteins, lacI family LA59_01330 PF03466 LysR substrate binding domain LA59_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_01335 PF00893 Small Multidrug Resistance protein LA59_01340 PF00893 Small Multidrug Resistance protein LA59_01350 PF00920 Dehydratase family LA59_01355 PF01202 Shikimate kinase LA59_01360 PF02447 GntP family permease LA59_01365 PF01081 KDPG and KHG aldolase LA59_01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_01370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_01380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LA59_01385 PF01432 Peptidase family M3 LA59_01390 PF01037 Lrp/AsnC ligand binding domain LA59_01395 PF00990 Diguanylate cyclase, GGDEF domain LA59_01395 PF08448 PAS fold LA59_01395 PF00563 EAL domain LA59_01400 PF04445 Putative SAM-dependent methyltransferase LA59_01410 PF00892 EamA-like transporter family LA59_01415 PF00582 Universal stress protein family LA59_01420 PF00210 Ferritin-like domain LA59_01425 PF10625 Universal stress protein B (UspB) LA59_01440 PF03707 Bacterial signalling protein N terminal repeat LA59_01440 PF00990 Diguanylate cyclase, GGDEF domain LA59_01440 PF00563 EAL domain LA59_01450 PF02646 RmuC family LA59_01455 PF01209 ubiE/COQ5 methyltransferase family LA59_01460 PF02036 SCP-2 sterol transfer family LA59_01465 PF03109 ABC1 family LA59_01470 PF02416 mttA/Hcf106 family LA59_01475 PF02416 mttA/Hcf106 family LA59_01480 PF00902 Sec-independent protein translocase protein (TatC) LA59_01485 PF01026 TatD related DNase LA59_01490 PF00490 Delta-aminolevulinic acid dehydratase LA59_01500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA59_01500 PF01367 5'-3' exonuclease, C-terminal SAM fold LA59_01500 PF00476 DNA polymerase family A LA59_01500 PF01612 3'-5' exonuclease LA59_01505 PF01926 50S ribosome-binding GTPase LA59_01510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_01520 PF04220 Der GTPase activator (YihI) LA59_01530 PF04055 Radical SAM superfamily LA59_01530 PF06969 HemN C-terminal domain LA59_01535 PF00962 Adenosine/AMP deaminase LA59_01540 PF03707 Bacterial signalling protein N terminal repeat LA59_01540 PF00563 EAL domain LA59_01540 PF00990 Diguanylate cyclase, GGDEF domain LA59_01545 PF02954 Bacterial regulatory protein, Fis family LA59_01545 PF00072 Response regulator receiver domain LA59_01545 PF00158 Sigma-54 interaction domain LA59_01550 PF00989 PAS fold LA59_01550 PF00512 His Kinase A (phospho-acceptor) domain LA59_01550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_01560 PF03951 Glutamine synthetase, beta-Grasp domain LA59_01560 PF00120 Glutamine synthetase, catalytic domain LA59_01580 PF03631 Virulence factor BrkB LA59_01585 PF02580 D-Tyr-tRNA(Tyr) deacylase LA59_01590 PF09500 Putative thioesterase (yiiD_Cterm) LA59_01590 PF00583 Acetyltransferase (GNAT) family LA59_01600 PF01293 Phosphoenolpyruvate carboxykinase LA59_01605 PF01430 Hsp33 protein LA59_01610 PF01479 S4 domain LA59_01615 PF11356 Type II secretion system protein C LA59_01620 PF03958 Bacterial type II/III secretion system short domain LA59_01620 PF00263 Bacterial type II and III secretion system protein LA59_01625 PF00437 Type II/IV secretion system protein LA59_01630 PF00482 Type II secretion system (T2SS), protein F LA59_01635 PF07963 Prokaryotic N-terminal methylation motif LA59_01635 PF08334 Type II secretion system (T2SS), protein G LA59_01640 PF12019 Type II transport protein GspH LA59_01645 PF02501 Type II secretion system (T2SS), protein I LA59_01645 PF07963 Prokaryotic N-terminal methylation motif LA59_01650 PF07963 Prokaryotic N-terminal methylation motif LA59_01650 PF11612 Type II secretion system (T2SS), protein J LA59_01655 PF03934 Type II secretion system (T2SS), protein K LA59_01660 PF05134 Type II secretion system (T2SS), protein L LA59_01660 PF12693 GspL periplasmic domain LA59_01665 PF04612 Type II secretion system (T2SS), protein M LA59_01670 PF01203 Type II secretion system (T2SS), protein N LA59_01675 PF00459 Inositol monophosphatase family LA59_01680 PF00293 NUDIX domain LA59_01685 PF01106 NifU-like domain LA59_01685 PF01521 Iron-sulphur cluster biosynthesis LA59_01690 PF00156 Phosphoribosyl transferase domain LA59_01695 PF00561 alpha/beta hydrolase fold LA59_01705 PF16921 Tex protein YqgF-like domain LA59_01705 PF00575 S1 RNA binding domain LA59_01705 PF17674 HHH domain LA59_01705 PF09371 Tex-like protein N-terminal domain LA59_01715 PF01272 Transcription elongation factor, GreA/GreB, C-term LA59_01715 PF03449 Transcription elongation factor, N-terminal LA59_01720 PF00486 Transcriptional regulatory protein, C terminal LA59_01720 PF00072 Response regulator receiver domain LA59_01725 PF00672 HAMP domain LA59_01725 PF00512 His Kinase A (phospho-acceptor) domain LA59_01725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_01730 PF00860 Permease family LA59_01735 PF00326 Prolyl oligopeptidase family LA59_01740 PF17191 RecG wedge domain LA59_01740 PF00271 Helicase conserved C-terminal domain LA59_01740 PF00270 DEAD/DEAH box helicase LA59_01745 PF12105 SpoU, rRNA methylase, C-terminal LA59_01745 PF00588 SpoU rRNA Methylase family LA59_01750 PF02824 TGS domain LA59_01750 PF13291 ACT domain LA59_01750 PF04607 Region found in RelA / SpoT proteins LA59_01755 PF01192 RNA polymerase Rpb6 LA59_01760 PF00625 Guanylate kinase LA59_01775 PF02472 Biopolymer transport protein ExbD/TolR LA59_01780 PF01618 MotA/TolQ/ExbB proton channel family LA59_01795 PF00593 TonB dependent receptor LA59_01795 PF07715 TonB-dependent Receptor Plug Domain LA59_01800 PF00528 Binding-protein-dependent transport system inner membrane component LA59_01805 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_01805 PF00528 Binding-protein-dependent transport system inner membrane component LA59_01810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_01835 PF00892 EamA-like transporter family LA59_01845 PF00072 Response regulator receiver domain LA59_01845 PF00486 Transcriptional regulatory protein, C terminal LA59_01850 PF08340 Domain of unknown function (DUF1732) LA59_01850 PF03755 YicC-like family, N-terminal region LA59_01855 PF01138 3' exoribonuclease family, domain 1 LA59_01855 PF03725 3' exoribonuclease family, domain 2 LA59_01865 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_01870 PF00440 Bacterial regulatory proteins, tetR family LA59_01875 PF04127 DNA / pantothenate metabolism flavoprotein LA59_01875 PF02441 Flavoprotein LA59_01880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_01880 PF00672 HAMP domain LA59_01880 PF02743 Cache domain LA59_01885 PF04002 RadC-like JAB domain LA59_01890 PF00830 Ribosomal L28 family LA59_01895 PF00471 Ribosomal protein L33 LA59_01900 PF00884 Sulfatase LA59_01910 PF06827 Zinc finger found in FPG and IleRS LA59_01910 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LA59_01910 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LA59_01915 PF01467 Cytidylyltransferase-like LA59_01920 PF05686 Glycosyl transferase family 90 LA59_01925 PF00535 Glycosyl transferase family 2 LA59_01930 PF00535 Glycosyl transferase family 2 LA59_01935 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LA59_01940 PF01219 Prokaryotic diacylglycerol kinase LA59_01950 PF16363 GDP-mannose 4,6 dehydratase LA59_01955 PF00483 Nucleotidyl transferase LA59_01965 PF08889 WbqC-like protein family LA59_01970 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_01980 PF02719 Polysaccharide biosynthesis protein LA59_01985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_01990 PF02350 UDP-N-acetylglucosamine 2-epimerase LA59_01995 PF03102 NeuB family LA59_01995 PF08666 SAF domain LA59_02005 PF00483 Nucleotidyl transferase LA59_02010 PF13472 GDSL-like Lipase/Acylhydrolase family LA59_02010 PF02348 Cytidylyltransferase LA59_02020 PF00202 Aminotransferase class-III LA59_02025 PF00795 Carbon-nitrogen hydrolase LA59_02045 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LA59_02050 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LA59_02055 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_02060 PF01370 NAD dependent epimerase/dehydratase family LA59_02065 PF06082 Exopolysaccharide biosynthesis protein YbjH LA59_02110 PF00483 Nucleotidyl transferase LA59_02115 PF16363 GDP-mannose 4,6 dehydratase LA59_02125 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LA59_02135 PF00535 Glycosyl transferase family 2 LA59_02150 PF13439 Glycosyltransferase Family 4 LA59_02150 PF00534 Glycosyl transferases group 1 LA59_02155 PF00535 Glycosyl transferase family 2 LA59_02160 PF00793 DAHP synthetase I family LA59_02165 PF02348 Cytidylyltransferase LA59_02170 PF00571 CBS domain LA59_02170 PF01380 SIS domain LA59_02175 PF00953 Glycosyl transferase family 4 LA59_02180 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LA59_02180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LA59_02180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LA59_02185 PF01370 NAD dependent epimerase/dehydratase family LA59_02190 PF00483 Nucleotidyl transferase LA59_02195 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LA59_02195 PF00753 Metallo-beta-lactamase superfamily LA59_02195 PF10996 Beta-Casp domain LA59_02200 PF00121 Triosephosphate isomerase LA59_02220 PF08220 DeoR-like helix-turn-helix domain LA59_02220 PF00455 DeoR C terminal sensor domain LA59_02225 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded LA59_02230 PF06005 Cell division protein ZapB LA59_02235 PF03737 Aldolase/RraA LA59_02240 PF01040 UbiA prenyltransferase family LA59_02245 PF07724 AAA domain (Cdc48 subfamily) LA59_02245 PF00004 ATPase family associated with various cellular activities (AAA) LA59_02250 PF00227 Proteasome subunit LA59_02260 PF00356 Bacterial regulatory proteins, lacI family LA59_02265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LA59_02265 PF00271 Helicase conserved C-terminal domain LA59_02265 PF00270 DEAD/DEAH box helicase LA59_02265 PF17764 3′ DNA-binding domain (3′BD) LA59_02265 PF18074 Primosomal protein N C-terminal domain LA59_02270 PF01197 Ribosomal protein L31 LA59_02275 PF00338 Ribosomal protein S10p/S20e LA59_02280 PF00297 Ribosomal protein L3 LA59_02285 PF00573 Ribosomal protein L4/L1 family LA59_02290 PF00276 Ribosomal protein L23 LA59_02295 PF00181 Ribosomal Proteins L2, RNA binding domain LA59_02295 PF03947 Ribosomal Proteins L2, C-terminal domain LA59_02300 PF00203 Ribosomal protein S19 LA59_02305 PF00237 Ribosomal protein L22p/L17e LA59_02310 PF00189 Ribosomal protein S3, C-terminal domain LA59_02310 PF07650 KH domain LA59_02315 PF00252 Ribosomal protein L16p/L10e LA59_02320 PF00831 Ribosomal L29 protein LA59_02325 PF00366 Ribosomal protein S17 LA59_02330 PF00238 Ribosomal protein L14p/L23e LA59_02335 PF00467 KOW motif LA59_02335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LA59_02340 PF00281 Ribosomal protein L5 LA59_02340 PF00673 ribosomal L5P family C-terminus LA59_02345 PF00253 Ribosomal protein S14p/S29e LA59_02350 PF00410 Ribosomal protein S8 LA59_02355 PF00347 Ribosomal protein L6 LA59_02360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LA59_02365 PF03719 Ribosomal protein S5, C-terminal domain LA59_02365 PF00333 Ribosomal protein S5, N-terminal domain LA59_02370 PF00327 Ribosomal protein L30p/L7e LA59_02375 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LA59_02380 PF00344 SecY translocase LA59_02385 PF00444 Ribosomal protein L36 LA59_02390 PF00416 Ribosomal protein S13/S18 LA59_02395 PF00411 Ribosomal protein S11 LA59_02400 PF01479 S4 domain LA59_02400 PF00163 Ribosomal protein S4/S9 N-terminal domain LA59_02405 PF01000 RNA polymerase Rpb3/RpoA insert domain LA59_02405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LA59_02405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LA59_02410 PF01196 Ribosomal protein L17 LA59_02420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA59_02420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_02435 PF13673 Acetyltransferase (GNAT) domain LA59_02440 PF03880 DbpA RNA binding domain LA59_02440 PF00271 Helicase conserved C-terminal domain LA59_02440 PF00270 DEAD/DEAH box helicase LA59_02450 PF02872 5'-nucleotidase, C-terminal domain LA59_02450 PF00149 Calcineurin-like phosphoesterase LA59_02455 PF14824 Sirohaem biosynthesis protein central LA59_02455 PF10414 Sirohaem synthase dimerisation region LA59_02455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_02460 PF01507 Phosphoadenosine phosphosulfate reductase family LA59_02465 PF00009 Elongation factor Tu GTP binding domain LA59_02470 PF03600 Citrate transporter LA59_02470 PF02080 TrkA-C domain LA59_02495 PF00005 ABC transporter LA59_02505 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) LA59_02515 PF01625 Peptide methionine sulfoxide reductase LA59_02520 PF01103 Surface antigen LA59_02520 PF17243 POTRA domain TamA domain 1 LA59_02520 PF07244 Surface antigen variable number repeat LA59_02525 PF04357 TamB, inner membrane protein subunit of TAM complex LA59_02530 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like LA59_02540 PF00719 Inorganic pyrophosphatase LA59_02545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LA59_02550 PF01225 Mur ligase family, catalytic domain LA59_02550 PF02875 Mur ligase family, glutamate ligase domain LA59_02550 PF08245 Mur ligase middle domain LA59_02555 PF02441 Flavoprotein LA59_02565 PF00528 Binding-protein-dependent transport system inner membrane component LA59_02570 PF00005 ABC transporter LA59_02590 PF01316 Arginine repressor, DNA binding domain LA59_02590 PF02863 Arginine repressor, C-terminal domain LA59_02595 PF00056 lactate/malate dehydrogenase, NAD binding domain LA59_02595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LA59_02605 PF13006 Insertion element 4 transposase N-terminal LA59_02605 PF01609 Transposase DDE domain LA59_02610 PF00348 Polyprenyl synthetase LA59_02615 PF00829 Ribosomal prokaryotic L21 protein LA59_02620 PF01016 Ribosomal L27 protein LA59_02625 PF01018 GTP1/OBG LA59_02625 PF01926 50S ribosome-binding GTPase LA59_02630 PF06738 Putative threonine/serine exporter LA59_02635 PF12821 Threonine/Serine exporter, ThrE LA59_02640 PF00186 Dihydrofolate reductase LA59_02645 PF00149 Calcineurin-like phosphoesterase LA59_02650 PF04379 ApaG domain LA59_02655 PF00398 Ribosomal RNA adenine dimethylase LA59_02660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LA59_02665 PF09312 SurA N-terminal domain LA59_02670 PF04453 LPS transport system D LA59_02670 PF03968 OstA-like protein LA59_02675 PF00226 DnaJ domain LA59_02675 PF05099 Tellurite resistance protein TerB LA59_02685 PF00694 Aconitase C-terminal domain LA59_02690 PF00330 Aconitase family (aconitate hydratase) LA59_02695 PF00180 Isocitrate/isopropylmalate dehydrogenase LA59_02700 PF08502 LeuA allosteric (dimerisation) domain LA59_02700 PF00682 HMGL-like LA59_02710 PF01569 PAP2 superfamily LA59_02720 PF03466 LysR substrate binding domain LA59_02720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_02725 PF00501 AMP-binding enzyme LA59_02730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_02730 PF00205 Thiamine pyrophosphate enzyme, central domain LA59_02730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_02735 PF10369 Small subunit of acetolactate synthase LA59_02740 PF00990 Diguanylate cyclase, GGDEF domain LA59_02740 PF17158 Membrane-associated sensor, integral membrane domain LA59_02750 PF02887 Pyruvate kinase, alpha/beta domain LA59_02750 PF00224 Pyruvate kinase, barrel domain LA59_02755 PF08220 DeoR-like helix-turn-helix domain LA59_02755 PF00455 DeoR C terminal sensor domain LA59_02760 PF01380 SIS domain LA59_02775 PF00072 Response regulator receiver domain LA59_02775 PF00486 Transcriptional regulatory protein, C terminal LA59_02780 PF00672 HAMP domain LA59_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_02780 PF00512 His Kinase A (phospho-acceptor) domain LA59_02785 PF13419 Haloacid dehalogenase-like hydrolase LA59_02790 PF05068 Mannitol repressor LA59_02795 PF01232 Mannitol dehydrogenase Rossmann domain LA59_02795 PF08125 Mannitol dehydrogenase C-terminal domain LA59_02800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_02800 PF02378 Phosphotransferase system, EIIC LA59_02800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_02830 PF04546 Sigma-70, non-essential region LA59_02830 PF03979 Sigma-70 factor, region 1.1 LA59_02830 PF00140 Sigma-70 factor, region 1.2 LA59_02830 PF04542 Sigma-70 region 2 LA59_02830 PF04539 Sigma-70 region 3 LA59_02830 PF04545 Sigma-70, region 4 LA59_02835 PF10410 DnaB-helicase binding domain of primase LA59_02835 PF08278 DNA primase DnaG DnaB-binding LA59_02835 PF08275 DNA primase catalytic core, N-terminal domain LA59_02835 PF01807 CHC2 zinc finger LA59_02840 PF09424 Yqey-like protein LA59_02845 PF01165 Ribosomal protein S21 LA59_02850 PF00814 Glycoprotease family LA59_02855 PF00561 alpha/beta hydrolase fold LA59_02860 PF02660 Glycerol-3-phosphate acyltransferase LA59_02865 PF02152 Dihydroneopterin aldolase LA59_02870 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA59_02875 PF02673 Bacitracin resistance protein BacA LA59_02880 PF01743 Poly A polymerase head domain LA59_02880 PF12627 Probable RNA and SrmB- binding site of polymerase A LA59_02880 PF01966 HD domain LA59_02885 PF01471 Putative peptidoglycan binding domain LA59_02885 PF13401 AAA domain LA59_02895 PF08239 Bacterial SH3 domain LA59_02900 PF01384 Phosphate transporter family LA59_02905 PF01865 Protein of unknown function DUF47 LA59_02910 PF01928 CYTH domain LA59_02915 PF07885 Ion channel LA59_02920 PF02743 Cache domain LA59_02920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_02920 PF00672 HAMP domain LA59_02925 PF03710 Glutamate-ammonia ligase adenylyltransferase LA59_02925 PF08335 GlnD PII-uridylyltransferase LA59_02930 PF01467 Cytidylyltransferase-like LA59_02930 PF00294 pfkB family carbohydrate kinase LA59_02935 PF02321 Outer membrane efflux protein LA59_02940 PF00293 NUDIX domain LA59_02945 PF06853 Protein of unknown function (DUF1249) LA59_02950 PF00149 Calcineurin-like phosphoesterase LA59_02955 PF05728 Uncharacterised protein family (UPF0227) LA59_02960 PF00986 DNA gyrase B subunit, carboxyl terminus LA59_02960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_02960 PF01751 Toprim domain LA59_02960 PF00204 DNA gyrase B LA59_02965 PF00521 DNA gyrase/topoisomerase IV, subunit A LA59_02965 PF03989 DNA gyrase C-terminal domain, beta-propeller LA59_02970 PF13180 PDZ domain LA59_02975 PF00595 PDZ domain LA59_02985 PF06295 Protein of unknown function (DUF1043) LA59_02990 PF03969 AFG1-like ATPase LA59_02995 PF00572 Ribosomal protein L13 LA59_03000 PF00380 Ribosomal protein S9/S16 LA59_03005 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LA59_03005 PF00355 Rieske [2Fe-2S] domain LA59_03010 PF00032 Cytochrome b(C-terminal)/b6/petD LA59_03010 PF00033 Cytochrome b/b6/petB LA59_03015 PF02167 Cytochrome C1 family LA59_03020 PF00043 Glutathione S-transferase, C-terminal domain LA59_03020 PF02798 Glutathione S-transferase, N-terminal domain LA59_03025 PF04386 Stringent starvation protein B LA59_03030 PF04972 BON domain LA59_03035 PF13580 SIS domain LA59_03040 PF02021 Uncharacterised protein family UPF0102 LA59_03045 PF04348 LppC putative lipoprotein LA59_03050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_03055 PF01795 MraW methylase family LA59_03060 PF04999 Cell division protein FtsL LA59_03065 PF00905 Penicillin binding protein transpeptidase domain LA59_03065 PF03717 Penicillin-binding Protein dimerisation domain LA59_03070 PF08245 Mur ligase middle domain LA59_03070 PF02875 Mur ligase family, glutamate ligase domain LA59_03070 PF01225 Mur ligase family, catalytic domain LA59_03075 PF01225 Mur ligase family, catalytic domain LA59_03075 PF08245 Mur ligase middle domain LA59_03075 PF02875 Mur ligase family, glutamate ligase domain LA59_03080 PF00953 Glycosyl transferase family 4 LA59_03080 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LA59_03085 PF02875 Mur ligase family, glutamate ligase domain LA59_03085 PF08245 Mur ligase middle domain LA59_03090 PF01098 Cell cycle protein LA59_03095 PF03033 Glycosyltransferase family 28 N-terminal domain LA59_03095 PF04101 Glycosyltransferase family 28 C-terminal domain LA59_03100 PF01225 Mur ligase family, catalytic domain LA59_03100 PF08245 Mur ligase middle domain LA59_03100 PF02875 Mur ligase family, glutamate ligase domain LA59_03105 PF08478 POTRA domain, FtsQ-type LA59_03105 PF03799 Cell division protein FtsQ LA59_03110 PF02491 SHS2 domain inserted in FTSA LA59_03115 PF00091 Tubulin/FtsZ family, GTPase domain LA59_03115 PF12327 FtsZ family, C-terminal domain LA59_03120 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LA59_03125 PF07517 SecA DEAD-like domain LA59_03125 PF07516 SecA Wing and Scaffold domain LA59_03125 PF02810 SEC-C motif LA59_03125 PF01043 SecA preprotein cross-linking domain LA59_03130 PF00293 NUDIX domain LA59_03135 PF05173 Dihydrodipicolinate reductase, C-terminus LA59_03135 PF01113 Dihydrodipicolinate reductase, N-terminus LA59_03140 PF00117 Glutamine amidotransferase class-I LA59_03140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LA59_03145 PF02142 MGS-like domain LA59_03145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LA59_03145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA59_03165 PF01925 Sulfite exporter TauE/SafE LA59_03170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_03170 PF03466 LysR substrate binding domain LA59_03175 PF03458 UPF0126 domain LA59_03180 PF01497 Periplasmic binding protein LA59_03190 PF01048 Phosphorylase superfamily LA59_03200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA59_03200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_03205 PF04898 Glutamate synthase central domain LA59_03205 PF01493 GXGXG motif LA59_03205 PF00310 Glutamine amidotransferases class-II LA59_03205 PF01645 Conserved region in glutamate synthase LA59_03210 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_03210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA59_03215 PF04898 Glutamate synthase central domain LA59_03215 PF01645 Conserved region in glutamate synthase LA59_03215 PF00310 Glutamine amidotransferases class-II LA59_03215 PF01493 GXGXG motif LA59_03220 PF16199 Radical_SAM C-terminal domain LA59_03220 PF04055 Radical SAM superfamily LA59_03225 PF00360 Phytochrome region LA59_03225 PF01590 GAF domain LA59_03225 PF00990 Diguanylate cyclase, GGDEF domain LA59_03225 PF00563 EAL domain LA59_03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_03235 PF00512 His Kinase A (phospho-acceptor) domain LA59_03235 PF18415 Histidine kinase receptor ArcB trans-membrane domain LA59_03235 PF01627 Hpt domain LA59_03235 PF00072 Response regulator receiver domain LA59_03235 PF00989 PAS fold LA59_03245 PF00072 Response regulator receiver domain LA59_03245 PF00486 Transcriptional regulatory protein, C terminal LA59_03255 PF03737 Aldolase/RraA LA59_03265 PF01842 ACT domain LA59_03265 PF00696 Amino acid kinase family LA59_03265 PF13840 ACT domain LA59_03265 PF00742 Homoserine dehydrogenase LA59_03265 PF03447 Homoserine dehydrogenase, NAD binding domain LA59_03270 PF08544 GHMP kinases C terminal LA59_03270 PF00288 GHMP kinases N terminal domain LA59_03275 PF14821 Threonine synthase N terminus LA59_03275 PF00291 Pyridoxal-phosphate dependent enzyme LA59_03280 PF03358 NADPH-dependent FMN reductase LA59_03285 PF01228 Glycine radical LA59_03290 PF01261 Xylose isomerase-like TIM barrel LA59_03295 PF03167 Uracil DNA glycosylase superfamily LA59_03310 PF01235 Sodium:alanine symporter family LA59_03315 PF03883 Peroxide stress protein YaaA LA59_03325 PF00271 Helicase conserved C-terminal domain LA59_03325 PF00270 DEAD/DEAH box helicase LA59_03330 PF05175 Methyltransferase small domain LA59_03335 PF05525 Branched-chain amino acid transport protein LA59_03340 PF00258 Flavodoxin LA59_03345 PF02899 Phage integrase, N-terminal SAM-like domain LA59_03345 PF00589 Phage integrase family LA59_03350 PF13098 Thioredoxin-like domain LA59_03350 PF10411 Disulfide bond isomerase protein N-terminus LA59_03355 PF17768 RecJ OB domain LA59_03355 PF02272 DHHA1 domain LA59_03355 PF01368 DHH family LA59_03360 PF03462 PCRF domain LA59_03360 PF00472 RF-1 domain LA59_03365 PF01336 OB-fold nucleic acid binding domain LA59_03365 PF00152 tRNA synthetases class II (D, K and N) LA59_03370 PF00072 Response regulator receiver domain LA59_03370 PF02954 Bacterial regulatory protein, Fis family LA59_03370 PF00158 Sigma-54 interaction domain LA59_03375 PF13006 Insertion element 4 transposase N-terminal LA59_03375 PF01609 Transposase DDE domain LA59_03385 PF00248 Aldo/keto reductase family LA59_03395 PF02976 DNA mismatch repair enzyme MutH LA59_03400 PF00293 NUDIX domain LA59_03405 PF05524 PEP-utilising enzyme, N-terminal LA59_03405 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_03405 PF01590 GAF domain LA59_03405 PF00391 PEP-utilising enzyme, mobile domain LA59_03410 PF01925 Sulfite exporter TauE/SafE LA59_03415 PF01790 Prolipoprotein diacylglyceryl transferase LA59_03420 PF00303 Thymidylate synthase LA59_03425 PF02690 Na+/Pi-cotransporter LA59_03430 PF03466 LysR substrate binding domain LA59_03430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_03435 PF01022 Bacterial regulatory protein, arsR family LA59_03440 PF01649 Ribosomal protein S20 LA59_03445 PF03023 Lipid II flippase MurJ LA59_03450 PF01687 Riboflavin kinase LA59_03450 PF06574 FAD synthetase LA59_03455 PF08264 Anticodon-binding domain of tRNA LA59_03455 PF00133 tRNA synthetases class I (I, L, M and V) LA59_03455 PF06827 Zinc finger found in FPG and IleRS LA59_03460 PF01252 Signal peptidase (SPase) II LA59_03465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_03470 PF02401 LytB protein LA59_03475 PF04397 LytTr DNA-binding domain LA59_03475 PF00072 Response regulator receiver domain LA59_03480 PF06580 Histidine kinase LA59_03480 PF07694 5TMR of 5TMR-LYT LA59_03485 PF02554 Carbon starvation protein CstA LA59_03500 PF13006 Insertion element 4 transposase N-terminal LA59_03500 PF01609 Transposase DDE domain LA59_03505 PF01380 SIS domain LA59_03510 PF03702 Anhydro-N-acetylmuramic acid kinase LA59_03515 PF00933 Glycosyl hydrolase family 3 N terminal domain LA59_03520 PF00793 DAHP synthetase I family LA59_03525 PF01817 Chorismate mutase type II LA59_03525 PF02153 Prephenate dehydrogenase LA59_03530 PF04225 Opacity-associated protein A LysM-like domain LA59_03530 PF01551 Peptidase family M23 LA59_03535 PF07238 PilZ domain LA59_03540 PF12848 ABC transporter LA59_03540 PF00005 ABC transporter LA59_03545 PF14718 Soluble lytic murein transglycosylase L domain LA59_03545 PF01464 Transglycosylase SLT domain LA59_03550 PF01371 Trp repressor protein LA59_03555 PF01931 Protein of unknown function DUF84 LA59_03560 PF01817 Chorismate mutase type II LA59_03560 PF00800 Prephenate dehydratase LA59_03565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA59_03570 PF01464 Transglycosylase SLT domain LA59_03575 PF13525 Outer membrane lipoprotein LA59_03580 PF01479 S4 domain LA59_03580 PF00849 RNA pseudouridylate synthase LA59_03590 PF00004 ATPase family associated with various cellular activities (AAA) LA59_03590 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_03590 PF17871 AAA lid domain LA59_03590 PF07724 AAA domain (Cdc48 subfamily) LA59_03590 PF02861 Clp amino terminal domain, pathogenicity island component LA59_03635 PF03411 Penicillin-insensitive murein endopeptidase LA59_03645 PF00037 4Fe-4S binding domain LA59_03655 PF04381 Putative exonuclease, RdgC LA59_03660 PF00072 Response regulator receiver domain LA59_03660 PF00486 Transcriptional regulatory protein, C terminal LA59_03665 PF00512 His Kinase A (phospho-acceptor) domain LA59_03665 PF00989 PAS fold LA59_03665 PF11808 Phosphate regulon sensor protein PhoR LA59_03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_03670 PF12849 PBP superfamily domain LA59_03675 PF02541 Ppx/GppA phosphatase family LA59_03680 PF13089 Polyphosphate kinase N-terminal domain LA59_03680 PF17941 Polyphosphate kinase C-terminal domain 1 LA59_03680 PF13090 Polyphosphate kinase C-terminal domain 2 LA59_03680 PF02503 Polyphosphate kinase middle domain LA59_03685 PF00528 Binding-protein-dependent transport system inner membrane component LA59_03690 PF00528 Binding-protein-dependent transport system inner membrane component LA59_03695 PF00005 ABC transporter LA59_03700 PF01895 PhoU domain LA59_03715 PF03466 LysR substrate binding domain LA59_03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_03720 PF03976 Polyphosphate kinase 2 (PPK2) LA59_03725 PF03932 CutC family LA59_03730 PF00578 AhpC/TSA family LA59_03730 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA59_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_03735 PF03466 LysR substrate binding domain LA59_03740 PF01274 Malate synthase LA59_03745 PF00463 Isocitrate lyase family LA59_03750 PF00571 CBS domain LA59_03765 PF02547 Queuosine biosynthesis protein LA59_03770 PF01702 Queuine tRNA-ribosyltransferase LA59_03775 PF02699 Preprotein translocase subunit LA59_03780 PF02355 Protein export membrane protein LA59_03780 PF13721 SecD export protein N-terminal TM region LA59_03780 PF07549 SecD/SecF GG Motif LA59_03785 PF02355 Protein export membrane protein LA59_03785 PF07549 SecD/SecF GG Motif LA59_03800 PF00459 Inositol monophosphatase family LA59_03805 PF00588 SpoU rRNA Methylase family LA59_03810 PF02082 Transcriptional regulator LA59_03815 PF00266 Aminotransferase class-V LA59_03820 PF01592 NifU-like N terminal domain LA59_03825 PF01521 Iron-sulphur cluster biosynthesis LA59_03830 PF07743 HSCB C-terminal oligomerisation domain LA59_03830 PF00226 DnaJ domain LA59_03835 PF00012 Hsp70 protein LA59_03840 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_03845 PF04384 Iron-sulphur cluster assembly LA59_03850 PF12404 Peptidase LA59_03850 PF00883 Cytosol aminopeptidase family, catalytic domain LA59_03855 PF00334 Nucleoside diphosphate kinase LA59_03860 PF04055 Radical SAM superfamily LA59_03865 PF13464 Domain of unknown function (DUF4115) LA59_03870 PF04551 GcpE protein LA59_03875 PF13393 Histidyl-tRNA synthetase LA59_03875 PF03129 Anticodon binding domain LA59_03880 PF09976 Tetratricopeptide repeat-like domain LA59_03885 PF13360 PQQ-like domain LA59_03890 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LA59_03890 PF01926 50S ribosome-binding GTPase LA59_03900 PF00990 Diguanylate cyclase, GGDEF domain LA59_03900 PF13185 GAF domain LA59_03905 PF02601 Exonuclease VII, large subunit LA59_03905 PF13742 OB-fold nucleic acid binding domain LA59_03910 PF00571 CBS domain LA59_03910 PF00478 IMP dehydrogenase / GMP reductase domain LA59_03915 PF00117 Glutamine amidotransferase class-I LA59_03915 PF02540 NAD synthase LA59_03915 PF00958 GMP synthase C terminal domain LA59_03920 PF03553 Na+/H+ antiporter family LA59_03925 PF00704 Glycosyl hydrolases family 18 LA59_03925 PF06483 Chitinase C LA59_03930 PF01184 GPR1/FUN34/yaaH family LA59_03935 PF01235 Sodium:alanine symporter family LA59_03940 PF01266 FAD dependent oxidoreductase LA59_03945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_03945 PF03466 LysR substrate binding domain LA59_03960 PF01053 Cys/Met metabolism PLP-dependent enzyme LA59_03970 PF01521 Iron-sulphur cluster biosynthesis LA59_03975 PF01458 Uncharacterized protein family (UPF0051) LA59_03980 PF00005 ABC transporter LA59_03985 PF01458 Uncharacterized protein family (UPF0051) LA59_03990 PF00266 Aminotransferase class-V LA59_03995 PF02657 Fe-S metabolism associated domain LA59_04005 PF00202 Aminotransferase class-III LA59_04025 PF12805 FUSC-like inner membrane protein yccS LA59_04030 PF03466 LysR substrate binding domain LA59_04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_04060 PF00589 Phage integrase family LA59_04060 PF13356 Arm DNA-binding domain LA59_04065 PF01668 SmpB protein LA59_04070 PF03364 Polyketide cyclase / dehydrase and lipid transport LA59_04075 PF03658 RnfH family Ubiquitin LA59_04080 PF04355 SmpA / OmlA family LA59_04085 PF02463 RecF/RecN/SMC N terminal domain LA59_04095 PF01513 ATP-NAD kinase LA59_04100 PF01025 GrpE LA59_04105 PF00375 Sodium:dicarboxylate symporter family LA59_04110 PF00012 Hsp70 protein LA59_04115 PF00684 DnaJ central domain LA59_04115 PF00226 DnaJ domain LA59_04115 PF01556 DnaJ C terminal domain LA59_04120 PF00114 Pilin (bacterial filament) LA59_04120 PF07963 Prokaryotic N-terminal methylation motif LA59_04125 PF00114 Pilin (bacterial filament) LA59_04125 PF07963 Prokaryotic N-terminal methylation motif LA59_04145 PF03806 AbgT putative transporter family LA59_04150 PF14437 MafB19-like deaminase LA59_04155 PF01464 Transglycosylase SLT domain LA59_04155 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_04160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LA59_04160 PF02769 AIR synthase related protein, C-terminal domain LA59_04160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LA59_04175 PF07715 TonB-dependent Receptor Plug Domain LA59_04175 PF00593 TonB dependent receptor LA59_04190 PF01546 Peptidase family M20/M25/M40 LA59_04190 PF07687 Peptidase dimerisation domain LA59_04195 PF00860 Permease family LA59_04200 PF00156 Phosphoribosyl transferase domain LA59_04210 PF07417 Sigma factor-binding transcriptional regulator Crl LA59_04215 PF00696 Amino acid kinase family LA59_04215 PF01472 PUA domain LA59_04220 PF00171 Aldehyde dehydrogenase family LA59_04225 PF03477 ATP cone domain LA59_04230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_04230 PF01872 RibD C-terminal domain LA59_04235 PF00677 Lumazine binding domain LA59_04240 PF00925 GTP cyclohydrolase II LA59_04240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA59_04245 PF00885 6,7-dimethyl-8-ribityllumazine synthase LA59_04250 PF01029 NusB family LA59_04255 PF00586 AIR synthase related protein, N-terminal domain LA59_04255 PF02769 AIR synthase related protein, C-terminal domain LA59_04260 PF04608 Phosphatidylglycerophosphatase A LA59_04265 PF02779 Transketolase, pyrimidine binding domain LA59_04265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LA59_04265 PF02780 Transketolase, C-terminal domain LA59_04270 PF00348 Polyprenyl synthetase LA59_04275 PF02609 Exonuclease VII small subunit LA59_04280 PF01618 MotA/TolQ/ExbB proton channel family LA59_04285 PF00691 OmpA family LA59_04285 PF00691 OmpA family LA59_04285 PF13677 Membrane MotB of proton-channel complex MotA/MotB LA59_04285 PF13677 Membrane MotB of proton-channel complex MotA/MotB LA59_04290 PF02926 THUMP domain LA59_04290 PF02568 Thiamine biosynthesis protein (ThiI) LA59_04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_04295 PF03466 LysR substrate binding domain LA59_04305 PF04241 Protein of unknown function (DUF423) LA59_04310 PF01728 FtsJ-like methyltransferase LA59_04310 PF18125 RlmM ferredoxin-like domain LA59_04315 PF01223 DNA/RNA non-specific endonuclease LA59_04320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LA59_04320 PF01367 5'-3' exonuclease, C-terminal SAM fold LA59_04325 PF03641 Possible lysine decarboxylase LA59_04325 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LA59_04325 PF11892 Domain of unknown function (DUF3412) LA59_04330 PF00990 Diguanylate cyclase, GGDEF domain LA59_04340 PF14489 QueF-like protein LA59_04340 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LA59_04345 PF07348 Syd protein (SUKH-2) LA59_04350 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) LA59_04355 PF02872 5'-nucleotidase, C-terminal domain LA59_04355 PF00149 Calcineurin-like phosphoesterase LA59_04365 PF03180 NLPA lipoprotein LA59_04370 PF00528 Binding-protein-dependent transport system inner membrane component LA59_04375 PF09383 NIL domain LA59_04375 PF00005 ABC transporter LA59_04385 PF00356 Bacterial regulatory proteins, lacI family LA59_04390 PF02378 Phosphotransferase system, EIIC LA59_04390 PF00367 phosphotransferase system, EIIB LA59_04395 PF00128 Alpha amylase, catalytic domain LA59_04395 PF16657 Maltogenic Amylase, C-terminal domain LA59_04410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LA59_04410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LA59_04415 PF00464 Serine hydroxymethyltransferase LA59_04420 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LA59_04420 PF04055 Radical SAM superfamily LA59_04425 PF03099 Biotin/lipoate A/B protein ligase family LA59_04430 PF04359 Protein of unknown function (DUF493) LA59_04435 PF07943 Penicillin-binding protein 5, C-terminal domain LA59_04435 PF00768 D-alanyl-D-alanine carboxypeptidase LA59_04440 PF03330 Lytic transglycolase LA59_04440 PF05036 Sporulation related domain LA59_04445 PF01098 Cell cycle protein LA59_04450 PF03717 Penicillin-binding Protein dimerisation domain LA59_04450 PF00905 Penicillin binding protein transpeptidase domain LA59_04455 PF02590 Predicted SPOUT methyltransferase LA59_04465 PF14840 Processivity clamp loader gamma complex DNA pol III C-term LA59_04465 PF06144 DNA polymerase III, delta subunit LA59_04470 PF04390 Lipopolysaccharide-assembly LA59_04475 PF00133 tRNA synthetases class I (I, L, M and V) LA59_04475 PF13603 Leucyl-tRNA synthetase, Domain 2 LA59_04475 PF08264 Anticodon-binding domain of tRNA LA59_04480 PF07295 Zinc-ribbon containing domain LA59_04485 PF00795 Carbon-nitrogen hydrolase LA59_04490 PF03471 Transporter associated domain LA59_04490 PF00571 CBS domain LA59_04495 PF02130 Uncharacterized protein family UPF0054 LA59_04500 PF02562 PhoH-like protein LA59_04505 PF01938 TRAM domain LA59_04505 PF00919 Uncharacterized protein family UPF0004 LA59_04505 PF04055 Radical SAM superfamily LA59_04510 PF01494 FAD binding domain LA59_04620 PF06071 Protein of unknown function (DUF933) LA59_04620 PF01926 50S ribosome-binding GTPase LA59_04625 PF01195 Peptidyl-tRNA hydrolase LA59_04630 PF14572 Phosphoribosyl synthetase-associated domain LA59_04630 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LA59_04635 PF00288 GHMP kinases N terminal domain LA59_04635 PF08544 GHMP kinases C terminal LA59_04640 PF03550 Outer membrane lipoprotein LolB LA59_04645 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LA59_04645 PF01488 Shikimate / quinate 5-dehydrogenase LA59_04645 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LA59_04650 PF00472 RF-1 domain LA59_04650 PF03462 PCRF domain LA59_04655 PF17827 PrmC N-terminal domain LA59_04655 PF13847 Methyltransferase domain LA59_04660 PF04247 Invasion gene expression up-regulator, SirB LA59_04665 PF13369 Transglutaminase-like superfamily LA59_04670 PF00793 DAHP synthetase I family LA59_04675 PF02872 5'-nucleotidase, C-terminal domain LA59_04675 PF00149 Calcineurin-like phosphoesterase LA59_04680 PF04073 Aminoacyl-tRNA editing domain LA59_04685 PF01479 S4 domain LA59_04685 PF00849 RNA pseudouridylate synthase LA59_04690 PF01713 Smr domain LA59_04720 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain LA59_04720 PF02838 Glycosyl hydrolase family 20, domain 2 LA59_04720 PF03173 Putative carbohydrate binding domain LA59_04720 PF00728 Glycosyl hydrolase family 20, catalytic domain LA59_04735 PF00403 Heavy-metal-associated domain LA59_04740 PF13609 Gram-negative porin LA59_04745 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LA59_04750 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_04755 PF00691 OmpA family LA59_04755 PF01389 OmpA-like transmembrane domain LA59_04800 PF01584 CheW-like domain LA59_04800 PF00072 Response regulator receiver domain LA59_04805 PF01739 CheR methyltransferase, SAM binding domain LA59_04805 PF03705 CheR methyltransferase, all-alpha domain LA59_04810 PF00460 Flagella basal body rod protein LA59_04815 PF00460 Flagella basal body rod protein LA59_04815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_04820 PF13861 FlgD Tudor-like domain LA59_04820 PF03963 Flagellar hook capping protein - N-terminal region LA59_04820 PF13860 FlgD Ig-like domain LA59_04825 PF07559 Flagellar basal body protein FlaE LA59_04825 PF00460 Flagella basal body rod protein LA59_04825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_04830 PF00460 Flagella basal body rod protein LA59_04830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_04835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_04835 PF00460 Flagella basal body rod protein LA59_04840 PF02107 Flagellar L-ring protein LA59_04845 PF02119 Flagellar P-ring protein LA59_04850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LA59_04850 PF10135 Rod binding protein LA59_04855 PF07196 Flagellin hook IN motif LA59_04855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_04865 PF00669 Bacterial flagellin N-terminal helical region LA59_04865 PF00700 Bacterial flagellin C-terminal helical region LA59_04865 PF07196 Flagellin hook IN motif LA59_04870 PF00700 Bacterial flagellin C-terminal helical region LA59_04870 PF07196 Flagellin hook IN motif LA59_04870 PF00669 Bacterial flagellin N-terminal helical region LA59_04875 PF00700 Bacterial flagellin C-terminal helical region LA59_04875 PF07196 Flagellin hook IN motif LA59_04875 PF00669 Bacterial flagellin N-terminal helical region LA59_04880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LA59_04885 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_04885 PF05524 PEP-utilising enzyme, N-terminal LA59_04885 PF00391 PEP-utilising enzyme, mobile domain LA59_04890 PF00381 PTS HPr component phosphorylation site LA59_04895 PF00291 Pyridoxal-phosphate dependent enzyme LA59_04905 PF04354 ZipA, C-terminal FtsZ-binding domain LA59_04910 PF12826 Helix-hairpin-helix motif LA59_04910 PF00533 BRCA1 C Terminus (BRCT) domain LA59_04910 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LA59_04910 PF01653 NAD-dependent DNA ligase adenylation domain LA59_04910 PF03120 NAD-dependent DNA ligase OB-fold domain LA59_04915 PF03573 outer membrane porin, OprD family LA59_04930 PF01145 SPFH domain / Band 7 family LA59_04930 PF16200 C-terminal region of band_7 LA59_04935 PF00085 Thioredoxin LA59_04940 PF00106 short chain dehydrogenase LA59_04945 PF08338 Domain of unknown function (DUF1731) LA59_04945 PF01370 NAD dependent epimerase/dehydratase family LA59_04950 PF07556 Protein of unknown function (DUF1538) LA59_04955 PF07556 Protein of unknown function (DUF1538) LA59_04975 PF12850 Calcineurin-like phosphoesterase superfamily domain LA59_04990 PF17323 Trans-membrane regulatory protein ToxS LA59_04995 PF00486 Transcriptional regulatory protein, C terminal LA59_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_05000 PF00183 Hsp90 protein LA59_05005 PF05191 Adenylate kinase, active site lid LA59_05010 PF00762 Ferrochelatase LA59_05015 PF00854 POT family LA59_05020 PF02357 Transcription termination factor nusG LA59_05025 PF00733 Asparagine synthase LA59_05025 PF13537 Glutamine amidotransferase domain LA59_05030 PF02254 TrkA-N domain LA59_05030 PF00999 Sodium/hydrogen exchanger family LA59_05035 PF01047 MarR family LA59_05035 PF00480 ROK family LA59_05040 PF01979 Amidohydrolase family LA59_05045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LA59_05045 PF00367 phosphotransferase system, EIIB LA59_05045 PF02378 Phosphotransferase system, EIIC LA59_05050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LA59_05050 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_05055 PF07963 Prokaryotic N-terminal methylation motif LA59_05055 PF08334 Type II secretion system (T2SS), protein G LA59_05060 PF01475 Ferric uptake regulator family LA59_05070 PF00258 Flavodoxin LA59_05080 PF00561 alpha/beta hydrolase fold LA59_05090 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_05090 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_05090 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_05090 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_05105 PF01784 NIF3 (NGG1p interacting factor 3) LA59_05110 PF00285 Citrate synthase, C-terminal domain LA59_05115 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA59_05120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LA59_05125 PF00890 FAD binding domain LA59_05125 PF02910 Fumarate reductase flavoprotein C-term LA59_05130 PF13085 2Fe-2S iron-sulfur cluster binding domain LA59_05135 PF16078 2-oxoglutarate dehydrogenase N-terminus LA59_05135 PF00676 Dehydrogenase E1 component LA59_05135 PF16870 2-oxoglutarate dehydrogenase C-terminal LA59_05135 PF02779 Transketolase, pyrimidine binding domain LA59_05140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA59_05140 PF00364 Biotin-requiring enzyme LA59_05140 PF02817 e3 binding domain LA59_05145 PF00549 CoA-ligase LA59_05145 PF08442 ATP-grasp domain LA59_05150 PF02629 CoA binding domain LA59_05150 PF00549 CoA-ligase LA59_05155 PF00950 ABC 3 transport family LA59_05160 PF00005 ABC transporter LA59_05165 PF01297 Zinc-uptake complex component A periplasmic LA59_05170 PF02311 AraC-like ligand binding domain LA59_05170 PF12833 Helix-turn-helix domain LA59_05175 PF04023 FeoA domain LA59_05180 PF07664 Ferrous iron transport protein B C terminus LA59_05180 PF02421 Ferrous iron transport protein B LA59_05180 PF07670 Nucleoside recognition LA59_05180 PF17910 FeoB cytosolic helical domain LA59_05200 PF05746 DALR anticodon binding domain LA59_05200 PF00750 tRNA synthetases class I (R) LA59_05200 PF03485 Arginyl tRNA synthetase N terminal domain LA59_05205 PF06185 YecM protein LA59_05210 PF01842 ACT domain LA59_05210 PF00551 Formyl transferase LA59_05215 PF13307 Helicase C-terminal domain LA59_05215 PF04851 Type III restriction enzyme, res subunit LA59_05220 PF00814 Glycoprotease family LA59_05230 PF03843 Outer membrane lipoprotein Slp family LA59_05235 PF12697 Alpha/beta hydrolase family LA59_05240 PF00501 AMP-binding enzyme LA59_05240 PF13193 AMP-binding enzyme C-terminal domain LA59_05245 PF00570 HRDC domain LA59_05245 PF01612 3'-5' exonuclease LA59_05250 PF03776 Septum formation topological specificity factor MinE LA59_05255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA59_05260 PF03775 Septum formation inhibitor MinC, C-terminal domain LA59_05260 PF05209 Septum formation inhibitor MinC, N-terminal domain LA59_05265 PF05166 YcgL domain LA59_05270 PF13406 Transglycosylase SLT domain LA59_05275 PF03466 LysR substrate binding domain LA59_05275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_05280 PF01773 Na+ dependent nucleoside transporter N-terminus LA59_05280 PF07662 Na+ dependent nucleoside transporter C-terminus LA59_05280 PF07670 Nucleoside recognition LA59_05285 PF00145 C-5 cytosine-specific DNA methylase LA59_05295 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LA59_05295 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LA59_05310 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_05310 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_05320 PF07977 FabA-like domain LA59_05325 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_05325 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_05350 PF00221 Aromatic amino acid lyase LA59_05355 PF00535 Glycosyl transferase family 2 LA59_05360 PF07977 FabA-like domain LA59_05365 PF13193 AMP-binding enzyme C-terminal domain LA59_05365 PF00501 AMP-binding enzyme LA59_05375 PF00550 Phosphopantetheine attachment site LA59_05380 PF00550 Phosphopantetheine attachment site LA59_05405 PF04820 Tryptophan halogenase LA59_05410 PF01209 ubiE/COQ5 methyltransferase family LA59_05415 PF13391 HNH endonuclease LA59_05435 PF00425 chorismate binding enzyme LA59_05440 PF13193 AMP-binding enzyme C-terminal domain LA59_05440 PF00501 AMP-binding enzyme LA59_05445 PF00857 Isochorismatase family LA59_05445 PF00550 Phosphopantetheine attachment site LA59_05450 PF00550 Phosphopantetheine attachment site LA59_05450 PF13193 AMP-binding enzyme C-terminal domain LA59_05450 PF00975 Thioesterase domain LA59_05450 PF00668 Condensation domain LA59_05450 PF00668 Condensation domain LA59_05450 PF13193 AMP-binding enzyme C-terminal domain LA59_05450 PF00550 Phosphopantetheine attachment site LA59_05450 PF00975 Thioesterase domain LA59_05450 PF00501 AMP-binding enzyme LA59_05450 PF00501 AMP-binding enzyme LA59_05465 PF00593 TonB dependent receptor LA59_05465 PF07715 TonB-dependent Receptor Plug Domain LA59_05470 PF00571 CBS domain LA59_05470 PF03471 Transporter associated domain LA59_05470 PF01595 Cyclin M transmembrane N-terminal domain LA59_05475 PF00271 Helicase conserved C-terminal domain LA59_05475 PF00270 DEAD/DEAH box helicase LA59_05480 PF02254 TrkA-N domain LA59_05480 PF02080 TrkA-C domain LA59_05485 PF02386 Cation transport protein LA59_05495 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LA59_05500 PF03480 Bacterial extracellular solute-binding protein, family 7 LA59_05505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LA59_05510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LA59_05520 PF00072 Response regulator receiver domain LA59_05520 PF00158 Sigma-54 interaction domain LA59_05520 PF02954 Bacterial regulatory protein, Fis family LA59_05525 PF00512 His Kinase A (phospho-acceptor) domain LA59_05525 PF02743 Cache domain LA59_05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_05530 PF05697 Bacterial trigger factor protein (TF) LA59_05530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_05530 PF05698 Bacterial trigger factor protein (TF) C-terminus LA59_05535 PF00574 Clp protease LA59_05540 PF06689 ClpX C4-type zinc finger LA59_05540 PF07724 AAA domain (Cdc48 subfamily) LA59_05540 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_05545 PF02190 ATP-dependent protease La (LON) substrate-binding domain LA59_05545 PF00004 ATPase family associated with various cellular activities (AAA) LA59_05545 PF05362 Lon protease (S16) C-terminal proteolytic domain LA59_05550 PF00216 Bacterial DNA-binding protein LA59_05555 PF13145 PPIC-type PPIASE domain LA59_05575 PF01966 HD domain LA59_05575 PF13286 Phosphohydrolase-associated domain LA59_05670 PF00155 Aminotransferase class I and II LA59_05675 PF00425 chorismate binding enzyme LA59_05680 PF16582 Middle domain of thiamine pyrophosphate LA59_05680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_05680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_05685 PF12697 Alpha/beta hydrolase family LA59_05690 PF00378 Enoyl-CoA hydratase/isomerase LA59_05695 PF13378 Enolase C-terminal domain-like LA59_05700 PF13193 AMP-binding enzyme C-terminal domain LA59_05700 PF00501 AMP-binding enzyme LA59_05705 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LA59_05705 PF00367 phosphotransferase system, EIIB LA59_05705 PF02378 Phosphotransferase system, EIIC LA59_05710 PF03466 LysR substrate binding domain LA59_05710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_05720 PF03601 Conserved hypothetical protein 698 LA59_05725 PF07690 Major Facilitator Superfamily LA59_05770 PF13533 Biotin-lipoyl like LA59_05775 PF00873 AcrB/AcrD/AcrF family LA59_05795 PF00291 Pyridoxal-phosphate dependent enzyme LA59_05800 PF01037 Lrp/AsnC ligand binding domain LA59_05800 PF13404 AsnC-type helix-turn-helix domain LA59_05815 PF09619 Type III secretion system lipoprotein chaperone (YscW) LA59_05820 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA59_05830 PF05230 MASE2 domain LA59_05830 PF00990 Diguanylate cyclase, GGDEF domain LA59_05835 PF00690 Cation transporter/ATPase, N-terminus LA59_05835 PF00689 Cation transporting ATPase, C-terminus LA59_05840 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA59_05840 PF00588 SpoU rRNA Methylase family LA59_05845 PF00037 4Fe-4S binding domain LA59_05845 PF11953 Domain of unknown function (DUF3470) LA59_05855 PF00571 CBS domain LA59_05855 PF00478 IMP dehydrogenase / GMP reductase domain LA59_05860 PF01554 MatE LA59_05865 PF00403 Heavy-metal-associated domain LA59_05870 PF01048 Phosphorylase superfamily LA59_05880 PF00672 HAMP domain LA59_05880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_05885 PF01230 HIT domain LA59_05900 PF08139 Prokaryotic membrane lipoprotein lipid attachment site LA59_05900 PF13036 Peptidoglycan-synthase activator LpoB LA59_05910 PF05728 Uncharacterised protein family (UPF0227) LA59_05915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_05930 PF00270 DEAD/DEAH box helicase LA59_05930 PF02559 CarD-like/TRCF domain LA59_05930 PF00271 Helicase conserved C-terminal domain LA59_05930 PF03461 TRCF domain LA59_05930 PF17757 UvrB interaction domain LA59_05940 PF12704 MacB-like periplasmic core domain LA59_05940 PF02687 FtsX-like permease family LA59_05945 PF00005 ABC transporter LA59_05950 PF02687 FtsX-like permease family LA59_05950 PF12704 MacB-like periplasmic core domain LA59_05960 PF03772 Competence protein LA59_05960 PF00753 Metallo-beta-lactamase superfamily LA59_05965 PF00005 ABC transporter LA59_05965 PF00664 ABC transporter transmembrane region LA59_05970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LA59_05975 PF03966 Trm112p-like protein LA59_05980 PF02348 Cytidylyltransferase LA59_05985 PF04293 SpoVR like protein LA59_05990 PF04285 Protein of unknown function (DUF444) LA59_05995 PF06798 PrkA serine protein kinase C-terminal domain LA59_05995 PF08298 PrkA AAA domain LA59_06000 PF03887 YfbU domain LA59_06010 PF04055 Radical SAM superfamily LA59_06020 PF02901 Pyruvate formate lyase-like LA59_06020 PF01228 Glycine radical LA59_06035 PF00005 ABC transporter LA59_06040 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_06045 PF00528 Binding-protein-dependent transport system inner membrane component LA59_06050 PF00528 Binding-protein-dependent transport system inner membrane component LA59_06055 PF03372 Endonuclease/Exonuclease/phosphatase family LA59_06060 PF00672 HAMP domain LA59_06060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_06065 PF10689 Protein of unknown function (DUF2496) LA59_06075 PF01925 Sulfite exporter TauE/SafE LA59_06080 PF06733 DEAD_2 LA59_06080 PF13307 Helicase C-terminal domain LA59_06090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LA59_06095 PF00849 RNA pseudouridylate synthase LA59_06100 PF03971 Monomeric isocitrate dehydrogenase LA59_06105 PF00313 'Cold-shock' DNA-binding domain LA59_06110 PF02617 ATP-dependent Clp protease adaptor protein ClpS LA59_06115 PF07724 AAA domain (Cdc48 subfamily) LA59_06115 PF02861 Clp amino terminal domain, pathogenicity island component LA59_06115 PF17871 AAA lid domain LA59_06115 PF00004 ATPase family associated with various cellular activities (AAA) LA59_06115 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_06120 PF01176 Translation initiation factor 1A / IF-1 LA59_06125 PF04377 Arginine-tRNA-protein transferase, C terminus LA59_06125 PF04376 Arginine-tRNA-protein transferase, N terminus LA59_06130 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LA59_06140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA59_06145 PF10692 Protein of unknown function (DUF2498) LA59_06150 PF01751 Toprim domain LA59_06150 PF01396 Topoisomerase DNA binding C4 zinc finger LA59_06150 PF08272 Topoisomerase I zinc-ribbon-like LA59_06150 PF01131 DNA topoisomerase LA59_06155 PF00483 Nucleotidyl transferase LA59_06160 PF00534 Glycosyl transferases group 1 LA59_06160 PF08323 Starch synthase catalytic domain LA59_06180 PF04993 TfoX N-terminal domain LA59_06180 PF04994 TfoX C-terminal domain LA59_06185 PF00356 Bacterial regulatory proteins, lacI family LA59_06190 PF02613 Nitrate reductase delta subunit LA59_06195 PF00486 Transcriptional regulatory protein, C terminal LA59_06195 PF00072 Response regulator receiver domain LA59_06200 PF02698 DUF218 domain LA59_06210 PF17192 MukF middle domain LA59_06210 PF17193 MukF C-terminal domain LA59_06210 PF03882 MukF winged-helix domain LA59_06215 PF04288 MukE-like family LA59_06220 PF04310 MukB N-terminal LA59_06220 PF16330 MukB hinge domain LA59_06225 PF08443 RimK-like ATP-grasp domain LA59_06225 PF18030 RimK PreATP-grasp domain LA59_06235 PF18030 RimK PreATP-grasp domain LA59_06235 PF08443 RimK-like ATP-grasp domain LA59_06240 PF08003 Protein of unknown function (DUF1698) LA59_06245 PF13649 Methyltransferase domain LA59_06250 PF01904 Protein of unknown function DUF72 LA59_06255 PF02938 GAD domain LA59_06255 PF01336 OB-fold nucleic acid binding domain LA59_06255 PF00152 tRNA synthetases class II (D, K and N) LA59_06260 PF02075 Crossover junction endodeoxyribonuclease RuvC LA59_06265 PF17200 Single Cache domain 2 LA59_06265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_06265 PF00672 HAMP domain LA59_06270 PF01330 RuvA N terminal domain LA59_06270 PF07499 RuvA, C-terminal domain LA59_06275 PF05496 Holliday junction DNA helicase RuvB P-loop domain LA59_06275 PF05491 RuvB C-terminal winged helix domain LA59_06275 PF17864 RuvB AAA lid domain LA59_06280 PF01654 Cytochrome bd terminal oxidase subunit I LA59_06285 PF02322 Cytochrome bd terminal oxidase subunit II LA59_06290 PF08173 Membrane bound YbgT-like protein LA59_06300 PF03061 Thioesterase superfamily LA59_06305 PF01618 MotA/TolQ/ExbB proton channel family LA59_06310 PF02472 Biopolymer transport protein ExbD/TolR LA59_06320 PF07676 WD40-like Beta Propeller Repeat LA59_06320 PF04052 TolB amino-terminal domain LA59_06325 PF00691 OmpA family LA59_06330 PF13174 Tetratricopeptide repeat LA59_06330 PF16331 TolA binding protein trimerisation LA59_06335 PF00571 CBS domain LA59_06335 PF01380 SIS domain LA59_06340 PF03928 Haem-degrading LA59_06345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_06345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA59_06350 PF00391 PEP-utilising enzyme, mobile domain LA59_06350 PF05524 PEP-utilising enzyme, N-terminal LA59_06350 PF00381 PTS HPr component phosphorylation site LA59_06350 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_06350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_06360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_06370 PF04055 Radical SAM superfamily LA59_06375 PF01370 NAD dependent epimerase/dehydratase family LA59_06380 PF00923 Transaldolase/Fructose-6-phosphate aldolase LA59_06385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_06390 PF12833 Helix-turn-helix domain LA59_06395 PF00465 Iron-containing alcohol dehydrogenase LA59_06400 PF13419 Haloacid dehalogenase-like hydrolase LA59_06405 PF01238 Phosphomannose isomerase type I LA59_06410 PF02445 Quinolinate synthetase A protein LA59_06420 PF03994 Domain of Unknown Function (DUF350) LA59_06430 PF03738 Glutathionylspermidine synthase preATP-grasp LA59_06440 PF00512 His Kinase A (phospho-acceptor) domain LA59_06440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_06440 PF00072 Response regulator receiver domain LA59_06440 PF09308 LuxQ, periplasmic LA59_06445 PF06610 L-alanine exporter LA59_06470 PF12833 Helix-turn-helix domain LA59_06500 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF LA59_06515 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI LA59_06520 PF01514 Secretory protein of YscJ/FliF family LA59_06530 PF02108 Flagellar assembly protein FliH LA59_06565 PF01312 FlhB HrpN YscU SpaS Family LA59_06570 PF01311 Bacterial export proteins, family 1 LA59_06575 PF01313 Bacterial export proteins, family 3 LA59_06580 PF00813 FliP family LA59_06585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_06600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_06600 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_06600 PF18269 T3SS EscN ATPase C-terminal domain LA59_06605 PF07201 HrpJ-like domain LA59_06610 PF09059 TyeA LA59_06630 PF00771 FHIPEP family LA59_06635 PF09621 Type III secretion system regulator (LcrR) LA59_06650 PF07720 Tetratricopeptide repeat LA59_06660 PF05844 YopD protein LA59_06665 PF13411 MerR HTH family regulatory protein LA59_06670 PF02627 Carboxymuconolactone decarboxylase family LA59_06675 PF13006 Insertion element 4 transposase N-terminal LA59_06675 PF01609 Transposase DDE domain LA59_06680 PF11471 Maltoporin periplasmic N-terminal extension LA59_06680 PF02264 LamB porin LA59_06685 PF00356 Bacterial regulatory proteins, lacI family LA59_06690 PF00367 phosphotransferase system, EIIB LA59_06690 PF02378 Phosphotransferase system, EIIC LA59_06695 PF00294 pfkB family carbohydrate kinase LA59_06700 PF08244 Glycosyl hydrolases family 32 C terminal LA59_06700 PF00251 Glycosyl hydrolases family 32 N-terminal domain LA59_06705 PF03831 PhnA domain LA59_06705 PF08274 PhnA Zinc-Ribbon LA59_06715 PF07715 TonB-dependent Receptor Plug Domain LA59_06715 PF00593 TonB dependent receptor LA59_06745 PF01554 MatE LA59_06750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_06750 PF00005 ABC transporter LA59_06755 PF00005 ABC transporter LA59_06755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_06760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_06765 PF00528 Binding-protein-dependent transport system inner membrane component LA59_06775 PF02743 Cache domain LA59_06775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_06775 PF00672 HAMP domain LA59_06795 PF00529 HlyD membrane-fusion protein of T1SS LA59_06795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_06800 PF00873 AcrB/AcrD/AcrF family LA59_06810 PF00392 Bacterial regulatory proteins, gntR family LA59_06810 PF07729 FCD domain LA59_06815 PF07687 Peptidase dimerisation domain LA59_06815 PF01546 Peptidase family M20/M25/M40 LA59_06820 PF03606 C4-dicarboxylate anaerobic carrier LA59_06830 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA59_06845 PF00474 Sodium:solute symporter family LA59_06860 PF00929 Exonuclease LA59_06860 PF02811 PHP domain LA59_06860 PF14579 Helix-hairpin-helix motif LA59_06860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_06860 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_06865 PF00571 CBS domain LA59_06870 PF00392 Bacterial regulatory proteins, gntR family LA59_06870 PF07729 FCD domain LA59_06880 PF07729 FCD domain LA59_06880 PF00392 Bacterial regulatory proteins, gntR family LA59_06890 PF07940 Heparinase II/III-like protein LA59_06890 PF05426 Alginate lyase LA59_06895 PF05426 Alginate lyase LA59_06895 PF07940 Heparinase II/III-like protein LA59_06900 PF07883 Cupin domain LA59_06905 PF00294 pfkB family carbohydrate kinase LA59_06910 PF01081 KDPG and KHG aldolase LA59_06915 PF00474 Sodium:solute symporter family LA59_06925 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LA59_06925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA59_06930 PF00141 Peroxidase LA59_06935 PF00579 tRNA synthetases class I (W and Y) LA59_06950 PF03372 Endonuclease/Exonuclease/phosphatase family LA59_06955 PF02743 Cache domain LA59_06955 PF00672 HAMP domain LA59_06955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_06960 PF01752 Collagenase LA59_06960 PF08453 Peptidase family M9 N-terminal LA59_06960 PF04151 Bacterial pre-peptidase C-terminal domain LA59_06975 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) LA59_06985 PF03466 LysR substrate binding domain LA59_06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_06995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LA59_06995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LA59_07000 PF01037 Lrp/AsnC ligand binding domain LA59_07005 PF01580 FtsK/SpoIIIE family LA59_07005 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LA59_07005 PF17854 FtsK alpha domain LA59_07005 PF09397 Ftsk gamma domain LA59_07010 PF03548 Outer membrane lipoprotein carrier protein LolA LA59_07015 PF00004 ATPase family associated with various cellular activities (AAA) LA59_07015 PF12002 MgsA AAA+ ATPase C terminal LA59_07015 PF16193 AAA C-terminal domain LA59_07020 PF02403 Seryl-tRNA synthetase N-terminal domain LA59_07020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA59_07035 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA59_07040 PF00202 Aminotransferase class-III LA59_07045 PF06968 Biotin and Thiamin Synthesis associated domain LA59_07045 PF04055 Radical SAM superfamily LA59_07050 PF00155 Aminotransferase class I and II LA59_07055 PF08241 Methyltransferase domain LA59_07065 PF01435 Peptidase family M48 LA59_07075 PF00106 short chain dehydrogenase LA59_07100 PF16036 Chalcone isomerase-like LA59_07110 PF08328 Adenylosuccinate lyase C-terminal LA59_07110 PF00206 Lyase LA59_07115 PF04356 Protein of unknown function (DUF489) LA59_07130 PF00294 pfkB family carbohydrate kinase LA59_07135 PF00816 H-NS histone family LA59_07140 PF03553 Na+/H+ antiporter family LA59_07145 PF01634 ATP phosphoribosyltransferase LA59_07145 PF08029 HisG, C-terminal domain LA59_07150 PF00815 Histidinol dehydrogenase LA59_07155 PF00155 Aminotransferase class I and II LA59_07160 PF08645 Polynucleotide kinase 3 phosphatase LA59_07160 PF00475 Imidazoleglycerol-phosphate dehydratase LA59_07165 PF00117 Glutamine amidotransferase class-I LA59_07170 PF00977 Histidine biosynthesis protein LA59_07175 PF00977 Histidine biosynthesis protein LA59_07180 PF01502 Phosphoribosyl-AMP cyclohydrolase LA59_07180 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LA59_07185 PF02810 SEC-C motif LA59_07190 PF08668 HDOD domain LA59_07190 PF00563 EAL domain LA59_07195 PF00149 Calcineurin-like phosphoesterase LA59_07200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA59_07205 PF09190 DALR domain LA59_07205 PF01406 tRNA synthetases class I (C) catalytic domain LA59_07210 PF00265 Thymidine kinase LA59_07215 PF02698 DUF218 domain LA59_07240 PF01226 Formate/nitrite transporter LA59_07245 PF03649 Uncharacterised protein family (UPF0014) LA59_07250 PF06796 Periplasmic nitrate reductase protein NapE LA59_07255 PF03264 NapC/NirT cytochrome c family, N-terminal region LA59_07260 PF18364 Molybdopterin oxidoreductase N-terminal domain LA59_07260 PF01568 Molydopterin dinucleotide binding domain LA59_07260 PF00384 Molybdopterin oxidoreductase LA59_07265 PF16874 Glycosyl hydrolase family 36 C-terminal domain LA59_07265 PF16875 Glycosyl hydrolase family 36 N-terminal domain LA59_07270 PF01297 Zinc-uptake complex component A periplasmic LA59_07275 PF00005 ABC transporter LA59_07280 PF00950 ABC 3 transport family LA59_07285 PF00950 ABC 3 transport family LA59_07290 PF02833 DHHA2 domain LA59_07290 PF01368 DHH family LA59_07300 PF00005 ABC transporter LA59_07305 PF00005 ABC transporter LA59_07305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_07310 PF00528 Binding-protein-dependent transport system inner membrane component LA59_07310 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_07315 PF00528 Binding-protein-dependent transport system inner membrane component LA59_07320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_07325 PF00158 Sigma-54 interaction domain LA59_07325 PF02954 Bacterial regulatory protein, Fis family LA59_07330 PF04012 PspA/IM30 family LA59_07335 PF06667 Phage shock protein B LA59_07350 PF13533 Biotin-lipoyl like LA59_07355 PF00873 AcrB/AcrD/AcrF family LA59_07360 PF03352 Methyladenine glycosylase LA59_07365 PF03280 Proteobacterial lipase chaperone protein LA59_07370 PF00561 alpha/beta hydrolase fold LA59_07375 PF01053 Cys/Met metabolism PLP-dependent enzyme LA59_07380 PF13091 PLD-like domain LA59_07380 PF13396 Phospholipase_D-nuclease N-terminal LA59_07385 PF00209 Sodium:neurotransmitter symporter family LA59_07390 PF12729 Four helix bundle sensory module for signal transduction LA59_07390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_07390 PF00672 HAMP domain LA59_07395 PF00849 RNA pseudouridylate synthase LA59_07405 PF00175 Oxidoreductase NAD-binding domain LA59_07405 PF00970 Oxidoreductase FAD-binding domain LA59_07405 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_07410 PF03063 Prismane/CO dehydrogenase family LA59_07415 PF01590 GAF domain LA59_07415 PF00158 Sigma-54 interaction domain LA59_07420 PF01066 CDP-alcohol phosphatidyltransferase LA59_07425 PF00005 ABC transporter LA59_07430 PF00528 Binding-protein-dependent transport system inner membrane component LA59_07435 PF13416 Bacterial extracellular solute-binding protein LA59_07440 PF09335 SNARE associated Golgi protein LA59_07450 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_07450 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LA59_07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_07460 PF00512 His Kinase A (phospho-acceptor) domain LA59_07465 PF00196 Bacterial regulatory proteins, luxR family LA59_07465 PF00072 Response regulator receiver domain LA59_07475 PF00916 Sulfate permease family LA59_07475 PF01740 STAS domain LA59_07485 PF06945 Protein of unknown function (DUF1289) LA59_07495 PF02872 5'-nucleotidase, C-terminal domain LA59_07495 PF00149 Calcineurin-like phosphoesterase LA59_07510 PF01386 Ribosomal L25p family LA59_07515 PF02709 N-terminal domain of galactosyltransferase LA59_07515 PF00535 Glycosyl transferase family 2 LA59_07525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_07525 PF00512 His Kinase A (phospho-acceptor) domain LA59_07525 PF16527 Two-component sensor protein CpxA, periplasmic domain LA59_07525 PF00672 HAMP domain LA59_07530 PF00486 Transcriptional regulatory protein, C terminal LA59_07530 PF00072 Response regulator receiver domain LA59_07540 PF04851 Type III restriction enzyme, res subunit LA59_07540 PF00271 Helicase conserved C-terminal domain LA59_07545 PF00849 RNA pseudouridylate synthase LA59_07545 PF01479 S4 domain LA59_07550 PF07690 Major Facilitator Superfamily LA59_07560 PF00474 Sodium:solute symporter family LA59_07565 PF16875 Glycosyl hydrolase family 36 N-terminal domain LA59_07565 PF16874 Glycosyl hydrolase family 36 C-terminal domain LA59_07570 PF00356 Bacterial regulatory proteins, lacI family LA59_07575 PF11066 Protein of unknown function (DUF2867) LA59_07575 PF13460 NAD(P)H-binding LA59_07580 PF01554 MatE LA59_07585 PF00005 ABC transporter LA59_07600 PF06965 Na+/H+ antiporter 1 LA59_07605 PF00440 Bacterial regulatory proteins, tetR family LA59_07605 PF16295 Tetracyclin repressor-like, C-terminal domain LA59_07610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA59_07610 PF02770 Acyl-CoA dehydrogenase, middle domain LA59_07610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA59_07610 PF09317 Domain of unknown function (DUF1974) LA59_07615 PF12241 Trans-2-enoyl-CoA reductase catalytic region LA59_07615 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LA59_07615 PF07055 Enoyl reductase FAD binding domain LA59_07620 PF02080 TrkA-C domain LA59_07620 PF06826 Predicted Permease Membrane Region LA59_07625 PF00462 Glutaredoxin LA59_07630 PF00465 Iron-containing alcohol dehydrogenase LA59_07635 PF01418 Helix-turn-helix domain, rpiR family LA59_07635 PF01380 SIS domain LA59_07640 PF00282 Pyridoxal-dependent decarboxylase conserved domain LA59_07650 PF03956 Lysine exporter LysO LA59_07660 PF04993 TfoX N-terminal domain LA59_07660 PF04994 TfoX C-terminal domain LA59_07675 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_07675 PF00512 His Kinase A (phospho-acceptor) domain LA59_07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_07685 PF00266 Aminotransferase class-V LA59_07695 PF07694 5TMR of 5TMR-LYT LA59_07695 PF00990 Diguanylate cyclase, GGDEF domain LA59_07715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_07715 PF03466 LysR substrate binding domain LA59_07720 PF02447 GntP family permease LA59_07725 PF00291 Pyridoxal-phosphate dependent enzyme LA59_07730 PF00005 ABC transporter LA59_07730 PF00664 ABC transporter transmembrane region LA59_07735 PF00005 ABC transporter LA59_07735 PF00664 ABC transporter transmembrane region LA59_07740 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_07750 PF00266 Aminotransferase class-V LA59_07760 PF00990 Diguanylate cyclase, GGDEF domain LA59_07760 PF08448 PAS fold LA59_07765 PF00939 Sodium:sulfate symporter transmembrane region LA59_07770 PF02698 DUF218 domain LA59_07775 PF00390 Malic enzyme, N-terminal domain LA59_07775 PF03949 Malic enzyme, NAD binding domain LA59_07780 PF08482 ATP-dependent helicase C-terminal LA59_07780 PF00271 Helicase conserved C-terminal domain LA59_07780 PF04408 Helicase associated domain (HA2) LA59_07780 PF00270 DEAD/DEAH box helicase LA59_07790 PF16655 PhoD-like phosphatase, N-terminal domain LA59_07790 PF09423 PhoD-like phosphatase LA59_07820 PF00939 Sodium:sulfate symporter transmembrane region LA59_07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_07825 PF00512 His Kinase A (phospho-acceptor) domain LA59_07825 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_07830 PF02954 Bacterial regulatory protein, Fis family LA59_07830 PF00158 Sigma-54 interaction domain LA59_07830 PF00072 Response regulator receiver domain LA59_07835 PF03707 Bacterial signalling protein N terminal repeat LA59_07835 PF00990 Diguanylate cyclase, GGDEF domain LA59_07835 PF00563 EAL domain LA59_07840 PF11871 Domain of unknown function (DUF3391) LA59_07840 PF01966 HD domain LA59_07845 PF01810 LysE type translocator LA59_07850 PF11230 Protein of unknown function (DUF3029) LA59_07855 PF04055 Radical SAM superfamily LA59_07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_07860 PF03466 LysR substrate binding domain LA59_07865 PF03741 Integral membrane protein TerC family LA59_07875 PF01966 HD domain LA59_07880 PF00106 short chain dehydrogenase LA59_07885 PF00990 Diguanylate cyclase, GGDEF domain LA59_07885 PF17158 Membrane-associated sensor, integral membrane domain LA59_07895 PF00465 Iron-containing alcohol dehydrogenase LA59_07900 PF03222 Tryptophan/tyrosine permease family LA59_07915 PF00005 ABC transporter LA59_07920 PF01497 Periplasmic binding protein LA59_07925 PF01032 FecCD transport family LA59_07930 PF07715 TonB-dependent Receptor Plug Domain LA59_07930 PF00593 TonB dependent receptor LA59_07945 PF00664 ABC transporter transmembrane region LA59_07945 PF00005 ABC transporter LA59_07950 PF00005 ABC transporter LA59_07950 PF00664 ABC transporter transmembrane region LA59_07955 PF07963 Prokaryotic N-terminal methylation motif LA59_07955 PF00114 Pilin (bacterial filament) LA59_07965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_07965 PF03466 LysR substrate binding domain LA59_07975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA59_07975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_07990 PF00012 Hsp70 protein LA59_07995 PF00012 Hsp70 protein LA59_08005 PF00990 Diguanylate cyclase, GGDEF domain LA59_08035 PF01568 Molydopterin dinucleotide binding domain LA59_08035 PF00384 Molybdopterin oxidoreductase LA59_08035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_08040 PF12800 4Fe-4S binding domain LA59_08040 PF13247 4Fe-4S dicluster domain LA59_08045 PF04976 DMSO reductase anchor subunit (DmsC) LA59_08050 PF02613 Nitrate reductase delta subunit LA59_08060 PF02525 Flavodoxin-like fold LA59_08065 PF00270 DEAD/DEAH box helicase LA59_08065 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LA59_08065 PF00271 Helicase conserved C-terminal domain LA59_08065 PF04408 Helicase associated domain (HA2) LA59_08065 PF11898 Domain of unknown function (DUF3418) LA59_08095 PF04204 Homoserine O-succinyltransferase LA59_08110 PF00893 Small Multidrug Resistance protein LA59_08115 PF13520 Amino acid permease LA59_08125 PF01810 LysE type translocator LA59_08130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_08130 PF03466 LysR substrate binding domain LA59_08135 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_08150 PF01047 MarR family LA59_08165 PF00239 Resolvase, N terminal domain LA59_08165 PF13408 Recombinase zinc beta ribbon domain LA59_08165 PF07508 Recombinase LA59_08195 PF00239 Resolvase, N terminal domain LA59_08195 PF02796 Helix-turn-helix domain of resolvase LA59_08260 PF13651 Adenine-specific methyltransferase EcoRI LA59_08270 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LA59_08275 PF00072 Response regulator receiver domain LA59_08275 PF00196 Bacterial regulatory proteins, luxR family LA59_08310 PF01810 LysE type translocator LA59_08320 PF00529 HlyD membrane-fusion protein of T1SS LA59_08320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_08325 PF00873 AcrB/AcrD/AcrF family LA59_08330 PF16868 NMT1-like family LA59_08335 PF01925 Sulfite exporter TauE/SafE LA59_08340 PF01970 Tripartite tricarboxylate transporter TctA family LA59_08360 PF00583 Acetyltransferase (GNAT) family LA59_08375 PF00069 Protein kinase domain LA59_08375 PF03793 PASTA domain LA59_08410 PF07724 AAA domain (Cdc48 subfamily) LA59_08410 PF17871 AAA lid domain LA59_08410 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_08410 PF00004 ATPase family associated with various cellular activities (AAA) LA59_08465 PF16671 Actin cross-linking domain LA59_08465 PF04717 Type VI secretion system, phage-baseplate injector LA59_08485 PF00285 Citrate synthase, C-terminal domain LA59_08490 PF00330 Aconitase family (aconitate hydratase) LA59_08490 PF00694 Aconitase C-terminal domain LA59_08495 PF04303 PrpF protein LA59_08500 PF13193 AMP-binding enzyme C-terminal domain LA59_08500 PF00501 AMP-binding enzyme LA59_08500 PF16177 Acetyl-coenzyme A synthetase N-terminus LA59_08510 PF00089 Trypsin LA59_08525 PF04055 Radical SAM superfamily LA59_08530 PF06508 Queuosine biosynthesis protein QueC LA59_08535 PF13185 GAF domain LA59_08535 PF00990 Diguanylate cyclase, GGDEF domain LA59_08545 PF00691 OmpA family LA59_08545 PF05736 OprF membrane domain LA59_08570 PF13402 Peptidase M60, enhancin and enhancin-like LA59_08570 PF17291 N-terminal domain of M60-like peptidases LA59_08570 PF13322 Domain of unknown function (DUF4092) LA59_08580 PF02397 Bacterial sugar transferase LA59_08585 PF00535 Glycosyl transferase family 2 LA59_08590 PF13439 Glycosyltransferase Family 4 LA59_08590 PF00534 Glycosyl transferases group 1 LA59_08620 PF13439 Glycosyltransferase Family 4 LA59_08620 PF00534 Glycosyl transferases group 1 LA59_08625 PF13439 Glycosyltransferase Family 4 LA59_08625 PF00534 Glycosyl transferases group 1 LA59_08630 PF00158 Sigma-54 interaction domain LA59_08630 PF02954 Bacterial regulatory protein, Fis family LA59_08630 PF00072 Response regulator receiver domain LA59_08645 PF10531 SLBB domain LA59_08645 PF02563 Polysaccharide biosynthesis/export protein LA59_08655 PF01740 STAS domain LA59_08660 PF14743 DNA ligase OB-like domain LA59_08660 PF01068 ATP dependent DNA ligase domain LA59_08670 PF01554 MatE LA59_08675 PF00677 Lumazine binding domain LA59_08690 PF00072 Response regulator receiver domain LA59_08690 PF01339 CheB methylesterase LA59_08695 PF00990 Diguanylate cyclase, GGDEF domain LA59_08695 PF05230 MASE2 domain LA59_08705 PF00877 NlpC/P60 family LA59_08710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_08710 PF02743 Cache domain LA59_08710 PF00672 HAMP domain LA59_08755 PF00480 ROK family LA59_08765 PF00994 Probable molybdopterin binding domain LA59_08765 PF03453 MoeA N-terminal region (domain I and II) LA59_08765 PF03454 MoeA C-terminal region (domain IV) LA59_08770 PF12804 MobA-like NTP transferase domain LA59_08775 PF00005 ABC transporter LA59_08775 PF08402 TOBE domain LA59_08780 PF00528 Binding-protein-dependent transport system inner membrane component LA59_08785 PF12849 PBP superfamily domain LA59_08790 PF00158 Sigma-54 interaction domain LA59_08790 PF02954 Bacterial regulatory protein, Fis family LA59_08790 PF00072 Response regulator receiver domain LA59_08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_08795 PF00512 His Kinase A (phospho-acceptor) domain LA59_08810 PF00005 ABC transporter LA59_08810 PF12848 ABC transporter LA59_08820 PF02634 FdhD/NarQ family LA59_08840 PF02613 Nitrate reductase delta subunit LA59_08850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_08850 PF00384 Molybdopterin oxidoreductase LA59_08850 PF01568 Molydopterin dinucleotide binding domain LA59_08855 PF13247 4Fe-4S dicluster domain LA59_08875 PF02146 Sir2 family LA59_08880 PF13416 Bacterial extracellular solute-binding protein LA59_08885 PF13416 Bacterial extracellular solute-binding protein LA59_08890 PF00528 Binding-protein-dependent transport system inner membrane component LA59_08895 PF00528 Binding-protein-dependent transport system inner membrane component LA59_08900 PF08402 TOBE domain LA59_08900 PF00005 ABC transporter LA59_08910 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LA59_08920 PF01171 PP-loop family LA59_08925 PF00582 Universal stress protein family LA59_08930 PF00027 Cyclic nucleotide-binding domain LA59_08930 PF13545 Crp-like helix-turn-helix domain LA59_08945 PF00403 Heavy-metal-associated domain LA59_08955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_08955 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LA59_08970 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA59_08985 PF09308 LuxQ, periplasmic LA59_08985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_08985 PF00072 Response regulator receiver domain LA59_08985 PF00512 His Kinase A (phospho-acceptor) domain LA59_09010 PF06303 MatP N-terminal domain LA59_09010 PF17414 MatP C-terminal ribbon-helix-helix domain LA59_09015 PF05362 Lon protease (S16) C-terminal proteolytic domain LA59_09015 PF13654 AAA domain LA59_09020 PF07977 FabA-like domain LA59_09025 PF04957 Ribosome modulation factor LA59_09045 PF01170 Putative RNA methylase family UPF0020 LA59_09045 PF02926 THUMP domain LA59_09045 PF10672 S-adenosylmethionine-dependent methyltransferase LA59_09050 PF07126 Cell-division protein ZapC LA59_09055 PF01180 Dihydroorotate dehydrogenase LA59_09060 PF05088 Bacterial NAD-glutamate dehydrogenase LA59_09065 PF01433 Peptidase family M1 domain LA59_09065 PF11940 Domain of unknown function (DUF3458) Ig-like fold LA59_09065 PF17432 Domain of unknown function (DUF3458_C) ARM repeats LA59_09075 PF03572 Peptidase family S41 LA59_09075 PF11818 C-terminal domain of tail specific protease (DUF3340) LA59_09075 PF17804 Tail specific protease N-terminal domain LA59_09075 PF00595 PDZ domain LA59_09080 PF17516 ProQ C-terminal domain LA59_09080 PF04352 ProQ/FINO family LA59_09085 PF13185 GAF domain LA59_09090 PF00005 ABC transporter LA59_09090 PF00664 ABC transporter transmembrane region LA59_09095 PF04403 Paraquat-inducible protein A LA59_09100 PF02470 MlaD protein LA59_09105 PF01189 16S rRNA methyltransferase RsmB/F LA59_09105 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LA59_09105 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LA59_09125 PF00793 DAHP synthetase I family LA59_09130 PF04461 Protein of unknown function (DUF520) LA59_09135 PF14824 Sirohaem biosynthesis protein central LA59_09135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_09135 PF10414 Sirohaem synthase dimerisation region LA59_09140 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_09145 PF00528 Binding-protein-dependent transport system inner membrane component LA59_09150 PF00528 Binding-protein-dependent transport system inner membrane component LA59_09155 PF00005 ABC transporter LA59_09160 PF01027 Inhibitor of apoptosis-promoting Bax1 LA59_09165 PF04358 DsrC like protein LA59_09170 PF00708 Acylphosphatase LA59_09175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_09175 PF00672 HAMP domain LA59_09175 PF02743 Cache domain LA59_09180 PF17785 PUA-like domain LA59_09180 PF10672 S-adenosylmethionine-dependent methyltransferase LA59_09195 PF05736 OprF membrane domain LA59_09195 PF00691 OmpA family LA59_09200 PF13188 PAS domain LA59_09200 PF00563 EAL domain LA59_09200 PF00990 Diguanylate cyclase, GGDEF domain LA59_09200 PF03707 Bacterial signalling protein N terminal repeat LA59_09205 PF00672 HAMP domain LA59_09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_09205 PF00512 His Kinase A (phospho-acceptor) domain LA59_09205 PF01627 Hpt domain LA59_09205 PF00072 Response regulator receiver domain LA59_09205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LA59_09220 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_09220 PF12464 Maltose acetyltransferase LA59_09230 PF01928 CYTH domain LA59_09240 PF01047 MarR family LA59_09250 PF03729 Short repeat of unknown function (DUF308) LA59_09255 PF00924 Mechanosensitive ion channel LA59_09270 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LA59_09280 PF00691 OmpA family LA59_09280 PF05736 OprF membrane domain LA59_09315 PF00437 Type II/IV secretion system protein LA59_09330 PF04972 BON domain LA59_09330 PF00263 Bacterial type II and III secretion system protein LA59_09330 PF13629 Pilus formation protein N terminal region LA59_09350 PF01906 Putative heavy-metal-binding LA59_09355 PF05656 Protein of unknown function (DUF805) LA59_09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_09360 PF03466 LysR substrate binding domain LA59_09365 PF12833 Helix-turn-helix domain LA59_09375 PF04151 Bacterial pre-peptidase C-terminal domain LA59_09375 PF08453 Peptidase family M9 N-terminal LA59_09375 PF01752 Collagenase LA59_09385 PF00582 Universal stress protein family LA59_09390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA59_09390 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LA59_09395 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LA59_09400 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LA59_09400 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LA59_09405 PF12833 Helix-turn-helix domain LA59_09410 PF07715 TonB-dependent Receptor Plug Domain LA59_09410 PF00593 TonB dependent receptor LA59_09415 PF00072 Response regulator receiver domain LA59_09415 PF12431 Transcriptional regulator LA59_09420 PF00989 PAS fold LA59_09420 PF17203 Single cache domain 3 LA59_09420 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LA59_09420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_09435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_09460 PF02355 Protein export membrane protein LA59_09460 PF13721 SecD export protein N-terminal TM region LA59_09460 PF07549 SecD/SecF GG Motif LA59_09465 PF07549 SecD/SecF GG Motif LA59_09465 PF02355 Protein export membrane protein LA59_09470 PF01699 Sodium/calcium exchanger protein LA59_09480 PF00571 CBS domain LA59_09480 PF03448 MgtE intracellular N domain LA59_09480 PF01769 Divalent cation transporter LA59_09485 PF01914 MarC family integral membrane protein LA59_09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_09500 PF03466 LysR substrate binding domain LA59_09505 PF00924 Mechanosensitive ion channel LA59_09520 PF01794 Ferric reductase like transmembrane component LA59_09525 PF00174 Oxidoreductase molybdopterin binding domain LA59_09555 PF07729 FCD domain LA59_09555 PF00392 Bacterial regulatory proteins, gntR family LA59_09560 PF01810 LysE type translocator LA59_09570 PF05368 NmrA-like family LA59_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_09575 PF03466 LysR substrate binding domain LA59_09580 PF04151 Bacterial pre-peptidase C-terminal domain LA59_09580 PF00082 Subtilase family LA59_09580 PF05922 Peptidase inhibitor I9 LA59_09585 PF03150 Di-haem cytochrome c peroxidase LA59_09585 PF00034 Cytochrome c LA59_09595 PF00696 Amino acid kinase family LA59_09595 PF13840 ACT domain LA59_09600 PF06339 Ectoine synthase LA59_09605 PF00202 Aminotransferase class-III LA59_09610 PF00583 Acetyltransferase (GNAT) family LA59_09615 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_09625 PF00571 CBS domain LA59_09630 PF01554 MatE LA59_09645 PF00884 Sulfatase LA59_09660 PF12833 Helix-turn-helix domain LA59_09660 PF02311 AraC-like ligand binding domain LA59_09680 PF01235 Sodium:alanine symporter family LA59_09685 PF00171 Aldehyde dehydrogenase family LA59_09690 PF01590 GAF domain LA59_09690 PF00158 Sigma-54 interaction domain LA59_09690 PF02954 Bacterial regulatory protein, Fis family LA59_09720 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase LA59_09725 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase LA59_09730 PF04223 Citrate lyase, alpha subunit (CitF) LA59_09735 PF03328 HpcH/HpaI aldolase/citrate lyase family LA59_09740 PF06857 Malonate decarboxylase delta subunit (MdcD) LA59_09745 PF08218 Citrate lyase ligase C-terminal domain LA59_09750 PF03390 2-hydroxycarboxylate transporter family LA59_09755 PF04277 Oxaloacetate decarboxylase, gamma chain LA59_09760 PF00682 HMGL-like LA59_09760 PF00364 Biotin-requiring enzyme LA59_09760 PF02436 Conserved carboxylase domain LA59_09765 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LA59_09770 PF17203 Single cache domain 3 LA59_09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_09775 PF00072 Response regulator receiver domain LA59_09775 PF12431 Transcriptional regulator LA59_09800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_09815 PF00293 NUDIX domain LA59_09865 PF02798 Glutathione S-transferase, N-terminal domain LA59_09865 PF14497 Glutathione S-transferase, C-terminal domain LA59_09875 PF04209 homogentisate 1,2-dioxygenase LA59_09880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_09890 PF07687 Peptidase dimerisation domain LA59_09890 PF01546 Peptidase family M20/M25/M40 LA59_09895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_09900 PF00528 Binding-protein-dependent transport system inner membrane component LA59_09905 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_09905 PF00528 Binding-protein-dependent transport system inner membrane component LA59_09910 PF00005 ABC transporter LA59_09910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_09915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_09915 PF00005 ABC transporter LA59_09930 PF12561 ToxR activated gene A lipoprotein domain LA59_09930 PF00041 Fibronectin type III domain LA59_09935 PF08453 Peptidase family M9 N-terminal LA59_09935 PF01752 Collagenase LA59_09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_09945 PF00512 His Kinase A (phospho-acceptor) domain LA59_09950 PF00486 Transcriptional regulatory protein, C terminal LA59_09950 PF00072 Response regulator receiver domain LA59_09960 PF00873 AcrB/AcrD/AcrF family LA59_09965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_09965 PF00529 HlyD membrane-fusion protein of T1SS LA59_09985 PF01048 Phosphorylase superfamily LA59_09990 PF00528 Binding-protein-dependent transport system inner membrane component LA59_09995 PF00528 Binding-protein-dependent transport system inner membrane component LA59_10020 PF17151 Periplasmic sensor domain LA59_10020 PF00990 Diguanylate cyclase, GGDEF domain LA59_10025 PF05971 RNA methyltransferase LA59_10030 PF01863 Protein of unknown function DUF45 LA59_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_10055 PF03466 LysR substrate binding domain LA59_10060 PF07690 Major Facilitator Superfamily LA59_10095 PF00005 ABC transporter LA59_10100 PF01032 FecCD transport family LA59_10105 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LA59_10115 PF00300 Histidine phosphatase superfamily (branch 1) LA59_10120 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LA59_10125 PF02654 Cobalamin-5-phosphate synthase LA59_10130 PF02277 Phosphoribosyltransferase LA59_10135 PF01613 Flavin reductase like domain LA59_10140 PF13460 NAD(P)H-binding LA59_10155 PF00929 Exonuclease LA59_10155 PF08411 Exonuclease C-terminal LA59_10160 PF03788 LrgA family LA59_10165 PF04172 LrgB-like family LA59_10170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_10170 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_10175 PF02222 ATP-grasp domain LA59_10180 PF05724 Thiopurine S-methyltransferase (TPMT) LA59_10190 PF00216 Bacterial DNA-binding protein LA59_10230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LA59_10230 PF03147 Ferredoxin-fold anticodon binding domain LA59_10230 PF03484 tRNA synthetase B5 domain LA59_10230 PF03483 B3/4 domain LA59_10230 PF01588 Putative tRNA binding domain LA59_10235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LA59_10235 PF01409 tRNA synthetases class II core domain (F) LA59_10275 PF01906 Putative heavy-metal-binding LA59_10280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_10285 PF01042 Endoribonuclease L-PSP LA59_10290 PF00453 Ribosomal protein L20 LA59_10295 PF01632 Ribosomal protein L35 LA59_10300 PF05198 Translation initiation factor IF-3, N-terminal domain LA59_10300 PF00707 Translation initiation factor IF-3, C-terminal domain LA59_10305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA59_10305 PF02824 TGS domain LA59_10305 PF03129 Anticodon binding domain LA59_10305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA59_10320 PF07702 UTRA domain LA59_10320 PF00392 Bacterial regulatory proteins, gntR family LA59_10325 PF01979 Amidohydrolase family LA59_10330 PF00491 Arginase family LA59_10335 PF17391 Urocanase N-terminal domain LA59_10335 PF17392 Urocanase C-terminal domain LA59_10335 PF01175 Urocanase Rossmann-like domain LA59_10340 PF00221 Aromatic amino acid lyase LA59_10355 PF02913 FAD linked oxidases, C-terminal domain LA59_10355 PF13183 4Fe-4S dicluster domain LA59_10355 PF01565 FAD binding domain LA59_10370 PF00691 OmpA family LA59_10370 PF05736 OprF membrane domain LA59_10390 PF01259 SAICAR synthetase LA59_10425 PF00958 GMP synthase C terminal domain LA59_10425 PF00117 Glutamine amidotransferase class-I LA59_10425 PF03352 Methyladenine glycosylase LA59_10425 PF13302 Acetyltransferase (GNAT) domain LA59_10425 PF13673 Acetyltransferase (GNAT) domain LA59_10620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_10620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_10660 PF07883 Cupin domain LA59_10690 PF08378 Nuclease-related domain LA59_10935 PF04229 GrpB protein LA59_11005 PF13495 Phage integrase, N-terminal SAM-like domain LA59_11005 PF00589 Phage integrase family LA59_11020 PF13302 Acetyltransferase (GNAT) domain LA59_11025 PF00158 Sigma-54 interaction domain LA59_11025 PF18024 Helix-turn-helix domain LA59_11030 PF05128 Domain of unknown function (DUF697) LA59_11035 PF04317 YcjX-like family, DUF463 LA59_11050 PF00425 chorismate binding enzyme LA59_11050 PF04715 Anthranilate synthase component I, N terminal region LA59_11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_11055 PF00512 His Kinase A (phospho-acceptor) domain LA59_11055 PF09308 LuxQ, periplasmic LA59_11055 PF00072 Response regulator receiver domain LA59_11065 PF00293 NUDIX domain LA59_11070 PF03222 Tryptophan/tyrosine permease family LA59_11075 PF03315 Serine dehydratase beta chain LA59_11075 PF03313 Serine dehydratase alpha chain LA59_11080 PF13188 PAS domain LA59_11080 PF00563 EAL domain LA59_11080 PF00990 Diguanylate cyclase, GGDEF domain LA59_11080 PF03707 Bacterial signalling protein N terminal repeat LA59_11090 PF00196 Bacterial regulatory proteins, luxR family LA59_11090 PF00072 Response regulator receiver domain LA59_11095 PF01242 6-pyruvoyl tetrahydropterin synthase LA59_11100 PF17200 Single Cache domain 2 LA59_11100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_11100 PF00672 HAMP domain LA59_11105 PF01336 OB-fold nucleic acid binding domain LA59_11105 PF00152 tRNA synthetases class II (D, K and N) LA59_11120 PF00155 Aminotransferase class I and II LA59_11120 PF00392 Bacterial regulatory proteins, gntR family LA59_11135 PF00672 HAMP domain LA59_11135 PF01966 HD domain LA59_11140 PF00155 Aminotransferase class I and II LA59_11160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_11160 PF00672 HAMP domain LA59_11165 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_11170 PF01047 MarR family LA59_11175 PF00072 Response regulator receiver domain LA59_11175 PF00196 Bacterial regulatory proteins, luxR family LA59_11180 PF17200 Single Cache domain 2 LA59_11180 PF07730 Histidine kinase LA59_11185 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LA59_11195 PF03480 Bacterial extracellular solute-binding protein, family 7 LA59_11210 PF00753 Metallo-beta-lactamase superfamily LA59_11215 PF05951 Bacterial protein of unknown function (DUF882) LA59_11220 PF03734 L,D-transpeptidase catalytic domain LA59_11220 PF01471 Putative peptidoglycan binding domain LA59_11245 PF00925 GTP cyclohydrolase II LA59_11255 PF03918 Cytochrome C biogenesis protein LA59_11260 PF08534 Redoxin LA59_11265 PF01578 Cytochrome C assembly protein LA59_11265 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LA59_11270 PF03916 Polysulphide reductase, NrfD LA59_11275 PF13247 4Fe-4S dicluster domain LA59_11285 PF02335 Cytochrome c552 LA59_11300 PF00521 DNA gyrase/topoisomerase IV, subunit A LA59_11300 PF03989 DNA gyrase C-terminal domain, beta-propeller LA59_11315 PF03477 ATP cone domain LA59_11315 PF02867 Ribonucleotide reductase, barrel domain LA59_11315 PF00317 Ribonucleotide reductase, all-alpha domain LA59_11320 PF00268 Ribonucleotide reductase, small chain LA59_11330 PF00994 Probable molybdopterin binding domain LA59_11345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA59_11350 PF16653 Saccharopine dehydrogenase C-terminal domain LA59_11350 PF03435 Saccharopine dehydrogenase NADP binding domain LA59_11355 PF00202 Aminotransferase class-III LA59_11385 PF01066 CDP-alcohol phosphatidyltransferase LA59_11390 PF08459 UvrC Helix-hairpin-helix N-terminal LA59_11390 PF01541 GIY-YIG catalytic domain LA59_11390 PF02151 UvrB/uvrC motif LA59_11395 PF00072 Response regulator receiver domain LA59_11395 PF00196 Bacterial regulatory proteins, luxR family LA59_11400 PF03104 DNA polymerase family B, exonuclease domain LA59_11400 PF00136 DNA polymerase family B LA59_11410 PF09285 Elongation factor P, C-terminal LA59_11410 PF08207 Elongation factor P (EF-P) KOW-like domain LA59_11410 PF01132 Elongation factor P (EF-P) OB domain LA59_11415 PF04269 Protein of unknown function, DUF440 LA59_11420 PF00849 RNA pseudouridylate synthase LA59_11420 PF01479 S4 domain LA59_11430 PF01300 Telomere recombination LA59_11435 PF02811 PHP domain LA59_11440 PF08056 Tryptophan operon leader peptide LA59_11445 PF00425 chorismate binding enzyme LA59_11445 PF04715 Anthranilate synthase component I, N terminal region LA59_11450 PF00117 Glutamine amidotransferase class-I LA59_11455 PF00591 Glycosyl transferase family, a/b domain LA59_11455 PF02885 Glycosyl transferase family, helical bundle domain LA59_11460 PF00218 Indole-3-glycerol phosphate synthase LA59_11460 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LA59_11465 PF00291 Pyridoxal-phosphate dependent enzyme LA59_11470 PF00290 Tryptophan synthase alpha chain LA59_11475 PF00375 Sodium:dicarboxylate symporter family LA59_11480 PF17327 Acyl homoserine lactone synthase LA59_11485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_11485 PF00072 Response regulator receiver domain LA59_11495 PF04279 Intracellular septation protein A LA59_11500 PF03061 Thioesterase superfamily LA59_11505 PF03795 YCII-related domain LA59_11515 PF01717 Cobalamin-independent synthase, Catalytic domain LA59_11515 PF08267 Cobalamin-independent synthase, N-terminal domain LA59_11535 PF00990 Diguanylate cyclase, GGDEF domain LA59_11535 PF00498 FHA domain LA59_11535 PF00563 EAL domain LA59_11540 PF11842 Domain of unknown function (DUF3362) LA59_11540 PF08497 Radical SAM N-terminal LA59_11540 PF04055 Radical SAM superfamily LA59_11565 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_11565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_11570 PF00375 Sodium:dicarboxylate symporter family LA59_11575 PF01042 Endoribonuclease L-PSP LA59_11580 PF08348 YheO-like PAS domain LA59_11580 PF13309 HTH domain LA59_11585 PF00672 HAMP domain LA59_11585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_11595 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LA59_11600 PF00535 Glycosyl transferase family 2 LA59_11605 PF00486 Transcriptional regulatory protein, C terminal LA59_11605 PF00072 Response regulator receiver domain LA59_11610 PF00512 His Kinase A (phospho-acceptor) domain LA59_11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_11610 PF00672 HAMP domain LA59_11630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_11630 PF03466 LysR substrate binding domain LA59_11635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_11635 PF00529 HlyD membrane-fusion protein of T1SS LA59_11645 PF01047 MarR family LA59_11660 PF08267 Cobalamin-independent synthase, N-terminal domain LA59_11660 PF01717 Cobalamin-independent synthase, Catalytic domain LA59_11690 PF02687 FtsX-like permease family LA59_11690 PF12704 MacB-like periplasmic core domain LA59_11690 PF00005 ABC transporter LA59_11695 PF12704 MacB-like periplasmic core domain LA59_11695 PF02687 FtsX-like permease family LA59_11695 PF00005 ABC transporter LA59_11700 PF12704 MacB-like periplasmic core domain LA59_11700 PF02687 FtsX-like permease family LA59_11720 PF00440 Bacterial regulatory proteins, tetR family LA59_11725 PF00583 Acetyltransferase (GNAT) family LA59_11755 PF01938 TRAM domain LA59_11755 PF05958 tRNA (Uracil-5-)-methyltransferase LA59_11765 PF00085 Thioredoxin LA59_11770 PF11412 Disulphide bond corrector protein DsbC LA59_11770 PF02683 Cytochrome C biogenesis protein transmembrane region LA59_11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_11780 PF03466 LysR substrate binding domain LA59_11785 PF04403 Paraquat-inducible protein A LA59_11790 PF02470 MlaD protein LA59_11795 PF03886 ABC-type transport auxiliary lipoprotein component LA59_11850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_11855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LA59_11860 PF18073 Rubredoxin metal binding domain LA59_11865 PF06305 Lipopolysaccharide assembly protein A domain LA59_11870 PF00216 Bacterial DNA-binding protein LA59_11875 PF00575 S1 RNA binding domain LA59_11880 PF02224 Cytidylate kinase LA59_11885 PF08496 Peptidase family S49 N-terminal LA59_11885 PF01343 Peptidase family S49 LA59_11890 PF00106 short chain dehydrogenase LA59_11905 PF02811 PHP domain LA59_11905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_11905 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_11905 PF01336 OB-fold nucleic acid binding domain LA59_11905 PF14579 Helix-hairpin-helix motif LA59_11910 PF00072 Response regulator receiver domain LA59_11910 PF01584 CheW-like domain LA59_11915 PF00480 ROK family LA59_11920 PF02887 Pyruvate kinase, alpha/beta domain LA59_11920 PF00224 Pyruvate kinase, barrel domain LA59_11925 PF01734 Patatin-like phospholipase LA59_11940 PF00209 Sodium:neurotransmitter symporter family LA59_11950 PF00367 phosphotransferase system, EIIB LA59_11950 PF02378 Phosphotransferase system, EIIC LA59_11955 PF01026 TatD related DNase LA59_11960 PF09115 DNA polymerase III, delta subunit, C terminal LA59_11965 PF02223 Thymidylate kinase LA59_11970 PF02618 YceG-like family LA59_11975 PF01063 Amino-transferase class IV LA59_11980 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_11980 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_11985 PF00550 Phosphopantetheine attachment site LA59_11995 PF00698 Acyl transferase domain LA59_12000 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA59_12000 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA59_12005 PF02504 Fatty acid synthesis protein LA59_12010 PF01783 Ribosomal L32p protein family LA59_12015 PF02620 Large ribosomal RNA subunit accumulation protein YceD LA59_12020 PF02545 Maf-like protein LA59_12025 PF00849 RNA pseudouridylate synthase LA59_12025 PF01479 S4 domain LA59_12040 PF00916 Sulfate permease family LA59_12040 PF01740 STAS domain LA59_12045 PF01451 Low molecular weight phosphotyrosine protein phosphatase LA59_12050 PF12557 Cob(I)alamin adenosyltransferase N terminal LA59_12050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LA59_12060 PF00485 Phosphoribulokinase / Uridine kinase family LA59_12065 PF10609 NUBPL iron-transfer P-loop NTPase LA59_12070 PF01588 Putative tRNA binding domain LA59_12070 PF09334 tRNA synthetases class I (M) LA59_12080 PF00392 Bacterial regulatory proteins, gntR family LA59_12080 PF07840 FadR C-terminal domain LA59_12085 PF06450 Bacterial Na+/H+ antiporter B (NhaB) LA59_12090 PF02600 Disulfide bond formation protein DsbB LA59_12095 PF07516 SecA Wing and Scaffold domain LA59_12095 PF01043 SecA preprotein cross-linking domain LA59_12095 PF07517 SecA DEAD-like domain LA59_12095 PF02810 SEC-C motif LA59_12100 PF01207 Dihydrouridine synthase (Dus) LA59_12105 PF00990 Diguanylate cyclase, GGDEF domain LA59_12110 PF00128 Alpha amylase, catalytic domain LA59_12110 PF02903 Alpha amylase, N-terminal ig-like domain LA59_12115 PF00005 ABC transporter LA59_12120 PF02653 Branched-chain amino acid transport system / permease component LA59_12135 PF04217 Protein of unknown function, DUF412 LA59_12140 PF00871 Acetokinase family LA59_12145 PF07085 DRTGG domain LA59_12145 PF01515 Phosphate acetyl/butaryl transferase LA59_12150 PF13194 Domain of unknown function (DUF4010) LA59_12155 PF13409 Glutathione S-transferase, N-terminal domain LA59_12160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_12160 PF00005 ABC transporter LA59_12165 PF00005 ABC transporter LA59_12165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_12170 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_12170 PF00528 Binding-protein-dependent transport system inner membrane component LA59_12175 PF00528 Binding-protein-dependent transport system inner membrane component LA59_12180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_12185 PF02391 MoaE protein LA59_12190 PF02597 ThiS family LA59_12195 PF01967 MoaC family LA59_12200 PF00994 Probable molybdopterin binding domain LA59_12205 PF04055 Radical SAM superfamily LA59_12205 PF06463 Molybdenum Cofactor Synthesis C LA59_12210 PF01933 Uncharacterised protein family UPF0052 LA59_12215 PF01627 Hpt domain LA59_12220 PF00072 Response regulator receiver domain LA59_12220 PF02954 Bacterial regulatory protein, Fis family LA59_12220 PF00158 Sigma-54 interaction domain LA59_12225 PF17757 UvrB interaction domain LA59_12225 PF02151 UvrB/uvrC motif LA59_12225 PF12344 Ultra-violet resistance protein B LA59_12225 PF00271 Helicase conserved C-terminal domain LA59_12225 PF04851 Type III restriction enzyme, res subunit LA59_12235 PF01228 Glycine radical LA59_12235 PF02901 Pyruvate formate lyase-like LA59_12240 PF02508 Rnf-Nqr subunit, membrane protein LA59_12245 PF04060 Putative Fe-S cluster LA59_12250 PF10531 SLBB domain LA59_12250 PF13375 RnfC Barrel sandwich hybrid domain LA59_12250 PF12838 4Fe-4S dicluster domain LA59_12250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LA59_12255 PF03116 NQR2, RnfD, RnfE family LA59_12260 PF04205 FMN-binding domain LA59_12265 PF02508 Rnf-Nqr subunit, membrane protein LA59_12270 PF00633 Helix-hairpin-helix motif LA59_12270 PF00730 HhH-GPD superfamily base excision DNA repair protein LA59_12270 PF10576 Iron-sulfur binding domain of endonuclease III LA59_12275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_12280 PF10952 Protein of unknown function (DUF2753) LA59_12285 PF18393 MotY N-terminal domain LA59_12285 PF00691 OmpA family LA59_12290 PF00929 Exonuclease LA59_12295 PF03553 Na+/H+ antiporter family LA59_12295 PF13726 Na+-H+ antiporter family LA59_12330 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LA59_12355 PF03524 Conjugal transfer protein LA59_12360 PF03743 Bacterial conjugation TrbI-like protein LA59_12370 PF00437 Type II/IV secretion system protein LA59_12375 PF02534 Type IV secretory system Conjugative DNA transfer LA59_12385 PF01751 Toprim domain LA59_12385 PF01131 DNA topoisomerase LA59_12395 PF01168 Alanine racemase, N-terminal domain LA59_12420 PF00313 'Cold-shock' DNA-binding domain LA59_12430 PF02311 AraC-like ligand binding domain LA59_12430 PF12833 Helix-turn-helix domain LA59_12440 PF01168 Alanine racemase, N-terminal domain LA59_12455 PF06965 Na+/H+ antiporter 1 LA59_12460 PF01145 SPFH domain / Band 7 family LA59_12465 PF12221 Bacterial membrane protein N terminal LA59_12465 PF01145 SPFH domain / Band 7 family LA59_12475 PF03741 Integral membrane protein TerC family LA59_12485 PF03466 LysR substrate binding domain LA59_12485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_12490 PF03476 MOSC N-terminal beta barrel domain LA59_12490 PF03473 MOSC domain LA59_12490 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_12495 PF04794 YdjC-like protein LA59_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_12500 PF03466 LysR substrate binding domain LA59_12505 PF00561 alpha/beta hydrolase fold LA59_12510 PF07690 Major Facilitator Superfamily LA59_12515 PF03466 LysR substrate binding domain LA59_12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_12520 PF01168 Alanine racemase, N-terminal domain LA59_12520 PF14031 Putative serine dehydratase domain LA59_12525 PF02423 Ornithine cyclodeaminase/mu-crystallin family LA59_12535 PF03432 Relaxase/Mobilisation nuclease domain LA59_12535 PF18821 Large polyvalent protein-associated domain 7 LA59_12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_12595 PF00512 His Kinase A (phospho-acceptor) domain LA59_12595 PF09308 LuxQ, periplasmic LA59_12595 PF00072 Response regulator receiver domain LA59_12605 PF04002 RadC-like JAB domain LA59_12660 PF02899 Phage integrase, N-terminal SAM-like domain LA59_12660 PF00589 Phage integrase family LA59_12665 PF00462 Glutaredoxin LA59_12670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA59_12670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA59_12685 PF00171 Aldehyde dehydrogenase family LA59_12685 PF00465 Iron-containing alcohol dehydrogenase LA59_12690 PF01914 MarC family integral membrane protein LA59_12695 PF00520 Ion transport protein LA59_12695 PF00027 Cyclic nucleotide-binding domain LA59_12700 PF07963 Prokaryotic N-terminal methylation motif LA59_12700 PF00114 Pilin (bacterial filament) LA59_12705 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA59_12705 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA59_12710 PF03553 Na+/H+ antiporter family LA59_12725 PF04245 37-kD nucleoid-associated bacterial protein LA59_12730 PF07208 Protein of unknown function (DUF1414) LA59_12735 PF00884 Sulfatase LA59_12735 PF11893 Domain of unknown function (DUF3413) LA59_12745 PF00850 Histone deacetylase domain LA59_12750 PF00106 short chain dehydrogenase LA59_12760 PF01131 DNA topoisomerase LA59_12760 PF01751 Toprim domain LA59_12765 PF00881 Nitroreductase family LA59_12770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_12770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA59_12775 PF01343 Peptidase family S49 LA59_12780 PF17763 Glutaminase/Asparaginase C-terminal domain LA59_12780 PF00710 Asparaginase, N-terminal LA59_12785 PF07023 Protein of unknown function (DUF1315) LA59_12795 PF01641 SelR domain LA59_12800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_12800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_12805 PF01263 Aldose 1-epimerase LA59_12810 PF01156 Inosine-uridine preferring nucleoside hydrolase LA59_12815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_12815 PF08447 PAS fold LA59_12815 PF13426 PAS domain LA59_12820 PF13847 Methyltransferase domain LA59_12835 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_12840 PF00245 Alkaline phosphatase LA59_12850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_12855 PF03992 Antibiotic biosynthesis monooxygenase LA59_12860 PF05552 Conserved TM helix LA59_12860 PF00924 Mechanosensitive ion channel LA59_12865 PF04226 Transglycosylase associated protein LA59_12870 PF03692 Putative zinc- or iron-chelating domain LA59_12875 PF03692 Putative zinc- or iron-chelating domain LA59_12880 PF13309 HTH domain LA59_12880 PF08348 YheO-like PAS domain LA59_12885 PF03313 Serine dehydratase alpha chain LA59_12890 PF01042 Endoribonuclease L-PSP LA59_12900 PF00230 Major intrinsic protein LA59_12905 PF13662 Toprim domain LA59_12905 PF02132 RecR protein LA59_12910 PF02575 YbaB/EbfC DNA-binding family LA59_12915 PF12169 DNA polymerase III subunits gamma and tau domain III LA59_12915 PF12170 DNA polymerase III tau subunit V interacting with alpha LA59_12920 PF00156 Phosphoribosyl transferase domain LA59_12925 PF04304 Protein of unknown function (DUF454) LA59_12935 PF00072 Response regulator receiver domain LA59_12940 PF03466 LysR substrate binding domain LA59_12940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_12945 PF00156 Phosphoribosyl transferase domain LA59_12950 PF02674 Colicin V production protein LA59_12955 PF05036 Sporulation related domain LA59_12960 PF08245 Mur ligase middle domain LA59_12960 PF02875 Mur ligase family, glutamate ligase domain LA59_12965 PF01039 Carboxyl transferase domain LA59_12965 PF17848 Acetyl-coA carboxylase zinc finger domain LA59_12970 PF01416 tRNA pseudouridine synthase LA59_12980 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA59_12980 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA59_12985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_12985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_12985 PF11890 Domain of unknown function (DUF3410) LA59_12990 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_12990 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_12995 PF01266 FAD dependent oxidoreductase LA59_12995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase LA59_13005 PF08891 YfcL protein LA59_13010 PF04315 Elongation factor P hydroxylase LA59_13015 PF03458 UPF0126 domain LA59_13020 PF01264 Chorismate synthase LA59_13025 PF05175 Methyltransferase small domain LA59_13030 PF01713 Smr domain LA59_13035 PF00300 Histidine phosphatase superfamily (branch 1) LA59_13040 PF05193 Peptidase M16 inactive domain LA59_13040 PF00675 Insulinase (Peptidase family M16) LA59_13040 PF16187 Middle or third domain of peptidase_M16 LA59_13045 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LA59_13045 PF00378 Enoyl-CoA hydratase/isomerase LA59_13045 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LA59_13050 PF02803 Thiolase, C-terminal domain LA59_13050 PF00108 Thiolase, N-terminal domain LA59_13055 PF04542 Sigma-70 region 2 LA59_13055 PF08281 Sigma-70, region 4 LA59_13065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA59_13070 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA59_13075 PF04333 MlaA lipoprotein LA59_13080 PF03918 Cytochrome C biogenesis protein LA59_13085 PF03918 Cytochrome C biogenesis protein LA59_13090 PF08534 Redoxin LA59_13095 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LA59_13095 PF01578 Cytochrome C assembly protein LA59_13100 PF03100 CcmE LA59_13110 PF01578 Cytochrome C assembly protein LA59_13115 PF03379 CcmB protein LA59_13120 PF00005 ABC transporter LA59_13130 PF01584 CheW-like domain LA59_13140 PF13614 AAA domain LA59_13145 PF00072 Response regulator receiver domain LA59_13145 PF01339 CheB methylesterase LA59_13150 PF01627 Hpt domain LA59_13150 PF01584 CheW-like domain LA59_13150 PF02895 Signal transducing histidine kinase, homodimeric domain LA59_13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_13150 PF07194 P2 response regulator binding domain LA59_13155 PF04344 Chemotaxis phosphatase, CheZ LA59_13160 PF00072 Response regulator receiver domain LA59_13165 PF04542 Sigma-70 region 2 LA59_13165 PF04545 Sigma-70, region 4 LA59_13165 PF04539 Sigma-70 region 3 LA59_13170 PF10609 NUBPL iron-transfer P-loop NTPase LA59_13175 PF00448 SRP54-type protein, GTPase domain LA59_13180 PF00771 FHIPEP family LA59_13185 PF01312 FlhB HrpN YscU SpaS Family LA59_13190 PF01311 Bacterial export proteins, family 1 LA59_13195 PF01313 Bacterial export proteins, family 3 LA59_13200 PF00813 FliP family LA59_13205 PF04347 Flagellar biosynthesis protein, FliO LA59_13210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_13215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_13215 PF02154 Flagellar motor switch protein FliM LA59_13240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_13240 PF18269 T3SS EscN ATPase C-terminal domain LA59_13250 PF14842 FliG N-terminal domain LA59_13250 PF14841 FliG middle domain LA59_13250 PF01706 FliG C-terminal domain LA59_13255 PF08345 Flagellar M-ring protein C-terminal LA59_13255 PF01514 Secretory protein of YscJ/FliF family LA59_13260 PF02049 Flagellar hook-basal body complex protein FliE LA59_13265 PF00158 Sigma-54 interaction domain LA59_13265 PF02954 Bacterial regulatory protein, Fis family LA59_13265 PF00072 Response regulator receiver domain LA59_13270 PF00512 His Kinase A (phospho-acceptor) domain LA59_13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_13275 PF02954 Bacterial regulatory protein, Fis family LA59_13275 PF00158 Sigma-54 interaction domain LA59_13275 PF00072 Response regulator receiver domain LA59_13280 PF02561 Flagellar protein FliS LA59_13290 PF07196 Flagellin hook IN motif LA59_13290 PF07195 Flagellar hook-associated protein 2 C-terminus LA59_13290 PF02465 Flagellar hook-associated protein 2 N-terminus LA59_13295 PF03646 FlaG protein LA59_13300 PF00669 Bacterial flagellin N-terminal helical region LA59_13300 PF07196 Flagellin hook IN motif LA59_13300 PF00700 Bacterial flagellin C-terminal helical region LA59_13305 PF00669 Bacterial flagellin N-terminal helical region LA59_13305 PF00700 Bacterial flagellin C-terminal helical region LA59_13305 PF07196 Flagellin hook IN motif LA59_13315 PF07196 Flagellin hook IN motif LA59_13315 PF00669 Bacterial flagellin N-terminal helical region LA59_13315 PF00700 Bacterial flagellin C-terminal helical region LA59_13325 PF02056 Family 4 glycosyl hydrolase LA59_13325 PF11975 Family 4 glycosyl hydrolase C-terminal domain LA59_13330 PF12833 Helix-turn-helix domain LA59_13335 PF04261 Dyp-type peroxidase family LA59_13340 PF11143 Protein of unknown function (DUF2919) LA59_13360 PF03960 ArsC family LA59_13365 PF07687 Peptidase dimerisation domain LA59_13365 PF01546 Peptidase family M20/M25/M40 LA59_13385 PF00701 Dihydrodipicolinate synthetase family LA59_13390 PF01842 ACT domain LA59_13395 PF00578 AhpC/TSA family LA59_13400 PF01594 AI-2E family transporter LA59_13410 PF13181 Tetratricopeptide repeat LA59_13410 PF01435 Peptidase family M48 LA59_13415 PF03960 ArsC family LA59_13420 PF03358 NADPH-dependent FMN reductase LA59_13435 PF00860 Permease family LA59_13445 PF02769 AIR synthase related protein, C-terminal domain LA59_13445 PF00586 AIR synthase related protein, N-terminal domain LA59_13450 PF00551 Formyl transferase LA59_13455 PF13230 Glutamine amidotransferases class-II LA59_13460 PF13580 SIS domain LA59_13465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA59_13465 PF02770 Acyl-CoA dehydrogenase, middle domain LA59_13465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA59_13465 PF09317 Domain of unknown function (DUF1974) LA59_13485 PF00929 Exonuclease LA59_13490 PF00075 RNase H LA59_13495 PF08241 Methyltransferase domain LA59_13500 PF16123 Hydroxyacylglutathione hydrolase C-terminus LA59_13505 PF01464 Transglycosylase SLT domain LA59_13505 PF01476 LysM domain LA59_13520 PF00543 Nitrogen regulatory protein P-II LA59_13525 PF00034 Cytochrome c LA59_13530 PF01171 PP-loop family LA59_13530 PF11734 TilS substrate C-terminal domain LA59_13530 PF09179 TilS substrate binding domain LA59_13535 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LA59_13540 PF01336 OB-fold nucleic acid binding domain LA59_13540 PF02811 PHP domain LA59_13540 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_13540 PF14579 Helix-hairpin-helix motif LA59_13540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_13545 PF01351 Ribonuclease HII LA59_13550 PF02684 Lipid-A-disaccharide synthetase LA59_13555 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LA59_13555 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_13560 PF07977 FabA-like domain LA59_13565 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_13565 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LA59_13570 PF03938 Outer membrane protein (OmpH-like) LA59_13575 PF01103 Surface antigen LA59_13575 PF07244 Surface antigen variable number repeat LA59_13580 PF17820 PDZ domain LA59_13580 PF02163 Peptidase family M50 LA59_13585 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LA59_13585 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LA59_13585 PF13288 DXP reductoisomerase C-terminal domain LA59_13595 PF01255 Putative undecaprenyl diphosphate synthase LA59_13600 PF01765 Ribosome recycling factor LA59_13605 PF00696 Amino acid kinase family LA59_13610 PF00889 Elongation factor TS LA59_13615 PF00318 Ribosomal protein S2 LA59_13620 PF00557 Metallopeptidase family M24 LA59_13625 PF01842 ACT domain LA59_13625 PF08335 GlnD PII-uridylyltransferase LA59_13625 PF01966 HD domain LA59_13625 PF01909 Nucleotidyltransferase domain LA59_13630 PF11944 Protein of unknown function (DUF3461) LA59_13635 PF00849 RNA pseudouridylate synthase LA59_13640 PF04287 tRNA pseudouridine synthase C LA59_13670 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LA59_13680 PF01370 NAD dependent epimerase/dehydratase family LA59_13705 PF03806 AbgT putative transporter family LA59_13710 PF01197 Ribosomal protein L31 LA59_13715 PF01980 tRNA-methyltransferase O LA59_13715 PF18389 TrmO C-terminal domain LA59_13720 PF03129 Anticodon binding domain LA59_13720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LA59_13720 PF04073 Aminoacyl-tRNA editing domain LA59_13730 PF06786 Uncharacterised protein family (UPF0253) LA59_13740 PF00209 Sodium:neurotransmitter symporter family LA59_13745 PF00041 Fibronectin type III domain LA59_13745 PF00704 Glycosyl hydrolases family 18 LA59_13755 PF01272 Transcription elongation factor, GreA/GreB, C-term LA59_13755 PF03449 Transcription elongation factor, N-terminal LA59_13760 PF16124 RecQ zinc-binding LA59_13760 PF09382 RQC domain LA59_13760 PF00570 HRDC domain LA59_13760 PF00271 Helicase conserved C-terminal domain LA59_13760 PF00270 DEAD/DEAH box helicase LA59_13765 PF11799 impB/mucB/samB family C-terminal domain LA59_13765 PF00817 impB/mucB/samB family LA59_13765 PF11798 IMS family HHH motif LA59_13770 PF00990 Diguanylate cyclase, GGDEF domain LA59_13770 PF00072 Response regulator receiver domain LA59_13780 PF02424 ApbE family LA59_13785 PF00175 Oxidoreductase NAD-binding domain LA59_13785 PF00970 Oxidoreductase FAD-binding domain LA59_13785 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_13790 PF02508 Rnf-Nqr subunit, membrane protein LA59_13795 PF02508 Rnf-Nqr subunit, membrane protein LA59_13800 PF04205 FMN-binding domain LA59_13805 PF03116 NQR2, RnfD, RnfE family LA59_13810 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) LA59_13810 PF11973 NQRA C-terminal domain LA59_13815 PF01722 BolA-like protein LA59_13820 PF05175 Methyltransferase small domain LA59_13830 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA59_13835 PF07690 Major Facilitator Superfamily LA59_13845 PF04545 Sigma-70, region 4 LA59_13845 PF04542 Sigma-70 region 2 LA59_13860 PF03502 Nucleoside-specific channel-forming protein, Tsx LA59_13865 PF02558 Ketopantoate reductase PanE/ApbA LA59_13865 PF08546 Ketopantoate reductase PanE/ApbA C terminal LA59_13870 PF01965 DJ-1/PfpI family LA59_13875 PF00266 Aminotransferase class-V LA59_13880 PF02657 Fe-S metabolism associated domain LA59_13885 PF00899 ThiF family LA59_13890 PF03562 MltA specific insert domain LA59_13890 PF06725 3D domain LA59_13900 PF00583 Acetyltransferase (GNAT) family LA59_13900 PF00696 Amino acid kinase family LA59_13910 PF13538 UvrD-like helicase C-terminal domain LA59_13915 PF13361 UvrD-like helicase C-terminal domain LA59_13915 PF00580 UvrD/REP helicase N-terminal domain LA59_13915 PF12705 PD-(D/E)XK nuclease superfamily LA59_13920 PF17946 RecC C-terminal domain LA59_13925 PF00884 Sulfatase LA59_13925 PF11893 Domain of unknown function (DUF3413) LA59_13935 PF03466 LysR substrate binding domain LA59_13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_13940 PF07130 YebG protein LA59_13955 PF14602 Hexapeptide repeat of succinyl-transferase LA59_13955 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle LA59_13960 PF03009 Glycerophosphoryl diester phosphodiesterase family LA59_13965 PF07690 Major Facilitator Superfamily LA59_13970 PF00230 Major intrinsic protein LA59_13975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LA59_13975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LA59_13980 PF08220 DeoR-like helix-turn-helix domain LA59_13980 PF00455 DeoR C terminal sensor domain LA59_13985 PF01266 FAD dependent oxidoreductase LA59_13985 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LA59_13990 PF01464 Transglycosylase SLT domain LA59_13990 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LA59_14005 PF01588 Putative tRNA binding domain LA59_14010 PF00356 Bacterial regulatory proteins, lacI family LA59_14015 PF01263 Aldose 1-epimerase LA59_14020 PF08544 GHMP kinases C terminal LA59_14020 PF00288 GHMP kinases N terminal domain LA59_14020 PF10509 Galactokinase galactose-binding signature LA59_14025 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LA59_14025 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LA59_14030 PF16363 GDP-mannose 4,6 dehydratase LA59_14035 PF03717 Penicillin-binding Protein dimerisation domain LA59_14035 PF00905 Penicillin binding protein transpeptidase domain LA59_14045 PF00356 Bacterial regulatory proteins, lacI family LA59_14050 PF02929 Beta galactosidase small chain LA59_14050 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA59_14050 PF02837 Glycosyl hydrolases family 2, sugar binding domain LA59_14050 PF16353 Domain of unknown function(DUF4981) LA59_14050 PF00703 Glycosyl hydrolases family 2 LA59_14055 PF04074 YhcH/YjgK/YiaL LA59_14060 PF13520 Amino acid permease LA59_14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_14065 PF03466 LysR substrate binding domain LA59_14110 PF00437 Type II/IV secretion system protein LA59_14125 PF13629 Pilus formation protein N terminal region LA59_14125 PF00263 Bacterial type II and III secretion system protein LA59_14125 PF04972 BON domain LA59_14150 PF02805 Metal binding domain of Ada LA59_14150 PF12833 Helix-turn-helix domain LA59_14155 PF00501 AMP-binding enzyme LA59_14165 PF03466 LysR substrate binding domain LA59_14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_14170 PF14492 Elongation Factor G, domain II LA59_14170 PF03764 Elongation factor G, domain IV LA59_14170 PF00009 Elongation factor Tu GTP binding domain LA59_14170 PF03144 Elongation factor Tu domain 2 LA59_14170 PF00679 Elongation factor G C-terminus LA59_14175 PF18073 Rubredoxin metal binding domain LA59_14185 PF18429 Domain of unknown function (DUF5609) LA59_14195 PF01048 Phosphorylase superfamily LA59_14200 PF01676 Metalloenzyme superfamily LA59_14205 PF00591 Glycosyl transferase family, a/b domain LA59_14205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LA59_14205 PF02885 Glycosyl transferase family, helical bundle domain LA59_14210 PF01791 DeoC/LacD family aldolase LA59_14215 PF01773 Na+ dependent nucleoside transporter N-terminus LA59_14215 PF07670 Nucleoside recognition LA59_14215 PF07662 Na+ dependent nucleoside transporter C-terminus LA59_14220 PF01026 TatD related DNase LA59_14225 PF16658 Class II release factor RF3, C-terminal domain LA59_14225 PF03144 Elongation factor Tu domain 2 LA59_14225 PF00009 Elongation factor Tu GTP binding domain LA59_14230 PF05230 MASE2 domain LA59_14230 PF00990 Diguanylate cyclase, GGDEF domain LA59_14250 PF13508 Acetyltransferase (GNAT) domain LA59_14260 PF00563 EAL domain LA59_14260 PF00990 Diguanylate cyclase, GGDEF domain LA59_14260 PF03707 Bacterial signalling protein N terminal repeat LA59_14275 PF01554 MatE LA59_14285 PF07719 Tetratricopeptide repeat LA59_14285 PF13181 Tetratricopeptide repeat LA59_14290 PF03725 3' exoribonuclease family, domain 2 LA59_14290 PF00575 S1 RNA binding domain LA59_14290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LA59_14290 PF01138 3' exoribonuclease family, domain 1 LA59_14290 PF00013 KH domain LA59_14295 PF00312 Ribosomal protein S15 LA59_14300 PF01509 TruB family pseudouridylate synthase (N terminal domain) LA59_14300 PF16198 tRNA pseudouridylate synthase B C-terminal domain LA59_14300 PF09157 Pseudouridine synthase II TruB, C-terminal LA59_14305 PF02033 Ribosome-binding factor A LA59_14310 PF00009 Elongation factor Tu GTP binding domain LA59_14310 PF04760 Translation initiation factor IF-2, N-terminal region LA59_14310 PF08364 Bacterial translation initiation factor IF-2 associated region LA59_14310 PF11987 Translation-initiation factor 2 LA59_14315 PF00575 S1 RNA binding domain LA59_14315 PF13184 NusA-like KH domain LA59_14315 PF08529 NusA N-terminal domain LA59_14320 PF17384 RimP C-terminal SH3 domain LA59_14320 PF02576 RimP N-terminal domain LA59_14335 PF03840 Preprotein translocase SecG subunit LA59_14340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_14340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_14340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_14340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_14345 PF00809 Pterin binding enzyme LA59_14350 PF01434 Peptidase family M41 LA59_14350 PF06480 FtsH Extracellular LA59_14350 PF00004 ATPase family associated with various cellular activities (AAA) LA59_14350 PF17862 AAA+ lid domain LA59_14355 PF01728 FtsJ-like methyltransferase LA59_14360 PF01985 CRS1 / YhbY (CRM) domain LA59_14365 PF01272 Transcription elongation factor, GreA/GreB, C-term LA59_14365 PF03449 Transcription elongation factor, N-terminal LA59_14370 PF13609 Gram-negative porin LA59_14375 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LA59_14385 PF00579 tRNA synthetases class I (W and Y) LA59_14390 PF08525 Opacity-associated protein A N-terminal motif LA59_14390 PF01551 Peptidase family M23 LA59_14390 PF01476 LysM domain LA59_14395 PF00873 AcrB/AcrD/AcrF family LA59_14400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_14405 PF01521 Iron-sulphur cluster biosynthesis LA59_14410 PF00202 Aminotransferase class-III LA59_14415 PF01594 AI-2E family transporter LA59_14420 PF05175 Methyltransferase small domain LA59_14420 PF08468 Methyltransferase small domain N-terminal LA59_14430 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_14430 PF00512 His Kinase A (phospho-acceptor) domain LA59_14430 PF00072 Response regulator receiver domain LA59_14435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_14440 PF00528 Binding-protein-dependent transport system inner membrane component LA59_14445 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_14445 PF00528 Binding-protein-dependent transport system inner membrane component LA59_14450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_14450 PF00005 ABC transporter LA59_14455 PF00005 ABC transporter LA59_14455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_14465 PF01869 BadF/BadG/BcrA/BcrD ATPase family LA59_14470 PF02838 Glycosyl hydrolase family 20, domain 2 LA59_14470 PF00728 Glycosyl hydrolase family 20, catalytic domain LA59_14475 PF06165 Glycosyltransferase family 36 LA59_14475 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LA59_14480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_14480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_14480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_14480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_14485 PF00005 ABC transporter LA59_14485 PF08402 TOBE domain LA59_14495 PF13416 Bacterial extracellular solute-binding protein LA59_14500 PF00909 Ammonium Transporter Family LA59_14505 PF00543 Nitrogen regulatory protein P-II LA59_14510 PF06062 Uncharacterised protein family (UPF0231) LA59_14515 PF06434 Aconitate hydratase 2 N-terminus LA59_14515 PF11791 Aconitate B N-terminal domain LA59_14515 PF00330 Aconitase family (aconitate hydratase) LA59_14520 PF01734 Patatin-like phospholipase LA59_14525 PF14814 Bifunctional transglycosylase second domain LA59_14525 PF00905 Penicillin binding protein transpeptidase domain LA59_14525 PF00912 Transglycosylase LA59_14530 PF04408 Helicase associated domain (HA2) LA59_14530 PF00271 Helicase conserved C-terminal domain LA59_14530 PF08482 ATP-dependent helicase C-terminal LA59_14530 PF00270 DEAD/DEAH box helicase LA59_14535 PF03749 Sugar fermentation stimulation protein RE domain LA59_14535 PF17746 SfsA N-terminal OB domain LA59_14540 PF01258 Prokaryotic dksA/traR C4-type zinc finger LA59_14545 PF00749 tRNA synthetases class I (E and Q), catalytic domain LA59_14550 PF01743 Poly A polymerase head domain LA59_14550 PF12626 Polymerase A arginine-rich C-terminus LA59_14550 PF12627 Probable RNA and SrmB- binding site of polymerase A LA59_14555 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LA59_14560 PF02548 Ketopantoate hydroxymethyltransferase LA59_14565 PF02569 Pantoate-beta-alanine ligase LA59_14570 PF03279 Bacterial lipid A biosynthesis acyltransferase LA59_14575 PF01061 ABC-2 type transporter LA59_14580 PF00005 ABC transporter LA59_14585 PF01740 STAS domain LA59_14585 PF00916 Sulfate permease family LA59_14590 PF00484 Carbonic anhydrase LA59_14595 PF00156 Phosphoribosyl transferase domain LA59_14600 PF00440 Bacterial regulatory proteins, tetR family LA59_14605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_14605 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_14610 PF02817 e3 binding domain LA59_14610 PF00364 Biotin-requiring enzyme LA59_14610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA59_14615 PF00456 Transketolase, thiamine diphosphate binding domain LA59_14615 PF17831 Pyruvate dehydrogenase E1 component middle domain LA59_14620 PF00392 Bacterial regulatory proteins, gntR family LA59_14620 PF07729 FCD domain LA59_14625 PF01510 N-acetylmuramoyl-L-alanine amidase LA59_14630 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LA59_14630 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LA59_14640 PF00114 Pilin (bacterial filament) LA59_14640 PF07963 Prokaryotic N-terminal methylation motif LA59_14645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA59_14645 PF00437 Type II/IV secretion system protein LA59_14650 PF00482 Type II secretion system (T2SS), protein F LA59_14655 PF01478 Type IV leader peptidase family LA59_14655 PF06750 Bacterial Peptidase A24 N-terminal domain LA59_14660 PF01121 Dephospho-CoA kinase LA59_14665 PF07072 Cell division protein LA59_14670 PF03884 DNA gyrase inhibitor YacG LA59_14675 PF01245 Ribosomal protein L19 LA59_14680 PF01746 tRNA (Guanine-1)-methyltransferase LA59_14685 PF01782 RimM N-terminal domain LA59_14685 PF05239 PRC-barrel domain LA59_14690 PF00886 Ribosomal protein S16 LA59_14695 PF02978 Signal peptide binding domain LA59_14695 PF02881 SRP54-type protein, helical bundle domain LA59_14695 PF00448 SRP54-type protein, GTPase domain LA59_14700 PF01578 Cytochrome C assembly protein LA59_14705 PF00571 CBS domain LA59_14705 PF03471 Transporter associated domain LA59_14705 PF01595 Cyclin M transmembrane N-terminal domain LA59_14710 PF02664 S-Ribosylhomocysteinase (LuxS) LA59_14720 PF04262 Glutamate-cysteine ligase LA59_14725 PF05193 Peptidase M16 inactive domain LA59_14725 PF00675 Insulinase (Peptidase family M16) LA59_14730 PF09335 SNARE associated Golgi protein LA59_14740 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit LA59_14745 PF00364 Biotin-requiring enzyme LA59_14745 PF00682 HMGL-like LA59_14745 PF02436 Conserved carboxylase domain LA59_14750 PF04277 Oxaloacetate decarboxylase, gamma chain LA59_14805 PF02599 Global regulator protein family LA59_14810 PF00696 Amino acid kinase family LA59_14810 PF01842 ACT domain LA59_14810 PF13840 ACT domain LA59_14815 PF02272 DHHA1 domain LA59_14815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LA59_14815 PF01411 tRNA synthetases class II (A) LA59_14820 PF02631 RecX family LA59_14825 PF00154 recA bacterial DNA recombination protein LA59_14830 PF02464 Competence-damaged protein LA59_14835 PF00488 MutS domain V LA59_14835 PF05190 MutS family domain IV LA59_14835 PF05192 MutS domain III LA59_14835 PF05188 MutS domain II LA59_14835 PF01624 MutS domain I LA59_14840 PF00140 Sigma-70 factor, region 1.2 LA59_14840 PF04545 Sigma-70, region 4 LA59_14840 PF04542 Sigma-70 region 2 LA59_14840 PF04539 Sigma-70 region 3 LA59_14845 PF01551 Peptidase family M23 LA59_14845 PF01476 LysM domain LA59_14855 PF01975 Survival protein SurE LA59_14860 PF01142 tRNA pseudouridine synthase D (TruD) LA59_14865 PF02542 YgbB family LA59_14870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LA59_14875 PF04977 Septum formation initiator LA59_14880 PF00113 Enolase, C-terminal TIM barrel domain LA59_14880 PF03952 Enolase, N-terminal domain LA59_14885 PF00117 Glutamine amidotransferase class-I LA59_14885 PF06418 CTP synthase N-terminus LA59_14890 PF03819 MazG nucleotide pyrophosphohydrolase domain LA59_14895 PF02824 TGS domain LA59_14895 PF04607 Region found in RelA / SpoT proteins LA59_14895 PF13291 ACT domain LA59_14900 PF01938 TRAM domain LA59_14900 PF05958 tRNA (Uracil-5-)-methyltransferase LA59_14905 PF00672 HAMP domain LA59_14905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_14905 PF00512 His Kinase A (phospho-acceptor) domain LA59_14905 PF01627 Hpt domain LA59_14905 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LA59_14905 PF00072 Response regulator receiver domain LA59_14910 PF01648 4'-phosphopantetheinyl transferase superfamily LA59_14915 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LA59_14920 PF02565 Recombination protein O C terminal LA59_14920 PF11967 Recombination protein O N terminal LA59_14925 PF07650 KH domain LA59_14925 PF01926 50S ribosome-binding GTPase LA59_14930 PF00035 Double-stranded RNA binding motif LA59_14930 PF14622 Ribonuclease-III-like LA59_14935 PF10502 Signal peptidase, peptidase S26 LA59_14940 PF06421 GTP-binding protein LepA C-terminus LA59_14940 PF00009 Elongation factor Tu GTP binding domain LA59_14940 PF03144 Elongation factor Tu domain 2 LA59_14940 PF00679 Elongation factor G C-terminus LA59_14950 PF17188 MucB/RseB C-terminal domain LA59_14950 PF03888 MucB/RseB N-terminal domain LA59_14955 PF03872 Anti sigma-E protein RseA, N-terminal domain LA59_14955 PF03873 Anti sigma-E protein RseA, C-terminal domain LA59_14960 PF08281 Sigma-70, region 4 LA59_14960 PF04542 Sigma-70 region 2 LA59_14965 PF00890 FAD binding domain LA59_14965 PF02910 Fumarate reductase flavoprotein C-term LA59_14975 PF03937 Flavinator of succinate dehydrogenase LA59_14995 PF01494 FAD binding domain LA59_15000 PF01494 FAD binding domain LA59_15005 PF03695 Uncharacterised protein family (UPF0149) LA59_15010 PF05164 Cell division protein ZapA LA59_15015 PF01812 5-formyltetrahydrofolate cyclo-ligase family LA59_15020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LA59_15025 PF01842 ACT domain LA59_15025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_15025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_15030 PF04402 Protein of unknown function (DUF541) LA59_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_15035 PF03466 LysR substrate binding domain LA59_15040 PF01810 LysE type translocator LA59_15050 PF00924 Mechanosensitive ion channel LA59_15050 PF05552 Conserved TM helix LA59_15055 PF01116 Fructose-bisphosphate aldolase class-II LA59_15060 PF00162 Phosphoglycerate kinase LA59_15065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_15065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_15075 PF02779 Transketolase, pyrimidine binding domain LA59_15075 PF00456 Transketolase, thiamine diphosphate binding domain LA59_15075 PF02780 Transketolase, C-terminal domain LA59_15080 PF02772 S-adenosylmethionine synthetase, central domain LA59_15080 PF00438 S-adenosylmethionine synthetase, N-terminal domain LA59_15080 PF02773 S-adenosylmethionine synthetase, C-terminal domain LA59_15090 PF17283 SprT-like zinc ribbon domain LA59_15090 PF10263 SprT-like family LA59_15095 PF04231 Endonuclease I LA59_15100 PF04452 RNA methyltransferase LA59_15105 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LA59_15105 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LA59_15110 PF02622 Uncharacterized ACR, COG1678 LA59_15115 PF03652 Holliday junction resolvase LA59_15120 PF00437 Type II/IV secretion system protein LA59_15125 PF00437 Type II/IV secretion system protein LA59_15130 PF01168 Alanine racemase, N-terminal domain LA59_15135 PF14748 Pyrroline-5-carboxylate reductase dimerisation LA59_15135 PF03807 NADP oxidoreductase coenzyme F420-dependent LA59_15140 PF02325 YGGT family LA59_15145 PF02594 Uncharacterised ACR, YggU family COG1872 LA59_15155 PF01725 Ham1 family LA59_15160 PF06969 HemN C-terminal domain LA59_15160 PF04055 Radical SAM superfamily LA59_15165 PF04960 Glutaminase LA59_15170 PF02086 D12 class N6 adenine-specific DNA methyltransferase LA59_15175 PF02390 Putative methyltransferase LA59_15180 PF00730 HhH-GPD superfamily base excision DNA repair protein LA59_15180 PF14815 NUDIX domain LA59_15180 PF00633 Helix-hairpin-helix motif LA59_15185 PF04362 Bacterial Fe(2+) trafficking LA59_15190 PF01464 Transglycosylase SLT domain LA59_15190 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LA59_15230 PF00672 HAMP domain LA59_15230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_15230 PF17200 Single Cache domain 2 LA59_15260 PF00171 Aldehyde dehydrogenase family LA59_15305 PF00072 Response regulator receiver domain LA59_15310 PF00356 Bacterial regulatory proteins, lacI family LA59_15310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_15315 PF04794 YdjC-like protein LA59_15320 PF02056 Family 4 glycosyl hydrolase LA59_15320 PF11975 Family 4 glycosyl hydrolase C-terminal domain LA59_15325 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LA59_15330 PF02378 Phosphotransferase system, EIIC LA59_15335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_15355 PF00106 short chain dehydrogenase LA59_15365 PF03739 Lipopolysaccharide export system permease LptF/LptG LA59_15370 PF03739 Lipopolysaccharide export system permease LptF/LptG LA59_15375 PF02789 Cytosol aminopeptidase family, N-terminal domain LA59_15375 PF00883 Cytosol aminopeptidase family, catalytic domain LA59_15380 PF04364 DNA polymerase III chi subunit, HolC LA59_15385 PF10458 Valyl tRNA synthetase tRNA binding arm LA59_15385 PF00133 tRNA synthetases class I (I, L, M and V) LA59_15385 PF08264 Anticodon-binding domain of tRNA LA59_15395 PF00583 Acetyltransferase (GNAT) family LA59_15405 PF06877 Regulator of ribonuclease activity B LA59_15415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA59_15415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA59_15420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LA59_15420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LA59_15425 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain LA59_15425 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain LA59_15430 PF01042 Endoribonuclease L-PSP LA59_15435 PF01553 Acyltransferase LA59_15440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LA59_15445 PF01722 BolA-like protein LA59_15455 PF05494 MlaC protein LA59_15460 PF02470 MlaD protein LA59_15465 PF02405 Permease MlaE LA59_15470 PF00005 ABC transporter LA59_15475 PF01699 Sodium/calcium exchanger protein LA59_15480 PF01380 SIS domain LA59_15480 PF00571 CBS domain LA59_15490 PF03968 OstA-like protein LA59_15495 PF00005 ABC transporter LA59_15495 PF12399 Branched-chain amino acid ATP-binding cassette transporter LA59_15500 PF04552 Sigma-54, DNA binding domain LA59_15500 PF04963 Sigma-54 factor, core binding domain LA59_15500 PF00309 Sigma-54 factor, Activator interacting domain (AID) LA59_15505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LA59_15510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_15515 PF03668 P-loop ATPase protein family LA59_15520 PF00381 PTS HPr component phosphorylation site LA59_15525 PF03448 MgtE intracellular N domain LA59_15525 PF00571 CBS domain LA59_15525 PF01769 Divalent cation transporter LA59_15530 PF01523 Putative modulator of DNA gyrase LA59_15535 PF04751 Protein of unknown function (DUF615) LA59_15540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_15540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_15545 PF00849 RNA pseudouridylate synthase LA59_15555 PF18337 RapA N-terminal Tudor like domain LA59_15555 PF00271 Helicase conserved C-terminal domain LA59_15555 PF18339 RapA N-terminal Tudor like domain 1 LA59_15555 PF00176 SNF2 family N-terminal domain LA59_15555 PF12137 RNA polymerase recycling family C-terminal LA59_15560 PF02562 PhoH-like protein LA59_15560 PF13638 PIN domain LA59_15565 PF01523 Putative modulator of DNA gyrase LA59_15570 PF00795 Carbon-nitrogen hydrolase LA59_15575 PF13502 AsmA-like C-terminal region LA59_15575 PF13116 Protein of unknown function LA59_15580 PF10150 Ribonuclease E/G family LA59_15580 PF00575 S1 RNA binding domain LA59_15585 PF02545 Maf-like protein LA59_15590 PF04093 rod shape-determining protein MreD LA59_15595 PF04085 rod shape-determining protein MreC LA59_15635 PF08334 Type II secretion system (T2SS), protein G LA59_15635 PF07963 Prokaryotic N-terminal methylation motif LA59_15645 PF00482 Type II secretion system (T2SS), protein F LA59_15650 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LA59_15650 PF00437 Type II/IV secretion system protein LA59_15660 PF01471 Putative peptidoglycan binding domain LA59_15660 PF13401 AAA domain LA59_15665 PF00263 Bacterial type II and III secretion system protein LA59_15665 PF03958 Bacterial type II/III secretion system short domain LA59_15685 PF17157 Gammaproteobacterial periplasmic sensor domain LA59_15685 PF00990 Diguanylate cyclase, GGDEF domain LA59_15685 PF00563 EAL domain LA59_15690 PF00436 Single-strand binding protein family LA59_15695 PF00196 Bacterial regulatory proteins, luxR family LA59_15700 PF00483 Nucleotidyl transferase LA59_15705 PF00005 ABC transporter LA59_15705 PF17755 UvrA DNA-binding domain LA59_15705 PF17760 UvrA interaction domain LA59_15715 PF00266 Aminotransferase class-V LA59_15720 PF00696 Amino acid kinase family LA59_15720 PF01842 ACT domain LA59_15725 PF02607 B12 binding domain LA59_15725 PF00809 Pterin binding enzyme LA59_15725 PF02965 Vitamin B12 dependent methionine synthase, activation domain LA59_15725 PF02574 Homocysteine S-methyltransferase LA59_15725 PF02310 B12 binding domain LA59_15730 PF00999 Sodium/hydrogen exchanger family LA59_15785 PF01507 Phosphoadenosine phosphosulfate reductase family LA59_15790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA59_15790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA59_15795 PF00175 Oxidoreductase NAD-binding domain LA59_15795 PF00258 Flavodoxin LA59_15795 PF00667 FAD binding domain LA59_15815 PF01207 Dihydrouridine synthase (Dus) LA59_15910 PF05840 Bacteriophage replication gene A protein (GPA) LA59_15935 PF01475 Ferric uptake regulator family LA59_15945 PF00342 Phosphoglucose isomerase LA59_15950 PF01894 Uncharacterised protein family UPF0047 LA59_15960 PF00842 Alanine racemase, C-terminal domain LA59_15960 PF01168 Alanine racemase, N-terminal domain LA59_15965 PF00772 DnaB-like helicase N terminal domain LA59_15965 PF03796 DnaB-like helicase C terminal domain LA59_15975 PF03948 Ribosomal protein L9, C-terminal domain LA59_15975 PF01281 Ribosomal protein L9, N-terminal domain LA59_15980 PF01084 Ribosomal protein S18 LA59_15985 PF01250 Ribosomal protein S6 LA59_15990 PF00834 Ribulose-phosphate 3 epimerase family LA59_15995 PF02086 D12 class N6 adenine-specific DNA methyltransferase LA59_16005 PF01761 3-dehydroquinate synthase LA59_16010 PF01202 Shikimate kinase LA59_16015 PF11741 AMIN domain LA59_16015 PF00263 Bacterial type II and III secretion system protein LA59_16015 PF07660 Secretin and TonB N terminus short domain LA59_16015 PF03958 Bacterial type II/III secretion system short domain LA59_16040 PF00905 Penicillin binding protein transpeptidase domain LA59_16040 PF00912 Transglycosylase LA59_16040 PF17092 Penicillin-binding protein OB-like domain LA59_16045 PF03466 LysR substrate binding domain LA59_16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_16050 PF08534 Redoxin LA59_16050 PF00462 Glutaredoxin LA59_16055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_16055 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_16065 PF14698 Argininosuccinate lyase C-terminal LA59_16065 PF00583 Acetyltransferase (GNAT) family LA59_16065 PF00206 Lyase LA59_16070 PF00764 Arginosuccinate synthase LA59_16075 PF00696 Amino acid kinase family LA59_16080 PF02774 Semialdehyde dehydrogenase, dimerisation domain LA59_16080 PF01118 Semialdehyde dehydrogenase, NAD binding domain LA59_16085 PF01546 Peptidase family M20/M25/M40 LA59_16085 PF07687 Peptidase dimerisation domain LA59_16090 PF00311 Phosphoenolpyruvate carboxylase LA59_16100 PF02219 Methylenetetrahydrofolate reductase LA59_16105 PF03447 Homoserine dehydrogenase, NAD binding domain LA59_16105 PF00742 Homoserine dehydrogenase LA59_16105 PF00696 Amino acid kinase family LA59_16110 PF01053 Cys/Met metabolism PLP-dependent enzyme LA59_16115 PF01340 Met Apo-repressor, MetJ LA59_16120 PF00390 Malic enzyme, N-terminal domain LA59_16120 PF03949 Malic enzyme, NAD binding domain LA59_16125 PF00210 Ferritin-like domain LA59_16130 PF04324 BFD-like [2Fe-2S] binding domain LA59_16135 PF00009 Elongation factor Tu GTP binding domain LA59_16135 PF03144 Elongation factor Tu domain 2 LA59_16135 PF03143 Elongation factor Tu C-terminal domain LA59_16140 PF03764 Elongation factor G, domain IV LA59_16140 PF00009 Elongation factor Tu GTP binding domain LA59_16140 PF03144 Elongation factor Tu domain 2 LA59_16140 PF00679 Elongation factor G C-terminus LA59_16140 PF14492 Elongation Factor G, domain II LA59_16145 PF00177 Ribosomal protein S7p/S5e LA59_16150 PF00164 Ribosomal protein S12/S23 LA59_16155 PF04077 DsrH like protein LA59_16160 PF02635 DsrE/DsrF-like family LA59_16165 PF02635 DsrE/DsrF-like family LA59_16170 PF13309 HTH domain LA59_16170 PF08348 YheO-like PAS domain LA59_16175 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA59_16175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_16185 PF04102 SlyX LA59_16190 PF01112 Asparaginase LA59_16195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_16205 PF00999 Sodium/hydrogen exchanger family LA59_16205 PF02254 TrkA-N domain LA59_16210 PF02525 Flavodoxin-like fold LA59_16215 PF12848 ABC transporter LA59_16215 PF00005 ABC transporter LA59_16225 PF00561 alpha/beta hydrolase fold LA59_16230 PF06794 Uncharacterised protein family (UPF0270) LA59_16235 PF00485 Phosphoribulokinase / Uridine kinase family LA59_16240 PF13545 Crp-like helix-turn-helix domain LA59_16240 PF00027 Cyclic nucleotide-binding domain LA59_16250 PF00171 Aldehyde dehydrogenase family LA59_16255 PF04958 Arginine N-succinyltransferase beta subunit LA59_16260 PF00202 Aminotransferase class-III LA59_16265 PF00117 Glutamine amidotransferase class-I LA59_16275 PF00267 Gram-negative porin LA59_16285 PF00579 tRNA synthetases class I (W and Y) LA59_16290 PF13419 Haloacid dehalogenase-like hydrolase LA59_16295 PF00588 SpoU rRNA Methylase family LA59_16295 PF08032 RNA 2'-O ribose methyltransferase substrate binding LA59_16300 PF00773 RNB domain LA59_16300 PF17876 Cold shock domain LA59_16300 PF08461 Ribonuclease R winged-helix domain LA59_16300 PF08206 Ribonuclease B OB domain LA59_16300 PF00575 S1 RNA binding domain LA59_16305 PF02082 Transcriptional regulator LA59_16310 PF00175 Oxidoreductase NAD-binding domain LA59_16310 PF00042 Globin LA59_16310 PF00970 Oxidoreductase FAD-binding domain LA59_16315 PF08238 Sel1 repeat LA59_16320 PF00709 Adenylosuccinate synthetase LA59_16325 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) LA59_16330 PF01145 SPFH domain / Band 7 family LA59_16335 PF12221 Bacterial membrane protein N terminal LA59_16335 PF01145 SPFH domain / Band 7 family LA59_16340 PF13167 GTP-binding GTPase N-terminal LA59_16340 PF16360 GTP-binding GTPase Middle Region LA59_16340 PF01926 50S ribosome-binding GTPase LA59_16345 PF17209 Hfq protein LA59_16355 PF08676 MutL C terminal dimerisation domain LA59_16355 PF01119 DNA mismatch repair protein, C-terminal domain LA59_16360 PF01520 N-acetylmuramoyl-L-alanine amidase LA59_16365 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LA59_16370 PF08331 Domain of unknown function (DUF1730) LA59_16435 PF00929 Exonuclease LA59_16440 PF03193 RsgA GTPase LA59_16445 PF02666 Phosphatidylserine decarboxylase LA59_16450 PF00939 Sodium:sulfate symporter transmembrane region LA59_16455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_16455 PF00672 HAMP domain LA59_16465 PF01676 Metalloenzyme superfamily LA59_16465 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LA59_16470 PF00581 Rhodanese-like domain LA59_16475 PF02556 Preprotein translocase subunit SecB LA59_16480 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LA59_16480 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LA59_16485 PF06426 Serine acetyltransferase, N-terminal LA59_16485 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_16490 PF01551 Peptidase family M23 LA59_16500 PF08360 QacR-like protein, C-terminal region LA59_16500 PF00440 Bacterial regulatory proteins, tetR family LA59_16510 PF00152 tRNA synthetases class II (D, K and N) LA59_16515 PF00890 FAD binding domain LA59_16515 PF02910 Fumarate reductase flavoprotein C-term LA59_16520 PF13183 4Fe-4S dicluster domain LA59_16520 PF13085 2Fe-2S iron-sulfur cluster binding domain LA59_16525 PF02300 Fumarate reductase subunit C LA59_16530 PF02313 Fumarate reductase subunit D LA59_16545 PF08207 Elongation factor P (EF-P) KOW-like domain LA59_16545 PF09285 Elongation factor P, C-terminal LA59_16545 PF01132 Elongation factor P (EF-P) OB domain LA59_16550 PF04055 Radical SAM superfamily LA59_16555 PF02308 MgtC family LA59_16565 PF00118 TCP-1/cpn60 chaperonin family LA59_16570 PF00166 Chaperonin 10 Kd subunit LA59_16575 PF01554 MatE LA59_16580 PF00365 Phosphofructokinase LA59_16585 PF16916 Dimerisation domain of Zinc Transporter LA59_16585 PF01545 Cation efflux family LA59_16590 PF07813 LTXXQ motif family protein LA59_16595 PF00486 Transcriptional regulatory protein, C terminal LA59_16595 PF00072 Response regulator receiver domain LA59_16600 PF00512 His Kinase A (phospho-acceptor) domain LA59_16600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_16600 PF00672 HAMP domain LA59_16600 PF16527 Two-component sensor protein CpxA, periplasmic domain LA59_16605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LA59_16605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LA59_16610 PF00588 SpoU rRNA Methylase family LA59_16615 PF04186 FxsA cytoplasmic membrane protein LA59_16620 PF00206 Lyase LA59_16620 PF10415 Fumarase C C-terminus LA59_16625 PF03605 Anaerobic c4-dicarboxylate membrane transporter LA59_16630 PF02683 Cytochrome C biogenesis protein transmembrane region LA59_16630 PF11412 Disulphide bond corrector protein DsbC LA59_16635 PF00072 Response regulator receiver domain LA59_16635 PF00196 Bacterial regulatory proteins, luxR family LA59_16640 PF01914 MarC family integral membrane protein LA59_16650 PF00474 Sodium:solute symporter family LA59_16665 PF00206 Lyase LA59_16665 PF10415 Fumarase C C-terminus LA59_16670 PF00072 Response regulator receiver domain LA59_16670 PF00672 HAMP domain LA59_16670 PF00512 His Kinase A (phospho-acceptor) domain LA59_16670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_16670 PF01627 Hpt domain LA59_16675 PF12832 MFS_1 like family LA59_16690 PF00501 AMP-binding enzyme LA59_16690 PF13193 AMP-binding enzyme C-terminal domain LA59_16690 PF16177 Acetyl-coenzyme A synthetase N-terminus LA59_16695 PF01220 Dehydroquinase class II LA59_16700 PF00364 Biotin-requiring enzyme LA59_16705 PF02785 Biotin carboxylase C-terminal domain LA59_16705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LA59_16705 PF00289 Biotin carboxylase, N-terminal domain LA59_16715 PF01207 Dihydrouridine synthase (Dus) LA59_16720 PF02954 Bacterial regulatory protein, Fis family LA59_16725 PF00563 EAL domain LA59_16725 PF00990 Diguanylate cyclase, GGDEF domain LA59_16725 PF03707 Bacterial signalling protein N terminal repeat LA59_16725 PF13188 PAS domain LA59_16760 PF01565 FAD binding domain LA59_16760 PF09330 D-lactate dehydrogenase, membrane binding LA59_16765 PF03466 LysR substrate binding domain LA59_16765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_16775 PF05762 VWA domain containing CoxE-like protein LA59_16780 PF12592 Protein of unknown function (DUF3763) LA59_16780 PF07728 AAA domain (dynein-related subfamily) LA59_16780 PF17868 AAA lid domain LA59_16790 PF01212 Beta-eliminating lyase LA59_16795 PF00034 Cytochrome c LA59_16800 PF03606 C4-dicarboxylate anaerobic carrier LA59_16810 PF07690 Major Facilitator Superfamily LA59_16820 PF08212 Lipocalin-like domain LA59_16850 PF00704 Glycosyl hydrolases family 18 LA59_16860 PF13476 AAA domain LA59_16865 PF00149 Calcineurin-like phosphoesterase LA59_16865 PF12320 Type 5 capsule protein repressor C-terminal domain LA59_16890 PF03527 RHS protein LA59_16905 PF04717 Type VI secretion system, phage-baseplate injector LA59_16915 PF00004 ATPase family associated with various cellular activities (AAA) LA59_16915 PF17871 AAA lid domain LA59_16915 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_16915 PF07724 AAA domain (Cdc48 subfamily) LA59_16975 PF13677 Membrane MotB of proton-channel complex MotA/MotB LA59_16975 PF00691 OmpA family LA59_16995 PF03793 PASTA domain LA59_16995 PF00069 Protein kinase domain LA59_17020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_17025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA59_17035 PF01757 Acyltransferase family LA59_17050 PF01645 Conserved region in glutamate synthase LA59_17050 PF13187 4Fe-4S dicluster domain LA59_17060 PF00753 Metallo-beta-lactamase superfamily LA59_17065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA59_17135 PF00072 Response regulator receiver domain LA59_17135 PF00990 Diguanylate cyclase, GGDEF domain LA59_17140 PF00378 Enoyl-CoA hydratase/isomerase LA59_17145 PF01594 AI-2E family transporter LA59_17150 PF14602 Hexapeptide repeat of succinyl-transferase LA59_17150 PF12464 Maltose acetyltransferase LA59_17160 PF02743 Cache domain LA59_17160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_17160 PF00672 HAMP domain LA59_17170 PF01292 Prokaryotic cytochrome b561 LA59_17180 PF08525 Opacity-associated protein A N-terminal motif LA59_17180 PF01476 LysM domain LA59_17180 PF01551 Peptidase family M23 LA59_17185 PF03466 LysR substrate binding domain LA59_17185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_17200 PF00211 Adenylate and Guanylate cyclase catalytic domain LA59_17200 PF00072 Response regulator receiver domain LA59_17215 PF08361 MAATS-type transcriptional repressor, C-terminal region LA59_17215 PF00440 Bacterial regulatory proteins, tetR family LA59_17230 PF18267 Rubredoxin NAD+ reductase C-terminal domain LA59_17230 PF04324 BFD-like [2Fe-2S] binding domain LA59_17230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA59_17230 PF13806 Rieske-like [2Fe-2S] domain LA59_17230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA59_17230 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_17235 PF00005 ABC transporter LA59_17240 PF00528 Binding-protein-dependent transport system inner membrane component LA59_17245 PF00005 ABC transporter LA59_17250 PF03861 ANTAR domain LA59_17250 PF08376 Nitrate and nitrite sensing LA59_17255 PF01738 Dienelactone hydrolase family LA59_17260 PF02885 Glycosyl transferase family, helical bundle domain LA59_17260 PF00591 Glycosyl transferase family, a/b domain LA59_17265 PF10414 Sirohaem synthase dimerisation region LA59_17265 PF14824 Sirohaem biosynthesis protein central LA59_17265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_17270 PF00384 Molybdopterin oxidoreductase LA59_17270 PF01568 Molydopterin dinucleotide binding domain LA59_17270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_17275 PF00583 Acetyltransferase (GNAT) family LA59_17280 PF00990 Diguanylate cyclase, GGDEF domain LA59_17280 PF08448 PAS fold LA59_17280 PF00563 EAL domain LA59_17285 PF03222 Tryptophan/tyrosine permease family LA59_17290 PF08448 PAS fold LA59_17290 PF00990 Diguanylate cyclase, GGDEF domain LA59_17300 PF00082 Subtilase family LA59_17300 PF01483 Proprotein convertase P-domain LA59_17310 PF00245 Alkaline phosphatase LA59_17325 PF00486 Transcriptional regulatory protein, C terminal LA59_17325 PF00072 Response regulator receiver domain LA59_17355 PF04314 Copper chaperone PCu(A)C LA59_17360 PF00012 Hsp70 protein LA59_17375 PF00676 Dehydrogenase E1 component LA59_17380 PF02780 Transketolase, C-terminal domain LA59_17380 PF02779 Transketolase, pyrimidine binding domain LA59_17385 PF02817 e3 binding domain LA59_17385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LA59_17385 PF00364 Biotin-requiring enzyme LA59_17390 PF00766 Electron transfer flavoprotein FAD-binding domain LA59_17390 PF01012 Electron transfer flavoprotein domain LA59_17395 PF01012 Electron transfer flavoprotein domain LA59_17405 PF03466 LysR substrate binding domain LA59_17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_17420 PF02424 ApbE family LA59_17425 PF00890 FAD binding domain LA59_17425 PF04205 FMN-binding domain LA59_17425 PF03358 NADPH-dependent FMN reductase LA59_17430 PF00989 PAS fold LA59_17430 PF00512 His Kinase A (phospho-acceptor) domain LA59_17430 PF16736 Single Cache-like LA59_17430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_17435 PF00072 Response regulator receiver domain LA59_17435 PF00486 Transcriptional regulatory protein, C terminal LA59_17450 PF13417 Glutathione S-transferase, N-terminal domain LA59_17450 PF00043 Glutathione S-transferase, C-terminal domain LA59_17455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_17455 PF03466 LysR substrate binding domain LA59_17465 PF00528 Binding-protein-dependent transport system inner membrane component LA59_17470 PF00528 Binding-protein-dependent transport system inner membrane component LA59_17475 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_17480 PF00005 ABC transporter LA59_17485 PF02743 Cache domain LA59_17485 PF00672 HAMP domain LA59_17485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_17515 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_17525 PF00171 Aldehyde dehydrogenase family LA59_17535 PF03466 LysR substrate binding domain LA59_17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_17540 PF00871 Acetokinase family LA59_17545 PF00270 DEAD/DEAH box helicase LA59_17545 PF00271 Helicase conserved C-terminal domain LA59_17545 PF03880 DbpA RNA binding domain LA59_17550 PF08206 Ribonuclease B OB domain LA59_17550 PF00773 RNB domain LA59_17550 PF00575 S1 RNA binding domain LA59_17555 PF12833 Helix-turn-helix domain LA59_17565 PF12849 PBP superfamily domain LA59_17570 PF01575 MaoC like domain LA59_17590 PF07517 SecA DEAD-like domain LA59_17590 PF07516 SecA Wing and Scaffold domain LA59_17590 PF02810 SEC-C motif LA59_17590 PF01043 SecA preprotein cross-linking domain LA59_17625 PF13186 Iron-sulfur cluster-binding domain LA59_17625 PF04055 Radical SAM superfamily LA59_17645 PF00005 ABC transporter LA59_17650 PF00196 Bacterial regulatory proteins, luxR family LA59_17650 PF00563 EAL domain LA59_17670 PF00271 Helicase conserved C-terminal domain LA59_17670 PF00270 DEAD/DEAH box helicase LA59_17675 PF13426 PAS domain LA59_17675 PF08448 PAS fold LA59_17675 PF08447 PAS fold LA59_17675 PF00563 EAL domain LA59_17675 PF05231 MASE1 LA59_17675 PF00990 Diguanylate cyclase, GGDEF domain LA59_17680 PF02492 CobW/HypB/UreG, nucleotide-binding domain LA59_17680 PF07683 Cobalamin synthesis protein cobW C-terminal domain LA59_17690 PF01470 Pyroglutamyl peptidase LA59_17705 PF00593 TonB dependent receptor LA59_17705 PF07715 TonB-dependent Receptor Plug Domain LA59_17715 PF13411 MerR HTH family regulatory protein LA59_17720 PF00005 ABC transporter LA59_17725 PF01032 FecCD transport family LA59_17730 PF01032 FecCD transport family LA59_17735 PF01497 Periplasmic binding protein LA59_17745 PF01048 Phosphorylase superfamily LA59_17750 PF04973 Nicotinamide mononucleotide transporter LA59_17760 PF00356 Bacterial regulatory proteins, lacI family LA59_17765 PF00294 pfkB family carbohydrate kinase LA59_17770 PF13407 Periplasmic binding protein domain LA59_17775 PF02653 Branched-chain amino acid transport system / permease component LA59_17780 PF00005 ABC transporter LA59_17785 PF05025 RbsD / FucU transport protein family LA59_17790 PF00563 EAL domain LA59_17790 PF00990 Diguanylate cyclase, GGDEF domain LA59_17795 PF01048 Phosphorylase superfamily LA59_17800 PF01177 Asp/Glu/Hydantoin racemase LA59_17825 PF09335 SNARE associated Golgi protein LA59_17850 PF04116 Fatty acid hydroxylase superfamily LA59_17865 PF00072 Response regulator receiver domain LA59_17865 PF00512 His Kinase A (phospho-acceptor) domain LA59_17865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_17865 PF09308 LuxQ, periplasmic LA59_17870 PF03150 Di-haem cytochrome c peroxidase LA59_17870 PF00034 Cytochrome c LA59_17875 PF09308 LuxQ, periplasmic LA59_17875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_17875 PF00512 His Kinase A (phospho-acceptor) domain LA59_17875 PF00072 Response regulator receiver domain LA59_17880 PF00990 Diguanylate cyclase, GGDEF domain LA59_17880 PF00563 EAL domain LA59_17880 PF03707 Bacterial signalling protein N terminal repeat LA59_17900 PF16200 C-terminal region of band_7 LA59_17900 PF01145 SPFH domain / Band 7 family LA59_17910 PF00881 Nitroreductase family LA59_17915 PF00005 ABC transporter LA59_17915 PF00571 CBS domain LA59_17920 PF00528 Binding-protein-dependent transport system inner membrane component LA59_17925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LA59_17930 PF00732 GMC oxidoreductase LA59_17930 PF05199 GMC oxidoreductase LA59_17935 PF00171 Aldehyde dehydrogenase family LA59_17940 PF00440 Bacterial regulatory proteins, tetR family LA59_17940 PF13977 BetI-type transcriptional repressor, C-terminal LA59_17950 PF08448 PAS fold LA59_17950 PF08447 PAS fold LA59_17950 PF05231 MASE1 LA59_17950 PF13426 PAS domain LA59_17950 PF00990 Diguanylate cyclase, GGDEF domain LA59_17950 PF00563 EAL domain LA59_17970 PF01553 Acyltransferase LA59_18000 PF00691 OmpA family LA59_18000 PF13488 Glycine zipper LA59_18035 PF00437 Type II/IV secretion system protein LA59_18040 PF10609 NUBPL iron-transfer P-loop NTPase LA59_18050 PF04972 BON domain LA59_18050 PF13629 Pilus formation protein N terminal region LA59_18050 PF00263 Bacterial type II and III secretion system protein LA59_18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_18070 PF03466 LysR substrate binding domain LA59_18075 PF12146 Serine aminopeptidase, S33 LA59_18090 PF05762 VWA domain containing CoxE-like protein LA59_18095 PF07728 AAA domain (dynein-related subfamily) LA59_18095 PF17868 AAA lid domain LA59_18095 PF12592 Protein of unknown function (DUF3763) LA59_18100 PF00478 IMP dehydrogenase / GMP reductase domain LA59_18105 PF01256 Carbohydrate kinase LA59_18105 PF03853 YjeF-related protein N-terminus LA59_18115 PF00072 Response regulator receiver domain LA59_18120 PF00248 Aldo/keto reductase family LA59_18135 PF00654 Voltage gated chloride channel LA59_18145 PF01566 Natural resistance-associated macrophage protein LA59_18150 PF01227 GTP cyclohydrolase I LA59_18155 PF03453 MoeA N-terminal region (domain I and II) LA59_18155 PF03454 MoeA C-terminal region (domain IV) LA59_18155 PF00994 Probable molybdopterin binding domain LA59_18160 PF00899 ThiF family LA59_18165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA59_18170 PF00175 Oxidoreductase NAD-binding domain LA59_18175 PF04443 Acyl-protein synthetase, LuxE LA59_18180 PF00296 Luciferase-like monooxygenase LA59_18185 PF00296 Luciferase-like monooxygenase LA59_18190 PF02273 Acyl transferase LA59_18195 PF05893 Acyl-CoA reductase (LuxC) LA59_18210 PF00581 Rhodanese-like domain LA59_18215 PF03707 Bacterial signalling protein N terminal repeat LA59_18215 PF00563 EAL domain LA59_18215 PF00990 Diguanylate cyclase, GGDEF domain LA59_18220 PF00704 Glycosyl hydrolases family 18 LA59_18220 PF08329 Chitinase A, N-terminal domain LA59_18230 PF00923 Transaldolase/Fructose-6-phosphate aldolase LA59_18235 PF02779 Transketolase, pyrimidine binding domain LA59_18235 PF02780 Transketolase, C-terminal domain LA59_18235 PF00456 Transketolase, thiamine diphosphate binding domain LA59_18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_18240 PF08447 PAS fold LA59_18245 PF07690 Major Facilitator Superfamily LA59_18250 PF00793 DAHP synthetase I family LA59_18255 PF01389 OmpA-like transmembrane domain LA59_18255 PF00691 OmpA family LA59_18260 PF01040 UbiA prenyltransferase family LA59_18265 PF02628 Cytochrome oxidase assembly protein LA59_18285 PF00510 Cytochrome c oxidase subunit III LA59_18290 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LA59_18295 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA59_18300 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LA59_18300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LA59_18305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LA59_18305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LA59_18305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LA59_18305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LA59_18315 PF01810 LysE type translocator LA59_18335 PF01557 Fumarylacetoacetate (FAA) hydrolase family LA59_18350 PF00892 EamA-like transporter family LA59_18355 PF00462 Glutaredoxin LA59_18365 PF07690 Major Facilitator Superfamily LA59_18370 PF03466 LysR substrate binding domain LA59_18370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_18375 PF08447 PAS fold LA59_18375 PF08448 PAS fold LA59_18375 PF00563 EAL domain LA59_18375 PF00990 Diguanylate cyclase, GGDEF domain LA59_18380 PF08525 Opacity-associated protein A N-terminal motif LA59_18380 PF01551 Peptidase family M23 LA59_18380 PF01476 LysM domain LA59_18400 PF02743 Cache domain LA59_18400 PF00672 HAMP domain LA59_18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_18410 PF03222 Tryptophan/tyrosine permease family LA59_18445 PF00107 Zinc-binding dehydrogenase LA59_18445 PF08240 Alcohol dehydrogenase GroES-like domain LA59_18450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_18450 PF02378 Phosphotransferase system, EIIC LA59_18455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_18460 PF00392 Bacterial regulatory proteins, gntR family LA59_18460 PF07702 UTRA domain LA59_18465 PF02378 Phosphotransferase system, EIIC LA59_18465 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_18465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_18470 PF01074 Glycosyl hydrolases family 38 N-terminal domain LA59_18470 PF07748 Glycosyl hydrolases family 38 C-terminal domain LA59_18470 PF09261 Alpha mannosidase middle domain LA59_18475 PF01238 Phosphomannose isomerase type I LA59_18480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_18490 PF01638 HxlR-like helix-turn-helix LA59_18505 PF01758 Sodium Bile acid symporter family LA59_18520 PF01161 Phosphatidylethanolamine-binding protein LA59_18525 PF02567 Phenazine biosynthesis-like protein LA59_18530 PF02525 Flavodoxin-like fold LA59_18535 PF00999 Sodium/hydrogen exchanger family LA59_18535 PF02254 TrkA-N domain LA59_18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_18545 PF03466 LysR substrate binding domain LA59_18575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_18575 PF03466 LysR substrate binding domain LA59_18595 PF16197 Ketoacyl-synthetase C-terminal extension LA59_18595 PF00109 Beta-ketoacyl synthase, N-terminal domain LA59_18595 PF02801 Beta-ketoacyl synthase, C-terminal domain LA59_18595 PF08659 KR domain LA59_18595 PF08240 Alcohol dehydrogenase GroES-like domain LA59_18595 PF00107 Zinc-binding dehydrogenase LA59_18595 PF14765 Polyketide synthase dehydratase LA59_18595 PF00698 Acyl transferase domain LA59_18595 PF00550 Phosphopantetheine attachment site LA59_18600 PF00128 Alpha amylase, catalytic domain LA59_18620 PF01584 CheW-like domain LA59_18620 PF00072 Response regulator receiver domain LA59_18630 PF01243 Pyridoxamine 5'-phosphate oxidase LA59_18635 PF06228 Haem utilisation ChuX/HutX LA59_18640 PF04055 Radical SAM superfamily LA59_18645 PF03544 Gram-negative bacterial TonB protein C-terminal LA59_18650 PF01618 MotA/TolQ/ExbB proton channel family LA59_18655 PF02472 Biopolymer transport protein ExbD/TolR LA59_18665 PF01032 FecCD transport family LA59_18670 PF00005 ABC transporter LA59_18675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_18675 PF00672 HAMP domain LA59_18685 PF00005 ABC transporter LA59_18695 PF01042 Endoribonuclease L-PSP LA59_18705 PF02838 Glycosyl hydrolase family 20, domain 2 LA59_18705 PF00728 Glycosyl hydrolase family 20, catalytic domain LA59_18710 PF01081 KDPG and KHG aldolase LA59_18715 PF00294 pfkB family carbohydrate kinase LA59_18720 PF00474 Sodium:solute symporter family LA59_18730 PF07969 Amidohydrolase family LA59_18740 PF02685 Glucokinase LA59_18740 PF01418 Helix-turn-helix domain, rpiR family LA59_18740 PF01380 SIS domain LA59_18755 PF12838 4Fe-4S dicluster domain LA59_18755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_18755 PF00384 Molybdopterin oxidoreductase LA59_18755 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LA59_18755 PF01568 Molydopterin dinucleotide binding domain LA59_18775 PF00873 AcrB/AcrD/AcrF family LA59_18795 PF00583 Acetyltransferase (GNAT) family LA59_18795 PF13673 Acetyltransferase (GNAT) domain LA59_18815 PF05193 Peptidase M16 inactive domain LA59_18815 PF00675 Insulinase (Peptidase family M16) LA59_18820 PF00005 ABC transporter LA59_18820 PF06472 ABC transporter transmembrane region 2 LA59_18825 PF07715 TonB-dependent Receptor Plug Domain LA59_18835 PF01618 MotA/TolQ/ExbB proton channel family LA59_18840 PF01618 MotA/TolQ/ExbB proton channel family LA59_18845 PF02472 Biopolymer transport protein ExbD/TolR LA59_18860 PF00293 NUDIX domain LA59_18870 PF00034 Cytochrome c LA59_18870 PF14376 Haem-binding domain LA59_18870 PF03150 Di-haem cytochrome c peroxidase LA59_18875 PF13302 Acetyltransferase (GNAT) domain LA59_18885 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LA59_18885 PF00326 Prolyl oligopeptidase family LA59_18890 PF00005 ABC transporter LA59_18890 PF16326 ABC transporter C-terminal domain LA59_18890 PF12848 ABC transporter LA59_18895 PF01980 tRNA-methyltransferase O LA59_18915 PF07690 Major Facilitator Superfamily LA59_18930 PF03466 LysR substrate binding domain LA59_18930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_18935 PF00582 Universal stress protein family LA59_18945 PF08220 DeoR-like helix-turn-helix domain LA59_18945 PF00455 DeoR C terminal sensor domain LA59_18950 PF03009 Glycerophosphoryl diester phosphodiesterase family LA59_18955 PF13416 Bacterial extracellular solute-binding protein LA59_18960 PF00528 Binding-protein-dependent transport system inner membrane component LA59_18965 PF00528 Binding-protein-dependent transport system inner membrane component LA59_18970 PF17912 MalK OB fold domain LA59_18970 PF00005 ABC transporter LA59_18990 PF01047 MarR family LA59_19005 PF07683 Cobalamin synthesis protein cobW C-terminal domain LA59_19005 PF02492 CobW/HypB/UreG, nucleotide-binding domain LA59_19010 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_19015 PF01979 Amidohydrolase family LA59_19025 PF01734 Patatin-like phospholipase LA59_19030 PF02678 Pirin LA59_19030 PF05726 Pirin C-terminal cupin domain LA59_19035 PF00313 'Cold-shock' DNA-binding domain LA59_19050 PF00962 Adenosine/AMP deaminase LA59_19055 PF17151 Periplasmic sensor domain LA59_19055 PF00990 Diguanylate cyclase, GGDEF domain LA59_19060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19060 PF03466 LysR substrate binding domain LA59_19075 PF08534 Redoxin LA59_19075 PF00462 Glutaredoxin LA59_19080 PF08241 Methyltransferase domain LA59_19090 PF08448 PAS fold LA59_19090 PF00990 Diguanylate cyclase, GGDEF domain LA59_19095 PF07943 Penicillin-binding protein 5, C-terminal domain LA59_19095 PF00768 D-alanyl-D-alanine carboxypeptidase LA59_19100 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_19105 PF02525 Flavodoxin-like fold LA59_19110 PF03466 LysR substrate binding domain LA59_19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19115 PF02798 Glutathione S-transferase, N-terminal domain LA59_19120 PF00440 Bacterial regulatory proteins, tetR family LA59_19120 PF02909 Tetracyclin repressor-like, C-terminal domain LA59_19125 PF01872 RibD C-terminal domain LA59_19220 PF00106 short chain dehydrogenase LA59_19230 PF00375 Sodium:dicarboxylate symporter family LA59_19235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_19245 PF00127 Copper binding proteins, plastocyanin/azurin family LA59_19250 PF02378 Phosphotransferase system, EIIC LA59_19255 PF03707 Bacterial signalling protein N terminal repeat LA59_19255 PF00990 Diguanylate cyclase, GGDEF domain LA59_19255 PF00563 EAL domain LA59_19265 PF00691 OmpA family LA59_19290 PF00005 ABC transporter LA59_19295 PF00528 Binding-protein-dependent transport system inner membrane component LA59_19300 PF00528 Binding-protein-dependent transport system inner membrane component LA59_19305 PF12849 PBP superfamily domain LA59_19310 PF00512 His Kinase A (phospho-acceptor) domain LA59_19310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_19310 PF02743 Cache domain LA59_19315 PF00072 Response regulator receiver domain LA59_19315 PF01966 HD domain LA59_19320 PF14602 Hexapeptide repeat of succinyl-transferase LA59_19320 PF12464 Maltose acetyltransferase LA59_19325 PF00529 HlyD membrane-fusion protein of T1SS LA59_19330 PF00005 ABC transporter LA59_19330 PF00664 ABC transporter transmembrane region LA59_19340 PF00196 Bacterial regulatory proteins, luxR family LA59_19345 PF00196 Bacterial regulatory proteins, luxR family LA59_19355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_19355 PF02743 Cache domain LA59_19355 PF00672 HAMP domain LA59_19360 PF07726 ATPase family associated with various cellular activities (AAA) LA59_19360 PF17863 AAA lid domain LA59_19365 PF01882 Protein of unknown function DUF58 LA59_19375 PF13519 von Willebrand factor type A domain LA59_19380 PF13519 von Willebrand factor type A domain LA59_19395 PF00005 ABC transporter LA59_19400 PF00528 Binding-protein-dependent transport system inner membrane component LA59_19405 PF00528 Binding-protein-dependent transport system inner membrane component LA59_19410 PF12849 PBP superfamily domain LA59_19415 PF02743 Cache domain LA59_19415 PF00672 HAMP domain LA59_19415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_19425 PF00270 DEAD/DEAH box helicase LA59_19425 PF00271 Helicase conserved C-terminal domain LA59_19435 PF17969 L,D-transpeptidase C-terminal domain LA59_19435 PF01476 LysM domain LA59_19435 PF03734 L,D-transpeptidase catalytic domain LA59_19440 PF03441 FAD binding domain of DNA photolyase LA59_19440 PF00875 DNA photolyase LA59_19450 PF08349 Protein of unknown function (DUF1722) LA59_19455 PF01048 Phosphorylase superfamily LA59_19470 PF00990 Diguanylate cyclase, GGDEF domain LA59_19480 PF11742 Protein of unknown function (DUF3302) LA59_19485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_19485 PF00529 HlyD membrane-fusion protein of T1SS LA59_19490 PF07155 ECF-type riboflavin transporter, S component LA59_19495 PF00005 ABC transporter LA59_19495 PF12558 ATP-binding cassette cobalt transporter LA59_19510 PF01022 Bacterial regulatory protein, arsR family LA59_19515 PF12801 4Fe-4S binding domain LA59_19515 PF12837 4Fe-4S binding domain LA59_19520 PF12800 4Fe-4S binding domain LA59_19520 PF12838 4Fe-4S dicluster domain LA59_19525 PF13302 Acetyltransferase (GNAT) domain LA59_19540 PF12945 Flagellar protein YcgR LA59_19540 PF07238 PilZ domain LA59_19545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_19545 PF12729 Four helix bundle sensory module for signal transduction LA59_19545 PF00672 HAMP domain LA59_19550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_19550 PF12729 Four helix bundle sensory module for signal transduction LA59_19550 PF00672 HAMP domain LA59_19555 PF05362 Lon protease (S16) C-terminal proteolytic domain LA59_19555 PF13654 AAA domain LA59_19565 PF00005 ABC transporter LA59_19565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_19570 PF00326 Prolyl oligopeptidase family LA59_19570 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LA59_19575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19575 PF03466 LysR substrate binding domain LA59_19580 PF02652 L-lactate permease LA59_19585 PF01070 FMN-dependent dehydrogenase LA59_19595 PF00924 Mechanosensitive ion channel LA59_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19600 PF03466 LysR substrate binding domain LA59_19610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA59_19610 PF13378 Enolase C-terminal domain-like LA59_19615 PF03144 Elongation factor Tu domain 2 LA59_19615 PF00009 Elongation factor Tu GTP binding domain LA59_19615 PF03764 Elongation factor G, domain IV LA59_19615 PF14492 Elongation Factor G, domain II LA59_19615 PF00679 Elongation factor G C-terminus LA59_19635 PF02001 Protein of unknown function DUF134 LA59_19645 PF00528 Binding-protein-dependent transport system inner membrane component LA59_19650 PF00571 CBS domain LA59_19650 PF00005 ABC transporter LA59_19665 PF01048 Phosphorylase superfamily LA59_19670 PF00582 Universal stress protein family LA59_19675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19675 PF03466 LysR substrate binding domain LA59_19700 PF06942 GlpM protein LA59_19715 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LA59_19715 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LA59_19725 PF00857 Isochorismatase family LA59_19730 PF00080 Copper/zinc superoxide dismutase (SODC) LA59_19740 PF00199 Catalase LA59_19740 PF06628 Catalase-related immune-responsive LA59_19760 PF01238 Phosphomannose isomerase type I LA59_19765 PF00155 Aminotransferase class I and II LA59_19770 PF02378 Phosphotransferase system, EIIC LA59_19770 PF00367 phosphotransferase system, EIIB LA59_19775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_19775 PF00356 Bacterial regulatory proteins, lacI family LA59_19780 PF00455 DeoR C terminal sensor domain LA59_19780 PF08220 DeoR-like helix-turn-helix domain LA59_19785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_19790 PF01625 Peptide methionine sulfoxide reductase LA59_19790 PF01641 SelR domain LA59_19800 PF00367 phosphotransferase system, EIIB LA59_19800 PF02378 Phosphotransferase system, EIIC LA59_19805 PF01546 Peptidase family M20/M25/M40 LA59_19810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LA59_19815 PF00456 Transketolase, thiamine diphosphate binding domain LA59_19815 PF02780 Transketolase, C-terminal domain LA59_19815 PF02779 Transketolase, pyrimidine binding domain LA59_19820 PF00923 Transaldolase/Fructose-6-phosphate aldolase LA59_19825 PF13419 Haloacid dehalogenase-like hydrolase LA59_19830 PF00465 Iron-containing alcohol dehydrogenase LA59_19845 PF00455 DeoR C terminal sensor domain LA59_19845 PF08220 DeoR-like helix-turn-helix domain LA59_19860 PF17678 Glycosyl hydrolase family 92 N-terminal domain LA59_19860 PF07971 Glycosyl hydrolase family 92 LA59_19865 PF07971 Glycosyl hydrolase family 92 LA59_19865 PF17678 Glycosyl hydrolase family 92 N-terminal domain LA59_19875 PF17678 Glycosyl hydrolase family 92 N-terminal domain LA59_19875 PF07971 Glycosyl hydrolase family 92 LA59_19880 PF07971 Glycosyl hydrolase family 92 LA59_19880 PF17678 Glycosyl hydrolase family 92 N-terminal domain LA59_19890 PF03466 LysR substrate binding domain LA59_19890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19895 PF01810 LysE type translocator LA59_19900 PF00581 Rhodanese-like domain LA59_19915 PF00440 Bacterial regulatory proteins, tetR family LA59_19915 PF13977 BetI-type transcriptional repressor, C-terminal LA59_19940 PF13409 Glutathione S-transferase, N-terminal domain LA59_19945 PF03358 NADPH-dependent FMN reductase LA59_19950 PF03466 LysR substrate binding domain LA59_19950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_19955 PF09905 DNA-binding protein VF530 LA59_19960 PF12848 ABC transporter LA59_19960 PF00005 ABC transporter LA59_19975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_19980 PF02567 Phenazine biosynthesis-like protein LA59_19995 PF05114 Protein of unknown function (DUF692) LA59_20010 PF01654 Cytochrome bd terminal oxidase subunit I LA59_20015 PF02322 Cytochrome bd terminal oxidase subunit II LA59_20030 PF13344 Haloacid dehalogenase-like hydrolase LA59_20030 PF00293 NUDIX domain LA59_20045 PF04055 Radical SAM superfamily LA59_20050 PF00923 Transaldolase/Fructose-6-phosphate aldolase LA59_20065 PF00672 HAMP domain LA59_20065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_20065 PF00512 His Kinase A (phospho-acceptor) domain LA59_20070 PF00486 Transcriptional regulatory protein, C terminal LA59_20070 PF00072 Response regulator receiver domain LA59_20080 PF00583 Acetyltransferase (GNAT) family LA59_20090 PF07690 Major Facilitator Superfamily LA59_20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_20095 PF03466 LysR substrate binding domain LA59_20105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_20105 PF03466 LysR substrate binding domain LA59_20110 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family LA59_20120 PF00892 EamA-like transporter family LA59_20140 PF13533 Biotin-lipoyl like LA59_20150 PF01594 AI-2E family transporter LA59_20155 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) LA59_20180 PF09905 DNA-binding protein VF530 LA59_20185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_20185 PF03466 LysR substrate binding domain LA59_20195 PF00881 Nitroreductase family LA59_20205 PF00686 Starch binding domain LA59_20205 PF00128 Alpha amylase, catalytic domain LA59_20210 PF00768 D-alanyl-D-alanine carboxypeptidase LA59_20210 PF07943 Penicillin-binding protein 5, C-terminal domain LA59_20215 PF00561 alpha/beta hydrolase fold LA59_20240 PF00268 Ribonucleotide reductase, small chain LA59_20245 PF02867 Ribonucleotide reductase, barrel domain LA59_20245 PF03477 ATP cone domain LA59_20245 PF00317 Ribonucleotide reductase, all-alpha domain LA59_20260 PF00875 DNA photolyase LA59_20260 PF03441 FAD binding domain of DNA photolyase LA59_20265 PF02469 Fasciclin domain LA59_20275 PF01734 Patatin-like phospholipase LA59_20280 PF01914 MarC family integral membrane protein LA59_20285 PF00881 Nitroreductase family LA59_20290 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LA59_20290 PF10531 SLBB domain LA59_20290 PF02563 Polysaccharide biosynthesis/export protein LA59_20295 PF01451 Low molecular weight phosphotyrosine protein phosphatase LA59_20300 PF02706 Chain length determinant protein LA59_20300 PF13614 AAA domain LA59_20300 PF13807 G-rich domain on putative tyrosine kinase LA59_20310 PF08803 Putative mono-oxygenase ydhR LA59_20345 PF00375 Sodium:dicarboxylate symporter family LA59_20360 PF06803 Protein of unknown function (DUF1232) LA59_20365 PF01546 Peptidase family M20/M25/M40 LA59_20365 PF07687 Peptidase dimerisation domain LA59_20370 PF07670 Nucleoside recognition LA59_20375 PF07670 Nucleoside recognition LA59_20390 PF00128 Alpha amylase, catalytic domain LA59_20395 PF00912 Transglycosylase LA59_20400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA59_20400 PF00128 Alpha amylase, catalytic domain LA59_20400 PF02806 Alpha amylase, C-terminal all-beta domain LA59_20405 PF02446 4-alpha-glucanotransferase LA59_20410 PF00343 Carbohydrate phosphorylase LA59_20415 PF00196 Bacterial regulatory proteins, luxR family LA59_20415 PF17874 MalT-like TPR region LA59_20430 PF02630 SCO1/SenC LA59_20440 PF00367 phosphotransferase system, EIIB LA59_20440 PF02378 Phosphotransferase system, EIIC LA59_20445 PF03193 RsgA GTPase LA59_20450 PF00375 Sodium:dicarboxylate symporter family LA59_20455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_20455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA59_20470 PF01116 Fructose-bisphosphate aldolase class-II LA59_20480 PF00294 pfkB family carbohydrate kinase LA59_20485 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LA59_20485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_20490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LA59_20490 PF00205 Thiamine pyrophosphate enzyme, central domain LA59_20490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LA59_20495 PF01261 Xylose isomerase-like TIM barrel LA59_20500 PF00083 Sugar (and other) transporter LA59_20505 PF03466 LysR substrate binding domain LA59_20505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_20515 PF01261 Xylose isomerase-like TIM barrel LA59_20520 PF00108 Thiolase, N-terminal domain LA59_20520 PF02803 Thiolase, C-terminal domain LA59_20525 PF01144 Coenzyme A transferase LA59_20530 PF01144 Coenzyme A transferase LA59_20540 PF08543 Phosphomethylpyrimidine kinase LA59_20550 PF13520 Amino acid permease LA59_20555 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LA59_20555 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LA59_20555 PF01276 Orn/Lys/Arg decarboxylase, major domain LA59_20570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA59_20570 PF11852 Domain of unknown function (DUF3372) LA59_20570 PF17967 Pullulanase N2 domain LA59_20570 PF03714 Bacterial pullanase-associated domain LA59_20570 PF18494 Pullulanase Ins domain LA59_20575 PF02595 Glycerate kinase family LA59_20580 PF13556 PucR C-terminal helix-turn-helix domain LA59_20580 PF17853 GGDEF-like domain LA59_20580 PF05651 Putative sugar diacid recognition LA59_20585 PF01979 Amidohydrolase family LA59_20610 PF13419 Haloacid dehalogenase-like hydrolase LA59_20630 PF03466 LysR substrate binding domain LA59_20630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_20645 PF00005 ABC transporter LA59_20645 PF00664 ABC transporter transmembrane region LA59_20650 PF00664 ABC transporter transmembrane region LA59_20650 PF00005 ABC transporter LA59_20655 PF07715 TonB-dependent Receptor Plug Domain LA59_20655 PF00593 TonB dependent receptor LA59_20665 PF12833 Helix-turn-helix domain LA59_20670 PF03974 Ecotin LA59_20695 PF01204 Trehalase LA59_20705 PF12706 Beta-lactamase superfamily domain LA59_20715 PF07690 Major Facilitator Superfamily LA59_20720 PF13533 Biotin-lipoyl like LA59_20730 PF16868 NMT1-like family LA59_20735 PF03922 OmpW family LA59_20740 PF13599 Pentapeptide repeats (9 copies) LA59_20765 PF00893 Small Multidrug Resistance protein LA59_20775 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LA59_20775 PF18416 N-acetylglucosamine binding protein domain 2 LA59_20780 PF01037 Lrp/AsnC ligand binding domain LA59_20785 PF01810 LysE type translocator LA59_20790 PF00326 Prolyl oligopeptidase family LA59_20795 PF04954 Siderophore-interacting protein LA59_20795 PF08021 Siderophore-interacting FAD-binding domain LA59_20800 PF03466 LysR substrate binding domain LA59_20800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_20810 PF00797 N-acetyltransferase LA59_20815 PF08240 Alcohol dehydrogenase GroES-like domain LA59_20815 PF00107 Zinc-binding dehydrogenase LA59_20820 PF00756 Putative esterase LA59_20835 PF05656 Protein of unknown function (DUF805) LA59_20845 PF00990 Diguanylate cyclase, GGDEF domain LA59_20845 PF17152 Periplasmic sensor domain LA59_20865 PF00849 RNA pseudouridylate synthase LA59_20870 PF01554 MatE LA59_20875 PF00356 Bacterial regulatory proteins, lacI family LA59_20880 PF00005 ABC transporter LA59_20880 PF17912 MalK OB fold domain LA59_20885 PF00232 Glycosyl hydrolase family 1 LA59_20890 PF00528 Binding-protein-dependent transport system inner membrane component LA59_20895 PF00528 Binding-protein-dependent transport system inner membrane component LA59_20905 PF00356 Bacterial regulatory proteins, lacI family LA59_20910 PF02264 LamB porin LA59_20915 PF00990 Diguanylate cyclase, GGDEF domain LA59_20915 PF00563 EAL domain LA59_20925 PF06865 Pyrimidine/purine nucleoside phosphorylase LA59_20935 PF08329 Chitinase A, N-terminal domain LA59_20935 PF00704 Glycosyl hydrolases family 18 LA59_20960 PF03600 Citrate transporter LA59_20980 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LA59_21000 PF01116 Fructose-bisphosphate aldolase class-II LA59_21005 PF01979 Amidohydrolase family LA59_21010 PF03610 PTS system fructose IIA component LA59_21015 PF03613 PTS system mannose/fructose/sorbose family IID component LA59_21020 PF03609 PTS system sorbose-specific iic component LA59_21025 PF03830 PTS system sorbose subfamily IIB component LA59_21030 PF01380 SIS domain LA59_21035 PF08013 Tagatose 6 phosphate kinase LA59_21040 PF08220 DeoR-like helix-turn-helix domain LA59_21040 PF00455 DeoR C terminal sensor domain LA59_21045 PF08220 DeoR-like helix-turn-helix domain LA59_21045 PF00455 DeoR C terminal sensor domain LA59_21055 PF00005 ABC transporter LA59_21090 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LA59_21090 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LA59_21095 PF00730 HhH-GPD superfamily base excision DNA repair protein LA59_21095 PF06029 AlkA N-terminal domain LA59_21105 PF07681 DoxX LA59_21110 PF03466 LysR substrate binding domain LA59_21110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_21125 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LA59_21140 PF01261 Xylose isomerase-like TIM barrel LA59_21145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LA59_21155 PF00596 Class II Aldolase and Adducin N-terminal domain LA59_21160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_21165 PF03611 PTS system sugar-specific permease component LA59_21170 PF00455 DeoR C terminal sensor domain LA59_21170 PF08220 DeoR-like helix-turn-helix domain LA59_21210 PF03616 Sodium/glutamate symporter LA59_21215 PF00155 Aminotransferase class I and II LA59_21215 PF00392 Bacterial regulatory proteins, gntR family LA59_21220 PF00005 ABC transporter LA59_21235 PF03616 Sodium/glutamate symporter LA59_21240 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_21255 PF00672 HAMP domain LA59_21255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_21255 PF17200 Single Cache domain 2 LA59_21260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LA59_21270 PF00072 Response regulator receiver domain LA59_21270 PF04397 LytTr DNA-binding domain LA59_21275 PF07694 5TMR of 5TMR-LYT LA59_21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_21275 PF06580 Histidine kinase LA59_21275 PF13492 GAF domain LA59_21295 PF00005 ABC transporter LA59_21305 PF03466 LysR substrate binding domain LA59_21305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_21310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_21320 PF01098 Cell cycle protein LA59_21325 PF01709 Transcriptional regulator LA59_21335 PF17149 Periplasmic sensor domain found in signal transduction proteins LA59_21335 PF00672 HAMP domain LA59_21335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_21335 PF00512 His Kinase A (phospho-acceptor) domain LA59_21335 PF01627 Hpt domain LA59_21335 PF00072 Response regulator receiver domain LA59_21345 PF08719 Domain of unknown function (DUF1768) LA59_21345 PF00925 GTP cyclohydrolase II LA59_21360 PF00005 ABC transporter LA59_21360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_21365 PF00005 ABC transporter LA59_21365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_21380 PF18607 ParA helix turn helix domain LA59_21380 PF13614 AAA domain LA59_21385 PF02195 ParB-like nuclease domain LA59_21385 PF08775 ParB family LA59_21390 PF13718 GNAT acetyltransferase 2 LA59_21390 PF05127 Helicase LA59_21395 PF03544 Gram-negative bacterial TonB protein C-terminal LA59_21400 PF02472 Biopolymer transport protein ExbD/TolR LA59_21405 PF01618 MotA/TolQ/ExbB proton channel family LA59_21440 PF08281 Sigma-70, region 4 LA59_21440 PF04542 Sigma-70 region 2 LA59_21450 PF00132 Bacterial transferase hexapeptide (six repeats) LA59_21455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_21455 PF03466 LysR substrate binding domain LA59_21465 PF00246 Zinc carboxypeptidase LA59_21470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_21475 PF03358 NADPH-dependent FMN reductase LA59_21490 PF03412 Peptidase C39 family LA59_21490 PF00005 ABC transporter LA59_21490 PF00664 ABC transporter transmembrane region LA59_21505 PF00529 HlyD membrane-fusion protein of T1SS LA59_21510 PF02954 Bacterial regulatory protein, Fis family LA59_21510 PF00072 Response regulator receiver domain LA59_21510 PF00158 Sigma-54 interaction domain LA59_21515 PF00512 His Kinase A (phospho-acceptor) domain LA59_21515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_21515 PF02743 Cache domain LA59_21520 PF01243 Pyridoxamine 5'-phosphate oxidase LA59_21520 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LA59_21530 PF12833 Helix-turn-helix domain LA59_21535 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LA59_21535 PF01619 Proline dehydrogenase LA59_21535 PF14850 DNA-binding domain of Proline dehydrogenase LA59_21535 PF00171 Aldehyde dehydrogenase family LA59_21545 PF00474 Sodium:solute symporter family LA59_21585 PF01037 Lrp/AsnC ligand binding domain LA59_21595 PF00005 ABC transporter LA59_21595 PF00664 ABC transporter transmembrane region LA59_21610 PF00478 IMP dehydrogenase / GMP reductase domain LA59_21610 PF00571 CBS domain LA59_21625 PF02264 LamB porin LA59_21630 PF07470 Glycosyl Hydrolase Family 88 LA59_21635 PF00474 Sodium:solute symporter family LA59_21640 PF04962 KduI/IolB family LA59_21650 PF00294 pfkB family carbohydrate kinase LA59_21655 PF01081 KDPG and KHG aldolase LA59_21670 PF16347 Domain of unknown function (DUF4976) LA59_21670 PF00884 Sulfatase LA59_21675 PF02656 Domain of unknown function (DUF202) LA59_21695 PF00933 Glycosyl hydrolase family 3 N terminal domain LA59_21700 PF10688 Bacterial inner membrane protein LA59_21705 PF01081 KDPG and KHG aldolase LA59_21710 PF00294 pfkB family carbohydrate kinase LA59_21715 PF02614 Glucuronate isomerase LA59_21720 PF08125 Mannitol dehydrogenase C-terminal domain LA59_21720 PF01232 Mannitol dehydrogenase Rossmann domain LA59_21725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LA59_21730 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component LA59_21735 PF03480 Bacterial extracellular solute-binding protein, family 7 LA59_21740 PF07729 FCD domain LA59_21740 PF00392 Bacterial regulatory proteins, gntR family LA59_21745 PF03786 D-mannonate dehydratase (UxuA) LA59_21750 PF13443 Cro/C1-type HTH DNA-binding domain LA59_21765 PF00155 Aminotransferase class I and II LA59_21770 PF08281 Sigma-70, region 4 LA59_21770 PF04542 Sigma-70 region 2 LA59_21780 PF00271 Helicase conserved C-terminal domain LA59_21780 PF00270 DEAD/DEAH box helicase LA59_21785 PF06629 MltA-interacting protein MipA LA59_21795 PF13673 Acetyltransferase (GNAT) domain LA59_21800 PF03475 3-alpha domain LA59_21800 PF03473 MOSC domain LA59_21815 PF13404 AsnC-type helix-turn-helix domain LA59_21815 PF01037 Lrp/AsnC ligand binding domain LA59_21820 PF01810 LysE type translocator LA59_21830 PF00672 HAMP domain LA59_21830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_21830 PF02743 Cache domain LA59_21835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_21870 PF01547 Bacterial extracellular solute-binding protein LA59_21875 PF00128 Alpha amylase, catalytic domain LA59_21875 PF02903 Alpha amylase, N-terminal ig-like domain LA59_21875 PF16657 Maltogenic Amylase, C-terminal domain LA59_21880 PF00128 Alpha amylase, catalytic domain LA59_21880 PF16657 Maltogenic Amylase, C-terminal domain LA59_21885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_21885 PF03466 LysR substrate binding domain LA59_21910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_21910 PF13192 Thioredoxin domain LA59_21915 PF10417 C-terminal domain of 1-Cys peroxiredoxin LA59_21915 PF00578 AhpC/TSA family LA59_21920 PF01047 MarR family LA59_21925 PF02566 OsmC-like protein LA59_21940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_21940 PF00672 HAMP domain LA59_21940 PF17200 Single Cache domain 2 LA59_21945 PF05193 Peptidase M16 inactive domain LA59_21945 PF00675 Insulinase (Peptidase family M16) LA59_21970 PF04225 Opacity-associated protein A LysM-like domain LA59_21970 PF01551 Peptidase family M23 LA59_21980 PF13533 Biotin-lipoyl like LA59_21990 PF08360 QacR-like protein, C-terminal region LA59_21990 PF00440 Bacterial regulatory proteins, tetR family LA59_21995 PF00005 ABC transporter LA59_22000 PF01032 FecCD transport family LA59_22005 PF01032 FecCD transport family LA59_22010 PF01497 Periplasmic binding protein LA59_22015 PF03466 LysR substrate binding domain LA59_22015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_22020 PF00593 TonB dependent receptor LA59_22020 PF07715 TonB-dependent Receptor Plug Domain LA59_22025 PF00892 EamA-like transporter family LA59_22040 PF07690 Major Facilitator Superfamily LA59_22060 PF13187 4Fe-4S dicluster domain LA59_22060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA59_22060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA59_22065 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LA59_22065 PF00175 Oxidoreductase NAD-binding domain LA59_22070 PF17179 4Fe-4S dicluster domain LA59_22075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_22075 PF14824 Sirohaem biosynthesis protein central LA59_22075 PF10414 Sirohaem synthase dimerisation region LA59_22080 PF00990 Diguanylate cyclase, GGDEF domain LA59_22085 PF00128 Alpha amylase, catalytic domain LA59_22085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LA59_22090 PF02264 LamB porin LA59_22105 PF00128 Alpha amylase, catalytic domain LA59_22105 PF02903 Alpha amylase, N-terminal ig-like domain LA59_22110 PF04231 Endonuclease I LA59_22115 PF00392 Bacterial regulatory proteins, gntR family LA59_22115 PF00155 Aminotransferase class I and II LA59_22160 PF00583 Acetyltransferase (GNAT) family LA59_22195 PF03264 NapC/NirT cytochrome c family, N-terminal region LA59_22200 PF18364 Molybdopterin oxidoreductase N-terminal domain LA59_22200 PF00384 Molybdopterin oxidoreductase LA59_22200 PF01568 Molydopterin dinucleotide binding domain LA59_22205 PF01569 PAP2 superfamily LA59_22210 PF02581 Thiamine monophosphate synthase LA59_22215 PF02110 Hydroxyethylthiazole kinase family LA59_22220 PF03070 TENA/THI-4/PQQC family LA59_22225 PF09084 NMT1/THI5 like LA59_22230 PF00528 Binding-protein-dependent transport system inner membrane component LA59_22235 PF00005 ABC transporter LA59_22240 PF08543 Phosphomethylpyrimidine kinase LA59_22245 PF01523 Putative modulator of DNA gyrase LA59_22250 PF01523 Putative modulator of DNA gyrase LA59_22255 PF04013 Putative SAM-dependent RNA methyltransferase LA59_22305 PF10928 Protein of unknown function (DUF2810) LA59_22310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LA59_22310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LA59_22320 PF03009 Glycerophosphoryl diester phosphodiesterase family LA59_22330 PF00486 Transcriptional regulatory protein, C terminal LA59_22330 PF00072 Response regulator receiver domain LA59_22335 PF16750 Sensor domain of 2-component histidine kinase LA59_22335 PF00512 His Kinase A (phospho-acceptor) domain LA59_22335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_22335 PF00672 HAMP domain LA59_22340 PF00593 TonB dependent receptor LA59_22340 PF07715 TonB-dependent Receptor Plug Domain LA59_22350 PF01618 MotA/TolQ/ExbB proton channel family LA59_22355 PF01618 MotA/TolQ/ExbB proton channel family LA59_22360 PF02472 Biopolymer transport protein ExbD/TolR LA59_22405 PF01297 Zinc-uptake complex component A periplasmic LA59_22410 PF00005 ABC transporter LA59_22415 PF00950 ABC 3 transport family LA59_22430 PF00326 Prolyl oligopeptidase family LA59_22430 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LA59_22435 PF07690 Major Facilitator Superfamily LA59_22440 PF00491 Arginase family LA59_22445 PF17810 Arginine decarboxylase helical bundle domain LA59_22445 PF17944 Arginine decarboxylase C-terminal helical extension LA59_22445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA59_22450 PF00753 Metallo-beta-lactamase superfamily LA59_22455 PF08443 RimK-like ATP-grasp domain LA59_22455 PF18030 RimK PreATP-grasp domain LA59_22460 PF18030 RimK PreATP-grasp domain LA59_22460 PF08443 RimK-like ATP-grasp domain LA59_22475 PF12706 Beta-lactamase superfamily domain LA59_22485 PF03466 LysR substrate binding domain LA59_22485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_22510 PF00232 Glycosyl hydrolase family 1 LA59_22515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_22515 PF02743 Cache domain LA59_22515 PF00512 His Kinase A (phospho-acceptor) domain LA59_22520 PF02954 Bacterial regulatory protein, Fis family LA59_22520 PF00158 Sigma-54 interaction domain LA59_22520 PF00072 Response regulator receiver domain LA59_22525 PF05525 Branched-chain amino acid transport protein LA59_22545 PF01266 FAD dependent oxidoreductase LA59_22555 PF03116 NQR2, RnfD, RnfE family LA59_22560 PF01212 Beta-eliminating lyase LA59_22575 PF07670 Nucleoside recognition LA59_22575 PF01773 Na+ dependent nucleoside transporter N-terminus LA59_22575 PF07662 Na+ dependent nucleoside transporter C-terminus LA59_22580 PF00483 Nucleotidyl transferase LA59_22600 PF05230 MASE2 domain LA59_22600 PF00990 Diguanylate cyclase, GGDEF domain LA59_22615 PF00990 Diguanylate cyclase, GGDEF domain LA59_22620 PF00875 DNA photolyase LA59_22620 PF03441 FAD binding domain of DNA photolyase LA59_22625 PF04244 Deoxyribodipyrimidine photo-lyase-related protein LA59_22635 PF01641 SelR domain LA59_22635 PF01625 Peptide methionine sulfoxide reductase LA59_22640 PF02566 OsmC-like protein LA59_22645 PF14602 Hexapeptide repeat of succinyl-transferase LA59_22645 PF12464 Maltose acetyltransferase LA59_22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_22685 PF03466 LysR substrate binding domain LA59_22690 PF13419 Haloacid dehalogenase-like hydrolase LA59_22725 PF00657 GDSL-like Lipase/Acylhydrolase LA59_22740 PF03611 PTS system sugar-specific permease component LA59_22750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_22755 PF00356 Bacterial regulatory proteins, lacI family LA59_22760 PF13419 Haloacid dehalogenase-like hydrolase LA59_22770 PF00266 Aminotransferase class-V LA59_22780 PF00005 ABC transporter LA59_22785 PF00528 Binding-protein-dependent transport system inner membrane component LA59_22790 PF00392 Bacterial regulatory proteins, gntR family LA59_22790 PF07702 UTRA domain LA59_22805 PF04393 Protein of unknown function (DUF535) LA59_22815 PF01266 FAD dependent oxidoreductase LA59_22820 PF00246 Zinc carboxypeptidase LA59_22820 PF18027 Cytosolic carboxypeptidase N-terminal domain LA59_22825 PF00691 OmpA family LA59_22825 PF01389 OmpA-like transmembrane domain LA59_22830 PF03466 LysR substrate binding domain LA59_22830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_22840 PF03466 LysR substrate binding domain LA59_22840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_22850 PF01566 Natural resistance-associated macrophage protein LA59_22855 PF00854 POT family LA59_22860 PF03315 Serine dehydratase beta chain LA59_22860 PF03313 Serine dehydratase alpha chain LA59_22885 PF01464 Transglycosylase SLT domain LA59_22885 PF01476 LysM domain LA59_22905 PF00460 Flagella basal body rod protein LA59_22910 PF00460 Flagella basal body rod protein LA59_22910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_22915 PF13861 FlgD Tudor-like domain LA59_22915 PF13860 FlgD Ig-like domain LA59_22915 PF03963 Flagellar hook capping protein - N-terminal region LA59_22920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_22920 PF00460 Flagella basal body rod protein LA59_22920 PF07559 Flagellar basal body protein FlaE LA59_22925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_22925 PF00460 Flagella basal body rod protein LA59_22930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_22930 PF00460 Flagella basal body rod protein LA59_22935 PF02107 Flagellar L-ring protein LA59_22940 PF02119 Flagellar P-ring protein LA59_22945 PF10135 Rod binding protein LA59_22945 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LA59_22950 PF00460 Flagella basal body rod protein LA59_22950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LA59_22955 PF00669 Bacterial flagellin N-terminal helical region LA59_22975 PF01070 FMN-dependent dehydrogenase LA59_22990 PF08241 Methyltransferase domain LA59_23010 PF03239 Iron permease FTR1 family LA59_23015 PF10634 Fe2+ transport protein LA59_23035 PF00005 ABC transporter LA59_23040 PF00578 AhpC/TSA family LA59_23050 PF04205 FMN-binding domain LA59_23060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_23070 PF08000 Bacterial PH domain LA59_23095 PF13677 Membrane MotB of proton-channel complex MotA/MotB LA59_23095 PF00691 OmpA family LA59_23100 PF01618 MotA/TolQ/ExbB proton channel family LA59_23105 PF04545 Sigma-70, region 4 LA59_23105 PF04542 Sigma-70 region 2 LA59_23110 PF03748 Flagellar basal body-associated protein FliL LA59_23125 PF02561 Flagellar protein FliS LA59_23130 PF07195 Flagellar hook-associated protein 2 C-terminus LA59_23130 PF02465 Flagellar hook-associated protein 2 N-terminus LA59_23130 PF07196 Flagellin hook IN motif LA59_23140 PF00669 Bacterial flagellin N-terminal helical region LA59_23140 PF00700 Bacterial flagellin C-terminal helical region LA59_23150 PF00771 FHIPEP family LA59_23160 PF01311 Bacterial export proteins, family 1 LA59_23165 PF01313 Bacterial export proteins, family 3 LA59_23170 PF00813 FliP family LA59_23175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LA59_23190 PF02954 Bacterial regulatory protein, Fis family LA59_23190 PF00072 Response regulator receiver domain LA59_23190 PF00158 Sigma-54 interaction domain LA59_23195 PF02049 Flagellar hook-basal body complex protein FliE LA59_23200 PF08345 Flagellar M-ring protein C-terminal LA59_23200 PF01514 Secretory protein of YscJ/FliF family LA59_23205 PF01706 FliG C-terminal domain LA59_23205 PF14841 FliG middle domain LA59_23205 PF14842 FliG N-terminal domain LA59_23215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_23215 PF18269 T3SS EscN ATPase C-terminal domain LA59_23225 PF00563 EAL domain LA59_23225 PF05231 MASE1 LA59_23235 PF03466 LysR substrate binding domain LA59_23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23245 PF00419 Fimbrial protein LA59_23250 PF02753 Pili assembly chaperone PapD, C-terminal domain LA59_23250 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LA59_23255 PF00577 Outer membrane usher protein LA59_23255 PF13954 PapC N-terminal domain LA59_23255 PF13953 PapC C-terminal domain LA59_23305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LA59_23310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23310 PF03466 LysR substrate binding domain LA59_23330 PF00486 Transcriptional regulatory protein, C terminal LA59_23330 PF00072 Response regulator receiver domain LA59_23335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_23335 PF08448 PAS fold LA59_23335 PF13426 PAS domain LA59_23335 PF00072 Response regulator receiver domain LA59_23335 PF00512 His Kinase A (phospho-acceptor) domain LA59_23340 PF00266 Aminotransferase class-V LA59_23345 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_23350 PF03707 Bacterial signalling protein N terminal repeat LA59_23350 PF00563 EAL domain LA59_23350 PF00990 Diguanylate cyclase, GGDEF domain LA59_23355 PF00155 Aminotransferase class I and II LA59_23360 PF00107 Zinc-binding dehydrogenase LA59_23360 PF08240 Alcohol dehydrogenase GroES-like domain LA59_23395 PF01638 HxlR-like helix-turn-helix LA59_23405 PF00194 Eukaryotic-type carbonic anhydrase LA59_23410 PF00376 MerR family regulatory protein LA59_23410 PF09278 MerR, DNA binding LA59_23440 PF13091 PLD-like domain LA59_23445 PF13533 Biotin-lipoyl like LA59_23450 PF00873 AcrB/AcrD/AcrF family LA59_23460 PF00873 AcrB/AcrD/AcrF family LA59_23490 PF08218 Citrate lyase ligase C-terminal domain LA59_23500 PF13193 AMP-binding enzyme C-terminal domain LA59_23500 PF00501 AMP-binding enzyme LA59_23505 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_23510 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 LA59_23510 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LA59_23510 PF00703 Glycosyl hydrolases family 2 LA59_23510 PF02837 Glycosyl hydrolases family 2, sugar binding domain LA59_23515 PF00196 Bacterial regulatory proteins, luxR family LA59_23525 PF03707 Bacterial signalling protein N terminal repeat LA59_23525 PF00990 Diguanylate cyclase, GGDEF domain LA59_23525 PF00563 EAL domain LA59_23535 PF03616 Sodium/glutamate symporter LA59_23540 PF02600 Disulfide bond formation protein DsbB LA59_23550 PF02321 Outer membrane efflux protein LA59_23555 PF00873 AcrB/AcrD/AcrF family LA59_23560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_23565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23565 PF03466 LysR substrate binding domain LA59_23580 PF00579 tRNA synthetases class I (W and Y) LA59_23585 PF00072 Response regulator receiver domain LA59_23585 PF00196 Bacterial regulatory proteins, luxR family LA59_23595 PF00391 PEP-utilising enzyme, mobile domain LA59_23595 PF02896 PEP-utilising enzyme, TIM barrel domain LA59_23595 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LA59_23600 PF03618 Kinase/pyrophosphorylase LA59_23605 PF17763 Glutaminase/Asparaginase C-terminal domain LA59_23605 PF00710 Asparaginase, N-terminal LA59_23610 PF00563 EAL domain LA59_23610 PF13185 GAF domain LA59_23610 PF00990 Diguanylate cyclase, GGDEF domain LA59_23620 PF03466 LysR substrate binding domain LA59_23620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23645 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) LA59_23660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA59_23670 PF07690 Major Facilitator Superfamily LA59_23680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23680 PF03466 LysR substrate binding domain LA59_23700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23700 PF03466 LysR substrate binding domain LA59_23710 PF00271 Helicase conserved C-terminal domain LA59_23710 PF00270 DEAD/DEAH box helicase LA59_23720 PF00535 Glycosyl transferase family 2 LA59_23730 PF03099 Biotin/lipoate A/B protein ligase family LA59_23750 PF00155 Aminotransferase class I and II LA59_23755 PF12833 Helix-turn-helix domain LA59_23755 PF01497 Periplasmic binding protein LA59_23760 PF03466 LysR substrate binding domain LA59_23760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23770 PF13419 Haloacid dehalogenase-like hydrolase LA59_23775 PF00158 Sigma-54 interaction domain LA59_23775 PF01590 GAF domain LA59_23780 PF00258 Flavodoxin LA59_23780 PF00301 Rubredoxin LA59_23780 PF00753 Metallo-beta-lactamase superfamily LA59_23785 PF18113 Rubredoxin binding C-terminal domain LA59_23785 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_23795 PF13006 Insertion element 4 transposase N-terminal LA59_23795 PF01609 Transposase DDE domain LA59_23805 PF11742 Protein of unknown function (DUF3302) LA59_23810 PF00529 HlyD membrane-fusion protein of T1SS LA59_23810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_23815 PF03466 LysR substrate binding domain LA59_23815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23825 PF01238 Phosphomannose isomerase type I LA59_23830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_23830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_23835 PF12833 Helix-turn-helix domain LA59_23845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_23855 PF03466 LysR substrate binding domain LA59_23855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_23865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA59_23865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA59_23870 PF00199 Catalase LA59_23870 PF06628 Catalase-related immune-responsive LA59_23880 PF16884 N-terminal domain of oxidoreductase LA59_23880 PF00107 Zinc-binding dehydrogenase LA59_23885 PF00440 Bacterial regulatory proteins, tetR family LA59_23885 PF16925 Tetracyclin repressor-like, C-terminal domain LA59_23920 PF00534 Glycosyl transferases group 1 LA59_23920 PF13439 Glycosyltransferase Family 4 LA59_23930 PF02706 Chain length determinant protein LA59_23930 PF13807 G-rich domain on putative tyrosine kinase LA59_23930 PF13614 AAA domain LA59_23945 PF02397 Bacterial sugar transferase LA59_23950 PF08402 TOBE domain LA59_23950 PF00005 ABC transporter LA59_23955 PF01547 Bacterial extracellular solute-binding protein LA59_23960 PF00528 Binding-protein-dependent transport system inner membrane component LA59_23960 PF14785 Maltose transport system permease protein MalF P2 domain LA59_23965 PF00528 Binding-protein-dependent transport system inner membrane component LA59_24010 PF01464 Transglycosylase SLT domain LA59_24010 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LA59_24035 PF05661 Protein of unknown function (DUF808) LA59_24040 PF01979 Amidohydrolase family LA59_24045 PF01679 Proteolipid membrane potential modulator LA59_24050 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_24050 PF03476 MOSC N-terminal beta barrel domain LA59_24050 PF03473 MOSC domain LA59_24050 PF00111 2Fe-2S iron-sulfur cluster binding domain LA59_24050 PF03476 MOSC N-terminal beta barrel domain LA59_24050 PF03473 MOSC domain LA59_24055 PF02540 NAD synthase LA59_24060 PF01467 Cytidylyltransferase-like LA59_24100 PF03466 LysR substrate binding domain LA59_24100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_24120 PF07690 Major Facilitator Superfamily LA59_24125 PF00857 Isochorismatase family LA59_24130 PF01965 DJ-1/PfpI family LA59_24130 PF12833 Helix-turn-helix domain LA59_24135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_24140 PF00884 Sulfatase LA59_24140 PF08019 Phosphoethanolamine transferase EptA/EptB LA59_24145 PF01219 Prokaryotic diacylglycerol kinase LA59_24155 PF00672 HAMP domain LA59_24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_24155 PF00512 His Kinase A (phospho-acceptor) domain LA59_24160 PF00486 Transcriptional regulatory protein, C terminal LA59_24160 PF00072 Response regulator receiver domain LA59_24165 PF02028 BCCT, betaine/carnitine/choline family transporter LA59_24170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LA59_24170 PF13378 Enolase C-terminal domain-like LA59_24175 PF04205 FMN-binding domain LA59_24175 PF00890 FAD binding domain LA59_24180 PF00392 Bacterial regulatory proteins, gntR family LA59_24180 PF07729 FCD domain LA59_24185 PF00114 Pilin (bacterial filament) LA59_24185 PF07963 Prokaryotic N-terminal methylation motif LA59_24190 PF00106 short chain dehydrogenase LA59_24205 PF01323 DSBA-like thioredoxin domain LA59_24220 PF00255 Glutathione peroxidase LA59_24225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LA59_24235 PF07690 Major Facilitator Superfamily LA59_24250 PF01966 HD domain LA59_24265 PF07969 Amidohydrolase family LA59_24270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin LA59_24275 PF00571 CBS domain LA59_24275 PF01769 Divalent cation transporter LA59_24275 PF03448 MgtE intracellular N domain LA59_24280 PF03109 ABC1 family LA59_24285 PF00529 HlyD membrane-fusion protein of T1SS LA59_24285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_24310 PF00486 Transcriptional regulatory protein, C terminal LA59_24310 PF00072 Response regulator receiver domain LA59_24315 PF00672 HAMP domain LA59_24315 PF16527 Two-component sensor protein CpxA, periplasmic domain LA59_24315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_24315 PF00512 His Kinase A (phospho-acceptor) domain LA59_24325 PF00155 Aminotransferase class I and II LA59_24325 PF00392 Bacterial regulatory proteins, gntR family LA59_24330 PF13520 Amino acid permease LA59_24335 PF13404 AsnC-type helix-turn-helix domain LA59_24335 PF01037 Lrp/AsnC ligand binding domain LA59_24345 PF03466 LysR substrate binding domain LA59_24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_24360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LA59_24360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LA59_24365 PF01627 Hpt domain LA59_24365 PF00072 Response regulator receiver domain LA59_24365 PF00512 His Kinase A (phospho-acceptor) domain LA59_24365 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LA59_24365 PF00672 HAMP domain LA59_24365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_24370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LA59_24375 PF01554 MatE LA59_24380 PF04363 Protein of unknown function (DUF496) LA59_24390 PF04337 Protein of unknown function, DUF480 LA59_24395 PF01541 GIY-YIG catalytic domain LA59_24400 PF13407 Periplasmic binding protein domain LA59_24405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_24405 PF09308 LuxQ, periplasmic LA59_24405 PF00512 His Kinase A (phospho-acceptor) domain LA59_24405 PF00072 Response regulator receiver domain LA59_24420 PF01037 Lrp/AsnC ligand binding domain LA59_24445 PF13721 SecD export protein N-terminal TM region LA59_24445 PF07549 SecD/SecF GG Motif LA59_24445 PF02355 Protein export membrane protein LA59_24450 PF07549 SecD/SecF GG Motif LA59_24450 PF02355 Protein export membrane protein LA59_24460 PF01810 LysE type translocator LA59_24465 PF00106 short chain dehydrogenase LA59_24470 PF02803 Thiolase, C-terminal domain LA59_24470 PF00108 Thiolase, N-terminal domain LA59_24480 PF00561 alpha/beta hydrolase fold LA59_24480 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus LA59_24490 PF03264 NapC/NirT cytochrome c family, N-terminal region LA59_24495 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) LA59_24500 PF01568 Molydopterin dinucleotide binding domain LA59_24500 PF00384 Molybdopterin oxidoreductase LA59_24500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LA59_24510 PF13187 4Fe-4S dicluster domain LA59_24510 PF12838 4Fe-4S dicluster domain LA59_24515 PF00672 HAMP domain LA59_24515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_24515 PF07730 Histidine kinase LA59_24515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LA59_24520 PF00196 Bacterial regulatory proteins, luxR family LA59_24520 PF00072 Response regulator receiver domain LA59_24535 PF01546 Peptidase family M20/M25/M40 LA59_24535 PF07687 Peptidase dimerisation domain LA59_24540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_24545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_24550 PF00873 AcrB/AcrD/AcrF family LA59_24555 PF12729 Four helix bundle sensory module for signal transduction LA59_24555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_24555 PF00672 HAMP domain LA59_24560 PF00472 RF-1 domain LA59_24565 PF13419 Haloacid dehalogenase-like hydrolase LA59_24570 PF00196 Bacterial regulatory proteins, luxR family LA59_24570 PF00072 Response regulator receiver domain LA59_24595 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LA59_24595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LA59_24605 PF00691 OmpA family LA59_24605 PF13488 Glycine zipper LA59_24635 PF05656 Protein of unknown function (DUF805) LA59_24685 PF06271 RDD family LA59_24720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_24725 PF00528 Binding-protein-dependent transport system inner membrane component LA59_24730 PF12911 N-terminal TM domain of oligopeptide transport permease C LA59_24730 PF00528 Binding-protein-dependent transport system inner membrane component LA59_24735 PF00005 ABC transporter LA59_24735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_24740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LA59_24740 PF00005 ABC transporter LA59_24755 PF00313 'Cold-shock' DNA-binding domain LA59_24760 PF03889 Alternative ribosome-rescue factor A LA59_24770 PF00990 Diguanylate cyclase, GGDEF domain LA59_24785 PF00005 ABC transporter LA59_24785 PF02687 FtsX-like permease family LA59_24785 PF12704 MacB-like periplasmic core domain LA59_24790 PF02687 FtsX-like permease family LA59_24790 PF12704 MacB-like periplasmic core domain LA59_24790 PF00005 ABC transporter LA59_24800 PF04545 Sigma-70, region 4 LA59_24800 PF00140 Sigma-70 factor, region 1.2 LA59_24800 PF04539 Sigma-70 region 3 LA59_24800 PF04542 Sigma-70 region 2 LA59_24810 PF00005 ABC transporter LA59_24815 PF00664 ABC transporter transmembrane region LA59_24815 PF00005 ABC transporter LA59_24820 PF02321 Outer membrane efflux protein LA59_24825 PF00072 Response regulator receiver domain LA59_24825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_24830 PF13533 Biotin-lipoyl like LA59_24850 PF00672 HAMP domain LA59_24850 PF17200 Single Cache domain 2 LA59_24850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_24855 PF00210 Ferritin-like domain LA59_24865 PF02016 LD-carboxypeptidase N-terminal domain LA59_24865 PF17676 LD-carboxypeptidase C-terminal domain LA59_24870 PF07995 Glucose / Sorbosone dehydrogenase LA59_24875 PF00465 Iron-containing alcohol dehydrogenase LA59_24890 PF00892 EamA-like transporter family LA59_24900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_24900 PF03466 LysR substrate binding domain LA59_24910 PF00501 AMP-binding enzyme LA59_24910 PF13193 AMP-binding enzyme C-terminal domain LA59_24920 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LA59_24925 PF01329 Pterin 4 alpha carbinolamine dehydratase LA59_24950 PF12843 Putative quorum-sensing-regulated virulence factor LA59_24985 PF12805 FUSC-like inner membrane protein yccS LA59_24990 PF12462 DNA helicase IV / RNA helicase N terminal LA59_24990 PF00580 UvrD/REP helicase N-terminal domain LA59_24990 PF13361 UvrD-like helicase C-terminal domain LA59_24995 PF02142 MGS-like domain LA59_25000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_25005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_25005 PF00672 HAMP domain LA59_25005 PF00512 His Kinase A (phospho-acceptor) domain LA59_25005 PF00072 Response regulator receiver domain LA59_25005 PF01627 Hpt domain LA59_25025 PF00672 HAMP domain LA59_25025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_25025 PF00512 His Kinase A (phospho-acceptor) domain LA59_25025 PF16750 Sensor domain of 2-component histidine kinase LA59_25030 PF00486 Transcriptional regulatory protein, C terminal LA59_25030 PF00072 Response regulator receiver domain LA59_25035 PF00884 Sulfatase LA59_25040 PF00884 Sulfatase LA59_25050 PF07726 ATPase family associated with various cellular activities (AAA) LA59_25050 PF17863 AAA lid domain LA59_25065 PF00092 von Willebrand factor type A domain LA59_25085 PF00119 ATP synthase A chain LA59_25090 PF00137 ATP synthase subunit C LA59_25095 PF00430 ATP synthase B/B' CF(0) LA59_25100 PF00213 ATP synthase delta (OSCP) subunit LA59_25105 PF00306 ATP synthase alpha/beta chain, C terminal domain LA59_25105 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_25105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_25110 PF00231 ATP synthase LA59_25115 PF02874 ATP synthase alpha/beta family, beta-barrel domain LA59_25115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LA59_25120 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LA59_25120 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LA59_25125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LA59_25125 PF01872 RibD C-terminal domain LA59_25130 PF03466 LysR substrate binding domain LA59_25130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_25135 PF00781 Diacylglycerol kinase catalytic domain LA59_25140 PF04076 Bacterial OB fold (BOF) protein LA59_25155 PF03781 Sulfatase-modifying factor enzyme 1 LA59_25160 PF13186 Iron-sulfur cluster-binding domain LA59_25160 PF04055 Radical SAM superfamily LA59_25170 PF08774 VRR-NUC domain LA59_25170 PF18081 Fanconi anemia-associated nuclease SAP domain LA59_25185 PF01435 Peptidase family M48 LA59_25190 PF04011 LemA family LA59_25195 PF03606 C4-dicarboxylate anaerobic carrier LA59_25215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_25215 PF00072 Response regulator receiver domain LA59_25220 PF00155 Aminotransferase class I and II LA59_25225 PF01926 50S ribosome-binding GTPase LA59_25230 PF01476 LysM domain LA59_25230 PF01551 Peptidase family M23 LA59_25230 PF08525 Opacity-associated protein A N-terminal motif LA59_25255 PF00158 Sigma-54 interaction domain LA59_25255 PF02954 Bacterial regulatory protein, Fis family LA59_25260 PF00004 ATPase family associated with various cellular activities (AAA) LA59_25260 PF07724 AAA domain (Cdc48 subfamily) LA59_25260 PF17871 AAA lid domain LA59_25260 PF10431 C-terminal, D2-small domain, of ClpB protein LA59_25265 PF05638 Type VI secretion system effector, Hcp LA59_25270 PF04717 Type VI secretion system, phage-baseplate injector LA59_25295 PF00069 Protein kinase domain LA59_25330 PF01037 Lrp/AsnC ligand binding domain LA59_25390 PF13181 Tetratricopeptide repeat LA59_25390 PF17128 Domain of unknown function (DUF5107) LA59_25395 PF00083 Sugar (and other) transporter LA59_25400 PF00480 ROK family LA59_25405 PF01263 Aldose 1-epimerase LA59_25410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LA59_25410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LA59_25415 PF04183 IucA / IucC family LA59_25415 PF06276 Ferric iron reductase FhuF-like transporter LA59_25430 PF00206 Lyase LA59_25430 PF02655 ATP-grasp domain LA59_25435 PF07715 TonB-dependent Receptor Plug Domain LA59_25435 PF00593 TonB dependent receptor LA59_25440 PF00593 TonB dependent receptor LA59_25440 PF07660 Secretin and TonB N terminus short domain LA59_25440 PF07715 TonB-dependent Receptor Plug Domain LA59_25445 PF01497 Periplasmic binding protein LA59_25450 PF01032 FecCD transport family LA59_25455 PF01032 FecCD transport family LA59_25460 PF00005 ABC transporter LA59_25465 PF07715 TonB-dependent Receptor Plug Domain LA59_25465 PF00593 TonB dependent receptor LA59_25475 PF00990 Diguanylate cyclase, GGDEF domain LA59_25475 PF03707 Bacterial signalling protein N terminal repeat LA59_25475 PF00563 EAL domain LA59_25480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_25480 PF00512 His Kinase A (phospho-acceptor) domain LA59_25480 PF00072 Response regulator receiver domain LA59_25480 PF09456 RcsC Alpha-Beta-Loop (ABL) LA59_25485 PF00990 Diguanylate cyclase, GGDEF domain LA59_25485 PF13188 PAS domain LA59_25485 PF00563 EAL domain LA59_25485 PF03707 Bacterial signalling protein N terminal repeat LA59_25490 PF00196 Bacterial regulatory proteins, luxR family LA59_25490 PF00072 Response regulator receiver domain LA59_25495 PF00990 Diguanylate cyclase, GGDEF domain LA59_25500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_25500 PF03466 LysR substrate binding domain LA59_25505 PF00072 Response regulator receiver domain LA59_25505 PF00196 Bacterial regulatory proteins, luxR family LA59_25510 PF00672 HAMP domain LA59_25510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_25515 PF00881 Nitroreductase family LA59_25525 PF00072 Response regulator receiver domain LA59_25525 PF01584 CheW-like domain LA59_25530 PF08334 Type II secretion system (T2SS), protein G LA59_25530 PF07963 Prokaryotic N-terminal methylation motif LA59_25540 PF00892 EamA-like transporter family LA59_25555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LA59_25555 PF00034 Cytochrome c LA59_25565 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA59_25570 PF00034 Cytochrome c LA59_25585 PF00682 HMGL-like LA59_25590 PF00378 Enoyl-CoA hydratase/isomerase LA59_25595 PF01039 Carboxyl transferase domain LA59_25600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LA59_25600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LA59_25600 PF02770 Acyl-CoA dehydrogenase, middle domain LA59_25605 PF09278 MerR, DNA binding LA59_25605 PF00376 MerR family regulatory protein LA59_25610 PF00108 Thiolase, N-terminal domain LA59_25610 PF02803 Thiolase, C-terminal domain LA59_25615 PF00171 Aldehyde dehydrogenase family LA59_25625 PF00378 Enoyl-CoA hydratase/isomerase LA59_25630 PF00378 Enoyl-CoA hydratase/isomerase LA59_25635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LA59_25635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LA59_25650 PF06481 COX Aromatic Rich Motif LA59_25650 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LA59_25655 PF00115 Cytochrome C and Quinol oxidase polypeptide I LA59_25660 PF00510 Cytochrome c oxidase subunit III LA59_25665 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LA59_25670 PF01040 UbiA prenyltransferase family LA59_25675 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_25675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LA59_25680 PF01569 PAP2 superfamily LA59_25690 PF00893 Small Multidrug Resistance protein LA59_25695 PF00892 EamA-like transporter family LA59_25715 PF00171 Aldehyde dehydrogenase family LA59_25720 PF00005 ABC transporter LA59_25720 PF00664 ABC transporter transmembrane region LA59_25735 PF01638 HxlR-like helix-turn-helix LA59_25745 PF11490 DNA polymerase III polC-type N-terminus II LA59_25745 PF02811 PHP domain LA59_25745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LA59_25745 PF07733 Bacterial DNA polymerase III alpha NTPase domain LA59_25745 PF00929 Exonuclease LA59_25745 PF14579 Helix-hairpin-helix motif LA59_25820 PF02347 Glycine cleavage system P-protein LA59_25825 PF01597 Glycine cleavage H-protein LA59_25830 PF00464 Serine hydroxymethyltransferase LA59_25840 PF08669 Glycine cleavage T-protein C-terminal barrel domain LA59_25840 PF01571 Aminomethyltransferase folate-binding domain LA59_25850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_25855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_25860 PF00873 AcrB/AcrD/AcrF family LA59_25885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LA59_25885 PF02378 Phosphotransferase system, EIIC LA59_25890 PF00294 pfkB family carbohydrate kinase LA59_25895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LA59_25895 PF00381 PTS HPr component phosphorylation site LA59_25900 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LA59_25900 PF00356 Bacterial regulatory proteins, lacI family LA59_25915 PF01590 GAF domain LA59_25915 PF00990 Diguanylate cyclase, GGDEF domain LA59_25915 PF00563 EAL domain LA59_25915 PF00989 PAS fold LA59_25920 PF00528 Binding-protein-dependent transport system inner membrane component LA59_25925 PF00497 Bacterial extracellular solute-binding proteins, family 3 LA59_25930 PF00528 Binding-protein-dependent transport system inner membrane component LA59_25935 PF00005 ABC transporter LA59_25945 PF00465 Iron-containing alcohol dehydrogenase LA59_25950 PF06719 AraC-type transcriptional regulator N-terminus LA59_25950 PF12833 Helix-turn-helix domain LA59_25955 PF06483 Chitinase C LA59_25955 PF00704 Glycosyl hydrolases family 18 LA59_25960 PF00483 Nucleotidyl transferase LA59_25965 PF01268 Formate--tetrahydrofolate ligase LA59_25970 PF00294 pfkB family carbohydrate kinase LA59_25985 PF11849 Domain of unknown function (DUF3369) LA59_25990 PF13419 Haloacid dehalogenase-like hydrolase LA59_25995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LA59_25995 PF00672 HAMP domain LA59_26000 PF04336 Acyl carrier protein phosphodiesterase LA59_26005 PF00271 Helicase conserved C-terminal domain LA59_26005 PF00270 DEAD/DEAH box helicase LA59_26010 PF12792 CSS motif domain associated with EAL LA59_26010 PF00563 EAL domain LA59_26025 PF01292 Prokaryotic cytochrome b561 LA59_26030 PF04264 YceI-like domain LA59_26035 PF01226 Formate/nitrite transporter LA59_26045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_26045 PF03466 LysR substrate binding domain LA59_26050 PF06496 Protein of unknown function (DUF1097) LA59_26055 PF11398 Protein of unknown function (DUF2813) LA59_26060 PF02872 5'-nucleotidase, C-terminal domain LA59_26060 PF00149 Calcineurin-like phosphoesterase LA59_26070 PF03741 Integral membrane protein TerC family LA59_26085 PF00809 Pterin binding enzyme LA59_26085 PF02965 Vitamin B12 dependent methionine synthase, activation domain LA59_26085 PF02607 B12 binding domain LA59_26085 PF02310 B12 binding domain LA59_26085 PF02574 Homocysteine S-methyltransferase LA59_26100 PF12262 Bacterial virulence factor lipase N-terminal LA59_26105 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LA59_26120 PF03061 Thioesterase superfamily LA59_26130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LA59_26130 PF12793 Sugar transport-related sRNA regulator N-term LA59_26155 PF00684 DnaJ central domain LA59_26155 PF00226 DnaJ domain LA59_26155 PF01556 DnaJ C terminal domain LA59_26165 PF03707 Bacterial signalling protein N terminal repeat LA59_26165 PF13188 PAS domain LA59_26165 PF00563 EAL domain LA59_26165 PF00990 Diguanylate cyclase, GGDEF domain LA59_26170 PF07055 Enoyl reductase FAD binding domain LA59_26170 PF12241 Trans-2-enoyl-CoA reductase catalytic region LA59_26170 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LA59_26175 PF13472 GDSL-like Lipase/Acylhydrolase family LA59_26180 PF00005 ABC transporter LA59_26195 PF02626 Carboxyltransferase domain, subdomain A and B LA59_26200 PF02682 Carboxyltransferase domain, subdomain C and D LA59_26205 PF03746 LamB/YcsF family LA59_26210 PF00990 Diguanylate cyclase, GGDEF domain LA59_26210 PF08447 PAS fold LA59_26210 PF00563 EAL domain LA59_26210 PF13426 PAS domain LA59_26210 PF05231 MASE1 LA59_26210 PF08448 PAS fold LA59_26215 PF16363 GDP-mannose 4,6 dehydratase LA59_26220 PF04886 PT repeat LA59_26220 PF00593 TonB dependent receptor LA59_26220 PF07715 TonB-dependent Receptor Plug Domain LA59_26225 PF03466 LysR substrate binding domain LA59_26225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LA59_26230 PF04886 PT repeat LA59_26230 PF07715 TonB-dependent Receptor Plug Domain LA59_26230 PF00593 TonB dependent receptor LA59_26235 PF00583 Acetyltransferase (GNAT) family LA59_26235 PF13380 CoA binding domain LA59_26235 PF13607 Succinyl-CoA ligase like flavodoxin domain LA59_26240 PF05036 Sporulation related domain LA59_26245 PF01820 D-ala D-ala ligase N-terminus LA59_26245 PF07478 D-ala D-ala ligase C-terminus LA59_26255 PF01253 Translation initiation factor SUI1 LA59_26325 PF00072 Response regulator receiver domain LA59_26325 PF00486 Transcriptional regulatory protein, C terminal LA59_26335 PF02233 NAD(P) transhydrogenase beta subunit LA59_26340 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LA59_26340 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LA59_26340 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LA59_26355 PF00990 Diguanylate cyclase, GGDEF domain LA59_26355 PF17158 Membrane-associated sensor, integral membrane domain LA59_26370 PF00990 Diguanylate cyclase, GGDEF domain LA59_26370 PF00563 EAL domain LA59_26370 PF00360 Phytochrome region LA59_26370 PF01590 GAF domain LA59_26380 PF00005 ABC transporter LA59_26380 PF03459 TOBE domain LA59_26385 PF00528 Binding-protein-dependent transport system inner membrane component LA59_26395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LA59_26395 PF07685 CobB/CobQ-like glutamine amidotransferase domain LA59_26400 PF04076 Bacterial OB fold (BOF) protein LA59_26410 PF18030 RimK PreATP-grasp domain LA59_26410 PF08443 RimK-like ATP-grasp domain LA59_26415 PF00155 Aminotransferase class I and II LA59_26420 PF12833 Helix-turn-helix domain LA59_26425 PF01554 MatE LA59_26435 PF03477 ATP cone domain LA59_26435 PF13597 Anaerobic ribonucleoside-triphosphate reductase LA59_26450 PF04143 Sulphur transport LA59_26460 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_26460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LA59_26490 PF07690 Major Facilitator Superfamily LA59_26495 PF00196 Bacterial regulatory proteins, luxR family LA59_26495 PF00072 Response regulator receiver domain LA59_26500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LA59_26500 PF07730 Histidine kinase LA59_26500 PF05231 MASE1 LA59_26505 PF07690 Major Facilitator Superfamily LA59_26510 PF01238 Phosphomannose isomerase type I LA59_26520 PF01594 AI-2E family transporter LA59_26530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LA59_26530 PF00529 HlyD membrane-fusion protein of T1SS LA59_26555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LA59_26555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LA59_26560 PF00085 Thioredoxin LA59_26565 PF07690 Major Facilitator Superfamily LA59_26580 PF11756 Nitrous oxide-stimulated promoter LA59_26595 PF00593 TonB dependent receptor LA59_26595 PF07715 TonB-dependent Receptor Plug Domain LA59_26605 PF03605 Anaerobic c4-dicarboxylate membrane transporter LA59_26620 PF10414 Sirohaem synthase dimerisation region LA59_26620 PF14824 Sirohaem biosynthesis protein central LA59_26620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LA59_26625 PF01226 Formate/nitrite transporter LA59_26630 PF13806 Rieske-like [2Fe-2S] domain LA59_26635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LA59_26635 PF07992 Pyridine nucleotide-disulphide oxidoreductase LA59_26635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LA59_26635 PF18267 Rubredoxin NAD+ reductase C-terminal domain LA59_26635 PF04324 BFD-like [2Fe-2S] binding domain LA59_26640 PF00990 Diguanylate cyclase, GGDEF domain LA59_26640 PF00563 EAL domain LA59_26640 PF13426 PAS domain LA59_26690 PF00128 Alpha amylase, catalytic domain LA59_26690 PF09154 Domain of unknown function (DUF1939)