AL538_00010 SM00382 ATPases associated with a variety of cellular activities AL538_00010 SM00448 cheY-homologous receiver domain AL538_00070 SM00448 cheY-homologous receiver domain AL538_00075 SM00267 diguanylate cyclase AL538_00085 SM00528 Domain in histone-like proteins of HNS family AL538_00110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_00120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_00185 SM00829 Enoylreductase AL538_00220 SM00327 von Willebrand factor (vWF) type A domain AL538_00235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_00235 SM00866 AL538_00235 AL538_00245 SM00862 Transcriptional regulatory protein, C terminal AL538_00310 SM00487 DEAD-like helicases superfamily AL538_00310 SM00490 helicase superfamily c-terminal domain AL538_00335 SM01101 AL538_00335 AL538_00435 SM00862 Transcriptional regulatory protein, C terminal AL538_00470 SM00382 ATPases associated with a variety of cellular activities AL538_00520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_00565 SM01144 AL538_00565 AL538_00580 SM00852 Probable molybdopterin binding domain AL538_00590 SM00382 ATPases associated with a variety of cellular activities AL538_00605 SM00382 ATPases associated with a variety of cellular activities AL538_00605 SM00448 cheY-homologous receiver domain AL538_00610 SM00387 Histidine kinase-like ATPases AL538_00610 SM00388 His Kinase A (phosphoacceptor) domain AL538_00625 SM00382 ATPases associated with a variety of cellular activities AL538_00660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL538_00710 SM00382 ATPases associated with a variety of cellular activities AL538_00740 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_00740 SM00419 helix_turn_helix, cAMP Regulatory protein AL538_00790 SM00897 FIST N domain AL538_00790 SM01204 AL538_00790 AL538_00795 SM00387 Histidine kinase-like ATPases AL538_00795 SM00388 His Kinase A (phosphoacceptor) domain AL538_00795 SM00448 cheY-homologous receiver domain AL538_00845 SM00382 ATPases associated with a variety of cellular activities AL538_00855 SM00981 AL538_00855 AL538_00885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL538_00885 SM00245 tail specific protease AL538_00890 SM00945 ProQ/FINO family AL538_00900 SM00382 ATPases associated with a variety of cellular activities AL538_00950 SM00062 Bacterial periplasmic substrate-binding proteins AL538_00965 SM00382 ATPases associated with a variety of cellular activities AL538_00985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_00990 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL538_01010 SM00267 diguanylate cyclase AL538_01015 SM00387 Histidine kinase-like ATPases AL538_01015 SM00388 His Kinase A (phosphoacceptor) domain AL538_01015 SM00448 cheY-homologous receiver domain AL538_01030 SM01266 AL538_01030 AL538_01040 SM01118 AL538_01040 AL538_01050 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_01090 SM00327 von Willebrand factor (vWF) type A domain AL538_01160 SM00342 helix_turn_helix, arabinose operon control protein AL538_01175 SM00052 Putative diguanylate phosphodiesterase AL538_01185 SM01350 AL538_01185 AL538_01200 SM00342 helix_turn_helix, arabinose operon control protein AL538_01200 SM00871 Bacterial transcription activator, effector binding domain AL538_01210 SM00448 cheY-homologous receiver domain AL538_01215 SM00091 PAS domain AL538_01215 SM00387 Histidine kinase-like ATPases AL538_01330 SM01080 AL538_01330 AL538_01345 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_01410 SM00479 AL538_01410 AL538_01415 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_01415 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_01450 SM00342 helix_turn_helix, arabinose operon control protein AL538_01475 SM00382 ATPases associated with a variety of cellular activities AL538_01495 SM00495 Chitin-binding domain type 3 AL538_01530 SM00764 Citrate lyase ligase C-terminal domain AL538_01555 SM00091 PAS domain AL538_01555 SM00387 Histidine kinase-like ATPases AL538_01560 SM00448 cheY-homologous receiver domain AL538_01695 SM00382 ATPases associated with a variety of cellular activities AL538_01700 SM00382 ATPases associated with a variety of cellular activities AL538_01715 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL538_01720 SM00247 Beta/gamma crystallins AL538_01725 SM00388 His Kinase A (phosphoacceptor) domain AL538_01730 SM00448 cheY-homologous receiver domain AL538_01730 SM00862 Transcriptional regulatory protein, C terminal AL538_01735 SM00862 Transcriptional regulatory protein, C terminal AL538_01780 SM00382 ATPases associated with a variety of cellular activities AL538_01785 SM01130 AL538_01785 AL538_01815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_01815 SM00895 AL538_01815 AL538_01825 SM00267 diguanylate cyclase AL538_01920 SM00382 ATPases associated with a variety of cellular activities AL538_01940 SM00855 Phosphoglycerate mutase family AL538_01960 SM00903 Flavin reductase like domain AL538_01980 SM00479 AL538_01980 AL538_02015 SM00411 bacterial (prokaryotic) histone like domain AL538_02055 SM00873 B3/4 domain AL538_02055 SM00874 tRNA synthetase B5 domain AL538_02055 SM00896 Ferredoxin-fold anticodon binding domain AL538_02065 SM00267 diguanylate cyclase AL538_02090 SM00530 Helix-turn-helix XRE-family like proteins AL538_02130 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL538_02145 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_02145 SM00866 AL538_02145 AL538_02200 SM00671 Sel1-like repeats. AL538_02510 SM00507 HNH nucleases AL538_02555 SM00901 AL538_02555 AL538_02815 SM01022 AL538_02815 AL538_02950 SM00091 PAS domain AL538_02950 SM00382 ATPases associated with a variety of cellular activities AL538_02980 SM00387 Histidine kinase-like ATPases AL538_02980 SM00388 His Kinase A (phosphoacceptor) domain AL538_02980 SM00448 cheY-homologous receiver domain AL538_03005 SM00052 Putative diguanylate phosphodiesterase AL538_03015 SM00421 helix_turn_helix, Lux Regulon AL538_03025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_03025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_03045 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_03060 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_03075 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_03075 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_03080 SM00479 AL538_03080 AL538_03085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_03085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_03095 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_03100 SM00421 helix_turn_helix, Lux Regulon AL538_03100 SM00448 cheY-homologous receiver domain AL538_03105 SM00387 Histidine kinase-like ATPases AL538_03105 SM01049 AL538_03105 AL538_03135 SM00849 Metallo-beta-lactamase superfamily AL538_03225 SM00434 DNA Topoisomerase IV AL538_03255 SM00852 Probable molybdopterin binding domain AL538_03315 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL538_03315 SM00465 GIY-YIG type nucleases (URI domain) AL538_03320 SM00421 helix_turn_helix, Lux Regulon AL538_03320 SM00448 cheY-homologous receiver domain AL538_03325 SM00486 DNA polymerase type-B family AL538_03335 SM00841 Elongation factor P, C-terminal AL538_03335 SM01185 AL538_03335 AL538_03345 SM00363 S4 RNA-binding domain AL538_03360 SM00481 DNA polymerase alpha chain like domain AL538_03410 SM00387 Histidine kinase-like ATPases AL538_03410 SM00388 His Kinase A (phosphoacceptor) domain AL538_03410 SM00448 cheY-homologous receiver domain AL538_03460 SM00052 Putative diguanylate phosphodiesterase AL538_03460 SM00091 PAS domain AL538_03465 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_03490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_03490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_03510 SM00448 cheY-homologous receiver domain AL538_03510 SM00862 Transcriptional regulatory protein, C terminal AL538_03515 SM00387 Histidine kinase-like ATPases AL538_03515 SM00388 His Kinase A (phosphoacceptor) domain AL538_03520 SM00220 Serine/Threonine protein kinases, catalytic domain AL538_03520 SM00364 Leucine-rich repeats, bacterial type AL538_03520 SM00369 Leucine-rich repeats, typical (most populated) subfamily AL538_03550 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_03580 SM00128 Inositol polyphosphate phosphatase, catalytic domain homologues AL538_03595 SM00382 ATPases associated with a variety of cellular activities AL538_03635 SM00530 Helix-turn-helix XRE-family like proteins AL538_03745 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL538_03750 SM00028 Tetratricopeptide repeats AL538_03760 SM00411 bacterial (prokaryotic) histone like domain AL538_03765 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_03780 SM00822 AL538_03780 AL538_03815 SM00481 DNA polymerase alpha chain like domain AL538_03820 SM00260 Two component signalling adaptor domain AL538_03820 SM00448 cheY-homologous receiver domain AL538_03885 SM00825 Beta-ketoacyl synthase AL538_03895 SM00822 AL538_03895 AL538_03900 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL538_03930 SM00363 S4 RNA-binding domain AL538_03935 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_03950 SM00226 Low molecular weight phosphatase family AL538_03985 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_04010 SM00267 diguanylate cyclase AL538_04015 SM00642 Alpha-amylase domain AL538_04020 SM00382 ATPases associated with a variety of cellular activities AL538_04065 SM00382 ATPases associated with a variety of cellular activities AL538_04070 SM00382 ATPases associated with a variety of cellular activities AL538_04105 SM00852 Probable molybdopterin binding domain AL538_04110 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_04125 SM00382 ATPases associated with a variety of cellular activities AL538_04125 SM00448 cheY-homologous receiver domain AL538_04130 SM00487 DEAD-like helicases superfamily AL538_04130 SM00490 helicase superfamily c-terminal domain AL538_04165 SM00900 AL538_04165 AL538_04175 SM00478 endonuclease III AL538_04175 SM00525 AL538_04175 AL538_04195 SM00479 AL538_04195 AL538_04285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL538_04285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL538_04285 SM00493 AL538_04285 AL538_04315 SM00226 Low molecular weight phosphatase family AL538_04320 SM00382 ATPases associated with a variety of cellular activities AL538_04515 SM00910 AL538_04515 AL538_04565 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL538_04620 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL538_04620 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL538_04620 SM00493 AL538_04620 AL538_04640 SM00870 AL538_04640 AL538_04660 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_04675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_04675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_04700 SM00098 Alkaline phosphatase homologues AL538_04770 SM00493 AL538_04770 AL538_04780 SM00382 ATPases associated with a variety of cellular activities AL538_04795 SM00448 cheY-homologous receiver domain AL538_04840 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL538_04850 SM00825 Beta-ketoacyl synthase AL538_04890 SM00463 Small MutS-related domain AL538_04895 SM00855 Phosphoglycerate mutase family AL538_04980 SM00382 ATPases associated with a variety of cellular activities AL538_04990 SM00260 Two component signalling adaptor domain AL538_04995 SM00260 Two component signalling adaptor domain AL538_05005 SM00448 cheY-homologous receiver domain AL538_05010 SM00073 Histidine Phosphotransfer domain AL538_05010 SM00260 Two component signalling adaptor domain AL538_05010 SM00387 Histidine kinase-like ATPases AL538_05010 SM01231 AL538_05010 AL538_05020 SM00448 cheY-homologous receiver domain AL538_05035 SM00382 ATPases associated with a variety of cellular activities AL538_05035 SM00962 SRP54-type protein, GTPase domain AL538_05100 SM00382 ATPases associated with a variety of cellular activities AL538_05125 SM00382 ATPases associated with a variety of cellular activities AL538_05125 SM00448 cheY-homologous receiver domain AL538_05130 SM00387 Histidine kinase-like ATPases AL538_05130 SM00388 His Kinase A (phosphoacceptor) domain AL538_05135 SM00382 ATPases associated with a variety of cellular activities AL538_05190 SM00342 helix_turn_helix, arabinose operon control protein AL538_05245 SM01130 AL538_05245 AL538_05270 SM00028 Tetratricopeptide repeats AL538_05345 SM00479 AL538_05345 AL538_05360 SM00849 Metallo-beta-lactamase superfamily AL538_05365 SM00257 Lysin motif AL538_05380 SM00938 Nitrogen regulatory protein P-II AL538_05390 SM00977 TilS substrate C-terminal domain AL538_05400 SM00481 DNA polymerase alpha chain like domain AL538_05430 SM00935 Outer membrane protein (OmpH-like) AL538_05440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL538_05485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_05545 SM00849 Metallo-beta-lactamase superfamily AL538_05605 SM00495 Chitin-binding domain type 3 AL538_05605 SM00636 AL538_05605 AL538_05620 SM00487 DEAD-like helicases superfamily AL538_05620 SM00490 helicase superfamily c-terminal domain AL538_05630 SM00267 diguanylate cyclase AL538_05630 SM00448 cheY-homologous receiver domain AL538_05660 SM00900 AL538_05660 AL538_05750 SM00925 MltA specific insert domain AL538_05840 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_05840 SM01134 AL538_05840 AL538_05875 SM00354 helix_turn _helix lactose operon repressor AL538_05910 SM00354 helix_turn _helix lactose operon repressor AL538_05915 SM01038 Beta galactosidase small chain AL538_05955 SM00327 von Willebrand factor (vWF) type A domain AL538_05960 SM00028 Tetratricopeptide repeats AL538_05975 SM00382 ATPases associated with a variety of cellular activities AL538_05995 SM00858 AL538_05995 AL538_06015 SM00342 helix_turn_helix, arabinose operon control protein AL538_06035 SM00838 Elongation factor G C-terminus AL538_06035 SM00889 Elongation factor G, domain IV AL538_06040 SM00382 ATPases associated with a variety of cellular activities AL538_06070 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AL538_06075 SM01133 AL538_06075 AL538_06095 SM00267 diguanylate cyclase AL538_06125 SM00052 Putative diguanylate phosphodiesterase AL538_06125 SM00091 PAS domain AL538_06125 SM00267 diguanylate cyclase AL538_06145 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_06150 SM00028 Tetratricopeptide repeats AL538_06155 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_06155 SM00322 K homology RNA-binding domain AL538_06160 SM01387 AL538_06160 AL538_06180 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_06215 SM00382 ATPases associated with a variety of cellular activities AL538_06225 SM01103 AL538_06225 AL538_06295 SM00091 PAS domain AL538_06295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_06295 SM00387 Histidine kinase-like ATPases AL538_06295 SM00388 His Kinase A (phosphoacceptor) domain AL538_06295 SM00448 cheY-homologous receiver domain AL538_06315 SM00382 ATPases associated with a variety of cellular activities AL538_06320 SM00382 ATPases associated with a variety of cellular activities AL538_06340 SM01068 Putative carbohydrate binding domain AL538_06350 SM00382 ATPases associated with a variety of cellular activities AL538_06370 SM00938 Nitrogen regulatory protein P-II AL538_06395 SM00487 DEAD-like helicases superfamily AL538_06395 SM00490 helicase superfamily c-terminal domain AL538_06395 SM00847 Helicase associated domain (HA2) Add an annotation AL538_06445 SM00382 ATPases associated with a variety of cellular activities AL538_06455 SM00947 Carbonic anhydrase AL538_06485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_06485 SM00895 AL538_06485 AL538_06490 SM00644 AL538_06490 AL538_06560 SM00382 ATPases associated with a variety of cellular activities AL538_06560 SM00962 SRP54-type protein, GTPase domain AL538_06560 SM00963 SRP54-type protein, helical bundle domain AL538_06570 SM01091 Transporter associated domain AL538_06600 SM00829 Enoylreductase AL538_06680 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL538_06690 SM00382 ATPases associated with a variety of cellular activities AL538_06700 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL538_06700 SM00534 ATPase domain of DNA mismatch repair MUTS family AL538_06710 SM00257 Lysin motif AL538_06745 SM01192 AL538_06745 AL538_06745 SM01193 AL538_06745 AL538_06760 SM00954 Region found in RelA / SpoT proteins AL538_06770 SM00073 Histidine Phosphotransfer domain AL538_06770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_06770 SM00387 Histidine kinase-like ATPases AL538_06770 SM00388 His Kinase A (phosphoacceptor) domain AL538_06770 SM00448 cheY-homologous receiver domain AL538_06795 SM00358 Double-stranded RNA binding motif AL538_06795 SM00535 Ribonuclease III family AL538_06805 SM00838 Elongation factor G C-terminus AL538_06935 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_06945 SM00861 Transketolase, pyrimidine binding domain AL538_06960 SM00731 SprT homologues. AL538_06985 SM00732 Likely ribonuclease with RNase H fold. AL538_06995 SM00382 ATPases associated with a variety of cellular activities AL538_07015 SM01152 AL538_07015 AL538_07030 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_07050 SM00478 endonuclease III AL538_07050 SM00525 AL538_07050 AL538_07100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_07100 SM01049 AL538_07100 AL538_07175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_07180 SM00354 helix_turn _helix lactose operon repressor AL538_07225 SM00822 AL538_07225 AL538_07305 SM00563 Phosphate acyltransferases AL538_07340 SM00382 ATPases associated with a variety of cellular activities AL538_07350 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_07365 SM00382 ATPases associated with a variety of cellular activities AL538_07395 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_07395 SM00924 MgtE intracellular N domain AL538_07425 SM00487 DEAD-like helicases superfamily AL538_07425 SM00490 helicase superfamily c-terminal domain AL538_07430 SM00670 Large family of predicted nucleotide-binding domains AL538_07450 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_07520 SM00382 ATPases associated with a variety of cellular activities AL538_07525 SM00028 Tetratricopeptide repeats AL538_07535 SM00965 Secretin and TonB N terminus short domain AL538_07555 SM00052 Putative diguanylate phosphodiesterase AL538_07555 SM00267 diguanylate cyclase AL538_07565 SM00421 helix_turn_helix, Lux Regulon AL538_07595 SM01018 B12 binding domain AL538_07710 SM01005 Alanine racemase, C-terminal domain AL538_07765 SM00965 Secretin and TonB N terminus short domain AL538_07830 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL538_07870 SM00919 Malic enzyme, NAD binding domain AL538_07870 SM01274 AL538_07870 AL538_07890 SM00838 Elongation factor G C-terminus AL538_07890 SM00889 Elongation factor G, domain IV AL538_07930 SM00320 WD40 repeats AL538_07965 SM00382 ATPases associated with a variety of cellular activities AL538_07990 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_07990 SM00419 helix_turn_helix, cAMP Regulatory protein AL538_07995 SM01150 AL538_07995 AL538_08045 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL538_08050 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_08050 SM00357 Cold shock protein domain AL538_08050 SM00955 AL538_08050 AL538_08065 SM00671 Sel1-like repeats. AL538_08070 SM00788 Adenylosuccinate synthetase AL538_08080 SM00244 prohibitin homologues AL538_08085 SM00244 prohibitin homologues AL538_08105 SM00853 MutL C terminal dimerisation domain AL538_08105 SM01340 AL538_08105 AL538_08110 SM00257 Lysin motif AL538_08110 SM00646 AL538_08110 AL538_08185 SM00479 AL538_08185 AL538_08205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_08205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_08220 SM00450 Rhodanese Homology Domain AL538_08235 SM00971 Serine acetyltransferase, N-terminal AL538_08295 SM00841 Elongation factor P, C-terminal AL538_08295 SM01185 AL538_08295 AL538_08330 SM00857 Resolvase, N terminal domain AL538_08345 SM00883 Chaperonin 10 Kd subunit AL538_08370 SM00448 cheY-homologous receiver domain AL538_08370 SM00862 Transcriptional regulatory protein, C terminal AL538_08375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_08375 SM00387 Histidine kinase-like ATPases AL538_08375 SM00388 His Kinase A (phosphoacceptor) domain AL538_08410 SM00421 helix_turn_helix, Lux Regulon AL538_08410 SM00448 cheY-homologous receiver domain AL538_08445 SM00387 Histidine kinase-like ATPases AL538_08445 SM00388 His Kinase A (phosphoacceptor) domain AL538_08445 SM00448 cheY-homologous receiver domain AL538_08460 SM00479 AL538_08460 AL538_08480 SM00878 Biotin carboxylase C-terminal domain AL538_08500 SM00267 diguanylate cyclase AL538_08550 SM00829 Enoylreductase AL538_08570 SM00862 Transcriptional regulatory protein, C terminal AL538_08575 SM00422 helix_turn_helix, mercury resistance AL538_08585 SM00798 AICARFT/IMPCHase bienzyme AL538_08585 SM00851 MGS-like domain AL538_08590 SM01209 AL538_08590 AL538_08590 SM01210 AL538_08590 AL538_08600 SM00411 bacterial (prokaryotic) histone like domain AL538_08620 SM00986 Uracil DNA glycosylase superfamily AL538_08620 SM00987 UreE urease accessory protein, C-terminal domain AL538_08650 SM00663 RNA polymerase I subunit A N-terminus AL538_08675 SM00649 Ribosomal protein L11/L12 AL538_08680 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL538_08680 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL538_08735 SM00155 Phospholipase D. Active site motifs. AL538_08805 SM00360 RNA recognition motif AL538_08830 SM00954 Region found in RelA / SpoT proteins AL538_08950 SM00563 Phosphate acyltransferases AL538_08975 SM00450 Rhodanese Homology Domain AL538_08990 SM00382 ATPases associated with a variety of cellular activities AL538_08995 SM00382 ATPases associated with a variety of cellular activities AL538_08995 SM00962 SRP54-type protein, GTPase domain AL538_08995 SM00963 SRP54-type protein, helical bundle domain AL538_09055 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_09060 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_09095 SM01144 AL538_09095 AL538_09100 SM00052 Putative diguanylate phosphodiesterase AL538_09100 SM00267 diguanylate cyclase AL538_09100 SM00897 FIST N domain AL538_09100 SM01204 AL538_09100 AL538_09135 SM01219 AL538_09135 AL538_09215 SM00357 Cold shock protein domain AL538_09215 SM00382 ATPases associated with a variety of cellular activities AL538_09215 SM00959 Rho termination factor, N-terminal domain AL538_09225 SM00487 DEAD-like helicases superfamily AL538_09225 SM00490 helicase superfamily c-terminal domain AL538_09245 SM00341 Helicase and RNase D C-terminal AL538_09245 SM00487 DEAD-like helicases superfamily AL538_09245 SM00490 helicase superfamily c-terminal domain AL538_09245 SM00956 AL538_09245 AL538_09255 SM00342 helix_turn_helix, arabinose operon control protein AL538_09320 SM00876 Biotin and Thiamin Synthesis associated domain AL538_09425 SM01001 AIR carboxylase AL538_09450 SM00257 Lysin motif AL538_09515 SM00563 Phosphate acyltransferases AL538_09525 SM00267 diguanylate cyclase AL538_09530 SM00382 ATPases associated with a variety of cellular activities AL538_09570 SM00062 Bacterial periplasmic substrate-binding proteins AL538_09590 SM00382 ATPases associated with a variety of cellular activities AL538_09630 SM00470 ParB-like nuclease domain AL538_09645 SM01228 AL538_09645 AL538_09675 SM00382 ATPases associated with a variety of cellular activities AL538_09685 SM00062 Bacterial periplasmic substrate-binding proteins AL538_09685 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL538_09690 SM00382 ATPases associated with a variety of cellular activities AL538_09690 SM00760 Bacterial dnaA protein helix-turn-helix domain AL538_09695 SM00480 DNA polymerase III beta subunit AL538_09705 SM00387 Histidine kinase-like ATPases AL538_09705 SM00433 TopoisomeraseII AL538_09720 SM00642 Alpha-amylase domain AL538_09760 SM00829 Enoylreductase AL538_09900 SM00382 ATPases associated with a variety of cellular activities AL538_09945 SM00220 Serine/Threonine protein kinases, catalytic domain AL538_09950 SM00354 helix_turn _helix lactose operon repressor AL538_10025 SM00344 helix_turn_helix ASNC type AL538_10030 SM00052 Putative diguanylate phosphodiesterase AL538_10030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL538_10030 SM00091 PAS domain AL538_10030 SM00267 diguanylate cyclase AL538_10075 SM00052 Putative diguanylate phosphodiesterase AL538_10075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL538_10075 SM00091 PAS domain AL538_10075 SM00267 diguanylate cyclase AL538_10125 SM01004 Delta-aminolevulinic acid dehydratase AL538_10135 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL538_10135 SM00474 3'-5' exonuclease AL538_10135 SM00475 5'-3' exonuclease AL538_10135 SM00482 DNA polymerase A domain AL538_10165 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_10175 SM00052 Putative diguanylate phosphodiesterase AL538_10175 SM00267 diguanylate cyclase AL538_10175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_10180 SM00382 ATPases associated with a variety of cellular activities AL538_10180 SM00448 cheY-homologous receiver domain AL538_10185 SM00091 PAS domain AL538_10185 SM00387 Histidine kinase-like ATPases AL538_10185 SM00388 His Kinase A (phosphoacceptor) domain AL538_10195 SM01230 AL538_10195 AL538_10200 SM00838 Elongation factor G C-terminus AL538_10245 SM00363 S4 RNA-binding domain AL538_10260 SM00382 ATPases associated with a variety of cellular activities AL538_10340 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_10340 SM00732 Likely ribonuclease with RNase H fold. AL538_10355 SM00448 cheY-homologous receiver domain AL538_10355 SM00862 Transcriptional regulatory protein, C terminal AL538_10360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_10360 SM00387 Histidine kinase-like ATPases AL538_10360 SM00388 His Kinase A (phosphoacceptor) domain AL538_10375 SM00487 DEAD-like helicases superfamily AL538_10375 SM00490 helicase superfamily c-terminal domain AL538_10385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_10385 SM00954 Region found in RelA / SpoT proteins AL538_10390 SM01409 AL538_10390 AL538_10395 SM00072 Guanylate kinase homologues. AL538_10400 SM00028 Tetratricopeptide repeats AL538_10450 SM00382 ATPases associated with a variety of cellular activities AL538_10455 SM00382 ATPases associated with a variety of cellular activities AL538_10480 SM00862 Transcriptional regulatory protein, C terminal AL538_10515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_10515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_10515 SM01049 AL538_10515 AL538_10545 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL538_10545 SM01232 AL538_10545 AL538_10555 SM00672 Putative lipopolysaccharide-modifying enzyme. AL538_10735 SM00984 UDP binding domain AL538_10740 SM00849 Metallo-beta-lactamase superfamily AL538_10740 SM01027 Beta-Casp domain AL538_10790 SM00382 ATPases associated with a variety of cellular activities AL538_10790 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_10805 SM00354 helix_turn _helix lactose operon repressor AL538_10810 SM00487 DEAD-like helicases superfamily AL538_10810 SM00490 helicase superfamily c-terminal domain AL538_10820 SM01403 AL538_10820 AL538_10840 SM01382 AL538_10840 AL538_10840 SM01383 AL538_10840 AL538_10855 SM00322 K homology RNA-binding domain AL538_10875 SM01374 AL538_10875 AL538_10880 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL538_10945 SM00363 S4 RNA-binding domain AL538_10945 SM01390 AL538_10945 AL538_10950 SM00662 RNA polymerases D AL538_10985 SM00487 DEAD-like helicases superfamily AL538_10985 SM00490 helicase superfamily c-terminal domain AL538_11040 SM00382 ATPases associated with a variety of cellular activities AL538_11115 SM00382 ATPases associated with a variety of cellular activities AL538_11195 SM00650 Ribosomal RNA adenine dimethylases AL538_11215 SM00271 DnaJ molecular chaperone homology domain AL538_11235 SM01329 AL538_11235 AL538_11240 SM00917 LeuA allosteric (dimerisation) domain AL538_11250 SM00014 Acid phosphatase homologues AL538_11280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL538_11280 SM00267 diguanylate cyclase AL538_11285 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_11285 SM00895 AL538_11285 AL538_11295 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_11295 SM01134 AL538_11295 AL538_11315 SM00448 cheY-homologous receiver domain AL538_11315 SM00862 Transcriptional regulatory protein, C terminal AL538_11320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_11320 SM00387 Histidine kinase-like ATPases AL538_11320 SM00388 His Kinase A (phosphoacceptor) domain AL538_11345 SM00563 Phosphate acyltransferases AL538_11375 SM00400 zinc finger AL538_11375 SM00493 AL538_11375 AL538_11375 SM00766 DNA primase DnaG DnaB-binding AL538_11400 SM01207 AL538_11400 AL538_11405 SM00905 Dihydroneopterin aldolase AL538_11425 SM00382 ATPases associated with a variety of cellular activities AL538_11435 SM00287 Bacterial SH3 domain homologues AL538_11450 SM00880 AL538_11450 AL538_11450 SM01118 AL538_11450 AL538_11460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_11500 SM00387 Histidine kinase-like ATPases AL538_11500 SM00433 TopoisomeraseII AL538_11505 SM00434 DNA Topoisomerase IV AL538_11510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL538_11515 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL538_11570 SM00749 bacterial OsmY and nodulation domain AL538_11655 SM00842 Cell division protein FtsA AL538_11660 SM00864 Tubulin/FtsZ family, GTPase domain AL538_11660 SM00865 Tubulin/FtsZ family, C-terminal domain AL538_11670 SM00957 SecA DEAD-like domain AL538_11670 SM00958 SecA preprotein cross-linking domain AL538_11685 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL538_11690 SM00851 MGS-like domain AL538_11690 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL538_11765 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_11770 SM00091 PAS domain AL538_11770 SM00267 diguanylate cyclase AL538_11780 SM00073 Histidine Phosphotransfer domain AL538_11780 SM00091 PAS domain AL538_11780 SM00387 Histidine kinase-like ATPases AL538_11780 SM00388 His Kinase A (phosphoacceptor) domain AL538_11780 SM00448 cheY-homologous receiver domain AL538_11790 SM00448 cheY-homologous receiver domain AL538_11790 SM00862 Transcriptional regulatory protein, C terminal AL538_11835 SM00518 AP endonuclease family 2 AL538_11840 SM00986 Uracil DNA glycosylase superfamily AL538_11840 SM00987 UreE urease accessory protein, C-terminal domain AL538_11870 SM00487 DEAD-like helicases superfamily AL538_11870 SM00490 helicase superfamily c-terminal domain AL538_11915 SM00382 ATPases associated with a variety of cellular activities AL538_11935 SM00927 DNA mismatch repair enzyme MutH AL538_11945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL538_11975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_11990 SM00904 Riboflavin kinase AL538_12015 SM00448 cheY-homologous receiver domain AL538_12015 SM00850 LytTr DNA-binding domain AL538_12060 SM00830 Chorismate mutase type II AL538_12075 SM00382 ATPases associated with a variety of cellular activities AL538_12095 SM00830 Chorismate mutase type II AL538_12105 SM00062 Bacterial periplasmic substrate-binding proteins AL538_12115 SM00363 S4 RNA-binding domain AL538_12125 SM00382 ATPases associated with a variety of cellular activities AL538_12125 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_12195 SM00448 cheY-homologous receiver domain AL538_12195 SM00862 Transcriptional regulatory protein, C terminal AL538_12200 SM00091 PAS domain AL538_12200 SM00387 Histidine kinase-like ATPases AL538_12200 SM00388 His Kinase A (phosphoacceptor) domain AL538_12230 SM00382 ATPases associated with a variety of cellular activities AL538_12285 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_12295 SM00020 Trypsin-like serine protease AL538_12310 SM01323 AL538_12310 AL538_12365 SM00271 DnaJ molecular chaperone homology domain AL538_12390 SM00562 AL538_12390 AL538_12400 SM00530 Helix-turn-helix XRE-family like proteins AL538_12420 SM00564 beta-propeller repeat AL538_12425 SM00382 ATPases associated with a variety of cellular activities AL538_12435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL538_12435 SM00267 diguanylate cyclase AL538_12445 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_12445 SM01240 AL538_12445 AL538_12460 SM00495 Chitin-binding domain type 3 AL538_12510 SM00382 ATPases associated with a variety of cellular activities AL538_12570 SM00248 ankyrin repeats AL538_12735 SM00271 DnaJ molecular chaperone homology domain AL538_12775 SM00062 Bacterial periplasmic substrate-binding proteins AL538_12780 SM01211 AL538_12780 AL538_12835 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL538_12885 SM00861 Transketolase, pyrimidine binding domain AL538_12910 SM00981 AL538_12910 AL538_12935 SM00477 DNA/RNA non-specific endonuclease AL538_12935 SM00892 DNA/RNA non-specific endonuclease AL538_12940 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL538_12940 SM00475 5'-3' exonuclease AL538_12950 SM00267 diguanylate cyclase AL538_12955 SM00028 Tetratricopeptide repeats AL538_12995 SM00382 ATPases associated with a variety of cellular activities AL538_12995 SM00930 AL538_12995 AL538_13005 SM00354 helix_turn _helix lactose operon repressor AL538_13015 SM00642 Alpha-amylase domain AL538_13025 SM00862 Transcriptional regulatory protein, C terminal AL538_13040 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_13055 SM00936 Penicillin-binding protein 5, C-terminal domain AL538_13110 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_13110 SM01091 Transporter associated domain AL538_13125 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_13250 SM01400 AL538_13250 AL538_13270 SM00937 AL538_13270 AL538_13305 SM00363 S4 RNA-binding domain AL538_13310 SM00463 Small MutS-related domain AL538_13335 SM01081 Putative carbohydrate binding domain AL538_13420 SM00858 AL538_13420 AL538_13425 SM00260 Two component signalling adaptor domain AL538_13425 SM00448 cheY-homologous receiver domain AL538_13430 SM00138 Methyltransferase, chemotaxis proteins AL538_13475 SM00047 Lysozyme subfamily 2 AL538_13530 SM00771 ZipA, C-terminal domain (FtsZ-binding) AL538_13535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL538_13535 SM00292 breast cancer carboxy-terminal domain AL538_13535 SM00532 Ligase N family AL538_13555 SM00244 prohibitin homologues AL538_13585 SM00938 Nitrogen regulatory protein P-II AL538_13590 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_13620 SM00862 Transcriptional regulatory protein, C terminal AL538_13625 SM00387 Histidine kinase-like ATPases AL538_13645 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL538_13760 SM00861 Transketolase, pyrimidine binding domain AL538_13775 SM00881 CoA binding domain AL538_13785 SM00382 ATPases associated with a variety of cellular activities AL538_13795 SM00342 helix_turn_helix, arabinose operon control protein AL538_13800 SM00899 AL538_13800 AL538_13825 SM00836 DALR anticodon binding domain AL538_13825 SM01016 Arginyl tRNA synthetase N terminal dom AL538_13840 SM00487 DEAD-like helicases superfamily AL538_13840 SM00491 AL538_13840 AL538_13870 SM00474 3'-5' exonuclease AL538_13970 SM00487 DEAD-like helicases superfamily AL538_14030 SM00825 Beta-ketoacyl synthase AL538_14035 SM00822 AL538_14035 AL538_14045 SM00825 Beta-ketoacyl synthase AL538_14105 SM00563 Phosphate acyltransferases AL538_14165 SM00823 Phosphopantetheine attachment site AL538_14185 SM01091 Transporter associated domain AL538_14190 SM00487 DEAD-like helicases superfamily AL538_14190 SM00490 helicase superfamily c-terminal domain AL538_14205 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL538_14235 SM00382 ATPases associated with a variety of cellular activities AL538_14235 SM00448 cheY-homologous receiver domain AL538_14240 SM00387 Histidine kinase-like ATPases AL538_14240 SM00388 His Kinase A (phosphoacceptor) domain AL538_14255 SM00382 ATPases associated with a variety of cellular activities AL538_14255 SM00994 ClpX C4-type zinc finger AL538_14255 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_14260 SM00382 ATPases associated with a variety of cellular activities AL538_14260 SM00464 Found in ATP-dependent protease La (LON) AL538_14265 SM00411 bacterial (prokaryotic) histone like domain AL538_14275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL538_14285 SM01144 AL538_14285 AL538_14290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_14295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_14325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL538_14355 SM00563 Phosphate acyltransferases AL538_14365 SM00978 AL538_14365 AL538_14430 SM00344 helix_turn_helix ASNC type AL538_14465 SM00062 Bacterial periplasmic substrate-binding proteins AL538_14465 SM00267 diguanylate cyclase AL538_14475 SM00831 Cation transporter/ATPase, N-terminus AL538_14495 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_14520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_14520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_14570 SM00487 DEAD-like helicases superfamily AL538_14570 SM00490 helicase superfamily c-terminal domain AL538_14570 SM00982 AL538_14570 AL538_14570 SM01058 CarD-like/TRCF domain AL538_14585 SM00382 ATPases associated with a variety of cellular activities AL538_14600 SM00849 Metallo-beta-lactamase superfamily AL538_14605 SM00382 ATPases associated with a variety of cellular activities AL538_14635 SM00763 PrkA AAA domain AL538_14675 SM00382 ATPases associated with a variety of cellular activities AL538_14680 SM00062 Bacterial periplasmic substrate-binding proteins AL538_14680 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL538_14700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_14700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_14720 SM00491 AL538_14720 AL538_14745 SM00357 Cold shock protein domain AL538_14755 SM00382 ATPases associated with a variety of cellular activities AL538_14755 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_14760 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_14790 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL538_14790 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL538_14790 SM00493 AL538_14790 AL538_14825 SM00354 helix_turn _helix lactose operon repressor AL538_14835 SM00448 cheY-homologous receiver domain AL538_14835 SM00862 Transcriptional regulatory protein, C terminal AL538_14905 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_14910 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL538_14915 SM00382 ATPases associated with a variety of cellular activities AL538_14970 SM00028 Tetratricopeptide repeats AL538_14975 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_15030 SM00342 helix_turn_helix, arabinose operon control protein AL538_15080 SM00387 Histidine kinase-like ATPases AL538_15080 SM00388 His Kinase A (phosphoacceptor) domain AL538_15080 SM00448 cheY-homologous receiver domain AL538_15110 SM00342 helix_turn_helix, arabinose operon control protein AL538_15240 SM00382 ATPases associated with a variety of cellular activities AL538_15305 SM00422 helix_turn_helix, mercury resistance AL538_15320 SM00354 helix_turn _helix lactose operon repressor AL538_15335 SM00640 Glycosyl hydrolases family 32 AL538_15355 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_15355 SM00419 helix_turn_helix, cAMP Regulatory protein AL538_15385 SM00382 ATPases associated with a variety of cellular activities AL538_15390 SM00382 ATPases associated with a variety of cellular activities AL538_15410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_15410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_15435 SM00862 Transcriptional regulatory protein, C terminal AL538_15450 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_15455 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_15455 SM00895 AL538_15455 AL538_15485 SM00710 Parallel beta-helix repeats AL538_15505 SM00479 AL538_15505 AL538_15510 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_15510 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_15515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_15515 SM00895 AL538_15515 AL538_15525 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_15525 SM00895 AL538_15525 AL538_15605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_15645 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL538_15645 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL538_15650 SM00344 helix_turn_helix ASNC type AL538_15655 SM00843 AL538_15655 AL538_15665 SM00382 ATPases associated with a variety of cellular activities AL538_15695 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_15695 SM00876 Biotin and Thiamin Synthesis associated domain AL538_15785 SM00528 Domain in histone-like proteins of HNS family AL538_15795 SM00382 ATPases associated with a variety of cellular activities AL538_15845 SM00052 Putative diguanylate phosphodiesterase AL538_15860 SM00840 AL538_15860 AL538_15930 SM00382 ATPases associated with a variety of cellular activities AL538_15945 SM01131 AL538_15945 AL538_15955 SM00382 ATPases associated with a variety of cellular activities AL538_15960 SM00382 ATPases associated with a variety of cellular activities AL538_15980 SM00382 ATPases associated with a variety of cellular activities AL538_16035 SM00155 Phospholipase D. Active site motifs. AL538_16045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_16045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_16070 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL538_16070 SM00382 ATPases associated with a variety of cellular activities AL538_16080 SM00382 ATPases associated with a variety of cellular activities AL538_16110 SM00450 Rhodanese Homology Domain AL538_16115 SM00387 Histidine kinase-like ATPases AL538_16115 SM00388 His Kinase A (phosphoacceptor) domain AL538_16120 SM00421 helix_turn_helix, Lux Regulon AL538_16120 SM00448 cheY-homologous receiver domain AL538_16180 SM00387 Histidine kinase-like ATPases AL538_16185 SM00448 cheY-homologous receiver domain AL538_16185 SM00862 Transcriptional regulatory protein, C terminal AL538_16195 SM00487 DEAD-like helicases superfamily AL538_16195 SM00490 helicase superfamily c-terminal domain AL538_16200 SM00363 S4 RNA-binding domain AL538_16225 SM00354 helix_turn _helix lactose operon repressor AL538_16240 SM00382 ATPases associated with a variety of cellular activities AL538_16325 SM00448 cheY-homologous receiver domain AL538_16330 SM00387 Histidine kinase-like ATPases AL538_16350 SM00267 diguanylate cyclase AL538_16365 SM00530 Helix-turn-helix XRE-family like proteins AL538_16385 SM00382 ATPases associated with a variety of cellular activities AL538_16390 SM00382 ATPases associated with a variety of cellular activities AL538_16415 SM00267 diguanylate cyclase AL538_16430 SM00919 Malic enzyme, NAD binding domain AL538_16430 SM01274 AL538_16430 AL538_16435 SM00487 DEAD-like helicases superfamily AL538_16435 SM00490 helicase superfamily c-terminal domain AL538_16480 SM00100 Cyclic nucleotide-monophosphate binding domain AL538_16480 SM00387 Histidine kinase-like ATPases AL538_16485 SM00448 cheY-homologous receiver domain AL538_16490 SM00052 Putative diguanylate phosphodiesterase AL538_16490 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL538_16490 SM00091 PAS domain AL538_16490 SM00267 diguanylate cyclase AL538_16495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_16525 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AL538_16530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_16540 SM00267 diguanylate cyclase AL538_16570 SM00382 ATPases associated with a variety of cellular activities AL538_16600 SM00382 ATPases associated with a variety of cellular activities AL538_16605 SM00382 ATPases associated with a variety of cellular activities AL538_16660 SM00267 diguanylate cyclase AL538_16660 SM01079 AL538_16660 AL538_16665 SM00479 AL538_16665 AL538_16690 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL538_16720 SM00382 ATPases associated with a variety of cellular activities AL538_16720 SM00487 DEAD-like helicases superfamily AL538_16720 SM00490 helicase superfamily c-terminal domain AL538_16720 SM00847 Helicase associated domain (HA2) Add an annotation AL538_16740 SM00245 tail specific protease AL538_16745 SM00028 Tetratricopeptide repeats AL538_16800 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_16815 SM00421 helix_turn_helix, Lux Regulon AL538_16910 SM00062 Bacterial periplasmic substrate-binding proteins AL538_16910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_16915 SM00220 Serine/Threonine protein kinases, catalytic domain AL538_16950 SM00382 ATPases associated with a variety of cellular activities AL538_16950 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_17015 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_17015 SM00895 AL538_17015 AL538_17050 SM00020 Trypsin-like serine protease AL538_17050 SM00495 Chitin-binding domain type 3 AL538_17075 SM00028 Tetratricopeptide repeats AL538_17075 SM00267 diguanylate cyclase AL538_17095 SM00327 von Willebrand factor (vWF) type A domain AL538_17105 SM01276 AL538_17105 AL538_17165 SM00382 ATPases associated with a variety of cellular activities AL538_17185 SM00387 Histidine kinase-like ATPases AL538_17185 SM00388 His Kinase A (phosphoacceptor) domain AL538_17190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_17190 SM00448 cheY-homologous receiver domain AL538_17195 SM01266 AL538_17195 AL538_17205 SM00382 ATPases associated with a variety of cellular activities AL538_17215 SM00421 helix_turn_helix, Lux Regulon AL538_17220 SM00421 helix_turn_helix, Lux Regulon AL538_17230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_17230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_17250 SM00327 von Willebrand factor (vWF) type A domain AL538_17255 SM00028 Tetratricopeptide repeats AL538_17255 SM00327 von Willebrand factor (vWF) type A domain AL538_17265 SM00267 diguanylate cyclase AL538_17270 SM00382 ATPases associated with a variety of cellular activities AL538_17290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_17290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_17325 SM00487 DEAD-like helicases superfamily AL538_17325 SM00490 helicase superfamily c-terminal domain AL538_17335 SM00257 Lysin motif AL538_17345 SM00422 helix_turn_helix, mercury resistance AL538_17365 SM00028 Tetratricopeptide repeats AL538_17370 SM00267 diguanylate cyclase AL538_17395 SM00382 ATPases associated with a variety of cellular activities AL538_17410 SM00226 Low molecular weight phosphatase family AL538_17410 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_17430 SM00587 ZnF_C4 abd HLH domain containing kinases domain AL538_17445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_17445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_17450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_17450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_17465 SM00382 ATPases associated with a variety of cellular activities AL538_17510 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL538_17515 SM00838 Elongation factor G C-terminus AL538_17515 SM00889 Elongation factor G, domain IV AL538_17550 SM00382 ATPases associated with a variety of cellular activities AL538_17590 SM00062 Bacterial periplasmic substrate-binding proteins AL538_17635 SM00248 ankyrin repeats AL538_17640 SM01060 AL538_17640 AL538_17675 SM00354 helix_turn _helix lactose operon repressor AL538_17680 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_17680 SM01134 AL538_17680 AL538_17715 SM00861 Transketolase, pyrimidine binding domain AL538_17745 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_17745 SM01134 AL538_17745 AL538_17800 SM00450 Rhodanese Homology Domain AL538_17835 SM00382 ATPases associated with a variety of cellular activities AL538_17860 SM00382 ATPases associated with a variety of cellular activities AL538_17950 SM00342 helix_turn_helix, arabinose operon control protein AL538_17955 SM00342 helix_turn_helix, arabinose operon control protein AL538_17990 SM00387 Histidine kinase-like ATPases AL538_17990 SM00388 His Kinase A (phosphoacceptor) domain AL538_17995 SM00448 cheY-homologous receiver domain AL538_17995 SM00862 Transcriptional regulatory protein, C terminal AL538_18125 SM00342 helix_turn_helix, arabinose operon control protein AL538_18130 SM00642 Alpha-amylase domain AL538_18135 SM00936 Penicillin-binding protein 5, C-terminal domain AL538_18175 SM00450 Rhodanese Homology Domain AL538_18190 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AL538_18195 SM00903 Flavin reductase like domain AL538_18220 SM00226 Low molecular weight phosphatase family AL538_18315 SM00642 Alpha-amylase domain AL538_18325 SM00642 Alpha-amylase domain AL538_18340 SM00421 helix_turn_helix, Lux Regulon AL538_18450 SM00882 Coenzyme A transferase AL538_18455 SM00882 Coenzyme A transferase AL538_18470 SM00966 SpoVT / AbrB like domain AL538_18490 SM00671 Sel1-like repeats. AL538_18495 SM00642 Alpha-amylase domain AL538_18585 SM00382 ATPases associated with a variety of cellular activities AL538_18590 SM00382 ATPases associated with a variety of cellular activities AL538_18605 SM00342 helix_turn_helix, arabinose operon control protein AL538_18690 SM00052 Putative diguanylate phosphodiesterase AL538_18695 SM00342 helix_turn_helix, arabinose operon control protein AL538_18715 SM00495 Chitin-binding domain type 3 AL538_18720 SM00344 helix_turn_helix ASNC type AL538_18755 SM00829 Enoylreductase AL538_18780 SM00267 diguanylate cyclase AL538_18810 SM00354 helix_turn _helix lactose operon repressor AL538_18815 SM00382 ATPases associated with a variety of cellular activities AL538_18840 SM00354 helix_turn _helix lactose operon repressor AL538_18850 SM00267 diguanylate cyclase AL538_18870 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL538_18870 SM00495 Chitin-binding domain type 3 AL538_18870 SM00636 AL538_18870 AL538_18970 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_18970 SM01134 AL538_18970 AL538_18975 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_18975 SM01134 AL538_18975 AL538_18985 SM00382 ATPases associated with a variety of cellular activities AL538_19000 SM00342 helix_turn_helix, arabinose operon control protein AL538_19025 SM00342 helix_turn_helix, arabinose operon control protein AL538_19025 SM01009 AlkA N-terminal domain AL538_19075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL538_19085 SM01007 Class II Aldolase and Adducin N-terminal domain AL538_19100 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_19100 SM01134 AL538_19100 AL538_19110 SM01057 Eukaryotic-type carbonic anhydrase AL538_19125 SM00342 helix_turn_helix, arabinose operon control protein AL538_19165 SM00382 ATPases associated with a variety of cellular activities AL538_19170 SM00342 helix_turn_helix, arabinose operon control protein AL538_19190 SM00988 UreE urease accessory protein, N-terminal domain AL538_19215 SM00342 helix_turn_helix, arabinose operon control protein AL538_19230 SM00342 helix_turn_helix, arabinose operon control protein AL538_19255 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_19260 SM00382 ATPases associated with a variety of cellular activities AL538_19295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_19295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_19295 SM01049 AL538_19295 AL538_19305 SM00448 cheY-homologous receiver domain AL538_19305 SM00850 LytTr DNA-binding domain AL538_19310 SM00387 Histidine kinase-like ATPases AL538_19330 SM00382 ATPases associated with a variety of cellular activities AL538_19375 SM00387 Histidine kinase-like ATPases AL538_19375 SM00388 His Kinase A (phosphoacceptor) domain AL538_19375 SM00448 cheY-homologous receiver domain AL538_19400 SM00382 ATPases associated with a variety of cellular activities AL538_19405 SM00382 ATPases associated with a variety of cellular activities AL538_19425 SM00470 ParB-like nuclease domain AL538_19465 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL538_19470 SM00965 Secretin and TonB N terminus short domain AL538_19525 SM00382 ATPases associated with a variety of cellular activities AL538_19530 SM00052 Putative diguanylate phosphodiesterase AL538_19530 SM00267 diguanylate cyclase AL538_19545 SM00448 cheY-homologous receiver domain AL538_19550 SM00387 Histidine kinase-like ATPases AL538_19550 SM00388 His Kinase A (phosphoacceptor) domain AL538_19560 SM00421 helix_turn_helix, Lux Regulon AL538_19565 SM00342 helix_turn_helix, arabinose operon control protein AL538_19585 SM00422 helix_turn_helix, mercury resistance AL538_19595 SM00360 RNA recognition motif AL538_19620 SM00344 helix_turn_helix ASNC type AL538_19630 SM00382 ATPases associated with a variety of cellular activities AL538_19640 SM00479 AL538_19640 AL538_19645 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_19700 SM00342 helix_turn_helix, arabinose operon control protein AL538_19795 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_19795 SM00895 AL538_19795 AL538_19805 SM00530 Helix-turn-helix XRE-family like proteins AL538_19845 SM00487 DEAD-like helicases superfamily AL538_19845 SM00490 helicase superfamily c-terminal domain AL538_19875 SM00342 helix_turn_helix, arabinose operon control protein AL538_19880 SM00344 helix_turn_helix ASNC type AL538_19890 SM00342 helix_turn_helix, arabinose operon control protein AL538_19890 SM00871 Bacterial transcription activator, effector binding domain AL538_19895 SM00829 Enoylreductase AL538_19900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_19910 SM00342 helix_turn_helix, arabinose operon control protein AL538_19945 SM00642 Alpha-amylase domain AL538_19950 SM00642 Alpha-amylase domain AL538_19990 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_20010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_20010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_20065 SM00382 ATPases associated with a variety of cellular activities AL538_20115 SM00857 Resolvase, N terminal domain AL538_20150 SM00267 diguanylate cyclase AL538_20155 SM00642 Alpha-amylase domain AL538_20175 SM00642 Alpha-amylase domain AL538_20185 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_20210 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_20250 SM00822 AL538_20250 AL538_20270 SM00014 Acid phosphatase homologues AL538_20300 SM00382 ATPases associated with a variety of cellular activities AL538_20425 SM00487 DEAD-like helicases superfamily AL538_20425 SM00490 helicase superfamily c-terminal domain AL538_20455 SM00448 cheY-homologous receiver domain AL538_20455 SM00862 Transcriptional regulatory protein, C terminal AL538_20460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_20460 SM00387 Histidine kinase-like ATPases AL538_20460 SM00388 His Kinase A (phosphoacceptor) domain AL538_20535 SM00382 ATPases associated with a variety of cellular activities AL538_20575 SM00849 Metallo-beta-lactamase superfamily AL538_20620 SM00342 helix_turn_helix, arabinose operon control protein AL538_20640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL538_20640 SM00387 Histidine kinase-like ATPases AL538_20645 SM00382 ATPases associated with a variety of cellular activities AL538_20645 SM00448 cheY-homologous receiver domain AL538_20725 SM00267 diguanylate cyclase AL538_20725 SM01079 AL538_20725 AL538_20730 SM00530 Helix-turn-helix XRE-family like proteins AL538_20740 SM00267 diguanylate cyclase AL538_20770 SM01266 AL538_20770 AL538_20880 SM00354 helix_turn _helix lactose operon repressor AL538_20905 SM00382 ATPases associated with a variety of cellular activities AL538_20915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_20915 SM00866 AL538_20915 AL538_20945 SM00631 AL538_20945 AL538_21025 SM00858 AL538_21025 AL538_21120 SM00862 Transcriptional regulatory protein, C terminal AL538_21180 SM00382 ATPases associated with a variety of cellular activities AL538_21195 SM00900 AL538_21195 AL538_21215 SM00857 Resolvase, N terminal domain AL538_21235 SM00857 Resolvase, N terminal domain AL538_21260 SM00342 helix_turn_helix, arabinose operon control protein AL538_21375 SM00382 ATPases associated with a variety of cellular activities AL538_21400 SM00382 ATPases associated with a variety of cellular activities AL538_21410 SM00052 Putative diguanylate phosphodiesterase AL538_21415 SM00020 Trypsin-like serine protease AL538_21435 SM00481 DNA polymerase alpha chain like domain AL538_21475 SM00448 cheY-homologous receiver domain AL538_21475 SM00862 Transcriptional regulatory protein, C terminal AL538_21480 SM00388 His Kinase A (phosphoacceptor) domain AL538_21490 SM00062 Bacterial periplasmic substrate-binding proteins AL538_21495 SM00052 Putative diguanylate phosphodiesterase AL538_21495 SM00267 diguanylate cyclase AL538_21505 SM00829 Enoylreductase AL538_21530 SM00487 DEAD-like helicases superfamily AL538_21545 SM00482 DNA polymerase A domain AL538_21560 SM00487 DEAD-like helicases superfamily AL538_21560 SM00490 helicase superfamily c-terminal domain AL538_21595 SM01057 Eukaryotic-type carbonic anhydrase AL538_21600 SM00422 helix_turn_helix, mercury resistance AL538_21610 SM00028 Tetratricopeptide repeats AL538_21625 SM00155 Phospholipase D. Active site motifs. AL538_21705 SM00421 helix_turn_helix, Lux Regulon AL538_21715 SM00267 diguanylate cyclase AL538_21760 SM00886 Stress responsive A/B Barrel Domain AL538_21770 SM00421 helix_turn_helix, Lux Regulon AL538_21790 SM00870 AL538_21790 AL538_21795 SM00052 Putative diguanylate phosphodiesterase AL538_21800 SM00788 Adenylosuccinate synthetase AL538_21885 SM00849 Metallo-beta-lactamase superfamily AL538_21890 SM00487 DEAD-like helicases superfamily AL538_21890 SM00490 helicase superfamily c-terminal domain AL538_21935 SM00342 helix_turn_helix, arabinose operon control protein AL538_21935 SM00871 Bacterial transcription activator, effector binding domain AL538_21955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL538_21955 SM00382 ATPases associated with a variety of cellular activities AL538_21960 SM00849 Metallo-beta-lactamase superfamily AL538_22010 SM00342 helix_turn_helix, arabinose operon control protein AL538_22045 SM01060 AL538_22045 AL538_22055 SM00829 Enoylreductase AL538_22065 SM01022 AL538_22065 AL538_22125 SM00382 ATPases associated with a variety of cellular activities AL538_22200 SM00342 helix_turn_helix, arabinose operon control protein AL538_22300 SM00342 helix_turn_helix, arabinose operon control protein AL538_22325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_22325 SM00387 Histidine kinase-like ATPases AL538_22325 SM00388 His Kinase A (phosphoacceptor) domain AL538_22330 SM00448 cheY-homologous receiver domain AL538_22330 SM00862 Transcriptional regulatory protein, C terminal AL538_22350 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_22350 SM00895 AL538_22350 AL538_22365 SM01065 Starch binding domain AL538_22405 SM00563 Phosphate acyltransferases AL538_22415 SM00530 Helix-turn-helix XRE-family like proteins AL538_22420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_22445 SM00924 MgtE intracellular N domain AL538_22465 SM00342 helix_turn_helix, arabinose operon control protein AL538_22480 SM00448 cheY-homologous receiver domain AL538_22480 SM00862 Transcriptional regulatory protein, C terminal AL538_22485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_22485 SM00387 Histidine kinase-like ATPases AL538_22485 SM00388 His Kinase A (phosphoacceptor) domain AL538_22495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_22505 SM00344 helix_turn_helix ASNC type AL538_22530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL538_22535 SM00387 Histidine kinase-like ATPases AL538_22535 SM00388 His Kinase A (phosphoacceptor) domain AL538_22535 SM00448 cheY-homologous receiver domain AL538_22565 SM00465 GIY-YIG type nucleases (URI domain) AL538_22575 SM00387 Histidine kinase-like ATPases AL538_22575 SM00388 His Kinase A (phosphoacceptor) domain AL538_22575 SM00448 cheY-homologous receiver domain AL538_22590 SM00344 helix_turn_helix ASNC type AL538_22635 SM00822 AL538_22635 AL538_22670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL538_22685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_22685 SM00387 Histidine kinase-like ATPases AL538_22690 SM00421 helix_turn_helix, Lux Regulon AL538_22690 SM00448 cheY-homologous receiver domain AL538_22725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_22725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_22725 SM01358 AL538_22725 AL538_22740 SM00421 helix_turn_helix, Lux Regulon AL538_22790 SM01322 AL538_22790 AL538_22795 SM00357 Cold shock protein domain AL538_22810 SM00062 Bacterial periplasmic substrate-binding proteins AL538_22810 SM00267 diguanylate cyclase AL538_22830 SM00382 ATPases associated with a variety of cellular activities AL538_22850 SM00382 ATPases associated with a variety of cellular activities AL538_22855 SM00382 ATPases associated with a variety of cellular activities AL538_22865 SM00448 cheY-homologous receiver domain AL538_22890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_22890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_23035 SM00851 MGS-like domain AL538_23045 SM00073 Histidine Phosphotransfer domain AL538_23045 SM00387 Histidine kinase-like ATPases AL538_23045 SM00388 His Kinase A (phosphoacceptor) domain AL538_23045 SM00448 cheY-homologous receiver domain AL538_23065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_23065 SM00387 Histidine kinase-like ATPases AL538_23065 SM00388 His Kinase A (phosphoacceptor) domain AL538_23070 SM00448 cheY-homologous receiver domain AL538_23070 SM00862 Transcriptional regulatory protein, C terminal AL538_23085 SM00028 Tetratricopeptide repeats AL538_23120 SM00327 von Willebrand factor (vWF) type A domain AL538_23170 SM00382 ATPases associated with a variety of cellular activities AL538_23190 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL538_23220 SM00028 Tetratricopeptide repeats AL538_23225 SM00990 AL538_23225 AL538_23270 SM00387 Histidine kinase-like ATPases AL538_23270 SM00448 cheY-homologous receiver domain AL538_23290 SM00564 beta-propeller repeat AL538_23310 SM00382 ATPases associated with a variety of cellular activities AL538_23315 SM00382 ATPases associated with a variety of cellular activities AL538_23315 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_23350 SM00220 Serine/Threonine protein kinases, catalytic domain AL538_23385 SM00344 helix_turn_helix ASNC type AL538_23405 SM00240 Forkhead associated domain AL538_23445 SM00028 Tetratricopeptide repeats AL538_23515 SM00382 ATPases associated with a variety of cellular activities AL538_23530 SM00267 diguanylate cyclase AL538_23530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_23535 SM00062 Bacterial periplasmic substrate-binding proteins AL538_23535 SM00387 Histidine kinase-like ATPases AL538_23535 SM00388 His Kinase A (phosphoacceptor) domain AL538_23535 SM00448 cheY-homologous receiver domain AL538_23540 SM00052 Putative diguanylate phosphodiesterase AL538_23540 SM00448 cheY-homologous receiver domain AL538_23545 SM00421 helix_turn_helix, Lux Regulon AL538_23545 SM00448 cheY-homologous receiver domain AL538_23550 SM00267 diguanylate cyclase AL538_23560 SM00421 helix_turn_helix, Lux Regulon AL538_23560 SM00448 cheY-homologous receiver domain AL538_23565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_23565 SM01358 AL538_23565 AL538_23580 SM00260 Two component signalling adaptor domain AL538_23580 SM00448 cheY-homologous receiver domain AL538_23660 SM00422 helix_turn_helix, mercury resistance AL538_23695 SM00822 AL538_23695 AL538_23730 SM00014 Acid phosphatase homologues AL538_23770 SM00382 ATPases associated with a variety of cellular activities AL538_23795 SM00479 AL538_23795 AL538_23800 SM00028 Tetratricopeptide repeats AL538_23875 SM00530 Helix-turn-helix XRE-family like proteins AL538_23915 SM00862 Transcriptional regulatory protein, C terminal AL538_23940 SM00354 helix_turn _helix lactose operon repressor AL538_23955 SM00052 Putative diguanylate phosphodiesterase AL538_23965 SM00062 Bacterial periplasmic substrate-binding proteins AL538_23965 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL538_23975 SM00382 ATPases associated with a variety of cellular activities AL538_23990 SM00342 helix_turn_helix, arabinose operon control protein AL538_23995 SM00495 Chitin-binding domain type 3 AL538_23995 SM00636 AL538_23995 AL538_24025 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL538_24035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_24045 SM00487 DEAD-like helicases superfamily AL538_24045 SM00490 helicase superfamily c-terminal domain AL538_24050 SM00052 Putative diguanylate phosphodiesterase AL538_24070 SM00867 YceI-like domain AL538_24075 SM00116 Domain in cystathionine beta-synthase and other proteins. AL538_24120 SM00782 PhnA Zinc-Ribbon AL538_24185 SM00271 DnaJ molecular chaperone homology domain AL538_24195 SM00052 Putative diguanylate phosphodiesterase AL538_24195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL538_24195 SM00267 diguanylate cyclase AL538_24210 SM00382 ATPases associated with a variety of cellular activities AL538_24225 SM00797 Allophanate hydrolase subunit 2 AL538_24230 SM00796 Allophanate hydrolase subunit 1 AL538_24240 SM00091 PAS domain AL538_24240 SM00267 diguanylate cyclase AL538_24240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_24265 SM00881 CoA binding domain AL538_24325 SM00448 cheY-homologous receiver domain AL538_24325 SM00862 Transcriptional regulatory protein, C terminal AL538_24330 SM00387 Histidine kinase-like ATPases AL538_24330 SM00388 His Kinase A (phosphoacceptor) domain AL538_24340 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL538_24340 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL538_24355 SM00267 diguanylate cyclase AL538_24370 SM00267 diguanylate cyclase AL538_24370 SM00448 cheY-homologous receiver domain AL538_24380 SM00382 ATPases associated with a variety of cellular activities AL538_24420 SM00342 helix_turn_helix, arabinose operon control protein AL538_24455 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_24460 SM00450 Rhodanese Homology Domain AL538_24485 SM00342 helix_turn_helix, arabinose operon control protein AL538_24495 SM00421 helix_turn_helix, Lux Regulon AL538_24495 SM00448 cheY-homologous receiver domain AL538_24500 SM00387 Histidine kinase-like ATPases AL538_24535 SM00342 helix_turn_helix, arabinose operon control protein AL538_24570 SM00342 helix_turn_helix, arabinose operon control protein AL538_24640 SM00267 diguanylate cyclase AL538_24695 SM00642 Alpha-amylase domain AL538_24735 SM00382 ATPases associated with a variety of cellular activities AL538_24770 SM00342 helix_turn_helix, arabinose operon control protein AL538_24805 SM00495 Chitin-binding domain type 3 AL538_24805 SM00636 AL538_24805 AL538_24865 SM00382 ATPases associated with a variety of cellular activities AL538_24865 SM01086 C-terminal, D2-small domain, of ClpB protein AL538_24910 SM00331 Sigma factor PP2C-like phosphatases AL538_24910 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL538_24940 SM00240 Forkhead associated domain AL538_24945 SM00220 Serine/Threonine protein kinases, catalytic domain AL538_24950 SM00448 cheY-homologous receiver domain AL538_24990 SM00953 AL538_24990 AL538_25000 SM00704 CDGSH-type zinc finger. Function unknown. AL538_25010 SM00849 Metallo-beta-lactamase superfamily AL538_25020 SM00710 Parallel beta-helix repeats AL538_25070 SM00342 helix_turn_helix, arabinose operon control protein AL538_25090 SM00267 diguanylate cyclase AL538_25090 SM01079 AL538_25090 AL538_25105 SM01266 AL538_25105 AL538_25115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_25115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_25120 SM00867 YceI-like domain AL538_25130 SM00636 AL538_25130 AL538_25155 SM00331 Sigma factor PP2C-like phosphatases AL538_25155 SM00448 cheY-homologous receiver domain AL538_25190 SM00382 ATPases associated with a variety of cellular activities AL538_25205 SM01012 AL538_25205 AL538_25225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL538_25235 SM00052 Putative diguanylate phosphodiesterase AL538_25245 SM00028 Tetratricopeptide repeats AL538_25245 SM00267 diguanylate cyclase AL538_25265 SM00098 Alkaline phosphatase homologues AL538_25270 SM00871 Bacterial transcription activator, effector binding domain AL538_25275 SM00388 His Kinase A (phosphoacceptor) domain AL538_25280 SM00448 cheY-homologous receiver domain AL538_25280 SM00862 Transcriptional regulatory protein, C terminal AL538_25335 SM00861 Transketolase, pyrimidine binding domain AL538_25345 SM00893 Electron transfer flavoprotein domain AL538_25350 SM00893 Electron transfer flavoprotein domain AL538_25370 SM00900 AL538_25370 AL538_25375 SM00387 Histidine kinase-like ATPases AL538_25380 SM00448 cheY-homologous receiver domain AL538_25380 SM00862 Transcriptional regulatory protein, C terminal AL538_25420 SM00062 Bacterial periplasmic substrate-binding proteins AL538_25420 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL538_25425 SM00382 ATPases associated with a variety of cellular activities AL538_25430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_25490 SM00487 DEAD-like helicases superfamily AL538_25490 SM00490 helicase superfamily c-terminal domain AL538_25495 SM00316 Ribosomal protein S1-like RNA-binding domain AL538_25495 SM00357 Cold shock protein domain AL538_25495 SM00955 AL538_25495 AL538_25500 SM00342 helix_turn_helix, arabinose operon control protein AL538_25565 SM00857 Resolvase, N terminal domain AL538_25570 SM00530 Helix-turn-helix XRE-family like proteins AL538_25580 SM00387 Histidine kinase-like ATPases AL538_25580 SM00388 His Kinase A (phosphoacceptor) domain AL538_25585 SM00448 cheY-homologous receiver domain AL538_25585 SM00862 Transcriptional regulatory protein, C terminal AL538_25605 SM00382 ATPases associated with a variety of cellular activities AL538_25610 SM00052 Putative diguanylate phosphodiesterase AL538_25630 SM00487 DEAD-like helicases superfamily AL538_25630 SM00490 helicase superfamily c-terminal domain AL538_25635 SM00267 diguanylate cyclase AL538_25670 SM00342 helix_turn_helix, arabinose operon control protein AL538_25675 SM00422 helix_turn_helix, mercury resistance AL538_25680 SM00382 ATPases associated with a variety of cellular activities AL538_25720 SM00354 helix_turn _helix lactose operon repressor AL538_25740 SM00382 ATPases associated with a variety of cellular activities AL538_25750 SM00052 Putative diguanylate phosphodiesterase AL538_25750 SM00267 diguanylate cyclase AL538_25830 SM00387 Histidine kinase-like ATPases AL538_25830 SM00388 His Kinase A (phosphoacceptor) domain AL538_25830 SM00448 cheY-homologous receiver domain AL538_25840 SM00062 Bacterial periplasmic substrate-binding proteins AL538_25840 SM00387 Histidine kinase-like ATPases AL538_25840 SM00388 His Kinase A (phosphoacceptor) domain AL538_25840 SM00448 cheY-homologous receiver domain AL538_25845 SM00052 Putative diguanylate phosphodiesterase AL538_25845 SM00448 cheY-homologous receiver domain AL538_25850 SM00448 cheY-homologous receiver domain AL538_25860 SM00244 prohibitin homologues AL538_25875 SM00382 ATPases associated with a variety of cellular activities AL538_25910 SM00267 diguanylate cyclase AL538_25935 SM00563 Phosphate acyltransferases AL538_25985 SM00028 Tetratricopeptide repeats AL538_26000 SM00382 ATPases associated with a variety of cellular activities AL538_26045 SM01240 AL538_26045 AL538_26060 SM00448 cheY-homologous receiver domain AL538_26100 SM00852 Probable molybdopterin binding domain AL538_26120 SM00450 Rhodanese Homology Domain AL538_26125 SM00052 Putative diguanylate phosphodiesterase AL538_26125 SM00267 diguanylate cyclase AL538_26130 SM00636 AL538_26130 AL538_26145 SM00861 Transketolase, pyrimidine binding domain AL538_26150 SM00091 PAS domain AL538_26150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_26230 SM00342 helix_turn_helix, arabinose operon control protein AL538_26285 SM00052 Putative diguanylate phosphodiesterase AL538_26285 SM00267 diguanylate cyclase AL538_26310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_26310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL538_26330 SM00530 Helix-turn-helix XRE-family like proteins AL538_26340 SM00481 DNA polymerase alpha chain like domain AL538_26370 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL538_26370 SM00866 AL538_26370 AL538_26380 SM00872 Alpha mannosidase, middle domain AL538_26410 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_26425 SM00342 helix_turn_helix, arabinose operon control protein AL538_26475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL538_26495 SM00822 AL538_26495 AL538_26500 SM00829 Enoylreductase AL538_26505 SM00642 Alpha-amylase domain AL538_26525 SM00260 Two component signalling adaptor domain AL538_26525 SM00448 cheY-homologous receiver domain AL538_26545 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_26575 SM00382 ATPases associated with a variety of cellular activities AL538_26580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL538_26590 SM00382 ATPases associated with a variety of cellular activities AL538_26640 SM01119 AL538_26640 AL538_26660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL538_26700 SM00829 Enoylreductase AL538_26720 SM00422 helix_turn_helix, mercury resistance AL538_26790 SM01235 AL538_26790 AL538_26810 SM00382 ATPases associated with a variety of cellular activities AL538_26845 SM00849 Metallo-beta-lactamase superfamily AL538_26865 SM00420 helix_turn_helix, Deoxyribose operon repressor AL538_26865 SM01134 AL538_26865 AL538_26890 SM00382 ATPases associated with a variety of cellular activities AL538_26905 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_26950 SM00357 Cold shock protein domain AL538_26970 SM00267 diguanylate cyclase AL538_27005 SM00028 Tetratricopeptide repeats AL538_27005 SM00267 diguanylate cyclase AL538_27010 SM00936 Penicillin-binding protein 5, C-terminal domain AL538_27065 SM00822 AL538_27065 AL538_27340 SM00729 Elongator protein 3, MiaB family, Radical SAM AL538_27355 SM00495 Chitin-binding domain type 3 AL538_27365 SM00052 Putative diguanylate phosphodiesterase AL538_27370 SM00052 Putative diguanylate phosphodiesterase AL538_27840 SM00507 HNH nucleases AL538_28075 SM00347 helix_turn_helix multiple antibiotic resistance protein AL538_28175 SM01234 AL538_28175 AL538_28470 SM01234 AL538_28470 AL538_28495 SM01234 AL538_28495